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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Fusion gene:ZNF585A-CCDC3 (FusionGDB2 ID:101750)

Fusion Gene Summary for ZNF585A-CCDC3

check button Fusion gene summary
Fusion gene informationFusion gene name: ZNF585A-CCDC3
Fusion gene ID: 101750
HgeneTgene
Gene symbol

ZNF585A

CCDC3

Gene ID

199704

83643

Gene namezinc finger protein 585Acoiled-coil domain containing 3
SynonymsZfp27-
Cytomap

19q13.12

10p13

Type of geneprotein-codingprotein-coding
Descriptionzinc finger protein 585Acoiled-coil domain-containing protein 3fat/vessel-derived secretory proteinfavine
Modification date2020031320200327
UniProtAcc.

Q9UFE4

Ensembl transtripts involved in fusion geneENST00000588723, ENST00000356958, 
ENST00000292841, ENST00000392157, 
ENST00000355533, ENST00000588354, 
ENST00000378825, ENST00000378839, 
Fusion gene scores* DoF score6 X 6 X 5=1806 X 6 X 4=144
# samples 67
** MAII scorelog2(6/180*10)=-1.58496250072116
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(7/144*10)=-1.04064198449735
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: ZNF585A [Title/Abstract] AND CCDC3 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointZNF585A(37646766)-CCDC3(13040512), # samples:2
Anticipated loss of major functional domain due to fusion event.ZNF585A-CCDC3 seems lost the major protein functional domain in Hgene partner, which is a transcription factor due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check buttonFusion gene breakpoints across ZNF585A (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonFusion gene breakpoints across CCDC3 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4PRADTCGA-V1-A9O5ZNF585Achr19

37646766

-CCDC3chr10

13040512

-
ChimerDB4PRADTCGA-V1-A9O5ZNF585Achr19

37646766

-CCDC3chr10

13040512

-
ChimerDB4PRADTCGA-V1-A9O5-06AZNF585Achr19

37646767

-CCDC3chr10

13040512

-


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Fusion Gene ORF analysis for ZNF585A-CCDC3

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5UTR-3CDSENST00000588723ENST00000378825ZNF585Achr19

37646766

-CCDC3chr10

13040512

-
5UTR-5UTRENST00000588723ENST00000378839ZNF585Achr19

37646766

-CCDC3chr10

13040512

-
Frame-shiftENST00000356958ENST00000378825ZNF585Achr19

37646766

-CCDC3chr10

13040512

-
5CDS-5UTRENST00000356958ENST00000378839ZNF585Achr19

37646766

-CCDC3chr10

13040512

-
In-frameENST00000292841ENST00000378825ZNF585Achr19

37646766

-CCDC3chr10

13040512

-
5CDS-5UTRENST00000292841ENST00000378839ZNF585Achr19

37646766

-CCDC3chr10

13040512

-
Frame-shiftENST00000392157ENST00000378825ZNF585Achr19

37646766

-CCDC3chr10

13040512

-
5CDS-5UTRENST00000392157ENST00000378839ZNF585Achr19

37646766

-CCDC3chr10

13040512

-
In-frameENST00000355533ENST00000378825ZNF585Achr19

37646766

-CCDC3chr10

13040512

-
5CDS-5UTRENST00000355533ENST00000378839ZNF585Achr19

37646766

-CCDC3chr10

13040512

-
intron-3CDSENST00000588354ENST00000378825ZNF585Achr19

37646766

-CCDC3chr10

13040512

-
intron-5UTRENST00000588354ENST00000378839ZNF585Achr19

37646766

-CCDC3chr10

13040512

-
5UTR-3CDSENST00000588723ENST00000378825ZNF585Achr19

37646767

-CCDC3chr10

13040512

-
5UTR-5UTRENST00000588723ENST00000378839ZNF585Achr19

37646767

-CCDC3chr10

13040512

-
Frame-shiftENST00000356958ENST00000378825ZNF585Achr19

37646767

-CCDC3chr10

13040512

-
5CDS-5UTRENST00000356958ENST00000378839ZNF585Achr19

37646767

-CCDC3chr10

13040512

-
In-frameENST00000292841ENST00000378825ZNF585Achr19

37646767

-CCDC3chr10

13040512

-
5CDS-5UTRENST00000292841ENST00000378839ZNF585Achr19

37646767

-CCDC3chr10

13040512

-
Frame-shiftENST00000392157ENST00000378825ZNF585Achr19

37646767

-CCDC3chr10

13040512

-
5CDS-5UTRENST00000392157ENST00000378839ZNF585Achr19

37646767

-CCDC3chr10

13040512

-
In-frameENST00000355533ENST00000378825ZNF585Achr19

37646767

-CCDC3chr10

13040512

-
5CDS-5UTRENST00000355533ENST00000378839ZNF585Achr19

37646767

-CCDC3chr10

13040512

-
intron-3CDSENST00000588354ENST00000378825ZNF585Achr19

37646767

-CCDC3chr10

13040512

-
intron-5UTRENST00000588354ENST00000378839ZNF585Achr19

37646767

-CCDC3chr10

13040512

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000292841ZNF585Achr1937646766-ENST00000378825CCDC3chr1013040512-2853625462914150
ENST00000355533ZNF585Achr1937646766-ENST00000378825CCDC3chr1013040512-2853625462914150
ENST00000292841ZNF585Achr1937646767-ENST00000378825CCDC3chr1013040512-2853625462914150
ENST00000355533ZNF585Achr1937646767-ENST00000378825CCDC3chr1013040512-2853625462914150

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000292841ENST00000378825ZNF585Achr1937646766-CCDC3chr1013040512-0.0308529440.969147
ENST00000355533ENST00000378825ZNF585Achr1937646766-CCDC3chr1013040512-0.0308529440.969147
ENST00000292841ENST00000378825ZNF585Achr1937646767-CCDC3chr1013040512-0.0308529440.969147
ENST00000355533ENST00000378825ZNF585Achr1937646767-CCDC3chr1013040512-0.0308529440.969147

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Fusion Genomic Features for ZNF585A-CCDC3


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for ZNF585A-CCDC3


check button Go to

FGviewer for the breakpoints of chr19:37646766-chr10:13040512

.
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.CCDC3

Q9UFE4

FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.FUNCTION: Required for assembly of dynein regulatory complex (DRC) and inner dynein arm (IDA) complexes, which are responsible for ciliary beat regulation, thereby playing a central role in motility in cilia and flagella (PubMed:21131972). Probably acts together with CCDC40 to form a molecular ruler that determines the 96 nanometer (nm) repeat length and arrangements of components in cilia and flagella (By similarity). Not required for outer dynein arm complexes assembly (PubMed:21131972). {ECO:0000250|UniProtKB:A8IQT2, ECO:0000269|PubMed:21131972}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneZNF585Achr19:37646766chr10:13040512ENST00000356958-4527_9797.33333333333333770.0DomainKRAB
HgeneZNF585Achr19:37646767chr10:13040512ENST00000356958-4527_9797.33333333333333770.0DomainKRAB
TgeneCCDC3chr19:37646766chr10:13040512ENST0000037882503188_251124.66666666666667271.0Coiled coilOntology_term=ECO:0000255
TgeneCCDC3chr19:37646767chr10:13040512ENST0000037882503188_251124.66666666666667271.0Coiled coilOntology_term=ECO:0000255

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneZNF585Achr19:37646766chr10:13040512ENST00000292841-5627_9742.333333333333336715.0DomainKRAB
HgeneZNF585Achr19:37646766chr10:13040512ENST00000392157-5627_9742.333333333333336715.0DomainKRAB
HgeneZNF585Achr19:37646767chr10:13040512ENST00000292841-5627_9742.333333333333336715.0DomainKRAB
HgeneZNF585Achr19:37646767chr10:13040512ENST00000392157-5627_9742.333333333333336715.0DomainKRAB
HgeneZNF585Achr19:37646766chr10:13040512ENST00000292841-56158_18042.333333333333336715.0Zinc fingerC2H2-type 1
HgeneZNF585Achr19:37646766chr10:13040512ENST00000292841-56186_20842.333333333333336715.0Zinc fingerC2H2-type 2
HgeneZNF585Achr19:37646766chr10:13040512ENST00000292841-56214_23642.333333333333336715.0Zinc fingerC2H2-type 3
HgeneZNF585Achr19:37646766chr10:13040512ENST00000292841-56242_26442.333333333333336715.0Zinc fingerC2H2-type 4
HgeneZNF585Achr19:37646766chr10:13040512ENST00000292841-56270_29242.333333333333336715.0Zinc fingerC2H2-type 5
HgeneZNF585Achr19:37646766chr10:13040512ENST00000292841-56298_32042.333333333333336715.0Zinc fingerC2H2-type 6
HgeneZNF585Achr19:37646766chr10:13040512ENST00000292841-56326_34842.333333333333336715.0Zinc fingerC2H2-type 7%3B degenerate
HgeneZNF585Achr19:37646766chr10:13040512ENST00000292841-56354_37642.333333333333336715.0Zinc fingerC2H2-type 8
HgeneZNF585Achr19:37646766chr10:13040512ENST00000292841-56382_40442.333333333333336715.0Zinc fingerC2H2-type 9
HgeneZNF585Achr19:37646766chr10:13040512ENST00000292841-56410_43242.333333333333336715.0Zinc fingerC2H2-type 10
HgeneZNF585Achr19:37646766chr10:13040512ENST00000292841-56438_46042.333333333333336715.0Zinc fingerC2H2-type 11
HgeneZNF585Achr19:37646766chr10:13040512ENST00000292841-56466_48842.333333333333336715.0Zinc fingerC2H2-type 12
HgeneZNF585Achr19:37646766chr10:13040512ENST00000292841-56494_51642.333333333333336715.0Zinc fingerC2H2-type 13
HgeneZNF585Achr19:37646766chr10:13040512ENST00000292841-56522_54442.333333333333336715.0Zinc fingerC2H2-type 14
HgeneZNF585Achr19:37646766chr10:13040512ENST00000292841-56550_57242.333333333333336715.0Zinc fingerC2H2-type 15
HgeneZNF585Achr19:37646766chr10:13040512ENST00000292841-56578_60042.333333333333336715.0Zinc fingerC2H2-type 16
HgeneZNF585Achr19:37646766chr10:13040512ENST00000292841-56606_62842.333333333333336715.0Zinc fingerC2H2-type 17
HgeneZNF585Achr19:37646766chr10:13040512ENST00000292841-56634_65642.333333333333336715.0Zinc fingerC2H2-type 18
HgeneZNF585Achr19:37646766chr10:13040512ENST00000292841-56662_68442.333333333333336715.0Zinc fingerC2H2-type 19
HgeneZNF585Achr19:37646766chr10:13040512ENST00000292841-56690_71242.333333333333336715.0Zinc fingerC2H2-type 20
HgeneZNF585Achr19:37646766chr10:13040512ENST00000292841-56718_74042.333333333333336715.0Zinc fingerC2H2-type 21
HgeneZNF585Achr19:37646766chr10:13040512ENST00000292841-56746_76842.333333333333336715.0Zinc fingerC2H2-type 22
HgeneZNF585Achr19:37646766chr10:13040512ENST00000356958-45158_18097.33333333333333770.0Zinc fingerC2H2-type 1
HgeneZNF585Achr19:37646766chr10:13040512ENST00000356958-45186_20897.33333333333333770.0Zinc fingerC2H2-type 2
HgeneZNF585Achr19:37646766chr10:13040512ENST00000356958-45214_23697.33333333333333770.0Zinc fingerC2H2-type 3
HgeneZNF585Achr19:37646766chr10:13040512ENST00000356958-45242_26497.33333333333333770.0Zinc fingerC2H2-type 4
HgeneZNF585Achr19:37646766chr10:13040512ENST00000356958-45270_29297.33333333333333770.0Zinc fingerC2H2-type 5
HgeneZNF585Achr19:37646766chr10:13040512ENST00000356958-45298_32097.33333333333333770.0Zinc fingerC2H2-type 6
HgeneZNF585Achr19:37646766chr10:13040512ENST00000356958-45326_34897.33333333333333770.0Zinc fingerC2H2-type 7%3B degenerate
HgeneZNF585Achr19:37646766chr10:13040512ENST00000356958-45354_37697.33333333333333770.0Zinc fingerC2H2-type 8
HgeneZNF585Achr19:37646766chr10:13040512ENST00000356958-45382_40497.33333333333333770.0Zinc fingerC2H2-type 9
HgeneZNF585Achr19:37646766chr10:13040512ENST00000356958-45410_43297.33333333333333770.0Zinc fingerC2H2-type 10
HgeneZNF585Achr19:37646766chr10:13040512ENST00000356958-45438_46097.33333333333333770.0Zinc fingerC2H2-type 11
HgeneZNF585Achr19:37646766chr10:13040512ENST00000356958-45466_48897.33333333333333770.0Zinc fingerC2H2-type 12
HgeneZNF585Achr19:37646766chr10:13040512ENST00000356958-45494_51697.33333333333333770.0Zinc fingerC2H2-type 13
HgeneZNF585Achr19:37646766chr10:13040512ENST00000356958-45522_54497.33333333333333770.0Zinc fingerC2H2-type 14
HgeneZNF585Achr19:37646766chr10:13040512ENST00000356958-45550_57297.33333333333333770.0Zinc fingerC2H2-type 15
HgeneZNF585Achr19:37646766chr10:13040512ENST00000356958-45578_60097.33333333333333770.0Zinc fingerC2H2-type 16
HgeneZNF585Achr19:37646766chr10:13040512ENST00000356958-45606_62897.33333333333333770.0Zinc fingerC2H2-type 17
HgeneZNF585Achr19:37646766chr10:13040512ENST00000356958-45634_65697.33333333333333770.0Zinc fingerC2H2-type 18
HgeneZNF585Achr19:37646766chr10:13040512ENST00000356958-45662_68497.33333333333333770.0Zinc fingerC2H2-type 19
HgeneZNF585Achr19:37646766chr10:13040512ENST00000356958-45690_71297.33333333333333770.0Zinc fingerC2H2-type 20
HgeneZNF585Achr19:37646766chr10:13040512ENST00000356958-45718_74097.33333333333333770.0Zinc fingerC2H2-type 21
HgeneZNF585Achr19:37646766chr10:13040512ENST00000356958-45746_76897.33333333333333770.0Zinc fingerC2H2-type 22
HgeneZNF585Achr19:37646766chr10:13040512ENST00000392157-56158_18042.333333333333336715.0Zinc fingerC2H2-type 1
HgeneZNF585Achr19:37646766chr10:13040512ENST00000392157-56186_20842.333333333333336715.0Zinc fingerC2H2-type 2
HgeneZNF585Achr19:37646766chr10:13040512ENST00000392157-56214_23642.333333333333336715.0Zinc fingerC2H2-type 3
HgeneZNF585Achr19:37646766chr10:13040512ENST00000392157-56242_26442.333333333333336715.0Zinc fingerC2H2-type 4
HgeneZNF585Achr19:37646766chr10:13040512ENST00000392157-56270_29242.333333333333336715.0Zinc fingerC2H2-type 5
HgeneZNF585Achr19:37646766chr10:13040512ENST00000392157-56298_32042.333333333333336715.0Zinc fingerC2H2-type 6
HgeneZNF585Achr19:37646766chr10:13040512ENST00000392157-56326_34842.333333333333336715.0Zinc fingerC2H2-type 7%3B degenerate
HgeneZNF585Achr19:37646766chr10:13040512ENST00000392157-56354_37642.333333333333336715.0Zinc fingerC2H2-type 8
HgeneZNF585Achr19:37646766chr10:13040512ENST00000392157-56382_40442.333333333333336715.0Zinc fingerC2H2-type 9
HgeneZNF585Achr19:37646766chr10:13040512ENST00000392157-56410_43242.333333333333336715.0Zinc fingerC2H2-type 10
HgeneZNF585Achr19:37646766chr10:13040512ENST00000392157-56438_46042.333333333333336715.0Zinc fingerC2H2-type 11
HgeneZNF585Achr19:37646766chr10:13040512ENST00000392157-56466_48842.333333333333336715.0Zinc fingerC2H2-type 12
HgeneZNF585Achr19:37646766chr10:13040512ENST00000392157-56494_51642.333333333333336715.0Zinc fingerC2H2-type 13
HgeneZNF585Achr19:37646766chr10:13040512ENST00000392157-56522_54442.333333333333336715.0Zinc fingerC2H2-type 14
HgeneZNF585Achr19:37646766chr10:13040512ENST00000392157-56550_57242.333333333333336715.0Zinc fingerC2H2-type 15
HgeneZNF585Achr19:37646766chr10:13040512ENST00000392157-56578_60042.333333333333336715.0Zinc fingerC2H2-type 16
HgeneZNF585Achr19:37646766chr10:13040512ENST00000392157-56606_62842.333333333333336715.0Zinc fingerC2H2-type 17
HgeneZNF585Achr19:37646766chr10:13040512ENST00000392157-56634_65642.333333333333336715.0Zinc fingerC2H2-type 18
HgeneZNF585Achr19:37646766chr10:13040512ENST00000392157-56662_68442.333333333333336715.0Zinc fingerC2H2-type 19
HgeneZNF585Achr19:37646766chr10:13040512ENST00000392157-56690_71242.333333333333336715.0Zinc fingerC2H2-type 20
HgeneZNF585Achr19:37646766chr10:13040512ENST00000392157-56718_74042.333333333333336715.0Zinc fingerC2H2-type 21
HgeneZNF585Achr19:37646766chr10:13040512ENST00000392157-56746_76842.333333333333336715.0Zinc fingerC2H2-type 22
HgeneZNF585Achr19:37646767chr10:13040512ENST00000292841-56158_18042.333333333333336715.0Zinc fingerC2H2-type 1
HgeneZNF585Achr19:37646767chr10:13040512ENST00000292841-56186_20842.333333333333336715.0Zinc fingerC2H2-type 2
HgeneZNF585Achr19:37646767chr10:13040512ENST00000292841-56214_23642.333333333333336715.0Zinc fingerC2H2-type 3
HgeneZNF585Achr19:37646767chr10:13040512ENST00000292841-56242_26442.333333333333336715.0Zinc fingerC2H2-type 4
HgeneZNF585Achr19:37646767chr10:13040512ENST00000292841-56270_29242.333333333333336715.0Zinc fingerC2H2-type 5
HgeneZNF585Achr19:37646767chr10:13040512ENST00000292841-56298_32042.333333333333336715.0Zinc fingerC2H2-type 6
HgeneZNF585Achr19:37646767chr10:13040512ENST00000292841-56326_34842.333333333333336715.0Zinc fingerC2H2-type 7%3B degenerate
HgeneZNF585Achr19:37646767chr10:13040512ENST00000292841-56354_37642.333333333333336715.0Zinc fingerC2H2-type 8
HgeneZNF585Achr19:37646767chr10:13040512ENST00000292841-56382_40442.333333333333336715.0Zinc fingerC2H2-type 9
HgeneZNF585Achr19:37646767chr10:13040512ENST00000292841-56410_43242.333333333333336715.0Zinc fingerC2H2-type 10
HgeneZNF585Achr19:37646767chr10:13040512ENST00000292841-56438_46042.333333333333336715.0Zinc fingerC2H2-type 11
HgeneZNF585Achr19:37646767chr10:13040512ENST00000292841-56466_48842.333333333333336715.0Zinc fingerC2H2-type 12
HgeneZNF585Achr19:37646767chr10:13040512ENST00000292841-56494_51642.333333333333336715.0Zinc fingerC2H2-type 13
HgeneZNF585Achr19:37646767chr10:13040512ENST00000292841-56522_54442.333333333333336715.0Zinc fingerC2H2-type 14
HgeneZNF585Achr19:37646767chr10:13040512ENST00000292841-56550_57242.333333333333336715.0Zinc fingerC2H2-type 15
HgeneZNF585Achr19:37646767chr10:13040512ENST00000292841-56578_60042.333333333333336715.0Zinc fingerC2H2-type 16
HgeneZNF585Achr19:37646767chr10:13040512ENST00000292841-56606_62842.333333333333336715.0Zinc fingerC2H2-type 17
HgeneZNF585Achr19:37646767chr10:13040512ENST00000292841-56634_65642.333333333333336715.0Zinc fingerC2H2-type 18
HgeneZNF585Achr19:37646767chr10:13040512ENST00000292841-56662_68442.333333333333336715.0Zinc fingerC2H2-type 19
HgeneZNF585Achr19:37646767chr10:13040512ENST00000292841-56690_71242.333333333333336715.0Zinc fingerC2H2-type 20
HgeneZNF585Achr19:37646767chr10:13040512ENST00000292841-56718_74042.333333333333336715.0Zinc fingerC2H2-type 21
HgeneZNF585Achr19:37646767chr10:13040512ENST00000292841-56746_76842.333333333333336715.0Zinc fingerC2H2-type 22
HgeneZNF585Achr19:37646767chr10:13040512ENST00000356958-45158_18097.33333333333333770.0Zinc fingerC2H2-type 1
HgeneZNF585Achr19:37646767chr10:13040512ENST00000356958-45186_20897.33333333333333770.0Zinc fingerC2H2-type 2
HgeneZNF585Achr19:37646767chr10:13040512ENST00000356958-45214_23697.33333333333333770.0Zinc fingerC2H2-type 3
HgeneZNF585Achr19:37646767chr10:13040512ENST00000356958-45242_26497.33333333333333770.0Zinc fingerC2H2-type 4
HgeneZNF585Achr19:37646767chr10:13040512ENST00000356958-45270_29297.33333333333333770.0Zinc fingerC2H2-type 5
HgeneZNF585Achr19:37646767chr10:13040512ENST00000356958-45298_32097.33333333333333770.0Zinc fingerC2H2-type 6
HgeneZNF585Achr19:37646767chr10:13040512ENST00000356958-45326_34897.33333333333333770.0Zinc fingerC2H2-type 7%3B degenerate
HgeneZNF585Achr19:37646767chr10:13040512ENST00000356958-45354_37697.33333333333333770.0Zinc fingerC2H2-type 8
HgeneZNF585Achr19:37646767chr10:13040512ENST00000356958-45382_40497.33333333333333770.0Zinc fingerC2H2-type 9
HgeneZNF585Achr19:37646767chr10:13040512ENST00000356958-45410_43297.33333333333333770.0Zinc fingerC2H2-type 10
HgeneZNF585Achr19:37646767chr10:13040512ENST00000356958-45438_46097.33333333333333770.0Zinc fingerC2H2-type 11
HgeneZNF585Achr19:37646767chr10:13040512ENST00000356958-45466_48897.33333333333333770.0Zinc fingerC2H2-type 12
HgeneZNF585Achr19:37646767chr10:13040512ENST00000356958-45494_51697.33333333333333770.0Zinc fingerC2H2-type 13
HgeneZNF585Achr19:37646767chr10:13040512ENST00000356958-45522_54497.33333333333333770.0Zinc fingerC2H2-type 14
HgeneZNF585Achr19:37646767chr10:13040512ENST00000356958-45550_57297.33333333333333770.0Zinc fingerC2H2-type 15
HgeneZNF585Achr19:37646767chr10:13040512ENST00000356958-45578_60097.33333333333333770.0Zinc fingerC2H2-type 16
HgeneZNF585Achr19:37646767chr10:13040512ENST00000356958-45606_62897.33333333333333770.0Zinc fingerC2H2-type 17
HgeneZNF585Achr19:37646767chr10:13040512ENST00000356958-45634_65697.33333333333333770.0Zinc fingerC2H2-type 18
HgeneZNF585Achr19:37646767chr10:13040512ENST00000356958-45662_68497.33333333333333770.0Zinc fingerC2H2-type 19
HgeneZNF585Achr19:37646767chr10:13040512ENST00000356958-45690_71297.33333333333333770.0Zinc fingerC2H2-type 20
HgeneZNF585Achr19:37646767chr10:13040512ENST00000356958-45718_74097.33333333333333770.0Zinc fingerC2H2-type 21
HgeneZNF585Achr19:37646767chr10:13040512ENST00000356958-45746_76897.33333333333333770.0Zinc fingerC2H2-type 22
HgeneZNF585Achr19:37646767chr10:13040512ENST00000392157-56158_18042.333333333333336715.0Zinc fingerC2H2-type 1
HgeneZNF585Achr19:37646767chr10:13040512ENST00000392157-56186_20842.333333333333336715.0Zinc fingerC2H2-type 2
HgeneZNF585Achr19:37646767chr10:13040512ENST00000392157-56214_23642.333333333333336715.0Zinc fingerC2H2-type 3
HgeneZNF585Achr19:37646767chr10:13040512ENST00000392157-56242_26442.333333333333336715.0Zinc fingerC2H2-type 4
HgeneZNF585Achr19:37646767chr10:13040512ENST00000392157-56270_29242.333333333333336715.0Zinc fingerC2H2-type 5
HgeneZNF585Achr19:37646767chr10:13040512ENST00000392157-56298_32042.333333333333336715.0Zinc fingerC2H2-type 6
HgeneZNF585Achr19:37646767chr10:13040512ENST00000392157-56326_34842.333333333333336715.0Zinc fingerC2H2-type 7%3B degenerate
HgeneZNF585Achr19:37646767chr10:13040512ENST00000392157-56354_37642.333333333333336715.0Zinc fingerC2H2-type 8
HgeneZNF585Achr19:37646767chr10:13040512ENST00000392157-56382_40442.333333333333336715.0Zinc fingerC2H2-type 9
HgeneZNF585Achr19:37646767chr10:13040512ENST00000392157-56410_43242.333333333333336715.0Zinc fingerC2H2-type 10
HgeneZNF585Achr19:37646767chr10:13040512ENST00000392157-56438_46042.333333333333336715.0Zinc fingerC2H2-type 11
HgeneZNF585Achr19:37646767chr10:13040512ENST00000392157-56466_48842.333333333333336715.0Zinc fingerC2H2-type 12
HgeneZNF585Achr19:37646767chr10:13040512ENST00000392157-56494_51642.333333333333336715.0Zinc fingerC2H2-type 13
HgeneZNF585Achr19:37646767chr10:13040512ENST00000392157-56522_54442.333333333333336715.0Zinc fingerC2H2-type 14
HgeneZNF585Achr19:37646767chr10:13040512ENST00000392157-56550_57242.333333333333336715.0Zinc fingerC2H2-type 15
HgeneZNF585Achr19:37646767chr10:13040512ENST00000392157-56578_60042.333333333333336715.0Zinc fingerC2H2-type 16
HgeneZNF585Achr19:37646767chr10:13040512ENST00000392157-56606_62842.333333333333336715.0Zinc fingerC2H2-type 17
HgeneZNF585Achr19:37646767chr10:13040512ENST00000392157-56634_65642.333333333333336715.0Zinc fingerC2H2-type 18
HgeneZNF585Achr19:37646767chr10:13040512ENST00000392157-56662_68442.333333333333336715.0Zinc fingerC2H2-type 19
HgeneZNF585Achr19:37646767chr10:13040512ENST00000392157-56690_71242.333333333333336715.0Zinc fingerC2H2-type 20
HgeneZNF585Achr19:37646767chr10:13040512ENST00000392157-56718_74042.333333333333336715.0Zinc fingerC2H2-type 21
HgeneZNF585Achr19:37646767chr10:13040512ENST00000392157-56746_76842.333333333333336715.0Zinc fingerC2H2-type 22


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Fusion Gene Sequence for ZNF585A-CCDC3


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>In-frame_ENST00000292841_ENST00000378825_TCGA-V1-A9O5_ZNF585A_chr19_37646766_-_CCDC3_chr10_13040512_length(transcript)=2853nt_BP=625nt
GGACCGGAAGTGGAAGTGGTCTTCCAAGGCTTTTTTGCCGCTGGTGTCAGGAGTATTTTCATATTCCAATACCGATAAATCTTTGAGGTT
TCTGGGTGTCTCTGGGGAGCCCCTGGGCCAGATTTTCCTCTAGACTCCAGCCCATCTCTTCAGAGCAGCTCTGCTTGAGTTCACAGATGA
CTGCCAAGCTTCAGACACCCTACAGAAAAAGGGTTGAGACCCAGTGTGGCCATGCCAGCTAATTGGACCTCACCTCAGAAATCCTCAGCC
CTGGCTCCAGAGGATCATGGCAGCTCCTATGAGTGTTAACCTTGATGCCTGAAAGAACTGGAAATTATGAAGATAGATTCAGAAGTCAAA
TATGTTAACTAACTGCATTGAAGAGTAGAAGAAAACAATAGCCTAGGATCAGTGTCCTTCAGGGATGTGGCTATCGATTTCAGCAGAGAG
GAATGGCGGCACCTGGACCCTTCTCAGAGAAACCTGTACCGGGATGTGATGCTGGAGACCTACAGCCACCTGCTCTCAGTAGGATATCAA
GTTCCTGAAGCAGAGGTGGTCATGTTGGAGCAAGGAAAGGAACCATGGGCACTGCAGGGTGAGAGGCCACGTCAGAGCTGCCCAGGATGG
ATGAAAATTATAACCTCTTGCCTCACGGAGTCAATTTCCAAGATGCCATCTTCCCAGACACTCAAGAGAACAGAAGGATGTTTTCTAGCC
TTTTCCAGTTTTCAAACTGTTCGCAAGGGCAGCAGCTGGCGACTTTCTCCAGTGACTGGGAAATCCAGGAAGACAGTAGGCTCATGTGCT
CCTCGGTGCAGAAGGCCTTGTTTGAGGAGGAGGACCACGTCAAGAAACTGCAGCAGAAAGTGGCCACCCTGGAGAAGCGCAACCGGCAGC
TCCGGGAGCGAGTGAAGAAGGTCAAGAGGTCCTTGCGGCAGGCGCGTAAGAAGGGCCGCCACCTGGAGCTGGCGAACCAGAAACTCAGTG
AGAAGCTGGCGGCGGGCGCGCTGCCGCACATCAATGCCCGGGGGCCCGTGCGCCCCCCCTACCTGCGGGGGTAACGGGCCTGGGGGCTGC
CAGGTGTGCAGGGCCAATCCTGACGGTAATTGAGAATGAGTGAGGTTTCGTACATGCAGCTATTTCAAGGGTTGTAAGAGTTTTTGTTTT
TAATCACGCATTTGGTAGAGTCTAAATGGATAAAATGCAAGGCTTGCTTTCCCCTTGGGTGCTGGCCTCAATGTCAGACCCCACGCGCTG
CCCCTTCCTGGCCTGACCCCAGACGCAGTGCCTGGCAGTCCAGAGGCAGTGGGATCCCTGAGTGCTGAATGCTCGCCTGCAGAGCAGCCC
AGAAAGAGCCCTGACTGGGGAGAGAACATTTTAGAATCTCTAGTGTAAAAGACATCAACGTGCTTAGCCTTTATTTCAGAAAAAAATCAG
GGTGGTTCCCAGCTCCCCAGTCCAGGACAACCATTAGTCCTGATGAGTGAGCTGACGCTGGTGCTGGAACCTGCTGGCACCTCACTGGCC
ACATCTTTGGAAGGGGATGGTGGCCTTGCATCCAAGATGCCTGAAAATCAGCACGTGCAGGGCCTCCCTATCCAGCCAGCATTTTCCTTC
CAGCTGAGGCAGGTGAAGACTTCATAAGCTCATCACAGGGGAGGGAATTAGGAGCAGGGCAGCAGGTAATTAAACAAGATAAATTATACC
TGATTTCCAACACCAGCTACAAAGAGTTGAAGATGATACCTATGGGTCGCGTTAACACAGGGGGCAACTGCCTTGATCGGCCTGCCATGG
GTCATCAGACTGCTTCCTAAATTGAGAGAAACTGAGCAATCTCTCAGCCACTGCTATAGTCTAACTTCTTGTTTGCTGAGTAATTGTTTC
TAATGTCTCTGAACTCAAAGTGAGGTGCTCCAAGACGCTGTGAACTTCTGCAAAGACACCTCCTTACCTACTGGGATCACGTGACCTGAC
CTCACTCCCAGCCAGGCTCCCAAAGGGCTCATTCCAGCCATTCCAATCTCTTCTTCTTTATGCAAACACTTTTCCCCCACAACAAGCCTT
GTTTGTTCCGATAGGAATACGTGTACGTCAGTGCACTTGTCCTTACGTCAGTTCCTTACACCACCAAAGCACTTCACCTTTCTGGAAATA
AAACTTTTAAGACACTACTATAAGTAAAAATGAGAGTATTCACTAGACTTATTGCTCAGGCACATTTGAGTGGGTCCCAGCTGTGTGATT
AAGAAGTCAACTGGGTGGCCTTTTCTGGGTTATCTTCTGATCATGGCCTTTCAACCCAACAAGGGCCCTTCCCTGCTCTTCCACCAGTAA
AGGCTCCTGGCCTCTCATCAGGATCTGCCCCCCAGAGACCCCCCCCAGACACTGCAGGGCCTGGTGATGCTGTCCTCTGTACCGGAAATG
GCAGGCACTGTCAGATTTCCACTCTTCTGCCTTTAGGAAGGCTGGGTGCTTCTTGCTCTGACAGCCAGTCTGGGGAGATGACTCTTACGT
TGCTTGAGTCTTGGTGGCAGGCTGCTGTCCACGGGGGAGAAGTCTCTGCTCTGGACTGGACAGAAGAGAGACTTTTACCCTGGGGCACTC
ACACGGCCAAGCTTCTGCCACCACTTCATTAGCTGTATTCTCCATAGTATGGTGAAATAGCAGGTGCGTCTTCTAGTTTATTCCTCCTGG
GGACATTTCCTCAAAGCAGTTTTGCGCCCCCGCAAGGGAATGGTCAGCCTAAGGGTAATGTACAGCCCGTGCTTGGAGAACCATGGAAGC

>In-frame_ENST00000292841_ENST00000378825_TCGA-V1-A9O5_ZNF585A_chr19_37646766_-_CCDC3_chr10_13040512_length(amino acids)=150AA_start in transcript=462_stop in transcript=914
MDPSQRNLYRDVMLETYSHLLSVGYQVPEAEVVMLEQGKEPWALQGERPRQSCPGWMKIITSCLTESISKMPSSQTLKRTEGCFLAFSSF

--------------------------------------------------------------
>In-frame_ENST00000355533_ENST00000378825_TCGA-V1-A9O5_ZNF585A_chr19_37646766_-_CCDC3_chr10_13040512_length(transcript)=2853nt_BP=625nt
GGACCGGAAGTGGAAGTGGTCTTCCAAGGCTTTTTTGCCGCTGGTGTCAGGAGTATTTTCATATTCCAATACCGATAAATCTTTGAGGTT
TCTGGGTGTCTCTGGGGAGCCCCTGGGCCAGATTTTCCTCTAGACTCCAGCCCATCTCTTCAGAGCAGCTCTGCTTGAGTTCACAGATGA
CTGCCAAGCTTCAGACACCCTACAGAAAAAGGGTTGAGACCCAGTGTGGCCATGCCAGCTAATTGGACCTCACCTCAGAAATCCTCAGCC
CTGGCTCCAGAGGATCATGGCAGCTCCTATGAGTGTTAACCTTGATGCCTGAAAGAACTGGAAATTATGAAGATAGATTCAGAAGTCAAA
TATGTTAACTAACTGCATTGAAGAGTAGAAGAAAACAATAGCCTAGGATCAGTGTCCTTCAGGGATGTGGCTATCGATTTCAGCAGAGAG
GAATGGCGGCACCTGGACCCTTCTCAGAGAAACCTGTACCGGGATGTGATGCTGGAGACCTACAGCCACCTGCTCTCAGTAGGATATCAA
GTTCCTGAAGCAGAGGTGGTCATGTTGGAGCAAGGAAAGGAACCATGGGCACTGCAGGGTGAGAGGCCACGTCAGAGCTGCCCAGGATGG
ATGAAAATTATAACCTCTTGCCTCACGGAGTCAATTTCCAAGATGCCATCTTCCCAGACACTCAAGAGAACAGAAGGATGTTTTCTAGCC
TTTTCCAGTTTTCAAACTGTTCGCAAGGGCAGCAGCTGGCGACTTTCTCCAGTGACTGGGAAATCCAGGAAGACAGTAGGCTCATGTGCT
CCTCGGTGCAGAAGGCCTTGTTTGAGGAGGAGGACCACGTCAAGAAACTGCAGCAGAAAGTGGCCACCCTGGAGAAGCGCAACCGGCAGC
TCCGGGAGCGAGTGAAGAAGGTCAAGAGGTCCTTGCGGCAGGCGCGTAAGAAGGGCCGCCACCTGGAGCTGGCGAACCAGAAACTCAGTG
AGAAGCTGGCGGCGGGCGCGCTGCCGCACATCAATGCCCGGGGGCCCGTGCGCCCCCCCTACCTGCGGGGGTAACGGGCCTGGGGGCTGC
CAGGTGTGCAGGGCCAATCCTGACGGTAATTGAGAATGAGTGAGGTTTCGTACATGCAGCTATTTCAAGGGTTGTAAGAGTTTTTGTTTT
TAATCACGCATTTGGTAGAGTCTAAATGGATAAAATGCAAGGCTTGCTTTCCCCTTGGGTGCTGGCCTCAATGTCAGACCCCACGCGCTG
CCCCTTCCTGGCCTGACCCCAGACGCAGTGCCTGGCAGTCCAGAGGCAGTGGGATCCCTGAGTGCTGAATGCTCGCCTGCAGAGCAGCCC
AGAAAGAGCCCTGACTGGGGAGAGAACATTTTAGAATCTCTAGTGTAAAAGACATCAACGTGCTTAGCCTTTATTTCAGAAAAAAATCAG
GGTGGTTCCCAGCTCCCCAGTCCAGGACAACCATTAGTCCTGATGAGTGAGCTGACGCTGGTGCTGGAACCTGCTGGCACCTCACTGGCC
ACATCTTTGGAAGGGGATGGTGGCCTTGCATCCAAGATGCCTGAAAATCAGCACGTGCAGGGCCTCCCTATCCAGCCAGCATTTTCCTTC
CAGCTGAGGCAGGTGAAGACTTCATAAGCTCATCACAGGGGAGGGAATTAGGAGCAGGGCAGCAGGTAATTAAACAAGATAAATTATACC
TGATTTCCAACACCAGCTACAAAGAGTTGAAGATGATACCTATGGGTCGCGTTAACACAGGGGGCAACTGCCTTGATCGGCCTGCCATGG
GTCATCAGACTGCTTCCTAAATTGAGAGAAACTGAGCAATCTCTCAGCCACTGCTATAGTCTAACTTCTTGTTTGCTGAGTAATTGTTTC
TAATGTCTCTGAACTCAAAGTGAGGTGCTCCAAGACGCTGTGAACTTCTGCAAAGACACCTCCTTACCTACTGGGATCACGTGACCTGAC
CTCACTCCCAGCCAGGCTCCCAAAGGGCTCATTCCAGCCATTCCAATCTCTTCTTCTTTATGCAAACACTTTTCCCCCACAACAAGCCTT
GTTTGTTCCGATAGGAATACGTGTACGTCAGTGCACTTGTCCTTACGTCAGTTCCTTACACCACCAAAGCACTTCACCTTTCTGGAAATA
AAACTTTTAAGACACTACTATAAGTAAAAATGAGAGTATTCACTAGACTTATTGCTCAGGCACATTTGAGTGGGTCCCAGCTGTGTGATT
AAGAAGTCAACTGGGTGGCCTTTTCTGGGTTATCTTCTGATCATGGCCTTTCAACCCAACAAGGGCCCTTCCCTGCTCTTCCACCAGTAA
AGGCTCCTGGCCTCTCATCAGGATCTGCCCCCCAGAGACCCCCCCCAGACACTGCAGGGCCTGGTGATGCTGTCCTCTGTACCGGAAATG
GCAGGCACTGTCAGATTTCCACTCTTCTGCCTTTAGGAAGGCTGGGTGCTTCTTGCTCTGACAGCCAGTCTGGGGAGATGACTCTTACGT
TGCTTGAGTCTTGGTGGCAGGCTGCTGTCCACGGGGGAGAAGTCTCTGCTCTGGACTGGACAGAAGAGAGACTTTTACCCTGGGGCACTC
ACACGGCCAAGCTTCTGCCACCACTTCATTAGCTGTATTCTCCATAGTATGGTGAAATAGCAGGTGCGTCTTCTAGTTTATTCCTCCTGG
GGACATTTCCTCAAAGCAGTTTTGCGCCCCCGCAAGGGAATGGTCAGCCTAAGGGTAATGTACAGCCCGTGCTTGGAGAACCATGGAAGC

>In-frame_ENST00000355533_ENST00000378825_TCGA-V1-A9O5_ZNF585A_chr19_37646766_-_CCDC3_chr10_13040512_length(amino acids)=150AA_start in transcript=462_stop in transcript=914
MDPSQRNLYRDVMLETYSHLLSVGYQVPEAEVVMLEQGKEPWALQGERPRQSCPGWMKIITSCLTESISKMPSSQTLKRTEGCFLAFSSF

--------------------------------------------------------------
>In-frame_ENST00000292841_ENST00000378825_TCGA-V1-A9O5-06A_ZNF585A_chr19_37646767_-_CCDC3_chr10_13040512_length(transcript)=2853nt_BP=625nt
GGACCGGAAGTGGAAGTGGTCTTCCAAGGCTTTTTTGCCGCTGGTGTCAGGAGTATTTTCATATTCCAATACCGATAAATCTTTGAGGTT
TCTGGGTGTCTCTGGGGAGCCCCTGGGCCAGATTTTCCTCTAGACTCCAGCCCATCTCTTCAGAGCAGCTCTGCTTGAGTTCACAGATGA
CTGCCAAGCTTCAGACACCCTACAGAAAAAGGGTTGAGACCCAGTGTGGCCATGCCAGCTAATTGGACCTCACCTCAGAAATCCTCAGCC
CTGGCTCCAGAGGATCATGGCAGCTCCTATGAGTGTTAACCTTGATGCCTGAAAGAACTGGAAATTATGAAGATAGATTCAGAAGTCAAA
TATGTTAACTAACTGCATTGAAGAGTAGAAGAAAACAATAGCCTAGGATCAGTGTCCTTCAGGGATGTGGCTATCGATTTCAGCAGAGAG
GAATGGCGGCACCTGGACCCTTCTCAGAGAAACCTGTACCGGGATGTGATGCTGGAGACCTACAGCCACCTGCTCTCAGTAGGATATCAA
GTTCCTGAAGCAGAGGTGGTCATGTTGGAGCAAGGAAAGGAACCATGGGCACTGCAGGGTGAGAGGCCACGTCAGAGCTGCCCAGGATGG
ATGAAAATTATAACCTCTTGCCTCACGGAGTCAATTTCCAAGATGCCATCTTCCCAGACACTCAAGAGAACAGAAGGATGTTTTCTAGCC
TTTTCCAGTTTTCAAACTGTTCGCAAGGGCAGCAGCTGGCGACTTTCTCCAGTGACTGGGAAATCCAGGAAGACAGTAGGCTCATGTGCT
CCTCGGTGCAGAAGGCCTTGTTTGAGGAGGAGGACCACGTCAAGAAACTGCAGCAGAAAGTGGCCACCCTGGAGAAGCGCAACCGGCAGC
TCCGGGAGCGAGTGAAGAAGGTCAAGAGGTCCTTGCGGCAGGCGCGTAAGAAGGGCCGCCACCTGGAGCTGGCGAACCAGAAACTCAGTG
AGAAGCTGGCGGCGGGCGCGCTGCCGCACATCAATGCCCGGGGGCCCGTGCGCCCCCCCTACCTGCGGGGGTAACGGGCCTGGGGGCTGC
CAGGTGTGCAGGGCCAATCCTGACGGTAATTGAGAATGAGTGAGGTTTCGTACATGCAGCTATTTCAAGGGTTGTAAGAGTTTTTGTTTT
TAATCACGCATTTGGTAGAGTCTAAATGGATAAAATGCAAGGCTTGCTTTCCCCTTGGGTGCTGGCCTCAATGTCAGACCCCACGCGCTG
CCCCTTCCTGGCCTGACCCCAGACGCAGTGCCTGGCAGTCCAGAGGCAGTGGGATCCCTGAGTGCTGAATGCTCGCCTGCAGAGCAGCCC
AGAAAGAGCCCTGACTGGGGAGAGAACATTTTAGAATCTCTAGTGTAAAAGACATCAACGTGCTTAGCCTTTATTTCAGAAAAAAATCAG
GGTGGTTCCCAGCTCCCCAGTCCAGGACAACCATTAGTCCTGATGAGTGAGCTGACGCTGGTGCTGGAACCTGCTGGCACCTCACTGGCC
ACATCTTTGGAAGGGGATGGTGGCCTTGCATCCAAGATGCCTGAAAATCAGCACGTGCAGGGCCTCCCTATCCAGCCAGCATTTTCCTTC
CAGCTGAGGCAGGTGAAGACTTCATAAGCTCATCACAGGGGAGGGAATTAGGAGCAGGGCAGCAGGTAATTAAACAAGATAAATTATACC
TGATTTCCAACACCAGCTACAAAGAGTTGAAGATGATACCTATGGGTCGCGTTAACACAGGGGGCAACTGCCTTGATCGGCCTGCCATGG
GTCATCAGACTGCTTCCTAAATTGAGAGAAACTGAGCAATCTCTCAGCCACTGCTATAGTCTAACTTCTTGTTTGCTGAGTAATTGTTTC
TAATGTCTCTGAACTCAAAGTGAGGTGCTCCAAGACGCTGTGAACTTCTGCAAAGACACCTCCTTACCTACTGGGATCACGTGACCTGAC
CTCACTCCCAGCCAGGCTCCCAAAGGGCTCATTCCAGCCATTCCAATCTCTTCTTCTTTATGCAAACACTTTTCCCCCACAACAAGCCTT
GTTTGTTCCGATAGGAATACGTGTACGTCAGTGCACTTGTCCTTACGTCAGTTCCTTACACCACCAAAGCACTTCACCTTTCTGGAAATA
AAACTTTTAAGACACTACTATAAGTAAAAATGAGAGTATTCACTAGACTTATTGCTCAGGCACATTTGAGTGGGTCCCAGCTGTGTGATT
AAGAAGTCAACTGGGTGGCCTTTTCTGGGTTATCTTCTGATCATGGCCTTTCAACCCAACAAGGGCCCTTCCCTGCTCTTCCACCAGTAA
AGGCTCCTGGCCTCTCATCAGGATCTGCCCCCCAGAGACCCCCCCCAGACACTGCAGGGCCTGGTGATGCTGTCCTCTGTACCGGAAATG
GCAGGCACTGTCAGATTTCCACTCTTCTGCCTTTAGGAAGGCTGGGTGCTTCTTGCTCTGACAGCCAGTCTGGGGAGATGACTCTTACGT
TGCTTGAGTCTTGGTGGCAGGCTGCTGTCCACGGGGGAGAAGTCTCTGCTCTGGACTGGACAGAAGAGAGACTTTTACCCTGGGGCACTC
ACACGGCCAAGCTTCTGCCACCACTTCATTAGCTGTATTCTCCATAGTATGGTGAAATAGCAGGTGCGTCTTCTAGTTTATTCCTCCTGG
GGACATTTCCTCAAAGCAGTTTTGCGCCCCCGCAAGGGAATGGTCAGCCTAAGGGTAATGTACAGCCCGTGCTTGGAGAACCATGGAAGC

>In-frame_ENST00000292841_ENST00000378825_TCGA-V1-A9O5-06A_ZNF585A_chr19_37646767_-_CCDC3_chr10_13040512_length(amino acids)=150AA_start in transcript=462_stop in transcript=914
MDPSQRNLYRDVMLETYSHLLSVGYQVPEAEVVMLEQGKEPWALQGERPRQSCPGWMKIITSCLTESISKMPSSQTLKRTEGCFLAFSSF

--------------------------------------------------------------
>In-frame_ENST00000355533_ENST00000378825_TCGA-V1-A9O5-06A_ZNF585A_chr19_37646767_-_CCDC3_chr10_13040512_length(transcript)=2853nt_BP=625nt
GGACCGGAAGTGGAAGTGGTCTTCCAAGGCTTTTTTGCCGCTGGTGTCAGGAGTATTTTCATATTCCAATACCGATAAATCTTTGAGGTT
TCTGGGTGTCTCTGGGGAGCCCCTGGGCCAGATTTTCCTCTAGACTCCAGCCCATCTCTTCAGAGCAGCTCTGCTTGAGTTCACAGATGA
CTGCCAAGCTTCAGACACCCTACAGAAAAAGGGTTGAGACCCAGTGTGGCCATGCCAGCTAATTGGACCTCACCTCAGAAATCCTCAGCC
CTGGCTCCAGAGGATCATGGCAGCTCCTATGAGTGTTAACCTTGATGCCTGAAAGAACTGGAAATTATGAAGATAGATTCAGAAGTCAAA
TATGTTAACTAACTGCATTGAAGAGTAGAAGAAAACAATAGCCTAGGATCAGTGTCCTTCAGGGATGTGGCTATCGATTTCAGCAGAGAG
GAATGGCGGCACCTGGACCCTTCTCAGAGAAACCTGTACCGGGATGTGATGCTGGAGACCTACAGCCACCTGCTCTCAGTAGGATATCAA
GTTCCTGAAGCAGAGGTGGTCATGTTGGAGCAAGGAAAGGAACCATGGGCACTGCAGGGTGAGAGGCCACGTCAGAGCTGCCCAGGATGG
ATGAAAATTATAACCTCTTGCCTCACGGAGTCAATTTCCAAGATGCCATCTTCCCAGACACTCAAGAGAACAGAAGGATGTTTTCTAGCC
TTTTCCAGTTTTCAAACTGTTCGCAAGGGCAGCAGCTGGCGACTTTCTCCAGTGACTGGGAAATCCAGGAAGACAGTAGGCTCATGTGCT
CCTCGGTGCAGAAGGCCTTGTTTGAGGAGGAGGACCACGTCAAGAAACTGCAGCAGAAAGTGGCCACCCTGGAGAAGCGCAACCGGCAGC
TCCGGGAGCGAGTGAAGAAGGTCAAGAGGTCCTTGCGGCAGGCGCGTAAGAAGGGCCGCCACCTGGAGCTGGCGAACCAGAAACTCAGTG
AGAAGCTGGCGGCGGGCGCGCTGCCGCACATCAATGCCCGGGGGCCCGTGCGCCCCCCCTACCTGCGGGGGTAACGGGCCTGGGGGCTGC
CAGGTGTGCAGGGCCAATCCTGACGGTAATTGAGAATGAGTGAGGTTTCGTACATGCAGCTATTTCAAGGGTTGTAAGAGTTTTTGTTTT
TAATCACGCATTTGGTAGAGTCTAAATGGATAAAATGCAAGGCTTGCTTTCCCCTTGGGTGCTGGCCTCAATGTCAGACCCCACGCGCTG
CCCCTTCCTGGCCTGACCCCAGACGCAGTGCCTGGCAGTCCAGAGGCAGTGGGATCCCTGAGTGCTGAATGCTCGCCTGCAGAGCAGCCC
AGAAAGAGCCCTGACTGGGGAGAGAACATTTTAGAATCTCTAGTGTAAAAGACATCAACGTGCTTAGCCTTTATTTCAGAAAAAAATCAG
GGTGGTTCCCAGCTCCCCAGTCCAGGACAACCATTAGTCCTGATGAGTGAGCTGACGCTGGTGCTGGAACCTGCTGGCACCTCACTGGCC
ACATCTTTGGAAGGGGATGGTGGCCTTGCATCCAAGATGCCTGAAAATCAGCACGTGCAGGGCCTCCCTATCCAGCCAGCATTTTCCTTC
CAGCTGAGGCAGGTGAAGACTTCATAAGCTCATCACAGGGGAGGGAATTAGGAGCAGGGCAGCAGGTAATTAAACAAGATAAATTATACC
TGATTTCCAACACCAGCTACAAAGAGTTGAAGATGATACCTATGGGTCGCGTTAACACAGGGGGCAACTGCCTTGATCGGCCTGCCATGG
GTCATCAGACTGCTTCCTAAATTGAGAGAAACTGAGCAATCTCTCAGCCACTGCTATAGTCTAACTTCTTGTTTGCTGAGTAATTGTTTC
TAATGTCTCTGAACTCAAAGTGAGGTGCTCCAAGACGCTGTGAACTTCTGCAAAGACACCTCCTTACCTACTGGGATCACGTGACCTGAC
CTCACTCCCAGCCAGGCTCCCAAAGGGCTCATTCCAGCCATTCCAATCTCTTCTTCTTTATGCAAACACTTTTCCCCCACAACAAGCCTT
GTTTGTTCCGATAGGAATACGTGTACGTCAGTGCACTTGTCCTTACGTCAGTTCCTTACACCACCAAAGCACTTCACCTTTCTGGAAATA
AAACTTTTAAGACACTACTATAAGTAAAAATGAGAGTATTCACTAGACTTATTGCTCAGGCACATTTGAGTGGGTCCCAGCTGTGTGATT
AAGAAGTCAACTGGGTGGCCTTTTCTGGGTTATCTTCTGATCATGGCCTTTCAACCCAACAAGGGCCCTTCCCTGCTCTTCCACCAGTAA
AGGCTCCTGGCCTCTCATCAGGATCTGCCCCCCAGAGACCCCCCCCAGACACTGCAGGGCCTGGTGATGCTGTCCTCTGTACCGGAAATG
GCAGGCACTGTCAGATTTCCACTCTTCTGCCTTTAGGAAGGCTGGGTGCTTCTTGCTCTGACAGCCAGTCTGGGGAGATGACTCTTACGT
TGCTTGAGTCTTGGTGGCAGGCTGCTGTCCACGGGGGAGAAGTCTCTGCTCTGGACTGGACAGAAGAGAGACTTTTACCCTGGGGCACTC
ACACGGCCAAGCTTCTGCCACCACTTCATTAGCTGTATTCTCCATAGTATGGTGAAATAGCAGGTGCGTCTTCTAGTTTATTCCTCCTGG
GGACATTTCCTCAAAGCAGTTTTGCGCCCCCGCAAGGGAATGGTCAGCCTAAGGGTAATGTACAGCCCGTGCTTGGAGAACCATGGAAGC

>In-frame_ENST00000355533_ENST00000378825_TCGA-V1-A9O5-06A_ZNF585A_chr19_37646767_-_CCDC3_chr10_13040512_length(amino acids)=150AA_start in transcript=462_stop in transcript=914
MDPSQRNLYRDVMLETYSHLLSVGYQVPEAEVVMLEQGKEPWALQGERPRQSCPGWMKIITSCLTESISKMPSSQTLKRTEGCFLAFSSF

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Fusion Gene PPI Analysis for ZNF585A-CCDC3


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for ZNF585A-CCDC3


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for ZNF585A-CCDC3


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource