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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:ZFP90-CDH3 (FusionGDB2 ID:100400) |
Fusion Gene Summary for ZFP90-CDH3 |
Fusion gene summary |
Fusion gene information | Fusion gene name: ZFP90-CDH3 | Fusion gene ID: 100400 | Hgene | Tgene | Gene symbol | ZFP90 | CDH3 | Gene ID | 146198 | 1013 |
Gene name | ZFP90 zinc finger protein | cadherin 15 | |
Synonyms | FIK|NK10|ZNF756|zfp-90 | CDH14|CDH3|CDHM|MCAD|MRD3 | |
Cytomap | 16q22.1 | 16q24.3 | |
Type of gene | protein-coding | protein-coding | |
Description | zinc finger protein 90 homologFOXP3-interacting KRAB domain-containing proteinzinc finger protein 476zinc finger protein 756 | cadherin-15cadherin 15, type 1, M-cadherin (myotubule)cadherin-14cadherin-3muscle-cadherin | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | P22223 | |
Ensembl transtripts involved in fusion gene | ENST00000570884, ENST00000570495, ENST00000563169, ENST00000564323, ENST00000398253, | ENST00000264012, ENST00000429102, ENST00000581171, ENST00000569117, | |
Fusion gene scores | * DoF score | 10 X 9 X 8=720 | 14 X 13 X 6=1092 |
# samples | 12 | 15 | |
** MAII score | log2(12/720*10)=-2.58496250072116 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(15/1092*10)=-2.86393845042397 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: ZFP90 [Title/Abstract] AND CDH3 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | ZFP90(68592471)-CDH3(68710288), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene breakpoints across ZFP90 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across CDH3 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | SARC | TCGA-DX-A48J-01A | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + |
ChimerDB4 | STAD | TCGA-CG-5721-01A | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + |
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Fusion Gene ORF analysis for ZFP90-CDH3 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-3CDS | ENST00000570884 | ENST00000264012 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + |
intron-3CDS | ENST00000570884 | ENST00000429102 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + |
intron-5UTR | ENST00000570884 | ENST00000581171 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + |
intron-intron | ENST00000570884 | ENST00000569117 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + |
In-frame | ENST00000570495 | ENST00000264012 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + |
In-frame | ENST00000570495 | ENST00000429102 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + |
5CDS-5UTR | ENST00000570495 | ENST00000581171 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + |
5CDS-intron | ENST00000570495 | ENST00000569117 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + |
In-frame | ENST00000563169 | ENST00000264012 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + |
In-frame | ENST00000563169 | ENST00000429102 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + |
5CDS-5UTR | ENST00000563169 | ENST00000581171 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + |
5CDS-intron | ENST00000563169 | ENST00000569117 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + |
In-frame | ENST00000564323 | ENST00000264012 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + |
In-frame | ENST00000564323 | ENST00000429102 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + |
5CDS-5UTR | ENST00000564323 | ENST00000581171 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + |
5CDS-intron | ENST00000564323 | ENST00000569117 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + |
In-frame | ENST00000398253 | ENST00000264012 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + |
In-frame | ENST00000398253 | ENST00000429102 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + |
5CDS-5UTR | ENST00000398253 | ENST00000581171 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + |
5CDS-intron | ENST00000398253 | ENST00000569117 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000570495 | ZFP90 | chr16 | 68592471 | + | ENST00000264012 | CDH3 | chr16 | 68710288 | + | 3546 | 548 | 7 | 2877 | 956 |
ENST00000570495 | ZFP90 | chr16 | 68592471 | + | ENST00000429102 | CDH3 | chr16 | 68710288 | + | 3612 | 548 | 7 | 2742 | 911 |
ENST00000563169 | ZFP90 | chr16 | 68592471 | + | ENST00000264012 | CDH3 | chr16 | 68710288 | + | 3485 | 487 | 93 | 2816 | 907 |
ENST00000563169 | ZFP90 | chr16 | 68592471 | + | ENST00000429102 | CDH3 | chr16 | 68710288 | + | 3551 | 487 | 93 | 2681 | 862 |
ENST00000564323 | ZFP90 | chr16 | 68592471 | + | ENST00000264012 | CDH3 | chr16 | 68710288 | + | 3468 | 470 | 10 | 2799 | 929 |
ENST00000564323 | ZFP90 | chr16 | 68592471 | + | ENST00000429102 | CDH3 | chr16 | 68710288 | + | 3534 | 470 | 10 | 2664 | 884 |
ENST00000398253 | ZFP90 | chr16 | 68592471 | + | ENST00000264012 | CDH3 | chr16 | 68710288 | + | 3289 | 291 | 35 | 2620 | 861 |
ENST00000398253 | ZFP90 | chr16 | 68592471 | + | ENST00000429102 | CDH3 | chr16 | 68710288 | + | 3355 | 291 | 35 | 2485 | 816 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000570495 | ENST00000264012 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + | 0.001746154 | 0.9982539 |
ENST00000570495 | ENST00000429102 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + | 0.002179333 | 0.9978206 |
ENST00000563169 | ENST00000264012 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + | 0.001685216 | 0.99831486 |
ENST00000563169 | ENST00000429102 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + | 0.002138622 | 0.9978613 |
ENST00000564323 | ENST00000264012 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + | 0.001675018 | 0.99832493 |
ENST00000564323 | ENST00000429102 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + | 0.002117554 | 0.9978824 |
ENST00000398253 | ENST00000264012 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + | 0.001558099 | 0.9984419 |
ENST00000398253 | ENST00000429102 | ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710288 | + | 0.001992123 | 0.99800795 |
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Fusion Genomic Features for ZFP90-CDH3 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710287 | + | 1.33E-08 | 1 |
ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710287 | + | 1.33E-08 | 1 |
ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710287 | + | 1.33E-08 | 1 |
ZFP90 | chr16 | 68592471 | + | CDH3 | chr16 | 68710287 | + | 1.33E-08 | 1 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for ZFP90-CDH3 |
Go to FGviewer for the breakpoints of chr16:68592471-chr16:68710288 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | CDH3 |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Cadherins are calcium-dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000398253 | + | 3 | 4 | 14_85 | 85.33333333333333 | 637.0 | Domain | KRAB |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000563169 | + | 4 | 5 | 14_85 | 85.33333333333333 | 637.0 | Domain | KRAB |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000570495 | + | 4 | 5 | 14_85 | 85.33333333333333 | 637.0 | Domain | KRAB |
Tgene | CDH3 | chr16:68592471 | chr16:68710288 | ENST00000264012 | 1 | 16 | 785_800 | 53.333333333333336 | 830.0 | Compositional bias | Note=Ser-rich | |
Tgene | CDH3 | chr16:68592471 | chr16:68710288 | ENST00000429102 | 1 | 16 | 785_800 | 53.333333333333336 | 785.0 | Compositional bias | Note=Ser-rich | |
Tgene | CDH3 | chr16:68592471 | chr16:68710288 | ENST00000264012 | 1 | 16 | 108_215 | 53.333333333333336 | 830.0 | Domain | Cadherin 1 | |
Tgene | CDH3 | chr16:68592471 | chr16:68710288 | ENST00000264012 | 1 | 16 | 216_328 | 53.333333333333336 | 830.0 | Domain | Cadherin 2 | |
Tgene | CDH3 | chr16:68592471 | chr16:68710288 | ENST00000264012 | 1 | 16 | 329_440 | 53.333333333333336 | 830.0 | Domain | Cadherin 3 | |
Tgene | CDH3 | chr16:68592471 | chr16:68710288 | ENST00000264012 | 1 | 16 | 441_546 | 53.333333333333336 | 830.0 | Domain | Cadherin 4 | |
Tgene | CDH3 | chr16:68592471 | chr16:68710288 | ENST00000264012 | 1 | 16 | 547_650 | 53.333333333333336 | 830.0 | Domain | Cadherin 5 | |
Tgene | CDH3 | chr16:68592471 | chr16:68710288 | ENST00000429102 | 1 | 16 | 108_215 | 53.333333333333336 | 785.0 | Domain | Cadherin 1 | |
Tgene | CDH3 | chr16:68592471 | chr16:68710288 | ENST00000429102 | 1 | 16 | 216_328 | 53.333333333333336 | 785.0 | Domain | Cadherin 2 | |
Tgene | CDH3 | chr16:68592471 | chr16:68710288 | ENST00000429102 | 1 | 16 | 329_440 | 53.333333333333336 | 785.0 | Domain | Cadherin 3 | |
Tgene | CDH3 | chr16:68592471 | chr16:68710288 | ENST00000429102 | 1 | 16 | 441_546 | 53.333333333333336 | 785.0 | Domain | Cadherin 4 | |
Tgene | CDH3 | chr16:68592471 | chr16:68710288 | ENST00000429102 | 1 | 16 | 547_650 | 53.333333333333336 | 785.0 | Domain | Cadherin 5 | |
Tgene | CDH3 | chr16:68592471 | chr16:68710288 | ENST00000264012 | 1 | 16 | 108_654 | 53.333333333333336 | 830.0 | Topological domain | Extracellular | |
Tgene | CDH3 | chr16:68592471 | chr16:68710288 | ENST00000264012 | 1 | 16 | 678_829 | 53.333333333333336 | 830.0 | Topological domain | Cytoplasmic | |
Tgene | CDH3 | chr16:68592471 | chr16:68710288 | ENST00000429102 | 1 | 16 | 108_654 | 53.333333333333336 | 785.0 | Topological domain | Extracellular | |
Tgene | CDH3 | chr16:68592471 | chr16:68710288 | ENST00000429102 | 1 | 16 | 678_829 | 53.333333333333336 | 785.0 | Topological domain | Cytoplasmic | |
Tgene | CDH3 | chr16:68592471 | chr16:68710288 | ENST00000264012 | 1 | 16 | 655_677 | 53.333333333333336 | 830.0 | Transmembrane | Helical | |
Tgene | CDH3 | chr16:68592471 | chr16:68710288 | ENST00000429102 | 1 | 16 | 655_677 | 53.333333333333336 | 785.0 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000398253 | + | 3 | 4 | 211_233 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 1 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000398253 | + | 3 | 4 | 254_276 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 2 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000398253 | + | 3 | 4 | 282_304 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 3 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000398253 | + | 3 | 4 | 310_332 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 4 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000398253 | + | 3 | 4 | 338_360 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 5 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000398253 | + | 3 | 4 | 366_388 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 6 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000398253 | + | 3 | 4 | 394_416 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 7 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000398253 | + | 3 | 4 | 450_472 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 8 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000398253 | + | 3 | 4 | 497_519 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 9 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000398253 | + | 3 | 4 | 525_547 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 10 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000398253 | + | 3 | 4 | 553_575 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 11 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000398253 | + | 3 | 4 | 581_603 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 12 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000398253 | + | 3 | 4 | 609_631 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 13 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000563169 | + | 4 | 5 | 211_233 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 1 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000563169 | + | 4 | 5 | 254_276 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 2 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000563169 | + | 4 | 5 | 282_304 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 3 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000563169 | + | 4 | 5 | 310_332 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 4 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000563169 | + | 4 | 5 | 338_360 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 5 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000563169 | + | 4 | 5 | 366_388 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 6 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000563169 | + | 4 | 5 | 394_416 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 7 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000563169 | + | 4 | 5 | 450_472 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 8 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000563169 | + | 4 | 5 | 497_519 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 9 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000563169 | + | 4 | 5 | 525_547 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 10 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000563169 | + | 4 | 5 | 553_575 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 11 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000563169 | + | 4 | 5 | 581_603 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 12 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000563169 | + | 4 | 5 | 609_631 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 13 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000570495 | + | 4 | 5 | 211_233 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 1 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000570495 | + | 4 | 5 | 254_276 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 2 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000570495 | + | 4 | 5 | 282_304 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 3 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000570495 | + | 4 | 5 | 310_332 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 4 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000570495 | + | 4 | 5 | 338_360 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 5 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000570495 | + | 4 | 5 | 366_388 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 6 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000570495 | + | 4 | 5 | 394_416 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 7 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000570495 | + | 4 | 5 | 450_472 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 8 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000570495 | + | 4 | 5 | 497_519 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 9 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000570495 | + | 4 | 5 | 525_547 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 10 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000570495 | + | 4 | 5 | 553_575 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 11 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000570495 | + | 4 | 5 | 581_603 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 12 |
Hgene | ZFP90 | chr16:68592471 | chr16:68710288 | ENST00000570495 | + | 4 | 5 | 609_631 | 85.33333333333333 | 637.0 | Zinc finger | C2H2-type 13 |
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Fusion Gene Sequence for ZFP90-CDH3 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000570495_ENST00000264012_TCGA-DX-A48J-01A_ZFP90_chr16_68592471_+_CDH3_chr16_68710288_length(transcript)=3546nt_BP=548nt CGGGCCTCTGGGAAGTGTAGTTCGCGCGCCCGGCGTGGACCCGGGGTTGCAGGAGCGAGGCTCCGAGTGCGCAGGCGCACTTCCAGTTCT GCCCCACCGCTGCGGCCATTGTCCGACCCCGGTGCGGCTGAGGCCCCTTTGGGCAGCCCCTCCGCAGATCAGAATTGGAGATAACCGAGG CTTCGGCGGGGGCGGGAGGAGCTGCCCGAGGCTCTGGGTGGGCCGGAGGTCGCGAAATCCGGAGCCCCCCAGAGGCGCTCCTGCCCCGGA GCCGGGCCCTGGCGAGGCAGGAATGGCCCCGAGGCCTCCGACCGCCGCGCCCCAGGAATCAGTGACATTCAAAGATGTGTCTGTGGACTT CACCCAGGAAGAATGGTACCATGTCGACCCTGCTCAGAGGAGCTTATACAGGGATGTGATGCTGGAGAACTATAGCCACCTGGTTTCTCT TGGATATCAAGTTTCCAAGCCAGAGGTGATCTTCAAATTGGAGCAAGGAGAAGAGCCATGGATATCAGAGGGAGAAATCCAACGACCTTT CTATCCAGTATTCATGGGCTGCCCTGGGCAAGAGCCAGCTCTGTTTAGCACTGATAATGATGACTTCACTGTGCGGAATGGCGAGACAGT CCAGGAAAGAAGGTCACTGAAGGAAAGGAATCCATTGAAGATCTTCCCATCCAAACGTATCTTACGAAGACACAAGAGAGATTGGGTGGT TGCTCCAATATCTGTCCCTGAAAATGGCAAGGGTCCCTTCCCCCAGAGACTGAATCAGCTCAAGTCTAATAAAGATAGAGACACCAAGAT TTTCTACAGCATCACGGGGCCGGGGGCAGACAGCCCCCCTGAGGGTGTCTTCGCTGTAGAGAAGGAGACAGGCTGGTTGTTGTTGAATAA GCCACTGGACCGGGAGGAGATTGCCAAGTATGAGCTCTTTGGCCACGCTGTGTCAGAGAATGGTGCCTCAGTGGAGGACCCCATGAACAT CTCCATCATCGTGACCGACCAGAATGACCACAAGCCCAAGTTTACCCAGGACACCTTCCGAGGGAGTGTCTTAGAGGGAGTCCTACCAGG TACTTCTGTGATGCAGGTGACAGCCACGGATGAGGATGATGCCATCTACACCTACAATGGGGTGGTTGCTTACTCCATCCATAGCCAAGA ACCAAAGGACCCACACGACCTCATGTTCACCATTCACCGGAGCACAGGCACCATCAGCGTCATCTCCAGTGGCCTGGACCGGGAAAAAGT CCCTGAGTACACACTGACCATCCAGGCCACAGACATGGATGGGGACGGCTCCACCACCACGGCAGTGGCAGTAGTGGAGATCCTTGATGC CAATGACAATGCTCCCATGTTTGACCCCCAGAAGTACGAGGCCCATGTGCCTGAGAATGCAGTGGGCCATGAGGTGCAGAGGCTGACGGT CACTGATCTGGACGCCCCCAACTCACCAGCGTGGCGTGCCACCTACCTTATCATGGGCGGTGACGACGGGGACCATTTTACCATCACCAC CCACCCTGAGAGCAACCAGGGCATCCTGACAACCAGGAAGGGTTTGGATTTTGAGGCCAAAAACCAGCACACCCTGTACGTTGAAGTGAC CAACGAGGCCCCTTTTGTGCTGAAGCTCCCAACCTCCACAGCCACCATAGTGGTCCACGTGGAGGATGTGAATGAGGCACCTGTGTTTGT CCCACCCTCCAAAGTCGTTGAGGTCCAGGAGGGCATCCCCACTGGGGAGCCTGTGTGTGTCTACACTGCAGAAGACCCTGACAAGGAGAA TCAAAAGATCAGCTACCGCATCCTGAGAGACCCAGCAGGGTGGCTAGCCATGGACCCAGACAGTGGGCAGGTCACAGCTGTGGGCACCCT CGACCGTGAGGATGAGCAGTTTGTGAGGAACAACATCTATGAAGTCATGGTCTTGGCCATGGACAATGGAAGCCCTCCCACCACTGGCAC GGGAACCCTTCTGCTAACACTGATTGATGTCAATGACCATGGCCCAGTCCCTGAGCCCCGTCAGATCACCATCTGCAACCAAAGCCCTGT GCGCCAGGTGCTGAACATCACGGACAAGGACCTGTCTCCCCACACCTCCCCTTTCCAGGCCCAGCTCACAGATGACTCAGACATCTACTG GACGGCAGAGGTCAACGAGGAAGGTGACACAGTGGTCTTGTCCCTGAAGAAGTTCCTGAAGCAGGATACATATGACGTGCACCTTTCTCT GTCTGACCATGGCAACAAAGAGCAGCTGACGGTGATCAGGGCCACTGTGTGCGACTGCCATGGCCATGTCGAAACCTGCCCTGGACCCTG GAAGGGAGGTTTCATCCTCCCTGTGCTGGGGGCTGTCCTGGCTCTGCTGTTCCTCCTGCTGGTGCTGCTTTTGTTGGTGAGAAAGAAGCG GAAGATCAAGGAGCCCCTCCTACTCCCAGAAGATGACACCCGTGACAACGTCTTCTACTATGGCGAAGAGGGGGGTGGCGAAGAGGACCA GGACTATGACATCACCCAGCTCCACCGAGGTCTGGAGGCCAGGCCGGAGGTGGTTCTCCGCAATGACGTGGCACCAACCATCATCCCGAC ACCCATGTACCGTCCTCGGCCAGCCAACCCAGATGAAATCGGCAACTTTATAATTGAGAACCTGAAGGCGGCTAACACAGACCCCACAGC CCCGCCCTACGACACCCTCTTGGTGTTCGACTATGAGGGCAGCGGCTCCGACGCCGCGTCCCTGAGCTCCCTCACCTCCTCCGCCTCCGA CCAAGACCAAGATTACGATTATCTGAACGAGTGGGGCAGCCGCTTCAAGAAGCTGGCAGACATGTACGGTGGCGGGGAGGACGACTAGGC GGCCTGCCTGCAGGGCTGGGGACCAAACGTCAGGCCACAGAGCATCTCCAAGGGGTCTCAGTTCCCCCTTCAGCTGAGGACTTCGGAGCT TGTCAGGAAGTGGCCGTAGCAACTTGGCGGAGACAGGCTATGAGTCTGACGTTAGAGTGGTGGCTTCCTTAGCCTTTCAGGATGGAGGAA TGTGGGCAGTTTGACTTCAGCACTGAAAACCTCTCCACCTGGGCCAGGGTTGCCTCAGAGGCCAAGTTTCCAGAAGCCTCTTACCTGCCG TAAAATGCTCAACCCTGTGTCCTGGGCCTGGGCCTGCTGTGACTGACCTACAGTGGACTTTCTCTCTGGAATGGAACCTTCTTAGGCCTC CTGGTGCAACTTAATTTTTTTTTTTAATGCTATCTTCAAAACGTTAGAGAAAGTTCTTCAAAAGTGCAGCCCAGAGCTGCTGGGCCCACT GGCCGTCCTGCATTTCTGGTTTCCAGACCCCAATGCCTCCCATTCGGATGGATCTCTGCGTTTTTATACTGAGTGTGCCTAGGTTGCCCC TTATTTTTTATTTTCCCTGTTGCGTTGCTATAGATGAAGGGTGAGGACAATCGTGTATATGTACTAGAACTTTTTTATTAAAGAAACTTT >In-frame_ENST00000570495_ENST00000264012_TCGA-DX-A48J-01A_ZFP90_chr16_68592471_+_CDH3_chr16_68710288_length(amino acids)=956AA_start in transcript=7_stop in transcript=2877 MGSVVRAPGVDPGLQERGSECAGALPVLPHRCGHCPTPVRLRPLWAAPPQIRIGDNRGFGGGGRSCPRLWVGRRSRNPEPPRGAPAPEPG PGEAGMAPRPPTAAPQESVTFKDVSVDFTQEEWYHVDPAQRSLYRDVMLENYSHLVSLGYQVSKPEVIFKLEQGEEPWISEGEIQRPFYP VFMGCPGQEPALFSTDNDDFTVRNGETVQERRSLKERNPLKIFPSKRILRRHKRDWVVAPISVPENGKGPFPQRLNQLKSNKDRDTKIFY SITGPGADSPPEGVFAVEKETGWLLLNKPLDREEIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFTQDTFRGSVLEGVLPGTS VMQVTATDEDDAIYTYNGVVAYSIHSQEPKDPHDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDMDGDGSTTTAVAVVEILDAND NAPMFDPQKYEAHVPENAVGHEVQRLTVTDLDAPNSPAWRATYLIMGGDDGDHFTITTHPESNQGILTTRKGLDFEAKNQHTLYVEVTNE APFVLKLPTSTATIVVHVEDVNEAPVFVPPSKVVEVQEGIPTGEPVCVYTAEDPDKENQKISYRILRDPAGWLAMDPDSGQVTAVGTLDR EDEQFVRNNIYEVMVLAMDNGSPPTTGTGTLLLTLIDVNDHGPVPEPRQITICNQSPVRQVLNITDKDLSPHTSPFQAQLTDDSDIYWTA EVNEEGDTVVLSLKKFLKQDTYDVHLSLSDHGNKEQLTVIRATVCDCHGHVETCPGPWKGGFILPVLGAVLALLFLLLVLLLLVRKKRKI KEPLLLPEDDTRDNVFYYGEEGGGEEDQDYDITQLHRGLEARPEVVLRNDVAPTIIPTPMYRPRPANPDEIGNFIIENLKAANTDPTAPP -------------------------------------------------------------- >In-frame_ENST00000570495_ENST00000429102_TCGA-DX-A48J-01A_ZFP90_chr16_68592471_+_CDH3_chr16_68710288_length(transcript)=3612nt_BP=548nt CGGGCCTCTGGGAAGTGTAGTTCGCGCGCCCGGCGTGGACCCGGGGTTGCAGGAGCGAGGCTCCGAGTGCGCAGGCGCACTTCCAGTTCT GCCCCACCGCTGCGGCCATTGTCCGACCCCGGTGCGGCTGAGGCCCCTTTGGGCAGCCCCTCCGCAGATCAGAATTGGAGATAACCGAGG CTTCGGCGGGGGCGGGAGGAGCTGCCCGAGGCTCTGGGTGGGCCGGAGGTCGCGAAATCCGGAGCCCCCCAGAGGCGCTCCTGCCCCGGA GCCGGGCCCTGGCGAGGCAGGAATGGCCCCGAGGCCTCCGACCGCCGCGCCCCAGGAATCAGTGACATTCAAAGATGTGTCTGTGGACTT CACCCAGGAAGAATGGTACCATGTCGACCCTGCTCAGAGGAGCTTATACAGGGATGTGATGCTGGAGAACTATAGCCACCTGGTTTCTCT TGGATATCAAGTTTCCAAGCCAGAGGTGATCTTCAAATTGGAGCAAGGAGAAGAGCCATGGATATCAGAGGGAGAAATCCAACGACCTTT CTATCCAGTATTCATGGGCTGCCCTGGGCAAGAGCCAGCTCTGTTTAGCACTGATAATGATGACTTCACTGTGCGGAATGGCGAGACAGT CCAGGAAAGAAGGTCACTGAAGGAAAGGAATCCATTGAAGATCTTCCCATCCAAACGTATCTTACGAAGACACAAGAGAGATTGGGTGGT TGCTCCAATATCTGTCCCTGAAAATGGCAAGGGTCCCTTCCCCCAGAGACTGAATCAGCTCAAGTCTAATAAAGATAGAGACACCAAGAT TTTCTACAGCATCACGGGGCCGGGGGCAGACAGCCCCCCTGAGGGTGTCTTCGCTGTAGAGAAGGAGACAGGCTGGTTGTTGTTGAATAA GCCACTGGACCGGGAGGAGATTGCCAAGTATGAGCTCTTTGGCCACGCTGTGTCAGAGAATGGTGCCTCAGTGGAGGACCCCATGAACAT CTCCATCATCGTGACCGACCAGAATGACCACAAGCCCAAGTTTACCCAGGACACCTTCCGAGGGAGTGTCTTAGAGGGAGTCCTACCAGG TACTTCTGTGATGCAGGTGACAGCCACGGATGAGGATGATGCCATCTACACCTACAATGGGGTGGTTGCTTACTCCATCCATAGCCAAGA ACCAAAGGACCCACACGACCTCATGTTCACCATTCACCGGAGCACAGGCACCATCAGCGTCATCTCCAGTGGCCTGGACCGGGAAAAAGT CCCTGAGTACACACTGACCATCCAGGCCACAGACATGGATGGGGACGGCTCCACCACCACGGCAGTGGCAGTAGTGGAGATCCTTGATGC CAATGACAATGCTCCCATGTTTGACCCCCAGAAGTACGAGGCCCATGTGCCTGAGAATGCAGTGGGCCATGAGGTGCAGAGGCTGACGGT CACTGATCTGGACGCCCCCAACTCACCAGCGTGGCGTGCCACCTACCTTATCATGGGCGGTGACGACGGGGACCATTTTACCATCACCAC CCACCCTGAGAGCAACCAGGGCATCCTGACAACCAGGAAGGGTTTGGATTTTGAGGCCAAAAACCAGCACACCCTGTACGTTGAAGTGAC CAACGAGGCCCCTTTTGTGCTGAAGCTCCCAACCTCCACAGCCACCATAGTGGTCCACGTGGAGGATGTGAATGAGGCACCTGTGTTTGT CCCACCCTCCAAAGTCGTTGAGGTCCAGGAGGGCATCCCCACTGGGGAGCCTGTGTGTGTCTACACTGCAGAAGACCCTGACAAGGAGAA TCAAAAGATCAGCTACCGCATCCTGAGAGACCCAGCAGGGTGGCTAGCCATGGACCCAGACAGTGGGCAGGTCACAGCTGTGGGCACCCT CGACCGTGAGGATGAGCAGTTTGTGAGGAACAACATCTATGAAGTCATGGTCTTGGCCATGGACAATGGAAGCCCTCCCACCACTGGCAC GGGAACCCTTCTGCTAACACTGATTGATGTCAATGACCATGGCCCAGTCCCTGAGCCCCGTCAGATCACCATCTGCAACCAAAGCCCTGT GCGCCAGGTGCTGAACATCACGGACAAGGACCTGTCTCCCCACACCTCCCCTTTCCAGGCCCAGCTCACAGATGACTCAGACATCTACTG GACGGCAGAGGTCAACGAGGAAGGTGACACAGTGGTCTTGTCCCTGAAGAAGTTCCTGAAGCAGGATACATATGACGTGCACCTTTCTCT GTCTGACCATGGCAACAAAGAGCAGCTGACGGTGATCAGGGCCACTGTGTGCGACTGCCATGGCCATGTCGAAACCTGCCCTGGACCCTG GAAGGGAGGTTTCATCCTCCCTGTGCTGGGGGCTGTCCTGGCTCTGCTGTTCCTCCTGCTGGTGCTGCTTTTGTTGGTGAGAAAGAAGCG GAAGATCAAGGAGCCCCTCCTACTCCCAGAAGATGACACCCGTGACAACGTCTTCTACTATGGCGAAGAGGGGGGTGGCGAAGAGGACCA GGACTATGACATCACCCAGCTCCACCGAGGTCTGGAGGCCAGGCCGGAGGTGGTTCTCCGCAATGACGTGGCACCAACCATCATCCCGAC ACCCATGTACCGTCCTCGGCCAGCCAACCCAGATGAAATCGGCAACTTTATAATTGAGGGGAGGGGAGAGAGGGGCTCACAGAGAGGAAA TGGAGGCTTGCAGCTGGCAAGAGGCAGGACCCGCCGCTCCTAACTACCTGTTCTCTGTTGCCGCAGAACCTGAAGGCGGCTAACACAGAC CCCACAGCCCCGCCCTACGACACCCTCTTGGTGTTCGACTATGAGGGCAGCGGCTCCGACGCCGCGTCCCTGAGCTCCCTCACCTCCTCC GCCTCCGACCAAGACCAAGATTACGATTATCTGAACGAGTGGGGCAGCCGCTTCAAGAAGCTGGCAGACATGTACGGTGGCGGGGAGGAC GACTAGGCGGCCTGCCTGCAGGGCTGGGGACCAAACGTCAGGCCACAGAGCATCTCCAAGGGGTCTCAGTTCCCCCTTCAGCTGAGGACT TCGGAGCTTGTCAGGAAGTGGCCGTAGCAACTTGGCGGAGACAGGCTATGAGTCTGACGTTAGAGTGGTGGCTTCCTTAGCCTTTCAGGA TGGAGGAATGTGGGCAGTTTGACTTCAGCACTGAAAACCTCTCCACCTGGGCCAGGGTTGCCTCAGAGGCCAAGTTTCCAGAAGCCTCTT ACCTGCCGTAAAATGCTCAACCCTGTGTCCTGGGCCTGGGCCTGCTGTGACTGACCTACAGTGGACTTTCTCTCTGGAATGGAACCTTCT TAGGCCTCCTGGTGCAACTTAATTTTTTTTTTTAATGCTATCTTCAAAACGTTAGAGAAAGTTCTTCAAAAGTGCAGCCCAGAGCTGCTG GGCCCACTGGCCGTCCTGCATTTCTGGTTTCCAGACCCCAATGCCTCCCATTCGGATGGATCTCTGCGTTTTTATACTGAGTGTGCCTAG GTTGCCCCTTATTTTTTATTTTCCCTGTTGCGTTGCTATAGATGAAGGGTGAGGACAATCGTGTATATGTACTAGAACTTTTTTATTAAA >In-frame_ENST00000570495_ENST00000429102_TCGA-DX-A48J-01A_ZFP90_chr16_68592471_+_CDH3_chr16_68710288_length(amino acids)=911AA_start in transcript=7_stop in transcript=2742 MGSVVRAPGVDPGLQERGSECAGALPVLPHRCGHCPTPVRLRPLWAAPPQIRIGDNRGFGGGGRSCPRLWVGRRSRNPEPPRGAPAPEPG PGEAGMAPRPPTAAPQESVTFKDVSVDFTQEEWYHVDPAQRSLYRDVMLENYSHLVSLGYQVSKPEVIFKLEQGEEPWISEGEIQRPFYP VFMGCPGQEPALFSTDNDDFTVRNGETVQERRSLKERNPLKIFPSKRILRRHKRDWVVAPISVPENGKGPFPQRLNQLKSNKDRDTKIFY SITGPGADSPPEGVFAVEKETGWLLLNKPLDREEIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFTQDTFRGSVLEGVLPGTS VMQVTATDEDDAIYTYNGVVAYSIHSQEPKDPHDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDMDGDGSTTTAVAVVEILDAND NAPMFDPQKYEAHVPENAVGHEVQRLTVTDLDAPNSPAWRATYLIMGGDDGDHFTITTHPESNQGILTTRKGLDFEAKNQHTLYVEVTNE APFVLKLPTSTATIVVHVEDVNEAPVFVPPSKVVEVQEGIPTGEPVCVYTAEDPDKENQKISYRILRDPAGWLAMDPDSGQVTAVGTLDR EDEQFVRNNIYEVMVLAMDNGSPPTTGTGTLLLTLIDVNDHGPVPEPRQITICNQSPVRQVLNITDKDLSPHTSPFQAQLTDDSDIYWTA EVNEEGDTVVLSLKKFLKQDTYDVHLSLSDHGNKEQLTVIRATVCDCHGHVETCPGPWKGGFILPVLGAVLALLFLLLVLLLLVRKKRKI KEPLLLPEDDTRDNVFYYGEEGGGEEDQDYDITQLHRGLEARPEVVLRNDVAPTIIPTPMYRPRPANPDEIGNFIIEGRGERGSQRGNGG -------------------------------------------------------------- >In-frame_ENST00000563169_ENST00000264012_TCGA-DX-A48J-01A_ZFP90_chr16_68592471_+_CDH3_chr16_68710288_length(transcript)=3485nt_BP=487nt CAGGCGCACTTCCAGTTCTGCCCCACCGCTGCGGCCATTGTCCGACCCCGGTGCGGCTGAGGCCCCTTTGGGCAGCCCCTCCGCAGATCA GAATTGGAGATAACCGAGGCTTCGGCGGGGGCGGGAGGAGCTGCCCGAGGCTCTGGGTGGGCCGGAGGTCGCGAAATCCGGAGCCCCCCA GAGGCGGTGATTCTGACTCCTGCCCCGGAGCCGGGCCCTGGCGAGGCAGGAATGGCCCCGAGGCCTCCGACCGCCGCGCCCCAGGAATCA GTGACATTCAAAGATGTGTCTGTGGACTTCACCCAGGAAGAATGGTACCATGTCGACCCTGCTCAGAGGAGCTTATACAGGGATGTGATG CTGGAGAACTATAGCCACCTGGTTTCTCTTGGATATCAAGTTTCCAAGCCAGAGGTGATCTTCAAATTGGAGCAAGGAGAAGAGCCATGG ATATCAGAGGGAGAAATCCAACGACCTTTCTATCCAGTATTCATGGGCTGCCCTGGGCAAGAGCCAGCTCTGTTTAGCACTGATAATGAT GACTTCACTGTGCGGAATGGCGAGACAGTCCAGGAAAGAAGGTCACTGAAGGAAAGGAATCCATTGAAGATCTTCCCATCCAAACGTATC TTACGAAGACACAAGAGAGATTGGGTGGTTGCTCCAATATCTGTCCCTGAAAATGGCAAGGGTCCCTTCCCCCAGAGACTGAATCAGCTC AAGTCTAATAAAGATAGAGACACCAAGATTTTCTACAGCATCACGGGGCCGGGGGCAGACAGCCCCCCTGAGGGTGTCTTCGCTGTAGAG AAGGAGACAGGCTGGTTGTTGTTGAATAAGCCACTGGACCGGGAGGAGATTGCCAAGTATGAGCTCTTTGGCCACGCTGTGTCAGAGAAT GGTGCCTCAGTGGAGGACCCCATGAACATCTCCATCATCGTGACCGACCAGAATGACCACAAGCCCAAGTTTACCCAGGACACCTTCCGA GGGAGTGTCTTAGAGGGAGTCCTACCAGGTACTTCTGTGATGCAGGTGACAGCCACGGATGAGGATGATGCCATCTACACCTACAATGGG GTGGTTGCTTACTCCATCCATAGCCAAGAACCAAAGGACCCACACGACCTCATGTTCACCATTCACCGGAGCACAGGCACCATCAGCGTC ATCTCCAGTGGCCTGGACCGGGAAAAAGTCCCTGAGTACACACTGACCATCCAGGCCACAGACATGGATGGGGACGGCTCCACCACCACG GCAGTGGCAGTAGTGGAGATCCTTGATGCCAATGACAATGCTCCCATGTTTGACCCCCAGAAGTACGAGGCCCATGTGCCTGAGAATGCA GTGGGCCATGAGGTGCAGAGGCTGACGGTCACTGATCTGGACGCCCCCAACTCACCAGCGTGGCGTGCCACCTACCTTATCATGGGCGGT GACGACGGGGACCATTTTACCATCACCACCCACCCTGAGAGCAACCAGGGCATCCTGACAACCAGGAAGGGTTTGGATTTTGAGGCCAAA AACCAGCACACCCTGTACGTTGAAGTGACCAACGAGGCCCCTTTTGTGCTGAAGCTCCCAACCTCCACAGCCACCATAGTGGTCCACGTG GAGGATGTGAATGAGGCACCTGTGTTTGTCCCACCCTCCAAAGTCGTTGAGGTCCAGGAGGGCATCCCCACTGGGGAGCCTGTGTGTGTC TACACTGCAGAAGACCCTGACAAGGAGAATCAAAAGATCAGCTACCGCATCCTGAGAGACCCAGCAGGGTGGCTAGCCATGGACCCAGAC AGTGGGCAGGTCACAGCTGTGGGCACCCTCGACCGTGAGGATGAGCAGTTTGTGAGGAACAACATCTATGAAGTCATGGTCTTGGCCATG GACAATGGAAGCCCTCCCACCACTGGCACGGGAACCCTTCTGCTAACACTGATTGATGTCAATGACCATGGCCCAGTCCCTGAGCCCCGT CAGATCACCATCTGCAACCAAAGCCCTGTGCGCCAGGTGCTGAACATCACGGACAAGGACCTGTCTCCCCACACCTCCCCTTTCCAGGCC CAGCTCACAGATGACTCAGACATCTACTGGACGGCAGAGGTCAACGAGGAAGGTGACACAGTGGTCTTGTCCCTGAAGAAGTTCCTGAAG CAGGATACATATGACGTGCACCTTTCTCTGTCTGACCATGGCAACAAAGAGCAGCTGACGGTGATCAGGGCCACTGTGTGCGACTGCCAT GGCCATGTCGAAACCTGCCCTGGACCCTGGAAGGGAGGTTTCATCCTCCCTGTGCTGGGGGCTGTCCTGGCTCTGCTGTTCCTCCTGCTG GTGCTGCTTTTGTTGGTGAGAAAGAAGCGGAAGATCAAGGAGCCCCTCCTACTCCCAGAAGATGACACCCGTGACAACGTCTTCTACTAT GGCGAAGAGGGGGGTGGCGAAGAGGACCAGGACTATGACATCACCCAGCTCCACCGAGGTCTGGAGGCCAGGCCGGAGGTGGTTCTCCGC AATGACGTGGCACCAACCATCATCCCGACACCCATGTACCGTCCTCGGCCAGCCAACCCAGATGAAATCGGCAACTTTATAATTGAGAAC CTGAAGGCGGCTAACACAGACCCCACAGCCCCGCCCTACGACACCCTCTTGGTGTTCGACTATGAGGGCAGCGGCTCCGACGCCGCGTCC CTGAGCTCCCTCACCTCCTCCGCCTCCGACCAAGACCAAGATTACGATTATCTGAACGAGTGGGGCAGCCGCTTCAAGAAGCTGGCAGAC ATGTACGGTGGCGGGGAGGACGACTAGGCGGCCTGCCTGCAGGGCTGGGGACCAAACGTCAGGCCACAGAGCATCTCCAAGGGGTCTCAG TTCCCCCTTCAGCTGAGGACTTCGGAGCTTGTCAGGAAGTGGCCGTAGCAACTTGGCGGAGACAGGCTATGAGTCTGACGTTAGAGTGGT GGCTTCCTTAGCCTTTCAGGATGGAGGAATGTGGGCAGTTTGACTTCAGCACTGAAAACCTCTCCACCTGGGCCAGGGTTGCCTCAGAGG CCAAGTTTCCAGAAGCCTCTTACCTGCCGTAAAATGCTCAACCCTGTGTCCTGGGCCTGGGCCTGCTGTGACTGACCTACAGTGGACTTT CTCTCTGGAATGGAACCTTCTTAGGCCTCCTGGTGCAACTTAATTTTTTTTTTTAATGCTATCTTCAAAACGTTAGAGAAAGTTCTTCAA AAGTGCAGCCCAGAGCTGCTGGGCCCACTGGCCGTCCTGCATTTCTGGTTTCCAGACCCCAATGCCTCCCATTCGGATGGATCTCTGCGT TTTTATACTGAGTGTGCCTAGGTTGCCCCTTATTTTTTATTTTCCCTGTTGCGTTGCTATAGATGAAGGGTGAGGACAATCGTGTATATG >In-frame_ENST00000563169_ENST00000264012_TCGA-DX-A48J-01A_ZFP90_chr16_68592471_+_CDH3_chr16_68710288_length(amino acids)=907AA_start in transcript=93_stop in transcript=2816 MEITEASAGAGGAARGSGWAGGREIRSPPEAVILTPAPEPGPGEAGMAPRPPTAAPQESVTFKDVSVDFTQEEWYHVDPAQRSLYRDVML ENYSHLVSLGYQVSKPEVIFKLEQGEEPWISEGEIQRPFYPVFMGCPGQEPALFSTDNDDFTVRNGETVQERRSLKERNPLKIFPSKRIL RRHKRDWVVAPISVPENGKGPFPQRLNQLKSNKDRDTKIFYSITGPGADSPPEGVFAVEKETGWLLLNKPLDREEIAKYELFGHAVSENG ASVEDPMNISIIVTDQNDHKPKFTQDTFRGSVLEGVLPGTSVMQVTATDEDDAIYTYNGVVAYSIHSQEPKDPHDLMFTIHRSTGTISVI SSGLDREKVPEYTLTIQATDMDGDGSTTTAVAVVEILDANDNAPMFDPQKYEAHVPENAVGHEVQRLTVTDLDAPNSPAWRATYLIMGGD DGDHFTITTHPESNQGILTTRKGLDFEAKNQHTLYVEVTNEAPFVLKLPTSTATIVVHVEDVNEAPVFVPPSKVVEVQEGIPTGEPVCVY TAEDPDKENQKISYRILRDPAGWLAMDPDSGQVTAVGTLDREDEQFVRNNIYEVMVLAMDNGSPPTTGTGTLLLTLIDVNDHGPVPEPRQ ITICNQSPVRQVLNITDKDLSPHTSPFQAQLTDDSDIYWTAEVNEEGDTVVLSLKKFLKQDTYDVHLSLSDHGNKEQLTVIRATVCDCHG HVETCPGPWKGGFILPVLGAVLALLFLLLVLLLLVRKKRKIKEPLLLPEDDTRDNVFYYGEEGGGEEDQDYDITQLHRGLEARPEVVLRN DVAPTIIPTPMYRPRPANPDEIGNFIIENLKAANTDPTAPPYDTLLVFDYEGSGSDAASLSSLTSSASDQDQDYDYLNEWGSRFKKLADM -------------------------------------------------------------- >In-frame_ENST00000563169_ENST00000429102_TCGA-DX-A48J-01A_ZFP90_chr16_68592471_+_CDH3_chr16_68710288_length(transcript)=3551nt_BP=487nt CAGGCGCACTTCCAGTTCTGCCCCACCGCTGCGGCCATTGTCCGACCCCGGTGCGGCTGAGGCCCCTTTGGGCAGCCCCTCCGCAGATCA GAATTGGAGATAACCGAGGCTTCGGCGGGGGCGGGAGGAGCTGCCCGAGGCTCTGGGTGGGCCGGAGGTCGCGAAATCCGGAGCCCCCCA GAGGCGGTGATTCTGACTCCTGCCCCGGAGCCGGGCCCTGGCGAGGCAGGAATGGCCCCGAGGCCTCCGACCGCCGCGCCCCAGGAATCA GTGACATTCAAAGATGTGTCTGTGGACTTCACCCAGGAAGAATGGTACCATGTCGACCCTGCTCAGAGGAGCTTATACAGGGATGTGATG CTGGAGAACTATAGCCACCTGGTTTCTCTTGGATATCAAGTTTCCAAGCCAGAGGTGATCTTCAAATTGGAGCAAGGAGAAGAGCCATGG ATATCAGAGGGAGAAATCCAACGACCTTTCTATCCAGTATTCATGGGCTGCCCTGGGCAAGAGCCAGCTCTGTTTAGCACTGATAATGAT GACTTCACTGTGCGGAATGGCGAGACAGTCCAGGAAAGAAGGTCACTGAAGGAAAGGAATCCATTGAAGATCTTCCCATCCAAACGTATC TTACGAAGACACAAGAGAGATTGGGTGGTTGCTCCAATATCTGTCCCTGAAAATGGCAAGGGTCCCTTCCCCCAGAGACTGAATCAGCTC AAGTCTAATAAAGATAGAGACACCAAGATTTTCTACAGCATCACGGGGCCGGGGGCAGACAGCCCCCCTGAGGGTGTCTTCGCTGTAGAG AAGGAGACAGGCTGGTTGTTGTTGAATAAGCCACTGGACCGGGAGGAGATTGCCAAGTATGAGCTCTTTGGCCACGCTGTGTCAGAGAAT GGTGCCTCAGTGGAGGACCCCATGAACATCTCCATCATCGTGACCGACCAGAATGACCACAAGCCCAAGTTTACCCAGGACACCTTCCGA GGGAGTGTCTTAGAGGGAGTCCTACCAGGTACTTCTGTGATGCAGGTGACAGCCACGGATGAGGATGATGCCATCTACACCTACAATGGG GTGGTTGCTTACTCCATCCATAGCCAAGAACCAAAGGACCCACACGACCTCATGTTCACCATTCACCGGAGCACAGGCACCATCAGCGTC ATCTCCAGTGGCCTGGACCGGGAAAAAGTCCCTGAGTACACACTGACCATCCAGGCCACAGACATGGATGGGGACGGCTCCACCACCACG GCAGTGGCAGTAGTGGAGATCCTTGATGCCAATGACAATGCTCCCATGTTTGACCCCCAGAAGTACGAGGCCCATGTGCCTGAGAATGCA GTGGGCCATGAGGTGCAGAGGCTGACGGTCACTGATCTGGACGCCCCCAACTCACCAGCGTGGCGTGCCACCTACCTTATCATGGGCGGT GACGACGGGGACCATTTTACCATCACCACCCACCCTGAGAGCAACCAGGGCATCCTGACAACCAGGAAGGGTTTGGATTTTGAGGCCAAA AACCAGCACACCCTGTACGTTGAAGTGACCAACGAGGCCCCTTTTGTGCTGAAGCTCCCAACCTCCACAGCCACCATAGTGGTCCACGTG GAGGATGTGAATGAGGCACCTGTGTTTGTCCCACCCTCCAAAGTCGTTGAGGTCCAGGAGGGCATCCCCACTGGGGAGCCTGTGTGTGTC TACACTGCAGAAGACCCTGACAAGGAGAATCAAAAGATCAGCTACCGCATCCTGAGAGACCCAGCAGGGTGGCTAGCCATGGACCCAGAC AGTGGGCAGGTCACAGCTGTGGGCACCCTCGACCGTGAGGATGAGCAGTTTGTGAGGAACAACATCTATGAAGTCATGGTCTTGGCCATG GACAATGGAAGCCCTCCCACCACTGGCACGGGAACCCTTCTGCTAACACTGATTGATGTCAATGACCATGGCCCAGTCCCTGAGCCCCGT CAGATCACCATCTGCAACCAAAGCCCTGTGCGCCAGGTGCTGAACATCACGGACAAGGACCTGTCTCCCCACACCTCCCCTTTCCAGGCC CAGCTCACAGATGACTCAGACATCTACTGGACGGCAGAGGTCAACGAGGAAGGTGACACAGTGGTCTTGTCCCTGAAGAAGTTCCTGAAG CAGGATACATATGACGTGCACCTTTCTCTGTCTGACCATGGCAACAAAGAGCAGCTGACGGTGATCAGGGCCACTGTGTGCGACTGCCAT GGCCATGTCGAAACCTGCCCTGGACCCTGGAAGGGAGGTTTCATCCTCCCTGTGCTGGGGGCTGTCCTGGCTCTGCTGTTCCTCCTGCTG GTGCTGCTTTTGTTGGTGAGAAAGAAGCGGAAGATCAAGGAGCCCCTCCTACTCCCAGAAGATGACACCCGTGACAACGTCTTCTACTAT GGCGAAGAGGGGGGTGGCGAAGAGGACCAGGACTATGACATCACCCAGCTCCACCGAGGTCTGGAGGCCAGGCCGGAGGTGGTTCTCCGC AATGACGTGGCACCAACCATCATCCCGACACCCATGTACCGTCCTCGGCCAGCCAACCCAGATGAAATCGGCAACTTTATAATTGAGGGG AGGGGAGAGAGGGGCTCACAGAGAGGAAATGGAGGCTTGCAGCTGGCAAGAGGCAGGACCCGCCGCTCCTAACTACCTGTTCTCTGTTGC CGCAGAACCTGAAGGCGGCTAACACAGACCCCACAGCCCCGCCCTACGACACCCTCTTGGTGTTCGACTATGAGGGCAGCGGCTCCGACG CCGCGTCCCTGAGCTCCCTCACCTCCTCCGCCTCCGACCAAGACCAAGATTACGATTATCTGAACGAGTGGGGCAGCCGCTTCAAGAAGC TGGCAGACATGTACGGTGGCGGGGAGGACGACTAGGCGGCCTGCCTGCAGGGCTGGGGACCAAACGTCAGGCCACAGAGCATCTCCAAGG GGTCTCAGTTCCCCCTTCAGCTGAGGACTTCGGAGCTTGTCAGGAAGTGGCCGTAGCAACTTGGCGGAGACAGGCTATGAGTCTGACGTT AGAGTGGTGGCTTCCTTAGCCTTTCAGGATGGAGGAATGTGGGCAGTTTGACTTCAGCACTGAAAACCTCTCCACCTGGGCCAGGGTTGC CTCAGAGGCCAAGTTTCCAGAAGCCTCTTACCTGCCGTAAAATGCTCAACCCTGTGTCCTGGGCCTGGGCCTGCTGTGACTGACCTACAG TGGACTTTCTCTCTGGAATGGAACCTTCTTAGGCCTCCTGGTGCAACTTAATTTTTTTTTTTAATGCTATCTTCAAAACGTTAGAGAAAG TTCTTCAAAAGTGCAGCCCAGAGCTGCTGGGCCCACTGGCCGTCCTGCATTTCTGGTTTCCAGACCCCAATGCCTCCCATTCGGATGGAT CTCTGCGTTTTTATACTGAGTGTGCCTAGGTTGCCCCTTATTTTTTATTTTCCCTGTTGCGTTGCTATAGATGAAGGGTGAGGACAATCG >In-frame_ENST00000563169_ENST00000429102_TCGA-DX-A48J-01A_ZFP90_chr16_68592471_+_CDH3_chr16_68710288_length(amino acids)=862AA_start in transcript=93_stop in transcript=2681 MEITEASAGAGGAARGSGWAGGREIRSPPEAVILTPAPEPGPGEAGMAPRPPTAAPQESVTFKDVSVDFTQEEWYHVDPAQRSLYRDVML ENYSHLVSLGYQVSKPEVIFKLEQGEEPWISEGEIQRPFYPVFMGCPGQEPALFSTDNDDFTVRNGETVQERRSLKERNPLKIFPSKRIL RRHKRDWVVAPISVPENGKGPFPQRLNQLKSNKDRDTKIFYSITGPGADSPPEGVFAVEKETGWLLLNKPLDREEIAKYELFGHAVSENG ASVEDPMNISIIVTDQNDHKPKFTQDTFRGSVLEGVLPGTSVMQVTATDEDDAIYTYNGVVAYSIHSQEPKDPHDLMFTIHRSTGTISVI SSGLDREKVPEYTLTIQATDMDGDGSTTTAVAVVEILDANDNAPMFDPQKYEAHVPENAVGHEVQRLTVTDLDAPNSPAWRATYLIMGGD DGDHFTITTHPESNQGILTTRKGLDFEAKNQHTLYVEVTNEAPFVLKLPTSTATIVVHVEDVNEAPVFVPPSKVVEVQEGIPTGEPVCVY TAEDPDKENQKISYRILRDPAGWLAMDPDSGQVTAVGTLDREDEQFVRNNIYEVMVLAMDNGSPPTTGTGTLLLTLIDVNDHGPVPEPRQ ITICNQSPVRQVLNITDKDLSPHTSPFQAQLTDDSDIYWTAEVNEEGDTVVLSLKKFLKQDTYDVHLSLSDHGNKEQLTVIRATVCDCHG HVETCPGPWKGGFILPVLGAVLALLFLLLVLLLLVRKKRKIKEPLLLPEDDTRDNVFYYGEEGGGEEDQDYDITQLHRGLEARPEVVLRN -------------------------------------------------------------- >In-frame_ENST00000564323_ENST00000264012_TCGA-DX-A48J-01A_ZFP90_chr16_68592471_+_CDH3_chr16_68710288_length(transcript)=3468nt_BP=470nt ACTTCCAGTTCTGCCCCACCGCTGCGGCCATTGTCCGACCCCGGTGCGGCTGAGGCCCCTTTGGGCAGCCCCTCCGCAGATCAGAATTGG AGATAACCGAGGCTTCGGCGGGGGCGGGAGGAGCTGCCCGAGGCTCTGGGTGGGCCGGAGGTCGCGAAATCCGGAGCCCCCCAGAGGCGC TCCTGCCCCGGAGCCGGGCCCTGGCGAGGCAGGAATGGCCCCGAGGCCTCCGACCGCCGCGCCCCAGGAATCAGTGACATTCAAAGATGT GTCTGTGGACTTCACCCAGGAAGAATGGTACCATGTCGACCCTGCTCAGAGGAGCTTATACAGGGATGTGATGCTGGAGAACTATAGCCA CCTGGTTTCTCTTGGATATCAAGTTTCCAAGCCAGAGGTGATCTTCAAATTGGAGCAAGGAGAAGAGCCATGGATATCAGAGGGAGAAAT CCAACGACCTTTCTATCCAGTATTCATGGGCTGCCCTGGGCAAGAGCCAGCTCTGTTTAGCACTGATAATGATGACTTCACTGTGCGGAA TGGCGAGACAGTCCAGGAAAGAAGGTCACTGAAGGAAAGGAATCCATTGAAGATCTTCCCATCCAAACGTATCTTACGAAGACACAAGAG AGATTGGGTGGTTGCTCCAATATCTGTCCCTGAAAATGGCAAGGGTCCCTTCCCCCAGAGACTGAATCAGCTCAAGTCTAATAAAGATAG AGACACCAAGATTTTCTACAGCATCACGGGGCCGGGGGCAGACAGCCCCCCTGAGGGTGTCTTCGCTGTAGAGAAGGAGACAGGCTGGTT GTTGTTGAATAAGCCACTGGACCGGGAGGAGATTGCCAAGTATGAGCTCTTTGGCCACGCTGTGTCAGAGAATGGTGCCTCAGTGGAGGA CCCCATGAACATCTCCATCATCGTGACCGACCAGAATGACCACAAGCCCAAGTTTACCCAGGACACCTTCCGAGGGAGTGTCTTAGAGGG AGTCCTACCAGGTACTTCTGTGATGCAGGTGACAGCCACGGATGAGGATGATGCCATCTACACCTACAATGGGGTGGTTGCTTACTCCAT CCATAGCCAAGAACCAAAGGACCCACACGACCTCATGTTCACCATTCACCGGAGCACAGGCACCATCAGCGTCATCTCCAGTGGCCTGGA CCGGGAAAAAGTCCCTGAGTACACACTGACCATCCAGGCCACAGACATGGATGGGGACGGCTCCACCACCACGGCAGTGGCAGTAGTGGA GATCCTTGATGCCAATGACAATGCTCCCATGTTTGACCCCCAGAAGTACGAGGCCCATGTGCCTGAGAATGCAGTGGGCCATGAGGTGCA GAGGCTGACGGTCACTGATCTGGACGCCCCCAACTCACCAGCGTGGCGTGCCACCTACCTTATCATGGGCGGTGACGACGGGGACCATTT TACCATCACCACCCACCCTGAGAGCAACCAGGGCATCCTGACAACCAGGAAGGGTTTGGATTTTGAGGCCAAAAACCAGCACACCCTGTA CGTTGAAGTGACCAACGAGGCCCCTTTTGTGCTGAAGCTCCCAACCTCCACAGCCACCATAGTGGTCCACGTGGAGGATGTGAATGAGGC ACCTGTGTTTGTCCCACCCTCCAAAGTCGTTGAGGTCCAGGAGGGCATCCCCACTGGGGAGCCTGTGTGTGTCTACACTGCAGAAGACCC TGACAAGGAGAATCAAAAGATCAGCTACCGCATCCTGAGAGACCCAGCAGGGTGGCTAGCCATGGACCCAGACAGTGGGCAGGTCACAGC TGTGGGCACCCTCGACCGTGAGGATGAGCAGTTTGTGAGGAACAACATCTATGAAGTCATGGTCTTGGCCATGGACAATGGAAGCCCTCC CACCACTGGCACGGGAACCCTTCTGCTAACACTGATTGATGTCAATGACCATGGCCCAGTCCCTGAGCCCCGTCAGATCACCATCTGCAA CCAAAGCCCTGTGCGCCAGGTGCTGAACATCACGGACAAGGACCTGTCTCCCCACACCTCCCCTTTCCAGGCCCAGCTCACAGATGACTC AGACATCTACTGGACGGCAGAGGTCAACGAGGAAGGTGACACAGTGGTCTTGTCCCTGAAGAAGTTCCTGAAGCAGGATACATATGACGT GCACCTTTCTCTGTCTGACCATGGCAACAAAGAGCAGCTGACGGTGATCAGGGCCACTGTGTGCGACTGCCATGGCCATGTCGAAACCTG CCCTGGACCCTGGAAGGGAGGTTTCATCCTCCCTGTGCTGGGGGCTGTCCTGGCTCTGCTGTTCCTCCTGCTGGTGCTGCTTTTGTTGGT GAGAAAGAAGCGGAAGATCAAGGAGCCCCTCCTACTCCCAGAAGATGACACCCGTGACAACGTCTTCTACTATGGCGAAGAGGGGGGTGG CGAAGAGGACCAGGACTATGACATCACCCAGCTCCACCGAGGTCTGGAGGCCAGGCCGGAGGTGGTTCTCCGCAATGACGTGGCACCAAC CATCATCCCGACACCCATGTACCGTCCTCGGCCAGCCAACCCAGATGAAATCGGCAACTTTATAATTGAGAACCTGAAGGCGGCTAACAC AGACCCCACAGCCCCGCCCTACGACACCCTCTTGGTGTTCGACTATGAGGGCAGCGGCTCCGACGCCGCGTCCCTGAGCTCCCTCACCTC CTCCGCCTCCGACCAAGACCAAGATTACGATTATCTGAACGAGTGGGGCAGCCGCTTCAAGAAGCTGGCAGACATGTACGGTGGCGGGGA GGACGACTAGGCGGCCTGCCTGCAGGGCTGGGGACCAAACGTCAGGCCACAGAGCATCTCCAAGGGGTCTCAGTTCCCCCTTCAGCTGAG GACTTCGGAGCTTGTCAGGAAGTGGCCGTAGCAACTTGGCGGAGACAGGCTATGAGTCTGACGTTAGAGTGGTGGCTTCCTTAGCCTTTC AGGATGGAGGAATGTGGGCAGTTTGACTTCAGCACTGAAAACCTCTCCACCTGGGCCAGGGTTGCCTCAGAGGCCAAGTTTCCAGAAGCC TCTTACCTGCCGTAAAATGCTCAACCCTGTGTCCTGGGCCTGGGCCTGCTGTGACTGACCTACAGTGGACTTTCTCTCTGGAATGGAACC TTCTTAGGCCTCCTGGTGCAACTTAATTTTTTTTTTTAATGCTATCTTCAAAACGTTAGAGAAAGTTCTTCAAAAGTGCAGCCCAGAGCT GCTGGGCCCACTGGCCGTCCTGCATTTCTGGTTTCCAGACCCCAATGCCTCCCATTCGGATGGATCTCTGCGTTTTTATACTGAGTGTGC CTAGGTTGCCCCTTATTTTTTATTTTCCCTGTTGCGTTGCTATAGATGAAGGGTGAGGACAATCGTGTATATGTACTAGAACTTTTTTAT >In-frame_ENST00000564323_ENST00000264012_TCGA-DX-A48J-01A_ZFP90_chr16_68592471_+_CDH3_chr16_68710288_length(amino acids)=929AA_start in transcript=10_stop in transcript=2799 MPHRCGHCPTPVRLRPLWAAPPQIRIGDNRGFGGGGRSCPRLWVGRRSRNPEPPRGAPAPEPGPGEAGMAPRPPTAAPQESVTFKDVSVD FTQEEWYHVDPAQRSLYRDVMLENYSHLVSLGYQVSKPEVIFKLEQGEEPWISEGEIQRPFYPVFMGCPGQEPALFSTDNDDFTVRNGET VQERRSLKERNPLKIFPSKRILRRHKRDWVVAPISVPENGKGPFPQRLNQLKSNKDRDTKIFYSITGPGADSPPEGVFAVEKETGWLLLN KPLDREEIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFTQDTFRGSVLEGVLPGTSVMQVTATDEDDAIYTYNGVVAYSIHSQ EPKDPHDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDMDGDGSTTTAVAVVEILDANDNAPMFDPQKYEAHVPENAVGHEVQRLT VTDLDAPNSPAWRATYLIMGGDDGDHFTITTHPESNQGILTTRKGLDFEAKNQHTLYVEVTNEAPFVLKLPTSTATIVVHVEDVNEAPVF VPPSKVVEVQEGIPTGEPVCVYTAEDPDKENQKISYRILRDPAGWLAMDPDSGQVTAVGTLDREDEQFVRNNIYEVMVLAMDNGSPPTTG TGTLLLTLIDVNDHGPVPEPRQITICNQSPVRQVLNITDKDLSPHTSPFQAQLTDDSDIYWTAEVNEEGDTVVLSLKKFLKQDTYDVHLS LSDHGNKEQLTVIRATVCDCHGHVETCPGPWKGGFILPVLGAVLALLFLLLVLLLLVRKKRKIKEPLLLPEDDTRDNVFYYGEEGGGEED QDYDITQLHRGLEARPEVVLRNDVAPTIIPTPMYRPRPANPDEIGNFIIENLKAANTDPTAPPYDTLLVFDYEGSGSDAASLSSLTSSAS -------------------------------------------------------------- >In-frame_ENST00000564323_ENST00000429102_TCGA-DX-A48J-01A_ZFP90_chr16_68592471_+_CDH3_chr16_68710288_length(transcript)=3534nt_BP=470nt ACTTCCAGTTCTGCCCCACCGCTGCGGCCATTGTCCGACCCCGGTGCGGCTGAGGCCCCTTTGGGCAGCCCCTCCGCAGATCAGAATTGG AGATAACCGAGGCTTCGGCGGGGGCGGGAGGAGCTGCCCGAGGCTCTGGGTGGGCCGGAGGTCGCGAAATCCGGAGCCCCCCAGAGGCGC TCCTGCCCCGGAGCCGGGCCCTGGCGAGGCAGGAATGGCCCCGAGGCCTCCGACCGCCGCGCCCCAGGAATCAGTGACATTCAAAGATGT GTCTGTGGACTTCACCCAGGAAGAATGGTACCATGTCGACCCTGCTCAGAGGAGCTTATACAGGGATGTGATGCTGGAGAACTATAGCCA CCTGGTTTCTCTTGGATATCAAGTTTCCAAGCCAGAGGTGATCTTCAAATTGGAGCAAGGAGAAGAGCCATGGATATCAGAGGGAGAAAT CCAACGACCTTTCTATCCAGTATTCATGGGCTGCCCTGGGCAAGAGCCAGCTCTGTTTAGCACTGATAATGATGACTTCACTGTGCGGAA TGGCGAGACAGTCCAGGAAAGAAGGTCACTGAAGGAAAGGAATCCATTGAAGATCTTCCCATCCAAACGTATCTTACGAAGACACAAGAG AGATTGGGTGGTTGCTCCAATATCTGTCCCTGAAAATGGCAAGGGTCCCTTCCCCCAGAGACTGAATCAGCTCAAGTCTAATAAAGATAG AGACACCAAGATTTTCTACAGCATCACGGGGCCGGGGGCAGACAGCCCCCCTGAGGGTGTCTTCGCTGTAGAGAAGGAGACAGGCTGGTT GTTGTTGAATAAGCCACTGGACCGGGAGGAGATTGCCAAGTATGAGCTCTTTGGCCACGCTGTGTCAGAGAATGGTGCCTCAGTGGAGGA CCCCATGAACATCTCCATCATCGTGACCGACCAGAATGACCACAAGCCCAAGTTTACCCAGGACACCTTCCGAGGGAGTGTCTTAGAGGG AGTCCTACCAGGTACTTCTGTGATGCAGGTGACAGCCACGGATGAGGATGATGCCATCTACACCTACAATGGGGTGGTTGCTTACTCCAT CCATAGCCAAGAACCAAAGGACCCACACGACCTCATGTTCACCATTCACCGGAGCACAGGCACCATCAGCGTCATCTCCAGTGGCCTGGA CCGGGAAAAAGTCCCTGAGTACACACTGACCATCCAGGCCACAGACATGGATGGGGACGGCTCCACCACCACGGCAGTGGCAGTAGTGGA GATCCTTGATGCCAATGACAATGCTCCCATGTTTGACCCCCAGAAGTACGAGGCCCATGTGCCTGAGAATGCAGTGGGCCATGAGGTGCA GAGGCTGACGGTCACTGATCTGGACGCCCCCAACTCACCAGCGTGGCGTGCCACCTACCTTATCATGGGCGGTGACGACGGGGACCATTT TACCATCACCACCCACCCTGAGAGCAACCAGGGCATCCTGACAACCAGGAAGGGTTTGGATTTTGAGGCCAAAAACCAGCACACCCTGTA CGTTGAAGTGACCAACGAGGCCCCTTTTGTGCTGAAGCTCCCAACCTCCACAGCCACCATAGTGGTCCACGTGGAGGATGTGAATGAGGC ACCTGTGTTTGTCCCACCCTCCAAAGTCGTTGAGGTCCAGGAGGGCATCCCCACTGGGGAGCCTGTGTGTGTCTACACTGCAGAAGACCC TGACAAGGAGAATCAAAAGATCAGCTACCGCATCCTGAGAGACCCAGCAGGGTGGCTAGCCATGGACCCAGACAGTGGGCAGGTCACAGC TGTGGGCACCCTCGACCGTGAGGATGAGCAGTTTGTGAGGAACAACATCTATGAAGTCATGGTCTTGGCCATGGACAATGGAAGCCCTCC CACCACTGGCACGGGAACCCTTCTGCTAACACTGATTGATGTCAATGACCATGGCCCAGTCCCTGAGCCCCGTCAGATCACCATCTGCAA CCAAAGCCCTGTGCGCCAGGTGCTGAACATCACGGACAAGGACCTGTCTCCCCACACCTCCCCTTTCCAGGCCCAGCTCACAGATGACTC AGACATCTACTGGACGGCAGAGGTCAACGAGGAAGGTGACACAGTGGTCTTGTCCCTGAAGAAGTTCCTGAAGCAGGATACATATGACGT GCACCTTTCTCTGTCTGACCATGGCAACAAAGAGCAGCTGACGGTGATCAGGGCCACTGTGTGCGACTGCCATGGCCATGTCGAAACCTG CCCTGGACCCTGGAAGGGAGGTTTCATCCTCCCTGTGCTGGGGGCTGTCCTGGCTCTGCTGTTCCTCCTGCTGGTGCTGCTTTTGTTGGT GAGAAAGAAGCGGAAGATCAAGGAGCCCCTCCTACTCCCAGAAGATGACACCCGTGACAACGTCTTCTACTATGGCGAAGAGGGGGGTGG CGAAGAGGACCAGGACTATGACATCACCCAGCTCCACCGAGGTCTGGAGGCCAGGCCGGAGGTGGTTCTCCGCAATGACGTGGCACCAAC CATCATCCCGACACCCATGTACCGTCCTCGGCCAGCCAACCCAGATGAAATCGGCAACTTTATAATTGAGGGGAGGGGAGAGAGGGGCTC ACAGAGAGGAAATGGAGGCTTGCAGCTGGCAAGAGGCAGGACCCGCCGCTCCTAACTACCTGTTCTCTGTTGCCGCAGAACCTGAAGGCG GCTAACACAGACCCCACAGCCCCGCCCTACGACACCCTCTTGGTGTTCGACTATGAGGGCAGCGGCTCCGACGCCGCGTCCCTGAGCTCC CTCACCTCCTCCGCCTCCGACCAAGACCAAGATTACGATTATCTGAACGAGTGGGGCAGCCGCTTCAAGAAGCTGGCAGACATGTACGGT GGCGGGGAGGACGACTAGGCGGCCTGCCTGCAGGGCTGGGGACCAAACGTCAGGCCACAGAGCATCTCCAAGGGGTCTCAGTTCCCCCTT CAGCTGAGGACTTCGGAGCTTGTCAGGAAGTGGCCGTAGCAACTTGGCGGAGACAGGCTATGAGTCTGACGTTAGAGTGGTGGCTTCCTT AGCCTTTCAGGATGGAGGAATGTGGGCAGTTTGACTTCAGCACTGAAAACCTCTCCACCTGGGCCAGGGTTGCCTCAGAGGCCAAGTTTC CAGAAGCCTCTTACCTGCCGTAAAATGCTCAACCCTGTGTCCTGGGCCTGGGCCTGCTGTGACTGACCTACAGTGGACTTTCTCTCTGGA ATGGAACCTTCTTAGGCCTCCTGGTGCAACTTAATTTTTTTTTTTAATGCTATCTTCAAAACGTTAGAGAAAGTTCTTCAAAAGTGCAGC CCAGAGCTGCTGGGCCCACTGGCCGTCCTGCATTTCTGGTTTCCAGACCCCAATGCCTCCCATTCGGATGGATCTCTGCGTTTTTATACT GAGTGTGCCTAGGTTGCCCCTTATTTTTTATTTTCCCTGTTGCGTTGCTATAGATGAAGGGTGAGGACAATCGTGTATATGTACTAGAAC >In-frame_ENST00000564323_ENST00000429102_TCGA-DX-A48J-01A_ZFP90_chr16_68592471_+_CDH3_chr16_68710288_length(amino acids)=884AA_start in transcript=10_stop in transcript=2664 MPHRCGHCPTPVRLRPLWAAPPQIRIGDNRGFGGGGRSCPRLWVGRRSRNPEPPRGAPAPEPGPGEAGMAPRPPTAAPQESVTFKDVSVD FTQEEWYHVDPAQRSLYRDVMLENYSHLVSLGYQVSKPEVIFKLEQGEEPWISEGEIQRPFYPVFMGCPGQEPALFSTDNDDFTVRNGET VQERRSLKERNPLKIFPSKRILRRHKRDWVVAPISVPENGKGPFPQRLNQLKSNKDRDTKIFYSITGPGADSPPEGVFAVEKETGWLLLN KPLDREEIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFTQDTFRGSVLEGVLPGTSVMQVTATDEDDAIYTYNGVVAYSIHSQ EPKDPHDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDMDGDGSTTTAVAVVEILDANDNAPMFDPQKYEAHVPENAVGHEVQRLT VTDLDAPNSPAWRATYLIMGGDDGDHFTITTHPESNQGILTTRKGLDFEAKNQHTLYVEVTNEAPFVLKLPTSTATIVVHVEDVNEAPVF VPPSKVVEVQEGIPTGEPVCVYTAEDPDKENQKISYRILRDPAGWLAMDPDSGQVTAVGTLDREDEQFVRNNIYEVMVLAMDNGSPPTTG TGTLLLTLIDVNDHGPVPEPRQITICNQSPVRQVLNITDKDLSPHTSPFQAQLTDDSDIYWTAEVNEEGDTVVLSLKKFLKQDTYDVHLS LSDHGNKEQLTVIRATVCDCHGHVETCPGPWKGGFILPVLGAVLALLFLLLVLLLLVRKKRKIKEPLLLPEDDTRDNVFYYGEEGGGEED -------------------------------------------------------------- >In-frame_ENST00000398253_ENST00000264012_TCGA-DX-A48J-01A_ZFP90_chr16_68592471_+_CDH3_chr16_68710288_length(transcript)=3289nt_BP=291nt CTCCTGCCCCGGAGCCGGGCCCTGGCGAGGCAGGAATGGCCCCGAGGCCTCCGACCGCCGCGCCCCAGGAATCAGTGACATTCAAAGATG TGTCTGTGGACTTCACCCAGGAAGAATGGTACCATGTCGACCCTGCTCAGAGGAGCTTATACAGGGATGTGATGCTGGAGAACTATAGCC ACCTGGTTTCTCTTGGATATCAAGTTTCCAAGCCAGAGGTGATCTTCAAATTGGAGCAAGGAGAAGAGCCATGGATATCAGAGGGAGAAA TCCAACGACCTTTCTATCCAGTATTCATGGGCTGCCCTGGGCAAGAGCCAGCTCTGTTTAGCACTGATAATGATGACTTCACTGTGCGGA ATGGCGAGACAGTCCAGGAAAGAAGGTCACTGAAGGAAAGGAATCCATTGAAGATCTTCCCATCCAAACGTATCTTACGAAGACACAAGA GAGATTGGGTGGTTGCTCCAATATCTGTCCCTGAAAATGGCAAGGGTCCCTTCCCCCAGAGACTGAATCAGCTCAAGTCTAATAAAGATA GAGACACCAAGATTTTCTACAGCATCACGGGGCCGGGGGCAGACAGCCCCCCTGAGGGTGTCTTCGCTGTAGAGAAGGAGACAGGCTGGT TGTTGTTGAATAAGCCACTGGACCGGGAGGAGATTGCCAAGTATGAGCTCTTTGGCCACGCTGTGTCAGAGAATGGTGCCTCAGTGGAGG ACCCCATGAACATCTCCATCATCGTGACCGACCAGAATGACCACAAGCCCAAGTTTACCCAGGACACCTTCCGAGGGAGTGTCTTAGAGG GAGTCCTACCAGGTACTTCTGTGATGCAGGTGACAGCCACGGATGAGGATGATGCCATCTACACCTACAATGGGGTGGTTGCTTACTCCA TCCATAGCCAAGAACCAAAGGACCCACACGACCTCATGTTCACCATTCACCGGAGCACAGGCACCATCAGCGTCATCTCCAGTGGCCTGG ACCGGGAAAAAGTCCCTGAGTACACACTGACCATCCAGGCCACAGACATGGATGGGGACGGCTCCACCACCACGGCAGTGGCAGTAGTGG AGATCCTTGATGCCAATGACAATGCTCCCATGTTTGACCCCCAGAAGTACGAGGCCCATGTGCCTGAGAATGCAGTGGGCCATGAGGTGC AGAGGCTGACGGTCACTGATCTGGACGCCCCCAACTCACCAGCGTGGCGTGCCACCTACCTTATCATGGGCGGTGACGACGGGGACCATT TTACCATCACCACCCACCCTGAGAGCAACCAGGGCATCCTGACAACCAGGAAGGGTTTGGATTTTGAGGCCAAAAACCAGCACACCCTGT ACGTTGAAGTGACCAACGAGGCCCCTTTTGTGCTGAAGCTCCCAACCTCCACAGCCACCATAGTGGTCCACGTGGAGGATGTGAATGAGG CACCTGTGTTTGTCCCACCCTCCAAAGTCGTTGAGGTCCAGGAGGGCATCCCCACTGGGGAGCCTGTGTGTGTCTACACTGCAGAAGACC CTGACAAGGAGAATCAAAAGATCAGCTACCGCATCCTGAGAGACCCAGCAGGGTGGCTAGCCATGGACCCAGACAGTGGGCAGGTCACAG CTGTGGGCACCCTCGACCGTGAGGATGAGCAGTTTGTGAGGAACAACATCTATGAAGTCATGGTCTTGGCCATGGACAATGGAAGCCCTC CCACCACTGGCACGGGAACCCTTCTGCTAACACTGATTGATGTCAATGACCATGGCCCAGTCCCTGAGCCCCGTCAGATCACCATCTGCA ACCAAAGCCCTGTGCGCCAGGTGCTGAACATCACGGACAAGGACCTGTCTCCCCACACCTCCCCTTTCCAGGCCCAGCTCACAGATGACT CAGACATCTACTGGACGGCAGAGGTCAACGAGGAAGGTGACACAGTGGTCTTGTCCCTGAAGAAGTTCCTGAAGCAGGATACATATGACG TGCACCTTTCTCTGTCTGACCATGGCAACAAAGAGCAGCTGACGGTGATCAGGGCCACTGTGTGCGACTGCCATGGCCATGTCGAAACCT GCCCTGGACCCTGGAAGGGAGGTTTCATCCTCCCTGTGCTGGGGGCTGTCCTGGCTCTGCTGTTCCTCCTGCTGGTGCTGCTTTTGTTGG TGAGAAAGAAGCGGAAGATCAAGGAGCCCCTCCTACTCCCAGAAGATGACACCCGTGACAACGTCTTCTACTATGGCGAAGAGGGGGGTG GCGAAGAGGACCAGGACTATGACATCACCCAGCTCCACCGAGGTCTGGAGGCCAGGCCGGAGGTGGTTCTCCGCAATGACGTGGCACCAA CCATCATCCCGACACCCATGTACCGTCCTCGGCCAGCCAACCCAGATGAAATCGGCAACTTTATAATTGAGAACCTGAAGGCGGCTAACA CAGACCCCACAGCCCCGCCCTACGACACCCTCTTGGTGTTCGACTATGAGGGCAGCGGCTCCGACGCCGCGTCCCTGAGCTCCCTCACCT CCTCCGCCTCCGACCAAGACCAAGATTACGATTATCTGAACGAGTGGGGCAGCCGCTTCAAGAAGCTGGCAGACATGTACGGTGGCGGGG AGGACGACTAGGCGGCCTGCCTGCAGGGCTGGGGACCAAACGTCAGGCCACAGAGCATCTCCAAGGGGTCTCAGTTCCCCCTTCAGCTGA GGACTTCGGAGCTTGTCAGGAAGTGGCCGTAGCAACTTGGCGGAGACAGGCTATGAGTCTGACGTTAGAGTGGTGGCTTCCTTAGCCTTT CAGGATGGAGGAATGTGGGCAGTTTGACTTCAGCACTGAAAACCTCTCCACCTGGGCCAGGGTTGCCTCAGAGGCCAAGTTTCCAGAAGC CTCTTACCTGCCGTAAAATGCTCAACCCTGTGTCCTGGGCCTGGGCCTGCTGTGACTGACCTACAGTGGACTTTCTCTCTGGAATGGAAC CTTCTTAGGCCTCCTGGTGCAACTTAATTTTTTTTTTTAATGCTATCTTCAAAACGTTAGAGAAAGTTCTTCAAAAGTGCAGCCCAGAGC TGCTGGGCCCACTGGCCGTCCTGCATTTCTGGTTTCCAGACCCCAATGCCTCCCATTCGGATGGATCTCTGCGTTTTTATACTGAGTGTG CCTAGGTTGCCCCTTATTTTTTATTTTCCCTGTTGCGTTGCTATAGATGAAGGGTGAGGACAATCGTGTATATGTACTAGAACTTTTTTA >In-frame_ENST00000398253_ENST00000264012_TCGA-DX-A48J-01A_ZFP90_chr16_68592471_+_CDH3_chr16_68710288_length(amino acids)=861AA_start in transcript=35_stop in transcript=2620 MAPRPPTAAPQESVTFKDVSVDFTQEEWYHVDPAQRSLYRDVMLENYSHLVSLGYQVSKPEVIFKLEQGEEPWISEGEIQRPFYPVFMGC PGQEPALFSTDNDDFTVRNGETVQERRSLKERNPLKIFPSKRILRRHKRDWVVAPISVPENGKGPFPQRLNQLKSNKDRDTKIFYSITGP GADSPPEGVFAVEKETGWLLLNKPLDREEIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFTQDTFRGSVLEGVLPGTSVMQVT ATDEDDAIYTYNGVVAYSIHSQEPKDPHDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDMDGDGSTTTAVAVVEILDANDNAPMF DPQKYEAHVPENAVGHEVQRLTVTDLDAPNSPAWRATYLIMGGDDGDHFTITTHPESNQGILTTRKGLDFEAKNQHTLYVEVTNEAPFVL KLPTSTATIVVHVEDVNEAPVFVPPSKVVEVQEGIPTGEPVCVYTAEDPDKENQKISYRILRDPAGWLAMDPDSGQVTAVGTLDREDEQF VRNNIYEVMVLAMDNGSPPTTGTGTLLLTLIDVNDHGPVPEPRQITICNQSPVRQVLNITDKDLSPHTSPFQAQLTDDSDIYWTAEVNEE GDTVVLSLKKFLKQDTYDVHLSLSDHGNKEQLTVIRATVCDCHGHVETCPGPWKGGFILPVLGAVLALLFLLLVLLLLVRKKRKIKEPLL LPEDDTRDNVFYYGEEGGGEEDQDYDITQLHRGLEARPEVVLRNDVAPTIIPTPMYRPRPANPDEIGNFIIENLKAANTDPTAPPYDTLL -------------------------------------------------------------- >In-frame_ENST00000398253_ENST00000429102_TCGA-DX-A48J-01A_ZFP90_chr16_68592471_+_CDH3_chr16_68710288_length(transcript)=3355nt_BP=291nt CTCCTGCCCCGGAGCCGGGCCCTGGCGAGGCAGGAATGGCCCCGAGGCCTCCGACCGCCGCGCCCCAGGAATCAGTGACATTCAAAGATG TGTCTGTGGACTTCACCCAGGAAGAATGGTACCATGTCGACCCTGCTCAGAGGAGCTTATACAGGGATGTGATGCTGGAGAACTATAGCC ACCTGGTTTCTCTTGGATATCAAGTTTCCAAGCCAGAGGTGATCTTCAAATTGGAGCAAGGAGAAGAGCCATGGATATCAGAGGGAGAAA TCCAACGACCTTTCTATCCAGTATTCATGGGCTGCCCTGGGCAAGAGCCAGCTCTGTTTAGCACTGATAATGATGACTTCACTGTGCGGA ATGGCGAGACAGTCCAGGAAAGAAGGTCACTGAAGGAAAGGAATCCATTGAAGATCTTCCCATCCAAACGTATCTTACGAAGACACAAGA GAGATTGGGTGGTTGCTCCAATATCTGTCCCTGAAAATGGCAAGGGTCCCTTCCCCCAGAGACTGAATCAGCTCAAGTCTAATAAAGATA GAGACACCAAGATTTTCTACAGCATCACGGGGCCGGGGGCAGACAGCCCCCCTGAGGGTGTCTTCGCTGTAGAGAAGGAGACAGGCTGGT TGTTGTTGAATAAGCCACTGGACCGGGAGGAGATTGCCAAGTATGAGCTCTTTGGCCACGCTGTGTCAGAGAATGGTGCCTCAGTGGAGG ACCCCATGAACATCTCCATCATCGTGACCGACCAGAATGACCACAAGCCCAAGTTTACCCAGGACACCTTCCGAGGGAGTGTCTTAGAGG GAGTCCTACCAGGTACTTCTGTGATGCAGGTGACAGCCACGGATGAGGATGATGCCATCTACACCTACAATGGGGTGGTTGCTTACTCCA TCCATAGCCAAGAACCAAAGGACCCACACGACCTCATGTTCACCATTCACCGGAGCACAGGCACCATCAGCGTCATCTCCAGTGGCCTGG ACCGGGAAAAAGTCCCTGAGTACACACTGACCATCCAGGCCACAGACATGGATGGGGACGGCTCCACCACCACGGCAGTGGCAGTAGTGG AGATCCTTGATGCCAATGACAATGCTCCCATGTTTGACCCCCAGAAGTACGAGGCCCATGTGCCTGAGAATGCAGTGGGCCATGAGGTGC AGAGGCTGACGGTCACTGATCTGGACGCCCCCAACTCACCAGCGTGGCGTGCCACCTACCTTATCATGGGCGGTGACGACGGGGACCATT TTACCATCACCACCCACCCTGAGAGCAACCAGGGCATCCTGACAACCAGGAAGGGTTTGGATTTTGAGGCCAAAAACCAGCACACCCTGT ACGTTGAAGTGACCAACGAGGCCCCTTTTGTGCTGAAGCTCCCAACCTCCACAGCCACCATAGTGGTCCACGTGGAGGATGTGAATGAGG CACCTGTGTTTGTCCCACCCTCCAAAGTCGTTGAGGTCCAGGAGGGCATCCCCACTGGGGAGCCTGTGTGTGTCTACACTGCAGAAGACC CTGACAAGGAGAATCAAAAGATCAGCTACCGCATCCTGAGAGACCCAGCAGGGTGGCTAGCCATGGACCCAGACAGTGGGCAGGTCACAG CTGTGGGCACCCTCGACCGTGAGGATGAGCAGTTTGTGAGGAACAACATCTATGAAGTCATGGTCTTGGCCATGGACAATGGAAGCCCTC CCACCACTGGCACGGGAACCCTTCTGCTAACACTGATTGATGTCAATGACCATGGCCCAGTCCCTGAGCCCCGTCAGATCACCATCTGCA ACCAAAGCCCTGTGCGCCAGGTGCTGAACATCACGGACAAGGACCTGTCTCCCCACACCTCCCCTTTCCAGGCCCAGCTCACAGATGACT CAGACATCTACTGGACGGCAGAGGTCAACGAGGAAGGTGACACAGTGGTCTTGTCCCTGAAGAAGTTCCTGAAGCAGGATACATATGACG TGCACCTTTCTCTGTCTGACCATGGCAACAAAGAGCAGCTGACGGTGATCAGGGCCACTGTGTGCGACTGCCATGGCCATGTCGAAACCT GCCCTGGACCCTGGAAGGGAGGTTTCATCCTCCCTGTGCTGGGGGCTGTCCTGGCTCTGCTGTTCCTCCTGCTGGTGCTGCTTTTGTTGG TGAGAAAGAAGCGGAAGATCAAGGAGCCCCTCCTACTCCCAGAAGATGACACCCGTGACAACGTCTTCTACTATGGCGAAGAGGGGGGTG GCGAAGAGGACCAGGACTATGACATCACCCAGCTCCACCGAGGTCTGGAGGCCAGGCCGGAGGTGGTTCTCCGCAATGACGTGGCACCAA CCATCATCCCGACACCCATGTACCGTCCTCGGCCAGCCAACCCAGATGAAATCGGCAACTTTATAATTGAGGGGAGGGGAGAGAGGGGCT CACAGAGAGGAAATGGAGGCTTGCAGCTGGCAAGAGGCAGGACCCGCCGCTCCTAACTACCTGTTCTCTGTTGCCGCAGAACCTGAAGGC GGCTAACACAGACCCCACAGCCCCGCCCTACGACACCCTCTTGGTGTTCGACTATGAGGGCAGCGGCTCCGACGCCGCGTCCCTGAGCTC CCTCACCTCCTCCGCCTCCGACCAAGACCAAGATTACGATTATCTGAACGAGTGGGGCAGCCGCTTCAAGAAGCTGGCAGACATGTACGG TGGCGGGGAGGACGACTAGGCGGCCTGCCTGCAGGGCTGGGGACCAAACGTCAGGCCACAGAGCATCTCCAAGGGGTCTCAGTTCCCCCT TCAGCTGAGGACTTCGGAGCTTGTCAGGAAGTGGCCGTAGCAACTTGGCGGAGACAGGCTATGAGTCTGACGTTAGAGTGGTGGCTTCCT TAGCCTTTCAGGATGGAGGAATGTGGGCAGTTTGACTTCAGCACTGAAAACCTCTCCACCTGGGCCAGGGTTGCCTCAGAGGCCAAGTTT CCAGAAGCCTCTTACCTGCCGTAAAATGCTCAACCCTGTGTCCTGGGCCTGGGCCTGCTGTGACTGACCTACAGTGGACTTTCTCTCTGG AATGGAACCTTCTTAGGCCTCCTGGTGCAACTTAATTTTTTTTTTTAATGCTATCTTCAAAACGTTAGAGAAAGTTCTTCAAAAGTGCAG CCCAGAGCTGCTGGGCCCACTGGCCGTCCTGCATTTCTGGTTTCCAGACCCCAATGCCTCCCATTCGGATGGATCTCTGCGTTTTTATAC TGAGTGTGCCTAGGTTGCCCCTTATTTTTTATTTTCCCTGTTGCGTTGCTATAGATGAAGGGTGAGGACAATCGTGTATATGTACTAGAA >In-frame_ENST00000398253_ENST00000429102_TCGA-DX-A48J-01A_ZFP90_chr16_68592471_+_CDH3_chr16_68710288_length(amino acids)=816AA_start in transcript=35_stop in transcript=2485 MAPRPPTAAPQESVTFKDVSVDFTQEEWYHVDPAQRSLYRDVMLENYSHLVSLGYQVSKPEVIFKLEQGEEPWISEGEIQRPFYPVFMGC PGQEPALFSTDNDDFTVRNGETVQERRSLKERNPLKIFPSKRILRRHKRDWVVAPISVPENGKGPFPQRLNQLKSNKDRDTKIFYSITGP GADSPPEGVFAVEKETGWLLLNKPLDREEIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFTQDTFRGSVLEGVLPGTSVMQVT ATDEDDAIYTYNGVVAYSIHSQEPKDPHDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDMDGDGSTTTAVAVVEILDANDNAPMF DPQKYEAHVPENAVGHEVQRLTVTDLDAPNSPAWRATYLIMGGDDGDHFTITTHPESNQGILTTRKGLDFEAKNQHTLYVEVTNEAPFVL KLPTSTATIVVHVEDVNEAPVFVPPSKVVEVQEGIPTGEPVCVYTAEDPDKENQKISYRILRDPAGWLAMDPDSGQVTAVGTLDREDEQF VRNNIYEVMVLAMDNGSPPTTGTGTLLLTLIDVNDHGPVPEPRQITICNQSPVRQVLNITDKDLSPHTSPFQAQLTDDSDIYWTAEVNEE GDTVVLSLKKFLKQDTYDVHLSLSDHGNKEQLTVIRATVCDCHGHVETCPGPWKGGFILPVLGAVLALLFLLLVLLLLVRKKRKIKEPLL LPEDDTRDNVFYYGEEGGGEEDQDYDITQLHRGLEARPEVVLRNDVAPTIIPTPMYRPRPANPDEIGNFIIEGRGERGSQRGNGGLQLAR -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for ZFP90-CDH3 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for ZFP90-CDH3 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for ZFP90-CDH3 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | CDH3 | C1832162 | HYPOTRICHOSIS, CONGENITAL, WITH JUVENILE MACULAR DYSTROPHY | 3 | CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT |
Tgene | CDH3 | C1857041 | Ectodermal dysplasia, ectrodactyly, and macular dystrophy | 3 | CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT |
Tgene | CDH3 | C0009324 | Ulcerative Colitis | 1 | CTD_human |
Tgene | CDH3 | C0010093 | Corpus Luteum Cyst | 1 | CTD_human |
Tgene | CDH3 | C0029927 | Ovarian Cysts | 1 | CTD_human |