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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:ZFP36L1-DAGLB (FusionGDB2 ID:100365) |
Fusion Gene Summary for ZFP36L1-DAGLB |
Fusion gene summary |
Fusion gene information | Fusion gene name: ZFP36L1-DAGLB | Fusion gene ID: 100365 | Hgene | Tgene | Gene symbol | ZFP36L1 | DAGLB | Gene ID | 677 | 221955 |
Gene name | ZFP36 ring finger protein like 1 | diacylglycerol lipase beta | |
Synonyms | BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 | DAGLBETA|KCCR13L | |
Cytomap | 14q24.1 | 7p22.1 | |
Type of gene | protein-coding | protein-coding | |
Description | mRNA decay activator protein ZFP36L1EGF-response factor 1TPA-induced sequence 11bZFP36-like 1butyrate response factor 1early response factor Berg36zinc finger protein 36, C3H type-like 1zinc finger protein 36, C3H1 type-like 1zinc finger protein, | sn1-specific diacylglycerol lipase betaDGL-beta | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | Q07352 | Q8NCG7 | |
Ensembl transtripts involved in fusion gene | ENST00000555997, ENST00000439696, ENST00000336440, ENST00000408913, | ENST00000297056, ENST00000425398, ENST00000436575, ENST00000428902, ENST00000421761, ENST00000479922, | |
Fusion gene scores | * DoF score | 12 X 11 X 4=528 | 4 X 4 X 3=48 |
# samples | 12 | 4 | |
** MAII score | log2(12/528*10)=-2.13750352374993 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(4/48*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: ZFP36L1 [Title/Abstract] AND DAGLB [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | ZFP36L1(69259598)-DAGLB(6450011), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | ZFP36L1 | GO:0000165 | MAPK cascade | 18326031|20166898 |
Hgene | ZFP36L1 | GO:0009611 | response to wounding | 27182009 |
Hgene | ZFP36L1 | GO:0010468 | regulation of gene expression | 20166898 |
Hgene | ZFP36L1 | GO:0014065 | phosphatidylinositol 3-kinase signaling | 15538381 |
Hgene | ZFP36L1 | GO:0031440 | regulation of mRNA 3'-end processing | 21832157 |
Hgene | ZFP36L1 | GO:0032869 | cellular response to insulin stimulus | 15538381 |
Hgene | ZFP36L1 | GO:0043488 | regulation of mRNA stability | 15467755|15538381|15687258|18326031|19179481|20702587|24700863|25014217|26542173 |
Hgene | ZFP36L1 | GO:0045647 | negative regulation of erythrocyte differentiation | 20702587 |
Hgene | ZFP36L1 | GO:0045657 | positive regulation of monocyte differentiation | 26542173 |
Hgene | ZFP36L1 | GO:0061158 | 3'-UTR-mediated mRNA destabilization | 15467755|15538381|15687258|18326031|19179481|24700863|26542173 |
Hgene | ZFP36L1 | GO:0070371 | ERK1 and ERK2 cascade | 25106868 |
Hgene | ZFP36L1 | GO:0071320 | cellular response to cAMP | 19179481 |
Hgene | ZFP36L1 | GO:0071356 | cellular response to tumor necrosis factor | 20166898 |
Hgene | ZFP36L1 | GO:0071364 | cellular response to epidermal growth factor stimulus | 20166898 |
Hgene | ZFP36L1 | GO:0071375 | cellular response to peptide hormone stimulus | 15467755|19179481 |
Hgene | ZFP36L1 | GO:0071385 | cellular response to glucocorticoid stimulus | 20166898 |
Hgene | ZFP36L1 | GO:0071560 | cellular response to transforming growth factor beta stimulus | 20166898 |
Tgene | DAGLB | GO:0019369 | arachidonic acid metabolic process | 14610053 |
Fusion gene breakpoints across ZFP36L1 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across DAGLB (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | ESCA | TCGA-L5-A88W | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - |
ChimerDB4 | ESCA | TCGA-L5-A88W | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - |
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Fusion Gene ORF analysis for ZFP36L1-DAGLB |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-3CDS | ENST00000555997 | ENST00000297056 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - |
intron-3CDS | ENST00000555997 | ENST00000425398 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - |
intron-3CDS | ENST00000555997 | ENST00000436575 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - |
intron-3UTR | ENST00000555997 | ENST00000428902 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - |
intron-intron | ENST00000555997 | ENST00000421761 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - |
intron-intron | ENST00000555997 | ENST00000479922 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - |
In-frame | ENST00000439696 | ENST00000297056 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - |
In-frame | ENST00000439696 | ENST00000425398 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - |
In-frame | ENST00000439696 | ENST00000436575 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - |
5CDS-3UTR | ENST00000439696 | ENST00000428902 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - |
5CDS-intron | ENST00000439696 | ENST00000421761 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - |
5CDS-intron | ENST00000439696 | ENST00000479922 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - |
In-frame | ENST00000336440 | ENST00000297056 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - |
In-frame | ENST00000336440 | ENST00000425398 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - |
In-frame | ENST00000336440 | ENST00000436575 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - |
5CDS-3UTR | ENST00000336440 | ENST00000428902 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - |
5CDS-intron | ENST00000336440 | ENST00000421761 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - |
5CDS-intron | ENST00000336440 | ENST00000479922 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - |
intron-3CDS | ENST00000408913 | ENST00000297056 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - |
intron-3CDS | ENST00000408913 | ENST00000425398 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - |
intron-3CDS | ENST00000408913 | ENST00000436575 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - |
intron-3UTR | ENST00000408913 | ENST00000428902 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - |
intron-intron | ENST00000408913 | ENST00000421761 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - |
intron-intron | ENST00000408913 | ENST00000479922 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000439696 | ZFP36L1 | chr14 | 69259598 | - | ENST00000297056 | DAGLB | chr7 | 6450011 | - | 1517 | 359 | 302 | 808 | 168 |
ENST00000439696 | ZFP36L1 | chr14 | 69259598 | - | ENST00000425398 | DAGLB | chr7 | 6450011 | - | 1129 | 359 | 302 | 808 | 168 |
ENST00000439696 | ZFP36L1 | chr14 | 69259598 | - | ENST00000436575 | DAGLB | chr7 | 6450011 | - | 1046 | 359 | 302 | 808 | 168 |
ENST00000336440 | ZFP36L1 | chr14 | 69259598 | - | ENST00000297056 | DAGLB | chr7 | 6450011 | - | 3013 | 1855 | 1798 | 2304 | 168 |
ENST00000336440 | ZFP36L1 | chr14 | 69259598 | - | ENST00000425398 | DAGLB | chr7 | 6450011 | - | 2625 | 1855 | 1798 | 2304 | 168 |
ENST00000336440 | ZFP36L1 | chr14 | 69259598 | - | ENST00000436575 | DAGLB | chr7 | 6450011 | - | 2542 | 1855 | 1798 | 2304 | 168 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000439696 | ENST00000297056 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - | 0.07451538 | 0.9254846 |
ENST00000439696 | ENST00000425398 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - | 0.0521076 | 0.9478924 |
ENST00000439696 | ENST00000436575 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - | 0.042889077 | 0.9571109 |
ENST00000336440 | ENST00000297056 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - | 0.09222474 | 0.9077753 |
ENST00000336440 | ENST00000425398 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - | 0.078593925 | 0.9214061 |
ENST00000336440 | ENST00000436575 | ZFP36L1 | chr14 | 69259598 | - | DAGLB | chr7 | 6450011 | - | 0.07062348 | 0.9293765 |
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Fusion Genomic Features for ZFP36L1-DAGLB |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for ZFP36L1-DAGLB |
Go to FGviewer for the breakpoints of chr14:69259598-chr7:6450011 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
ZFP36L1 | DAGLB |
FUNCTION: Zinc-finger RNA-binding protein that destabilizes several cytoplasmic AU-rich element (ARE)-containing mRNA transcripts by promoting their poly(A) tail removal or deadenylation, and hence provide a mechanism for attenuating protein synthesis (PubMed:12198173, PubMed:15538381, PubMed:15467755, PubMed:17030608, PubMed:19179481, PubMed:20702587, PubMed:24700863, PubMed:25106868, PubMed:25014217, PubMed:26542173). Acts as a 3'-untranslated region (UTR) ARE mRNA-binding adapter protein to communicate signaling events to the mRNA decay machinery (PubMed:15687258). Functions by recruiting the CCR4-NOT deadenylase complex and components of the cytoplasmic RNA decay machinery to the bound ARE-containing mRNAs, and hence promotes ARE-mediated mRNA deadenylation and decay processes (PubMed:15687258, PubMed:18326031, PubMed:25106868). Induces also the degradation of ARE-containing mRNAs even in absence of poly(A) tail (By similarity). Binds to 3'-UTR ARE of numerous mRNAs (PubMed:12198173, PubMed:15538381, PubMed:15467755, PubMed:17030608, PubMed:19179481, PubMed:20702587, PubMed:24700863, PubMed:25106868, PubMed:25014217, PubMed:26542173). Positively regulates early adipogenesis by promoting ARE-mediated mRNA decay of immediate early genes (IEGs) (By similarity). Promotes ARE-mediated mRNA decay of mineralocorticoid receptor NR3C2 mRNA in response to hypertonic stress (PubMed:24700863). Negatively regulates hematopoietic/erythroid cell differentiation by promoting ARE-mediated mRNA decay of the transcription factor STAT5B mRNA (PubMed:20702587). Positively regulates monocyte/macrophage cell differentiation by promoting ARE-mediated mRNA decay of the cyclin-dependent kinase CDK6 mRNA (PubMed:26542173). Promotes degradation of ARE-containing pluripotency-associated mRNAs in embryonic stem cells (ESCs), such as NANOG, through a fibroblast growth factor (FGF)-induced MAPK-dependent signaling pathway, and hence attenuates ESC self-renewal and positively regulates mesendoderm differentiation (By similarity). May play a role in mediating pro-apoptotic effects in malignant B-cells by promoting ARE-mediated mRNA decay of BCL2 mRNA (PubMed:25014217). In association with ZFP36L2 maintains quiescence on developing B lymphocytes by promoting ARE-mediated decay of several mRNAs encoding cell cycle regulators that help B cells progress through the cell cycle, and hence ensuring accurate variable-diversity-joining (VDJ) recombination and functional immune cell formation (By similarity). Together with ZFP36L2 is also necessary for thymocyte development and prevention of T-cell acute lymphoblastic leukemia (T-ALL) transformation by promoting ARE-mediated mRNA decay of the oncogenic transcription factor NOTCH1 mRNA (By similarity). Participates in the delivery of target ARE-mRNAs to processing bodies (PBs) (PubMed:17369404). In addition to its cytosolic mRNA-decay function, plays a role in the regulation of nuclear mRNA 3'-end processing; modulates mRNA 3'-end maturation efficiency of the DLL4 mRNA through binding with an ARE embedded in a weak noncanonical polyadenylation (poly(A)) signal in endothelial cells (PubMed:21832157). Also involved in the regulation of stress granule (SG) and P-body (PB) formation and fusion (PubMed:15967811). Plays a role in vasculogenesis and endocardial development (By similarity). Plays a role in the regulation of keratinocyte proliferation, differentiation and apoptosis (PubMed:27182009). Plays a role in myoblast cell differentiation (By similarity). {ECO:0000250|UniProtKB:P17431, ECO:0000250|UniProtKB:P23950, ECO:0000269|PubMed:12198173, ECO:0000269|PubMed:15467755, ECO:0000269|PubMed:15538381, ECO:0000269|PubMed:15687258, ECO:0000269|PubMed:15967811, ECO:0000269|PubMed:17030608, ECO:0000269|PubMed:17369404, ECO:0000269|PubMed:18326031, ECO:0000269|PubMed:19179481, ECO:0000269|PubMed:20702587, ECO:0000269|PubMed:21832157, ECO:0000269|PubMed:24700863, ECO:0000269|PubMed:25014217, ECO:0000269|PubMed:25106868, ECO:0000269|PubMed:26542173, ECO:0000269|PubMed:27182009}. | FUNCTION: Lipase that catalyzes the hydrolysis of arachidonic acid (AA)-esterified diacylglycerols (DAGs) to produce the principal endocannabinoid, 2-arachidonoylglycerol (2-AG) which can be further cleaved by downstream enzymes to release arachidonic acid (AA) for cyclooxygenase (COX)-mediated eicosanoid production (PubMed:14610053). Preferentially hydrolyzes DAGs at the sn-1 position in a calcium-dependent manner and has negligible activity against other lipids including monoacylglycerols and phospholipids (PubMed:14610053). Plays a key role in the regulation of 2-AG and AA pools utilized by COX1/2 to generate lipid mediators of macrophage and microglia inflammatory responses. Functions also as a polyunsaturated fatty acids-specific triacylglycerol lipase in macrophages. Plays an important role to support the metabolic and signaling demands of macrophages (By similarity). {ECO:0000250|UniProtKB:Q91WC9, ECO:0000269|PubMed:14610053}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ZFP36L1 | chr14:69259598 | chr7:6450011 | ENST00000336440 | - | 1 | 3 | 307_316 | 19.0 | -211.0 | Compositional bias | Note=Poly-Ser |
Hgene | ZFP36L1 | chr14:69259598 | chr7:6450011 | ENST00000336440 | - | 1 | 3 | 185_338 | 19.0 | -211.0 | Region | Necessary for mRNA decay activation |
Hgene | ZFP36L1 | chr14:69259598 | chr7:6450011 | ENST00000336440 | - | 1 | 3 | 1_111 | 19.0 | -211.0 | Region | Necessary and sufficient for the association with mRNA decay enzymes and mRNA decay activation |
Hgene | ZFP36L1 | chr14:69259598 | chr7:6450011 | ENST00000336440 | - | 1 | 3 | 114_142 | 19.0 | -211.0 | Zinc finger | C3H1-type 1 |
Hgene | ZFP36L1 | chr14:69259598 | chr7:6450011 | ENST00000336440 | - | 1 | 3 | 152_180 | 19.0 | -211.0 | Zinc finger | C3H1-type 2 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ZFP36L1 | chr14:69259598 | chr7:6450011 | ENST00000439696 | - | 1 | 2 | 307_316 | 19.0 | 339.0 | Compositional bias | Note=Poly-Ser |
Hgene | ZFP36L1 | chr14:69259598 | chr7:6450011 | ENST00000439696 | - | 1 | 2 | 185_338 | 19.0 | 339.0 | Region | Necessary for mRNA decay activation |
Hgene | ZFP36L1 | chr14:69259598 | chr7:6450011 | ENST00000439696 | - | 1 | 2 | 1_111 | 19.0 | 339.0 | Region | Necessary and sufficient for the association with mRNA decay enzymes and mRNA decay activation |
Hgene | ZFP36L1 | chr14:69259598 | chr7:6450011 | ENST00000439696 | - | 1 | 2 | 114_142 | 19.0 | 339.0 | Zinc finger | C3H1-type 1 |
Hgene | ZFP36L1 | chr14:69259598 | chr7:6450011 | ENST00000439696 | - | 1 | 2 | 152_180 | 19.0 | 339.0 | Zinc finger | C3H1-type 2 |
Tgene | DAGLB | chr14:69259598 | chr7:6450011 | ENST00000297056 | 12 | 15 | 124_132 | 523.0 | 673.0 | Topological domain | Extracellular | |
Tgene | DAGLB | chr14:69259598 | chr7:6450011 | ENST00000297056 | 12 | 15 | 154_672 | 523.0 | 673.0 | Topological domain | Cytoplasmic | |
Tgene | DAGLB | chr14:69259598 | chr7:6450011 | ENST00000297056 | 12 | 15 | 1_17 | 523.0 | 673.0 | Topological domain | Cytoplasmic | |
Tgene | DAGLB | chr14:69259598 | chr7:6450011 | ENST00000297056 | 12 | 15 | 39_58 | 523.0 | 673.0 | Topological domain | Extracellular | |
Tgene | DAGLB | chr14:69259598 | chr7:6450011 | ENST00000297056 | 12 | 15 | 80_102 | 523.0 | 673.0 | Topological domain | Cytoplasmic | |
Tgene | DAGLB | chr14:69259598 | chr7:6450011 | ENST00000425398 | 10 | 13 | 124_132 | 394.0 | 544.0 | Topological domain | Extracellular | |
Tgene | DAGLB | chr14:69259598 | chr7:6450011 | ENST00000425398 | 10 | 13 | 154_672 | 394.0 | 544.0 | Topological domain | Cytoplasmic | |
Tgene | DAGLB | chr14:69259598 | chr7:6450011 | ENST00000425398 | 10 | 13 | 1_17 | 394.0 | 544.0 | Topological domain | Cytoplasmic | |
Tgene | DAGLB | chr14:69259598 | chr7:6450011 | ENST00000425398 | 10 | 13 | 39_58 | 394.0 | 544.0 | Topological domain | Extracellular | |
Tgene | DAGLB | chr14:69259598 | chr7:6450011 | ENST00000425398 | 10 | 13 | 80_102 | 394.0 | 544.0 | Topological domain | Cytoplasmic | |
Tgene | DAGLB | chr14:69259598 | chr7:6450011 | ENST00000297056 | 12 | 15 | 103_123 | 523.0 | 673.0 | Transmembrane | Helical | |
Tgene | DAGLB | chr14:69259598 | chr7:6450011 | ENST00000297056 | 12 | 15 | 133_153 | 523.0 | 673.0 | Transmembrane | Helical | |
Tgene | DAGLB | chr14:69259598 | chr7:6450011 | ENST00000297056 | 12 | 15 | 18_38 | 523.0 | 673.0 | Transmembrane | Helical | |
Tgene | DAGLB | chr14:69259598 | chr7:6450011 | ENST00000297056 | 12 | 15 | 59_79 | 523.0 | 673.0 | Transmembrane | Helical | |
Tgene | DAGLB | chr14:69259598 | chr7:6450011 | ENST00000425398 | 10 | 13 | 103_123 | 394.0 | 544.0 | Transmembrane | Helical | |
Tgene | DAGLB | chr14:69259598 | chr7:6450011 | ENST00000425398 | 10 | 13 | 133_153 | 394.0 | 544.0 | Transmembrane | Helical | |
Tgene | DAGLB | chr14:69259598 | chr7:6450011 | ENST00000425398 | 10 | 13 | 18_38 | 394.0 | 544.0 | Transmembrane | Helical | |
Tgene | DAGLB | chr14:69259598 | chr7:6450011 | ENST00000425398 | 10 | 13 | 59_79 | 394.0 | 544.0 | Transmembrane | Helical |
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Fusion Gene Sequence for ZFP36L1-DAGLB |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000439696_ENST00000297056_TCGA-L5-A88W_ZFP36L1_chr14_69259598_-_DAGLB_chr7_6450011_length(transcript)=1517nt_BP=359nt GTTTCTTCTCCTCCCCCTGCCCCCCCTCCCCGCCTGACCGCATGGCTGATTCAACTCCAGTGTCAATCAACTTCTTTTTCCTCCTCTTCC TCATTTAAATAAGTTTAAAGCTCCTCCTCCCCCCGGCCCACCAAATCTGAACTTTATAAATTGGGCTTTGCGCGCCCCAGCCCGGAGTCA GAAAGGCGAGGGGCGCCGGGAACTGGCGTGTGGGACTCCAGACAGGAGAGGCTGCGCCTTCCCCGCACCGGGACCTTCGCGACACACCAG ATCCTCGCCCCTGGCTCGCGCGAACGCACAGGATGACCACCACCCTCGTGTCTGCCACCATCTTCGACTTGAGCGAAGTTTTATGCAAGT ACAAGATCTTGCTGCACGGTTTGTGGTACGAACTGTTTGGAGGAAACCCCAACAACTTGCCCACGGAGCTGGACGGGGGCGACCAGGAAG TCCTGACACAGCCTCTTCTGGGGGAGCAGAGCCTACTGACGCGCTGGTCCCCGGCCTACAGCTTCTCCAGCGACTCCCCACTGGACTCTT CTCCCAAGTACCCCCCTCTCTACCCTCCCGGCAGGATCATCCACCTGCAGGAGGAGGGCGCCTCGGGGCGGTTTGGCTGCTGCTCTGCTG CTCACTATAGCGCCAAGTGGTCACACGAAGCGGAATTCAGCAAAATACTCATAGGTCCGAAGATGCTCACCGACCACATGCCAGACATCC TGATGCGGGCCTTGGACAGCGTGGTCTCCGACAGAGCGGCCTGCGTCTCCTGTCCAGCACAAGGGGTCTCCAGTGTGGACGTGGCCTGAC CAGGGCCACTGGAAACTGTCCCAGGAACGATGGACTCACGCTTTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAA ACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGCCATAAT GGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAGGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAGCCCTGGCCCGTG GATGGATCCCTTGGCTGTCTGAGGACTGCTCCAGAAGTGCGGGAATCCAGGGCCCACCCAGAAGACCGTGAACAGTTCCTTAGCCTCCCA CCCCCAAGGCAGCTCTTTTCATCCAACTCAGTTTACAGGCGTGGTTTGTTTTTCAAACTGGGCTTCCTGGATGTACAAATGGAACTGTGG TGAGGGTGCGGGCTGGGGTTTTCTCCTGGGCGTCACCAAGGGCAGCCCTGGGCTCTGGCTGGGGATGAAGACGAAACCCGATCGGGAAAG TAAGTGGAGCCCCCGGCCCCGCCGAGCCACAGCCCCCCAACTGCCTATTCCCACTGCCCAGTTGTTTGTCCACATCAGGAGTTGCTGATT >In-frame_ENST00000439696_ENST00000297056_TCGA-L5-A88W_ZFP36L1_chr14_69259598_-_DAGLB_chr7_6450011_length(amino acids)=168AA_start in transcript=302_stop in transcript=808 MTTTLVSATIFDLSEVLCKYKILLHGLWYELFGGNPNNLPTELDGGDQEVLTQPLLGEQSLLTRWSPAYSFSSDSPLDSSPKYPPLYPPG -------------------------------------------------------------- >In-frame_ENST00000439696_ENST00000425398_TCGA-L5-A88W_ZFP36L1_chr14_69259598_-_DAGLB_chr7_6450011_length(transcript)=1129nt_BP=359nt GTTTCTTCTCCTCCCCCTGCCCCCCCTCCCCGCCTGACCGCATGGCTGATTCAACTCCAGTGTCAATCAACTTCTTTTTCCTCCTCTTCC TCATTTAAATAAGTTTAAAGCTCCTCCTCCCCCCGGCCCACCAAATCTGAACTTTATAAATTGGGCTTTGCGCGCCCCAGCCCGGAGTCA GAAAGGCGAGGGGCGCCGGGAACTGGCGTGTGGGACTCCAGACAGGAGAGGCTGCGCCTTCCCCGCACCGGGACCTTCGCGACACACCAG ATCCTCGCCCCTGGCTCGCGCGAACGCACAGGATGACCACCACCCTCGTGTCTGCCACCATCTTCGACTTGAGCGAAGTTTTATGCAAGT ACAAGATCTTGCTGCACGGTTTGTGGTACGAACTGTTTGGAGGAAACCCCAACAACTTGCCCACGGAGCTGGACGGGGGCGACCAGGAAG TCCTGACACAGCCTCTTCTGGGGGAGCAGAGCCTACTGACGCGCTGGTCCCCGGCCTACAGCTTCTCCAGCGACTCCCCACTGGACTCTT CTCCCAAGTACCCCCCTCTCTACCCTCCCGGCAGGATCATCCACCTGCAGGAGGAGGGCGCCTCGGGGCGGTTTGGCTGCTGCTCTGCTG CTCACTATAGCGCCAAGTGGTCACACGAAGCGGAATTCAGCAAAATACTCATAGGTCCGAAGATGCTCACCGACCACATGCCAGACATCC TGATGCGGGCCTTGGACAGCGTGGTCTCCGACAGAGCGGCCTGCGTCTCCTGTCCAGCACAAGGGGTCTCCAGTGTGGACGTGGCCTGAC CAGGGCCACTGGAAACTGTCCCAGGAACGATGGACTCACGCTTTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAA ACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGCCATAAT GGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAGGACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAGCCCTGGCCCGTG >In-frame_ENST00000439696_ENST00000425398_TCGA-L5-A88W_ZFP36L1_chr14_69259598_-_DAGLB_chr7_6450011_length(amino acids)=168AA_start in transcript=302_stop in transcript=808 MTTTLVSATIFDLSEVLCKYKILLHGLWYELFGGNPNNLPTELDGGDQEVLTQPLLGEQSLLTRWSPAYSFSSDSPLDSSPKYPPLYPPG -------------------------------------------------------------- >In-frame_ENST00000439696_ENST00000436575_TCGA-L5-A88W_ZFP36L1_chr14_69259598_-_DAGLB_chr7_6450011_length(transcript)=1046nt_BP=359nt GTTTCTTCTCCTCCCCCTGCCCCCCCTCCCCGCCTGACCGCATGGCTGATTCAACTCCAGTGTCAATCAACTTCTTTTTCCTCCTCTTCC TCATTTAAATAAGTTTAAAGCTCCTCCTCCCCCCGGCCCACCAAATCTGAACTTTATAAATTGGGCTTTGCGCGCCCCAGCCCGGAGTCA GAAAGGCGAGGGGCGCCGGGAACTGGCGTGTGGGACTCCAGACAGGAGAGGCTGCGCCTTCCCCGCACCGGGACCTTCGCGACACACCAG ATCCTCGCCCCTGGCTCGCGCGAACGCACAGGATGACCACCACCCTCGTGTCTGCCACCATCTTCGACTTGAGCGAAGTTTTATGCAAGT ACAAGATCTTGCTGCACGGTTTGTGGTACGAACTGTTTGGAGGAAACCCCAACAACTTGCCCACGGAGCTGGACGGGGGCGACCAGGAAG TCCTGACACAGCCTCTTCTGGGGGAGCAGAGCCTACTGACGCGCTGGTCCCCGGCCTACAGCTTCTCCAGCGACTCCCCACTGGACTCTT CTCCCAAGTACCCCCCTCTCTACCCTCCCGGCAGGATCATCCACCTGCAGGAGGAGGGCGCCTCGGGGCGGTTTGGCTGCTGCTCTGCTG CTCACTATAGCGCCAAGTGGTCACACGAAGCGGAATTCAGCAAAATACTCATAGGTCCGAAGATGCTCACCGACCACATGCCAGACATCC TGATGCGGGCCTTGGACAGCGTGGTCTCCGACAGAGCGGCCTGCGTCTCCTGTCCAGCACAAGGGGTCTCCAGTGTGGACGTGGCCTGAC CAGGGCCACTGGAAACTGTCCCAGGAACGATGGACTCACGCTTTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAA ACAGCGAATGTCCATCAACAGGAATCGGATGGGAACAGAATTCCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGCCATAAT >In-frame_ENST00000439696_ENST00000436575_TCGA-L5-A88W_ZFP36L1_chr14_69259598_-_DAGLB_chr7_6450011_length(amino acids)=168AA_start in transcript=302_stop in transcript=808 MTTTLVSATIFDLSEVLCKYKILLHGLWYELFGGNPNNLPTELDGGDQEVLTQPLLGEQSLLTRWSPAYSFSSDSPLDSSPKYPPLYPPG -------------------------------------------------------------- >In-frame_ENST00000336440_ENST00000297056_TCGA-L5-A88W_ZFP36L1_chr14_69259598_-_DAGLB_chr7_6450011_length(transcript)=3013nt_BP=1855nt GTGTGTTGGGGGTGGTGAGAATGCGCTCTCTTCGGCCCGCCCCGTCCTTTCCAAAGAAACGTGCTCATAATGGGGTGACCTAATTACATC GCAATGGAACTCAATCTTAGCCACTCCGCAGCACCGGGTTTCATAACAGACTCGGCGGCCTCGAGTGCTGGGAAGAAACGTGCGAGGGCC GAGGGGGGCGGCGGAGCCCGCGTGGAAATCGGAAAGAAGCGCAGCCCTGCGACTTCCGCCTGGGTCATCACGCCAGCAGTCGGGCCAAGG CGCAGGGGGCGGGTGGGGGACTCGTTAACTTTTTATTTGGGTGGGCGGCATCCAAACCTAACAGTATATATTTTATCATTTTCAAGGGAG TCATGCTCCATTGCGGGCCCTTCGGTTTCGTGGCTCCCATGTCCCCCTCTCCACCTCCCGCCAAAACGGCGCAGCGTGACAAGCCATATG TTCCACTCCGGTGGGGGCGAGAGAGAAGCAACAATAAGTTAAAAGTGCCGCCTCCCTCCACCTCTTTACCTTCATTCTTACCAAAGTAAC CTTTTTTCATTGTTCTAGAGTCTTGAGGTGTGTGTGGGGAGGATGGAGGAGGAGGGAGGGTTGTGGCGCCGCCCAGAATTCGGAGCGCGC GTGGAAAGTAGTGAGTTGCTCGGTGGGCTTTTTCTGGGAGGAAGGGGCATTCAGGAAGGATTAGGGTTTTCTTGACTAAAAAGTTTAAAG ATTGGATGCGTGAAAAGAAACGGCACGCCTAGGCCTGGTAAAACAAACAATCGTCCCGGGTTGTGGTCTTTTTTTGCGGCGCCCCCCACC CGCCCACACCCGGAGAGCGCCGGCTGCAAAGCGAGCGCGAGTGTCGACGCGTGCGGCGCACTAAATTGTGCCGCGCTCGCCCCCGCCAGA CCATGTCCTCCTGGGGAAAAAGTTTCCCTAGTCCCCCCAGCAGCGCGCCCCACCCTACGCCCCGCTGGAAAAAAAACAGCAACATAAAAT CCTAGGCTTGAACATTCTGTGCGTCCCAAATTTCTAATGTCCTCGGCCTGCCCGGTTTGCCGAAGGGAGCCGAGTGTCGAAGAGAAGTCG GGAAAAGGTAAGTTGTGCAGACACTTGGGGAAGTTTCAAGGAGACCGCCAGCTCAAGATGGAAACCGCGGCCCGGGCGCTAAGGACGGGC TTCAGCTCCCGCTGGCAAAAAGAGAAAGTCGAGCCCGCCTTCCTGCCCAACAAAAAACAACAACATGACAACAAGAACCCCGGAGGGAGT GGAATGAGTGACGTCACAGCCGCGCTCTGAGGCTGACAAAGGAGGGGGCGCGCCCCTCCCGCTCTGCGCCCGCGCGGCCCCGGAGAGGGG GCGCCTGAAGCGCCGGGTAGGGAAGTCAGCCGACTTGAAACTTTTCCTCTTAAAGAAAAAAAAAAAAAAGTTGTGCGCGGCTCACAGTGG GGTTTTTTTTTTCCGCCTTCTTTTCTCGTCTCCCCTCCCCCTTCTTCCTTTTGAAAGTTTCTTCTCCTCCCCCTGCCCCCCCTCCCCGCC TGACCGCATGGCTGATTCAACTCCAGTGTCAATCAACTTCTTTTTCCTCCTCTTCCTCATTTAAATAAGTTTAAAGCTCCTCCTCCCCCC GGCCCACCAAATCTGAACTTTATAAATTGGGCTTTGCGCGCCCCAGCCCGGAGTCAGAAAGGCGAGGGGCGCCGGGAACTGGCGTGTGGG ACTCCAGACAGGAGAGGCTGCGCCTTCCCCGCACCGGGACCTTCGCGACACACCAGATCCTCGCCCCTGGCTCGCGCGAACGCACAGGAT GACCACCACCCTCGTGTCTGCCACCATCTTCGACTTGAGCGAAGTTTTATGCAAGTACAAGATCTTGCTGCACGGTTTGTGGTACGAACT GTTTGGAGGAAACCCCAACAACTTGCCCACGGAGCTGGACGGGGGCGACCAGGAAGTCCTGACACAGCCTCTTCTGGGGGAGCAGAGCCT ACTGACGCGCTGGTCCCCGGCCTACAGCTTCTCCAGCGACTCCCCACTGGACTCTTCTCCCAAGTACCCCCCTCTCTACCCTCCCGGCAG GATCATCCACCTGCAGGAGGAGGGCGCCTCGGGGCGGTTTGGCTGCTGCTCTGCTGCTCACTATAGCGCCAAGTGGTCACACGAAGCGGA ATTCAGCAAAATACTCATAGGTCCGAAGATGCTCACCGACCACATGCCAGACATCCTGATGCGGGCCTTGGACAGCGTGGTCTCCGACAG AGCGGCCTGCGTCTCCTGTCCAGCACAAGGGGTCTCCAGTGTGGACGTGGCCTGACCAGGGCCACTGGAAACTGTCCCAGGAACGATGGA CTCACGCTTTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGGAATCGGATGGGA ACAGAATTCCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAG GACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAGCCCTGGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAG AAGTGCGGGAATCCAGGGCCCACCCAGAAGACCGTGAACAGTTCCTTAGCCTCCCACCCCCAAGGCAGCTCTTTTCATCCAACTCAGTTT ACAGGCGTGGTTTGTTTTTCAAACTGGGCTTCCTGGATGTACAAATGGAACTGTGGTGAGGGTGCGGGCTGGGGTTTTCTCCTGGGCGTC ACCAAGGGCAGCCCTGGGCTCTGGCTGGGGATGAAGACGAAACCCGATCGGGAAAGTAAGTGGAGCCCCCGGCCCCGCCGAGCCACAGCC CCCCAACTGCCTATTCCCACTGCCCAGTTGTTTGTCCACATCAGGAGTTGCTGATTGAATTCTTGCTACTCTTCTGGCTCTGGGGTCGGC >In-frame_ENST00000336440_ENST00000297056_TCGA-L5-A88W_ZFP36L1_chr14_69259598_-_DAGLB_chr7_6450011_length(amino acids)=168AA_start in transcript=1798_stop in transcript=2304 MTTTLVSATIFDLSEVLCKYKILLHGLWYELFGGNPNNLPTELDGGDQEVLTQPLLGEQSLLTRWSPAYSFSSDSPLDSSPKYPPLYPPG -------------------------------------------------------------- >In-frame_ENST00000336440_ENST00000425398_TCGA-L5-A88W_ZFP36L1_chr14_69259598_-_DAGLB_chr7_6450011_length(transcript)=2625nt_BP=1855nt GTGTGTTGGGGGTGGTGAGAATGCGCTCTCTTCGGCCCGCCCCGTCCTTTCCAAAGAAACGTGCTCATAATGGGGTGACCTAATTACATC GCAATGGAACTCAATCTTAGCCACTCCGCAGCACCGGGTTTCATAACAGACTCGGCGGCCTCGAGTGCTGGGAAGAAACGTGCGAGGGCC GAGGGGGGCGGCGGAGCCCGCGTGGAAATCGGAAAGAAGCGCAGCCCTGCGACTTCCGCCTGGGTCATCACGCCAGCAGTCGGGCCAAGG CGCAGGGGGCGGGTGGGGGACTCGTTAACTTTTTATTTGGGTGGGCGGCATCCAAACCTAACAGTATATATTTTATCATTTTCAAGGGAG TCATGCTCCATTGCGGGCCCTTCGGTTTCGTGGCTCCCATGTCCCCCTCTCCACCTCCCGCCAAAACGGCGCAGCGTGACAAGCCATATG TTCCACTCCGGTGGGGGCGAGAGAGAAGCAACAATAAGTTAAAAGTGCCGCCTCCCTCCACCTCTTTACCTTCATTCTTACCAAAGTAAC CTTTTTTCATTGTTCTAGAGTCTTGAGGTGTGTGTGGGGAGGATGGAGGAGGAGGGAGGGTTGTGGCGCCGCCCAGAATTCGGAGCGCGC GTGGAAAGTAGTGAGTTGCTCGGTGGGCTTTTTCTGGGAGGAAGGGGCATTCAGGAAGGATTAGGGTTTTCTTGACTAAAAAGTTTAAAG ATTGGATGCGTGAAAAGAAACGGCACGCCTAGGCCTGGTAAAACAAACAATCGTCCCGGGTTGTGGTCTTTTTTTGCGGCGCCCCCCACC CGCCCACACCCGGAGAGCGCCGGCTGCAAAGCGAGCGCGAGTGTCGACGCGTGCGGCGCACTAAATTGTGCCGCGCTCGCCCCCGCCAGA CCATGTCCTCCTGGGGAAAAAGTTTCCCTAGTCCCCCCAGCAGCGCGCCCCACCCTACGCCCCGCTGGAAAAAAAACAGCAACATAAAAT CCTAGGCTTGAACATTCTGTGCGTCCCAAATTTCTAATGTCCTCGGCCTGCCCGGTTTGCCGAAGGGAGCCGAGTGTCGAAGAGAAGTCG GGAAAAGGTAAGTTGTGCAGACACTTGGGGAAGTTTCAAGGAGACCGCCAGCTCAAGATGGAAACCGCGGCCCGGGCGCTAAGGACGGGC TTCAGCTCCCGCTGGCAAAAAGAGAAAGTCGAGCCCGCCTTCCTGCCCAACAAAAAACAACAACATGACAACAAGAACCCCGGAGGGAGT GGAATGAGTGACGTCACAGCCGCGCTCTGAGGCTGACAAAGGAGGGGGCGCGCCCCTCCCGCTCTGCGCCCGCGCGGCCCCGGAGAGGGG GCGCCTGAAGCGCCGGGTAGGGAAGTCAGCCGACTTGAAACTTTTCCTCTTAAAGAAAAAAAAAAAAAAGTTGTGCGCGGCTCACAGTGG GGTTTTTTTTTTCCGCCTTCTTTTCTCGTCTCCCCTCCCCCTTCTTCCTTTTGAAAGTTTCTTCTCCTCCCCCTGCCCCCCCTCCCCGCC TGACCGCATGGCTGATTCAACTCCAGTGTCAATCAACTTCTTTTTCCTCCTCTTCCTCATTTAAATAAGTTTAAAGCTCCTCCTCCCCCC GGCCCACCAAATCTGAACTTTATAAATTGGGCTTTGCGCGCCCCAGCCCGGAGTCAGAAAGGCGAGGGGCGCCGGGAACTGGCGTGTGGG ACTCCAGACAGGAGAGGCTGCGCCTTCCCCGCACCGGGACCTTCGCGACACACCAGATCCTCGCCCCTGGCTCGCGCGAACGCACAGGAT GACCACCACCCTCGTGTCTGCCACCATCTTCGACTTGAGCGAAGTTTTATGCAAGTACAAGATCTTGCTGCACGGTTTGTGGTACGAACT GTTTGGAGGAAACCCCAACAACTTGCCCACGGAGCTGGACGGGGGCGACCAGGAAGTCCTGACACAGCCTCTTCTGGGGGAGCAGAGCCT ACTGACGCGCTGGTCCCCGGCCTACAGCTTCTCCAGCGACTCCCCACTGGACTCTTCTCCCAAGTACCCCCCTCTCTACCCTCCCGGCAG GATCATCCACCTGCAGGAGGAGGGCGCCTCGGGGCGGTTTGGCTGCTGCTCTGCTGCTCACTATAGCGCCAAGTGGTCACACGAAGCGGA ATTCAGCAAAATACTCATAGGTCCGAAGATGCTCACCGACCACATGCCAGACATCCTGATGCGGGCCTTGGACAGCGTGGTCTCCGACAG AGCGGCCTGCGTCTCCTGTCCAGCACAAGGGGTCTCCAGTGTGGACGTGGCCTGACCAGGGCCACTGGAAACTGTCCCAGGAACGATGGA CTCACGCTTTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGGAATCGGATGGGA ACAGAATTCCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAG GACGACTCCTGAGACCCAGCGACCGTGGAGACAGCCTCGGGAAGCCCTGGCCCGTGGATGGATCCCTTGGCTGTCTGAGGACTGCTCCAG >In-frame_ENST00000336440_ENST00000425398_TCGA-L5-A88W_ZFP36L1_chr14_69259598_-_DAGLB_chr7_6450011_length(amino acids)=168AA_start in transcript=1798_stop in transcript=2304 MTTTLVSATIFDLSEVLCKYKILLHGLWYELFGGNPNNLPTELDGGDQEVLTQPLLGEQSLLTRWSPAYSFSSDSPLDSSPKYPPLYPPG -------------------------------------------------------------- >In-frame_ENST00000336440_ENST00000436575_TCGA-L5-A88W_ZFP36L1_chr14_69259598_-_DAGLB_chr7_6450011_length(transcript)=2542nt_BP=1855nt GTGTGTTGGGGGTGGTGAGAATGCGCTCTCTTCGGCCCGCCCCGTCCTTTCCAAAGAAACGTGCTCATAATGGGGTGACCTAATTACATC GCAATGGAACTCAATCTTAGCCACTCCGCAGCACCGGGTTTCATAACAGACTCGGCGGCCTCGAGTGCTGGGAAGAAACGTGCGAGGGCC GAGGGGGGCGGCGGAGCCCGCGTGGAAATCGGAAAGAAGCGCAGCCCTGCGACTTCCGCCTGGGTCATCACGCCAGCAGTCGGGCCAAGG CGCAGGGGGCGGGTGGGGGACTCGTTAACTTTTTATTTGGGTGGGCGGCATCCAAACCTAACAGTATATATTTTATCATTTTCAAGGGAG TCATGCTCCATTGCGGGCCCTTCGGTTTCGTGGCTCCCATGTCCCCCTCTCCACCTCCCGCCAAAACGGCGCAGCGTGACAAGCCATATG TTCCACTCCGGTGGGGGCGAGAGAGAAGCAACAATAAGTTAAAAGTGCCGCCTCCCTCCACCTCTTTACCTTCATTCTTACCAAAGTAAC CTTTTTTCATTGTTCTAGAGTCTTGAGGTGTGTGTGGGGAGGATGGAGGAGGAGGGAGGGTTGTGGCGCCGCCCAGAATTCGGAGCGCGC GTGGAAAGTAGTGAGTTGCTCGGTGGGCTTTTTCTGGGAGGAAGGGGCATTCAGGAAGGATTAGGGTTTTCTTGACTAAAAAGTTTAAAG ATTGGATGCGTGAAAAGAAACGGCACGCCTAGGCCTGGTAAAACAAACAATCGTCCCGGGTTGTGGTCTTTTTTTGCGGCGCCCCCCACC CGCCCACACCCGGAGAGCGCCGGCTGCAAAGCGAGCGCGAGTGTCGACGCGTGCGGCGCACTAAATTGTGCCGCGCTCGCCCCCGCCAGA CCATGTCCTCCTGGGGAAAAAGTTTCCCTAGTCCCCCCAGCAGCGCGCCCCACCCTACGCCCCGCTGGAAAAAAAACAGCAACATAAAAT CCTAGGCTTGAACATTCTGTGCGTCCCAAATTTCTAATGTCCTCGGCCTGCCCGGTTTGCCGAAGGGAGCCGAGTGTCGAAGAGAAGTCG GGAAAAGGTAAGTTGTGCAGACACTTGGGGAAGTTTCAAGGAGACCGCCAGCTCAAGATGGAAACCGCGGCCCGGGCGCTAAGGACGGGC TTCAGCTCCCGCTGGCAAAAAGAGAAAGTCGAGCCCGCCTTCCTGCCCAACAAAAAACAACAACATGACAACAAGAACCCCGGAGGGAGT GGAATGAGTGACGTCACAGCCGCGCTCTGAGGCTGACAAAGGAGGGGGCGCGCCCCTCCCGCTCTGCGCCCGCGCGGCCCCGGAGAGGGG GCGCCTGAAGCGCCGGGTAGGGAAGTCAGCCGACTTGAAACTTTTCCTCTTAAAGAAAAAAAAAAAAAAGTTGTGCGCGGCTCACAGTGG GGTTTTTTTTTTCCGCCTTCTTTTCTCGTCTCCCCTCCCCCTTCTTCCTTTTGAAAGTTTCTTCTCCTCCCCCTGCCCCCCCTCCCCGCC TGACCGCATGGCTGATTCAACTCCAGTGTCAATCAACTTCTTTTTCCTCCTCTTCCTCATTTAAATAAGTTTAAAGCTCCTCCTCCCCCC GGCCCACCAAATCTGAACTTTATAAATTGGGCTTTGCGCGCCCCAGCCCGGAGTCAGAAAGGCGAGGGGCGCCGGGAACTGGCGTGTGGG ACTCCAGACAGGAGAGGCTGCGCCTTCCCCGCACCGGGACCTTCGCGACACACCAGATCCTCGCCCCTGGCTCGCGCGAACGCACAGGAT GACCACCACCCTCGTGTCTGCCACCATCTTCGACTTGAGCGAAGTTTTATGCAAGTACAAGATCTTGCTGCACGGTTTGTGGTACGAACT GTTTGGAGGAAACCCCAACAACTTGCCCACGGAGCTGGACGGGGGCGACCAGGAAGTCCTGACACAGCCTCTTCTGGGGGAGCAGAGCCT ACTGACGCGCTGGTCCCCGGCCTACAGCTTCTCCAGCGACTCCCCACTGGACTCTTCTCCCAAGTACCCCCCTCTCTACCCTCCCGGCAG GATCATCCACCTGCAGGAGGAGGGCGCCTCGGGGCGGTTTGGCTGCTGCTCTGCTGCTCACTATAGCGCCAAGTGGTCACACGAAGCGGA ATTCAGCAAAATACTCATAGGTCCGAAGATGCTCACCGACCACATGCCAGACATCCTGATGCGGGCCTTGGACAGCGTGGTCTCCGACAG AGCGGCCTGCGTCTCCTGTCCAGCACAAGGGGTCTCCAGTGTGGACGTGGCCTGACCAGGGCCACTGGAAACTGTCCCAGGAACGATGGA CTCACGCTTTTGTCCTTAAACTGACTTACCATCCGAGGAGTTCCCATGACGCCAAAACAGCGAATGTCCATCAACAGGAATCGGATGGGA ACAGAATTCCATGGTCTCAATGACTTAAGTTTATGGGAAGTCATTGTGGCCATAATGGTAGCAGAAGTAGTGAGCACGCTCAGGTGATAG >In-frame_ENST00000336440_ENST00000436575_TCGA-L5-A88W_ZFP36L1_chr14_69259598_-_DAGLB_chr7_6450011_length(amino acids)=168AA_start in transcript=1798_stop in transcript=2304 MTTTLVSATIFDLSEVLCKYKILLHGLWYELFGGNPNNLPTELDGGDQEVLTQPLLGEQSLLTRWSPAYSFSSDSPLDSSPKYPPLYPPG -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for ZFP36L1-DAGLB |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for ZFP36L1-DAGLB |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for ZFP36L1-DAGLB |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |