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 | Fusion Gene Summary |
| Fusion Gene ORF analysis |
| Fusion Genomic Features |
| Fusion Protein Features |
| Fusion Gene Sequence |
| Fusion Gene PPI analysis |
| Related Drugs |
| Related Diseases |
Fusion gene:C17orf85-ATP2A3 (FusionGDB2 ID:11166) |
Fusion Gene Summary for C17orf85-ATP2A3 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: C17orf85-ATP2A3 | Fusion gene ID: 11166 | Hgene | Tgene | Gene symbol | C17orf85 | ATP2A3 | Gene ID | 55421 | 489 |
| Gene name | nuclear cap binding subunit 3 | ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 | |
| Synonyms | C17orf85|ELG|HSA277841 | SERCA3 | |
| Cytomap | 17p13.2 | 17p13.2 | |
| Type of gene | protein-coding | protein-coding | |
| Description | nuclear cap-binding protein subunit 3CTD-3195I5.1CTD-3195I5.5 | sarcoplasmic/endoplasmic reticulum calcium ATPase 3ATPase, Ca(2+)-transporting, ubiquitousATPase, Ca++ transporting, ubiquitousSR Ca(2+)-ATPase 3adenosine triphosphatase, calciumcalcium pump 3calcium-translocating P-type ATPasesarco/endoplasmic ret | |
| Modification date | 20200313 | 20200313 | |
| UniProtAcc | . | Q93084 | |
| Ensembl transtripts involved in fusion gene | ENST00000158149, ENST00000389005, ENST00000577169, | ENST00000397035, ENST00000397041, ENST00000309890, ENST00000397039, ENST00000359983, ENST00000352011, ENST00000397043, | |
| Fusion gene scores | * DoF score | 2 X 2 X 2=8 | 5 X 3 X 5=75 |
| # samples | 2 | 5 | |
| ** MAII score | log2(2/8*10)=1.32192809488736 | log2(5/75*10)=-0.584962500721156 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: C17orf85 [Title/Abstract] AND ATP2A3 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint | C17orf85(3717616)-ATP2A3(3857004), # samples:2 | ||
| Anticipated loss of major functional domain due to fusion event. | C17orf85-ATP2A3 seems lost the major protein functional domain in Tgene partner, which is a IUPHAR drug target due to the frame-shifted ORF. | ||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Tgene | ATP2A3 | GO:0006919 | activation of cysteine-type endopeptidase activity involved in apoptotic process | 16725111 |
| Tgene | ATP2A3 | GO:0070059 | intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress | 16725111 |
| Tgene | ATP2A3 | GO:0070588 | calcium ion transmembrane transport | 9843705|11956212 |
| Tgene | ATP2A3 | GO:1903515 | calcium ion transport from cytosol to endoplasmic reticulum | 15028735 |
| Fusion gene breakpoints across C17orf85 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
| Fusion gene breakpoints across ATP2A3 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
| Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB4 | SKCM | TCGA-D9-A6E9-06A | C17orf85 | chr17 | 3717616 | - | ATP2A3 | chr17 | 3857004 | - |
| ChimerDB4 | SKCM | TCGA-D9-A6E9-06A | C17orf85 | chr17 | 3717616 | - | ATP2A3 | chr17 | 3857004 | - |
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Fusion Gene ORF analysis for C17orf85-ATP2A3 |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| Frame-shift | ENST00000158149 | ENST00000397035 | C17orf85 | chr17 | 3717616 | - | ATP2A3 | chr17 | 3857004 | - |
| Frame-shift | ENST00000158149 | ENST00000397041 | C17orf85 | chr17 | 3717616 | - | ATP2A3 | chr17 | 3857004 | - |
| Frame-shift | ENST00000158149 | ENST00000309890 | C17orf85 | chr17 | 3717616 | - | ATP2A3 | chr17 | 3857004 | - |
| 5CDS-5UTR | ENST00000158149 | ENST00000397039 | C17orf85 | chr17 | 3717616 | - | ATP2A3 | chr17 | 3857004 | - |
| 5CDS-5UTR | ENST00000158149 | ENST00000359983 | C17orf85 | chr17 | 3717616 | - | ATP2A3 | chr17 | 3857004 | - |
| 5CDS-5UTR | ENST00000158149 | ENST00000352011 | C17orf85 | chr17 | 3717616 | - | ATP2A3 | chr17 | 3857004 | - |
| 5CDS-5UTR | ENST00000158149 | ENST00000397043 | C17orf85 | chr17 | 3717616 | - | ATP2A3 | chr17 | 3857004 | - |
| Frame-shift | ENST00000389005 | ENST00000397035 | C17orf85 | chr17 | 3717616 | - | ATP2A3 | chr17 | 3857004 | - |
| In-frame | ENST00000389005 | ENST00000397041 | C17orf85 | chr17 | 3717616 | - | ATP2A3 | chr17 | 3857004 | - |
| In-frame | ENST00000389005 | ENST00000309890 | C17orf85 | chr17 | 3717616 | - | ATP2A3 | chr17 | 3857004 | - |
| 5CDS-5UTR | ENST00000389005 | ENST00000397039 | C17orf85 | chr17 | 3717616 | - | ATP2A3 | chr17 | 3857004 | - |
| 5CDS-5UTR | ENST00000389005 | ENST00000359983 | C17orf85 | chr17 | 3717616 | - | ATP2A3 | chr17 | 3857004 | - |
| 5CDS-5UTR | ENST00000389005 | ENST00000352011 | C17orf85 | chr17 | 3717616 | - | ATP2A3 | chr17 | 3857004 | - |
| 5CDS-5UTR | ENST00000389005 | ENST00000397043 | C17orf85 | chr17 | 3717616 | - | ATP2A3 | chr17 | 3857004 | - |
| intron-3CDS | ENST00000577169 | ENST00000397035 | C17orf85 | chr17 | 3717616 | - | ATP2A3 | chr17 | 3857004 | - |
| intron-3CDS | ENST00000577169 | ENST00000397041 | C17orf85 | chr17 | 3717616 | - | ATP2A3 | chr17 | 3857004 | - |
| intron-3CDS | ENST00000577169 | ENST00000309890 | C17orf85 | chr17 | 3717616 | - | ATP2A3 | chr17 | 3857004 | - |
| intron-5UTR | ENST00000577169 | ENST00000397039 | C17orf85 | chr17 | 3717616 | - | ATP2A3 | chr17 | 3857004 | - |
| intron-5UTR | ENST00000577169 | ENST00000359983 | C17orf85 | chr17 | 3717616 | - | ATP2A3 | chr17 | 3857004 | - |
| intron-5UTR | ENST00000577169 | ENST00000352011 | C17orf85 | chr17 | 3717616 | - | ATP2A3 | chr17 | 3857004 | - |
| intron-5UTR | ENST00000577169 | ENST00000397043 | C17orf85 | chr17 | 3717616 | - | ATP2A3 | chr17 | 3857004 | - |
| ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
| ENST00000389005 | C17orf85 | chr17 | 3717616 | - | ENST00000397041 | ATP2A3 | chr17 | 3857004 | - | 6084 | 1655 | 28 | 4536 | 1502 |
| ENST00000389005 | C17orf85 | chr17 | 3717616 | - | ENST00000309890 | ATP2A3 | chr17 | 3857004 | - | 6185 | 1655 | 28 | 4626 | 1532 |
| DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
| ENST00000389005 | ENST00000397041 | C17orf85 | chr17 | 3717616 | - | ATP2A3 | chr17 | 3857004 | - | 0.003221165 | 0.9967789 |
| ENST00000389005 | ENST00000309890 | C17orf85 | chr17 | 3717616 | - | ATP2A3 | chr17 | 3857004 | - | 0.002032297 | 0.99796766 |
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Fusion Genomic Features for C17orf85-ATP2A3 |
| FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
| Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for C17orf85-ATP2A3 |
| Go to FGviewer for the breakpoints of chr17:3717616-chr17:3857004 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
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| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| . | ATP2A3 |
| FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. Transports calcium ions from the cytosol into the sarcoplasmic/endoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction. {ECO:0000269|PubMed:11956212, ECO:0000269|PubMed:15028735}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | C17orf85 | chr17:3717616 | chr17:3857004 | ENST00000389005 | - | 12 | 13 | 340_376 | 542.3333333333334 | 621.0 | Compositional bias | Note=Glu-rich |
| Hgene | C17orf85 | chr17:3717616 | chr17:3857004 | ENST00000158149 | - | 13 | 14 | 126_187 | 262.3333333333333 | 341.0 | Region | RNA recognition motif (RRM) domain |
| Hgene | C17orf85 | chr17:3717616 | chr17:3857004 | ENST00000389005 | - | 12 | 13 | 126_187 | 542.3333333333334 | 621.0 | Region | RNA recognition motif (RRM) domain |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000309890 | 0 | 22 | 111_253 | 39.333333333333336 | 1030.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000309890 | 0 | 22 | 274_295 | 39.333333333333336 | 1030.0 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000309890 | 0 | 22 | 314_757 | 39.333333333333336 | 1030.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000309890 | 0 | 22 | 70_89 | 39.333333333333336 | 1030.0 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000309890 | 0 | 22 | 778_787 | 39.333333333333336 | 1030.0 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000309890 | 0 | 22 | 809_828 | 39.333333333333336 | 1030.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000309890 | 0 | 22 | 852_897 | 39.333333333333336 | 1030.0 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000309890 | 0 | 22 | 918_930 | 39.333333333333336 | 1030.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000309890 | 0 | 22 | 950_964 | 39.333333333333336 | 1030.0 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000309890 | 0 | 22 | 986_999 | 39.333333333333336 | 1030.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000352011 | 0 | 22 | 111_253 | 39.333333333333336 | 1044.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000352011 | 0 | 22 | 274_295 | 39.333333333333336 | 1044.0 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000352011 | 0 | 22 | 314_757 | 39.333333333333336 | 1044.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000352011 | 0 | 22 | 70_89 | 39.333333333333336 | 1044.0 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000352011 | 0 | 22 | 778_787 | 39.333333333333336 | 1044.0 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000352011 | 0 | 22 | 809_828 | 39.333333333333336 | 1044.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000352011 | 0 | 22 | 852_897 | 39.333333333333336 | 1044.0 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000352011 | 0 | 22 | 918_930 | 39.333333333333336 | 1044.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000352011 | 0 | 22 | 950_964 | 39.333333333333336 | 1044.0 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000352011 | 0 | 22 | 986_999 | 39.333333333333336 | 1044.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000359983 | 0 | 23 | 111_253 | 39.333333333333336 | 1053.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000359983 | 0 | 23 | 274_295 | 39.333333333333336 | 1053.0 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000359983 | 0 | 23 | 314_757 | 39.333333333333336 | 1053.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000359983 | 0 | 23 | 70_89 | 39.333333333333336 | 1053.0 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000359983 | 0 | 23 | 778_787 | 39.333333333333336 | 1053.0 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000359983 | 0 | 23 | 809_828 | 39.333333333333336 | 1053.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000359983 | 0 | 23 | 852_897 | 39.333333333333336 | 1053.0 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000359983 | 0 | 23 | 918_930 | 39.333333333333336 | 1053.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000359983 | 0 | 23 | 950_964 | 39.333333333333336 | 1053.0 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000359983 | 0 | 23 | 986_999 | 39.333333333333336 | 1053.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397035 | 0 | 23 | 111_253 | 39.333333333333336 | 1266.3333333333333 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397035 | 0 | 23 | 274_295 | 39.333333333333336 | 1266.3333333333333 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397035 | 0 | 23 | 314_757 | 39.333333333333336 | 1266.3333333333333 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397035 | 0 | 23 | 70_89 | 39.333333333333336 | 1266.3333333333333 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397035 | 0 | 23 | 778_787 | 39.333333333333336 | 1266.3333333333333 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397035 | 0 | 23 | 809_828 | 39.333333333333336 | 1266.3333333333333 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397035 | 0 | 23 | 852_897 | 39.333333333333336 | 1266.3333333333333 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397035 | 0 | 23 | 918_930 | 39.333333333333336 | 1266.3333333333333 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397035 | 0 | 23 | 950_964 | 39.333333333333336 | 1266.3333333333333 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397035 | 0 | 23 | 986_999 | 39.333333333333336 | 1266.3333333333333 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397041 | 0 | 21 | 111_253 | 39.333333333333336 | 1000.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397041 | 0 | 21 | 274_295 | 39.333333333333336 | 1000.0 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397041 | 0 | 21 | 314_757 | 39.333333333333336 | 1000.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397041 | 0 | 21 | 70_89 | 39.333333333333336 | 1000.0 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397041 | 0 | 21 | 778_787 | 39.333333333333336 | 1000.0 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397041 | 0 | 21 | 809_828 | 39.333333333333336 | 1000.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397041 | 0 | 21 | 852_897 | 39.333333333333336 | 1000.0 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397041 | 0 | 21 | 918_930 | 39.333333333333336 | 1000.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397041 | 0 | 21 | 950_964 | 39.333333333333336 | 1000.0 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397041 | 0 | 21 | 986_999 | 39.333333333333336 | 1000.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397043 | 0 | 21 | 111_253 | 39.333333333333336 | 999.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397043 | 0 | 21 | 274_295 | 39.333333333333336 | 999.0 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397043 | 0 | 21 | 314_757 | 39.333333333333336 | 999.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397043 | 0 | 21 | 70_89 | 39.333333333333336 | 999.0 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397043 | 0 | 21 | 778_787 | 39.333333333333336 | 999.0 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397043 | 0 | 21 | 809_828 | 39.333333333333336 | 999.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397043 | 0 | 21 | 852_897 | 39.333333333333336 | 999.0 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397043 | 0 | 21 | 918_930 | 39.333333333333336 | 999.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397043 | 0 | 21 | 950_964 | 39.333333333333336 | 999.0 | Topological domain | Lumenal | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397043 | 0 | 21 | 986_999 | 39.333333333333336 | 999.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000309890 | 0 | 22 | 254_273 | 39.333333333333336 | 1030.0 | Transmembrane | Helical%3B Name%3D3 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000309890 | 0 | 22 | 296_313 | 39.333333333333336 | 1030.0 | Transmembrane | Helical%3B Name%3D4 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000309890 | 0 | 22 | 49_69 | 39.333333333333336 | 1030.0 | Transmembrane | Helical%3B Name%3D1 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000309890 | 0 | 22 | 758_777 | 39.333333333333336 | 1030.0 | Transmembrane | Helical%3B Name%3D5 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000309890 | 0 | 22 | 829_851 | 39.333333333333336 | 1030.0 | Transmembrane | Helical%3B Name%3D7 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000309890 | 0 | 22 | 898_917 | 39.333333333333336 | 1030.0 | Transmembrane | Helical%3B Name%3D8 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000309890 | 0 | 22 | 90_110 | 39.333333333333336 | 1030.0 | Transmembrane | Helical%3B Name%3D2 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000309890 | 0 | 22 | 931_949 | 39.333333333333336 | 1030.0 | Transmembrane | Helical%3B Name%3D9 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000309890 | 0 | 22 | 965_985 | 39.333333333333336 | 1030.0 | Transmembrane | Helical%3B Name%3D10 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000352011 | 0 | 22 | 254_273 | 39.333333333333336 | 1044.0 | Transmembrane | Helical%3B Name%3D3 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000352011 | 0 | 22 | 296_313 | 39.333333333333336 | 1044.0 | Transmembrane | Helical%3B Name%3D4 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000352011 | 0 | 22 | 49_69 | 39.333333333333336 | 1044.0 | Transmembrane | Helical%3B Name%3D1 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000352011 | 0 | 22 | 758_777 | 39.333333333333336 | 1044.0 | Transmembrane | Helical%3B Name%3D5 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000352011 | 0 | 22 | 829_851 | 39.333333333333336 | 1044.0 | Transmembrane | Helical%3B Name%3D7 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000352011 | 0 | 22 | 898_917 | 39.333333333333336 | 1044.0 | Transmembrane | Helical%3B Name%3D8 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000352011 | 0 | 22 | 90_110 | 39.333333333333336 | 1044.0 | Transmembrane | Helical%3B Name%3D2 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000352011 | 0 | 22 | 931_949 | 39.333333333333336 | 1044.0 | Transmembrane | Helical%3B Name%3D9 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000352011 | 0 | 22 | 965_985 | 39.333333333333336 | 1044.0 | Transmembrane | Helical%3B Name%3D10 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000359983 | 0 | 23 | 254_273 | 39.333333333333336 | 1053.0 | Transmembrane | Helical%3B Name%3D3 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000359983 | 0 | 23 | 296_313 | 39.333333333333336 | 1053.0 | Transmembrane | Helical%3B Name%3D4 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000359983 | 0 | 23 | 49_69 | 39.333333333333336 | 1053.0 | Transmembrane | Helical%3B Name%3D1 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000359983 | 0 | 23 | 758_777 | 39.333333333333336 | 1053.0 | Transmembrane | Helical%3B Name%3D5 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000359983 | 0 | 23 | 829_851 | 39.333333333333336 | 1053.0 | Transmembrane | Helical%3B Name%3D7 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000359983 | 0 | 23 | 898_917 | 39.333333333333336 | 1053.0 | Transmembrane | Helical%3B Name%3D8 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000359983 | 0 | 23 | 90_110 | 39.333333333333336 | 1053.0 | Transmembrane | Helical%3B Name%3D2 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000359983 | 0 | 23 | 931_949 | 39.333333333333336 | 1053.0 | Transmembrane | Helical%3B Name%3D9 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000359983 | 0 | 23 | 965_985 | 39.333333333333336 | 1053.0 | Transmembrane | Helical%3B Name%3D10 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397035 | 0 | 23 | 254_273 | 39.333333333333336 | 1266.3333333333333 | Transmembrane | Helical%3B Name%3D3 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397035 | 0 | 23 | 296_313 | 39.333333333333336 | 1266.3333333333333 | Transmembrane | Helical%3B Name%3D4 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397035 | 0 | 23 | 49_69 | 39.333333333333336 | 1266.3333333333333 | Transmembrane | Helical%3B Name%3D1 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397035 | 0 | 23 | 758_777 | 39.333333333333336 | 1266.3333333333333 | Transmembrane | Helical%3B Name%3D5 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397035 | 0 | 23 | 829_851 | 39.333333333333336 | 1266.3333333333333 | Transmembrane | Helical%3B Name%3D7 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397035 | 0 | 23 | 898_917 | 39.333333333333336 | 1266.3333333333333 | Transmembrane | Helical%3B Name%3D8 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397035 | 0 | 23 | 90_110 | 39.333333333333336 | 1266.3333333333333 | Transmembrane | Helical%3B Name%3D2 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397035 | 0 | 23 | 931_949 | 39.333333333333336 | 1266.3333333333333 | Transmembrane | Helical%3B Name%3D9 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397035 | 0 | 23 | 965_985 | 39.333333333333336 | 1266.3333333333333 | Transmembrane | Helical%3B Name%3D10 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397041 | 0 | 21 | 254_273 | 39.333333333333336 | 1000.0 | Transmembrane | Helical%3B Name%3D3 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397041 | 0 | 21 | 296_313 | 39.333333333333336 | 1000.0 | Transmembrane | Helical%3B Name%3D4 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397041 | 0 | 21 | 49_69 | 39.333333333333336 | 1000.0 | Transmembrane | Helical%3B Name%3D1 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397041 | 0 | 21 | 758_777 | 39.333333333333336 | 1000.0 | Transmembrane | Helical%3B Name%3D5 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397041 | 0 | 21 | 829_851 | 39.333333333333336 | 1000.0 | Transmembrane | Helical%3B Name%3D7 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397041 | 0 | 21 | 898_917 | 39.333333333333336 | 1000.0 | Transmembrane | Helical%3B Name%3D8 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397041 | 0 | 21 | 90_110 | 39.333333333333336 | 1000.0 | Transmembrane | Helical%3B Name%3D2 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397041 | 0 | 21 | 931_949 | 39.333333333333336 | 1000.0 | Transmembrane | Helical%3B Name%3D9 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397041 | 0 | 21 | 965_985 | 39.333333333333336 | 1000.0 | Transmembrane | Helical%3B Name%3D10 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397043 | 0 | 21 | 254_273 | 39.333333333333336 | 999.0 | Transmembrane | Helical%3B Name%3D3 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397043 | 0 | 21 | 296_313 | 39.333333333333336 | 999.0 | Transmembrane | Helical%3B Name%3D4 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397043 | 0 | 21 | 49_69 | 39.333333333333336 | 999.0 | Transmembrane | Helical%3B Name%3D1 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397043 | 0 | 21 | 758_777 | 39.333333333333336 | 999.0 | Transmembrane | Helical%3B Name%3D5 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397043 | 0 | 21 | 829_851 | 39.333333333333336 | 999.0 | Transmembrane | Helical%3B Name%3D7 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397043 | 0 | 21 | 898_917 | 39.333333333333336 | 999.0 | Transmembrane | Helical%3B Name%3D8 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397043 | 0 | 21 | 90_110 | 39.333333333333336 | 999.0 | Transmembrane | Helical%3B Name%3D2 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397043 | 0 | 21 | 931_949 | 39.333333333333336 | 999.0 | Transmembrane | Helical%3B Name%3D9 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397043 | 0 | 21 | 965_985 | 39.333333333333336 | 999.0 | Transmembrane | Helical%3B Name%3D10 |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | C17orf85 | chr17:3717616 | chr17:3857004 | ENST00000158149 | - | 13 | 14 | 340_376 | 262.3333333333333 | 341.0 | Compositional bias | Note=Glu-rich |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000309890 | 0 | 22 | 1_48 | 39.333333333333336 | 1030.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000352011 | 0 | 22 | 1_48 | 39.333333333333336 | 1044.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000359983 | 0 | 23 | 1_48 | 39.333333333333336 | 1053.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397035 | 0 | 23 | 1_48 | 39.333333333333336 | 1266.3333333333333 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397041 | 0 | 21 | 1_48 | 39.333333333333336 | 1000.0 | Topological domain | Cytoplasmic | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397043 | 0 | 21 | 1_48 | 39.333333333333336 | 999.0 | Topological domain | Cytoplasmic |
Top |
Fusion Gene Sequence for C17orf85-ATP2A3 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
| >In-frame_ENST00000389005_ENST00000397041_TCGA-D9-A6E9-06A_C17orf85_chr17_3717616_-_ATP2A3_chr17_3857004_length(transcript)=6084nt_BP=1655nt CTCTCAGTGGTGCGGCCGGCAGGCAGCGATGGCGGCCGTACGGGGCCTGCGGGTGTCGGTGAAGGCGGAGGCCCCGGCGGGGCCGGCCCT GGGGCTCCCGTCCCCTGAGGCGGAGTCCGGTGTTGACCGTGGCGAGCCGGAGCCCATGGAGGTGGAGGAGGGCGAGCTGGAAATCGTGCC TGTGCGGCGCTCGCTCAAGGAACTGATCCCGGACACGAGCAGAAGATATGAAAACAAGGCTGGCAGCTTCATCACTGGAATTGATGTCAC CTCCAAGGAAGCAATTGAAAAGAAAGAGCAGCGAGCCAAGCGCTTCCATTTTCGATCGGAAGTAAATCTTGCCCAAAGAAATGTAGCCTT GGACCGAGACATGATGAAGAAAGCAATCCCCAAGGTGAGACTGGAGACAATCTATATTTGCGGAGTAGATGAGATGAGCACCCAAGATGT CTTTTCCTATTTTAAAGAATATCCTCCAGCTCACATCGAATGGTTGGATGATACCTCCTGTAATGTAGTTTGGCTGGATGAAATGACAGC CACACGAGCACTTATCAATATGAGCTCCCTGCCTGCACAGGATAAGATCAGAAGCAGGGATGCCAGTGAGGACAAGTCAGCTGAGAAAAG GAAAAAAGACAAGCAGGAAGACAGTTCAGATGATGATGAAGCTGAAGAAGGAGAGGTTGAAGATGAGAACTCAAGTGATGTAGAGTTGGA TACGTTGTCTCAGGTAGAAGAGGAGTCTTTGTTAAGAAACGATCTTCGTCCAGCTAACAAACTTGCTAAAGGAAATAGGTTATTCATGAG ATTTGCTACAAAAGATGACAAAAAGGAACTTGGAGCAGCCAGAAGAAGTCAGTATTACATGAAATATGGGAATCCAAATTATGGAGGCAT GAAAGGAATTCTTAGCAATTCATGGAAGCGAAGATATCATTCCCGTCGTATTCAGCGGGACGTGATCAAGAAGAGAGCCCTGATTGGGGA TGACGTTGGCTTGACGTCGTATAAACATCGACATTCTGGGCTAGTGAATGTTCCCGAGGAACCCATTGAAGAGGAGGAAGAGGAGGAGGA GGAGGAAGAGGAAGAGGAAGAAGAAGACCAGGACATGGATGCAGATGACAGAGTGGTGGTAGAGTACCACGAGGAGCTCCCGGCTCTCAA GCAGCCCCGGGAGCGGAGCGCGTCTAGACGATCCAGTGCCAGCAGCTCAGACTCAGATGAAATGGACTATGATCTAGAACTGAAAATGAT TTCCACGCCTTCACCAAAGAAAAGCATGAAAATGACTATGTATGCTGACGAAGTGGAATCTCAGTTGAAAAATATTAGGAACTCCATGAG GGCAGATAGTGTATCTTCAAGCAATATCAAAAACCGAATTGGTAACAAATTACCACCTGAGAAATTTGCAGATGTCCGACATCTATTAGA TGAGAAACGTCAGCACTCCCGTCCACGGCCACCAGTCAGCAGTACTAAATCAGATATACGCCAGCGGTTAGGAAAAAGACCACATTCTCC GGAAAAGGCTTTTAGTAGTAACCCCGTCGTTCGGAGAGAGCCCTCTTCTGATGTGCATAGTAGGCTAGGTGTTCCCAGGCAGGATAGTAA AGGCCTCTACGCCGATACTCGGGAGAAGAAATCAGAGCTCCCGAGTGAGGAAGGGAAGTCCCTGTGGGAGCTGGTGCTGGAACAGTTTGA GGACCTCCTGGTGCGCATCCTGCTGCTGGCTGCCCTTGTCTCCTTTGTCCTGGCCTGGTTCGAGGAGGGCGAGGAGACCACGACCGCCTT CGTGGAGCCCCTGGTCATCATGCTGATCCTCGTGGCCAACGCCATTGTGGGCGTGTGGCAGGAACGCAACGCCGAGAGTGCCATCGAGGC CCTGAAGGAGTATGAGCCTGAGATGGGCAAGGTGATCCGCTCGGACCGCAAGGGCGTGCAGAGGATCCGTGCCCGGGACATCGTCCCAGG GGACATTGTAGAAGTGGCAGTGGGGGACAAAGTGCCTGCTGACCTCCGCCTCATCGAGATCAAGTCCACCACGCTGCGAGTGGACCAGTC CATCCTGACGGGTGAATCTGTGTCCGTGACCAAGCACACAGAGGCCATCCCAGACCCCAGAGCTGTGAACCAGGACAAGAAGAACATGCT GTTTTCTGGCACCAATATCACATCGGGCAAAGCGGTGGGTGTGGCCGTGGCCACCGGCCTGCACACGGAGCTGGGCAAGATCCGGAGCCA GATGGCGGCAGTCGAGCCCGAGCGGACGCCGCTGCAGCGCAAGCTGGACGAGTTTGGACGGCAGCTGTCCCACGCCATCTCTGTGATCTG CGTGGCCGTGTGGGTCATCAACATCGGCCACTTCGCCGACCCGGCCCACGGTGGCTCCTGGCTGCGTGGCGCTGTCTACTACTTCAAGAT CGCCGTGGCCCTGGCGGTGGCGGCCATCCCCGAGGGCCTCCCGGCTGTCATCACTACATGCCTGGCACTGGGCACGCGGCGCATGGCACG CAAGAACGCCATCGTGCGAAGCCTGCCGTCCGTGGAGACCCTGGGCTGCACCTCAGTCATCTGCTCCGACAAGACGGGCACGCTCACCAC CAATCAGATGTCTGTCTGCCGGATGTTCGTGGTAGCCGAGGCCGATGCGGGCTCCTGCCTTTTGCACGAGTTCACCATCTCGGGTACCAC GTATACCCCCGAGGGCGAAGTGCGGCAGGGGGATCAGCCTGTGCGCTGCGGCCAGTTCGACGGGCTGGTGGAGCTGGCGACCATCTGCGC CCTGTGCAACGACTCGGCTCTGGACTACAACGAGGCCAAGGGTGTGTATGAGAAGGTGGGAGAGGCCACGGAGACAGCTCTGACTTGCCT GGTGGAGAAGATGAACGTGTTCGACACCGACCTGCAGGCTCTGTCCCGGGTGGAGCGAGCTGGCGCCTGTAACACGGTCATCAAGCAGCT GATGCGGAAGGAGTTCACCCTGGAGTTCTCCCGAGACCGGAAATCCATGTCCGTGTACTGCACGCCCACCCGCCCTCACCCTACTGGCCA GGGCAGCAAGATGTTTGTGAAGGGGGCTCCTGAGAGTGTGATCGAGCGCTGTAGCTCAGTCCGCGTGGGGAGCCGCACAGCACCCCTGAC CCCCACCTCCAGGGAGCAGATCCTGGCAAAGATCCGGGATTGGGGCTCAGGCTCAGACACGCTGCGCTGCCTGGCACTGGCCACCCGGGA CGCGCCCCCAAGGAAGGAGGACATGGAGCTGGACGACTGCAGCAAGTTTGTGCAGTACGAGACGGACCTGACCTTCGTGGGCTGCGTAGG CATGCTGGACCCGCCGCGACCTGAGGTGGCTGCCTGCATCACACGCTGCTACCAGGCGGGCATCCGCGTGGTCATGATCACGGGGGATAA CAAAGGCACTGCCGTGGCCATCTGCCGCAGGCTTGGCATCTTTGGGGACACGGAAGACGTGGCGGGCAAGGCCTACACGGGCCGCGAGTT TGATGACCTCAGCCCCGAGCAGCAGCGCCAGGCCTGCCGCACCGCCCGCTGCTTCGCCCGCGTGGAGCCCGCACACAAGTCCCGCATCGT GGAGAACCTGCAGTCCTTTAACGAGATCACTGCTATGACTGGCGATGGAGTGAACGACGCACCAGCCCTGAAGAAAGCAGAGATCGGCAT CGCCATGGGCTCAGGCACGGCCGTGGCCAAGTCGGCGGCAGAGATGGTGCTGTCAGATGACAACTTTGCCTCCATCGTGGCTGCGGTGGA GGAGGGCCGGGCCATCTACAGCAACATGAAGCAATTCATCCGCTACCTCATCTCCTCCAATGTTGGCGAGGTCGTCTGCATCTTCCTCAC GGCAATTCTGGGCCTGCCCGAAGCCCTGATCCCTGTGCAGCTGCTCTGGGTGAACCTGGTGACAGACGGCCTACCTGCCACGGCTCTGGG CTTCAACCCGCCAGACCTGGACATCATGGAGAAGCTGCCCCGGAGCCCCCGAGAAGCCCTCATCAGTGGCTGGCTCTTCTTCCGATACCT GGCTATCGGAGTGTACGTAGGCCTGGCCACAGTGGCTGCCGCCACCTGGTGGTTTGTGTATGACGCCGAGGGACCTCACATCAACTTCTA CCAGCTGAGGAACTTCCTGAAGTGCTCCGAAGACAACCCGCTCTTTGCCGGCATCGACTGTGAGGTGTTCGAGTCACGCTTCCCCACCAC CATGGCCTTGTCCGTGCTCGTGACCATTGAAATGTGCAATGCCCTCAACAGCGTCTCGGAGAACCAGTCGCTGCTGCGGATGCCGCCCTG GATGAACCCCTGGCTGCTGGTGGCTGTGGCCATGTCCATGGCCCTGCACTTCCTCATCCTGCTCGTGCCGCCCCTGCCTCTCATTTTCCA GGTGACCCCACTGAGCGGGCGCCAGTGGGTGGTGGTGCTCCAGATATCTCTGCCTGTCATCCTGCTGGATGAGGCCCTCAAGTACCTGTC CCGGAACCACATGCACGAAGAAATGAGCCAGAAGTGAGCGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACTGATGGTGCCCA TGTGTTCGCCTCCGCCCCCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGCCCGAGGTCAGAA TGGCCATCCCCGGGCCCCGTCCTGGGGTCTCTGTCCCCACTTCCTTCTGGCCTGGGAGGTCTGTAATTCCTGTCTCCTGGACTCTCCTGG GAAGTTCCCTGCTCTGCAGCTCTGGCCCAGGAGCTGCAGGCTGGGAGGGGGCAGCCAAGAAGCCGGAGCTGGCAGCATACCCAGAGATCC GGGGCCCCCCCACCCCCAAATCACGAGTGCAGCTGGAGCTTGCTCCCCCTTGTTCGGAAGCTGGACGTTCACTTGGTGACTGGTGCCTCT GCACTGACGGAGGACTCTGGGGGTCCTTCTTACCGGCTCTGACCTCTCTCTTCGTGCCTGGTCTGGGACTGGGTCAGCCCTGGGGGATCA GAAGGGGCCATCTGGGCCCAGCTGTGTACAGCGAGGGTGGGCAGCCCCCTCCACTCCACTCTGCTTCCACAAAGTCGGCTCCCGAGAGCT CGAGGCTGCTTCTGTTTATATGTGCAGGGCCCGGGCGGGTGAAGGGTCAGAGAGACGGACACAAGGAGCCGGCAGGAGGGCGGAGCGAGG ATGTCCTTTCCCGGGAGACAAGTCGGGAAAGCCTGGCTGGACTGCCTCAGCCCCGCGCGCCTCCTGGACTCAGGGTTCCCCGTCCTGAGC TCGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTACCTGAGACCACCGAC ATCCTCAGGTTCCTGACCGTGGCGCCCTTCTACCCAGCCCAGTGTGCGGCCGCCGCGCTGTCTGCACAGCTGGGGGCCTCTGAGCCTGGT GGGCTTCCTGGACTCTTGGCCTCACTCCTTGCCCCCTCCCCACGACACCCATGAGCCGAAAGGATGTCACTAAGGATGGCTGATTCCCCA AGGGCACCCGCTCTCCCTCCCTCCCTGCTGGAGGAACACGTCATATCAGATGAGAGGAAGATGGCCTCTGATGGACAGAATTTTTCTCTT AACTCAGCTTTTGCTACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCCTATGTCTTGGCCACTCCTAGAG CGTGTGCAGACTGATGATTTTATATGTAAATCAAGACTCACATCCCTTTCCTAGTCCCCCACATCCAAAGCCCCTCAGCCTGCCTTGCAG ACCAATGGGCTCCATGTTCTGTAGCCCCCTCCCCTACGCCTCACCCCTCCTCCCTCTCACAGGTTCTGGGCGGCCAGTGAGAGAAACGCA GTGGGGGAGGCAGGGAGTCTGGTGCCTGCAGAGATTCTCTGCTTCTTTCCTGGGGGGAGGTGGGGAGGTCTTAGCAGGAGCGGGCCCTGT >In-frame_ENST00000389005_ENST00000397041_TCGA-D9-A6E9-06A_C17orf85_chr17_3717616_-_ATP2A3_chr17_3857004_length(amino acids)=1502AA_start in transcript=28_stop in transcript=4536 MAAVRGLRVSVKAEAPAGPALGLPSPEAESGVDRGEPEPMEVEEGELEIVPVRRSLKELIPDTSRRYENKAGSFITGIDVTSKEAIEKKE QRAKRFHFRSEVNLAQRNVALDRDMMKKAIPKVRLETIYICGVDEMSTQDVFSYFKEYPPAHIEWLDDTSCNVVWLDEMTATRALINMSS LPAQDKIRSRDASEDKSAEKRKKDKQEDSSDDDEAEEGEVEDENSSDVELDTLSQVEEESLLRNDLRPANKLAKGNRLFMRFATKDDKKE LGAARRSQYYMKYGNPNYGGMKGILSNSWKRRYHSRRIQRDVIKKRALIGDDVGLTSYKHRHSGLVNVPEEPIEEEEEEEEEEEEEEEED QDMDADDRVVVEYHEELPALKQPRERSASRRSSASSSDSDEMDYDLELKMISTPSPKKSMKMTMYADEVESQLKNIRNSMRADSVSSSNI KNRIGNKLPPEKFADVRHLLDEKRQHSRPRPPVSSTKSDIRQRLGKRPHSPEKAFSSNPVVRREPSSDVHSRLGVPRQDSKGLYADTREK KSELPSEEGKSLWELVLEQFEDLLVRILLLAALVSFVLAWFEEGEETTTAFVEPLVIMLILVANAIVGVWQERNAESAIEALKEYEPEMG KVIRSDRKGVQRIRARDIVPGDIVEVAVGDKVPADLRLIEIKSTTLRVDQSILTGESVSVTKHTEAIPDPRAVNQDKKNMLFSGTNITSG KAVGVAVATGLHTELGKIRSQMAAVEPERTPLQRKLDEFGRQLSHAISVICVAVWVINIGHFADPAHGGSWLRGAVYYFKIAVALAVAAI PEGLPAVITTCLALGTRRMARKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCRMFVVAEADAGSCLLHEFTISGTTYTPEGEVRQ GDQPVRCGQFDGLVELATICALCNDSALDYNEAKGVYEKVGEATETALTCLVEKMNVFDTDLQALSRVERAGACNTVIKQLMRKEFTLEF SRDRKSMSVYCTPTRPHPTGQGSKMFVKGAPESVIERCSSVRVGSRTAPLTPTSREQILAKIRDWGSGSDTLRCLALATRDAPPRKEDME LDDCSKFVQYETDLTFVGCVGMLDPPRPEVAACITRCYQAGIRVVMITGDNKGTAVAICRRLGIFGDTEDVAGKAYTGREFDDLSPEQQR QACRTARCFARVEPAHKSRIVENLQSFNEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKSAAEMVLSDDNFASIVAAVEEGRAIYSNM KQFIRYLISSNVGEVVCIFLTAILGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMEKLPRSPREALISGWLFFRYLAIGVYVGLA TVAAATWWFVYDAEGPHINFYQLRNFLKCSEDNPLFAGIDCEVFESRFPTTMALSVLVTIEMCNALNSVSENQSLLRMPPWMNPWLLVAV -------------------------------------------------------------- >In-frame_ENST00000389005_ENST00000309890_TCGA-D9-A6E9-06A_C17orf85_chr17_3717616_-_ATP2A3_chr17_3857004_length(transcript)=6185nt_BP=1655nt CTCTCAGTGGTGCGGCCGGCAGGCAGCGATGGCGGCCGTACGGGGCCTGCGGGTGTCGGTGAAGGCGGAGGCCCCGGCGGGGCCGGCCCT GGGGCTCCCGTCCCCTGAGGCGGAGTCCGGTGTTGACCGTGGCGAGCCGGAGCCCATGGAGGTGGAGGAGGGCGAGCTGGAAATCGTGCC TGTGCGGCGCTCGCTCAAGGAACTGATCCCGGACACGAGCAGAAGATATGAAAACAAGGCTGGCAGCTTCATCACTGGAATTGATGTCAC CTCCAAGGAAGCAATTGAAAAGAAAGAGCAGCGAGCCAAGCGCTTCCATTTTCGATCGGAAGTAAATCTTGCCCAAAGAAATGTAGCCTT GGACCGAGACATGATGAAGAAAGCAATCCCCAAGGTGAGACTGGAGACAATCTATATTTGCGGAGTAGATGAGATGAGCACCCAAGATGT CTTTTCCTATTTTAAAGAATATCCTCCAGCTCACATCGAATGGTTGGATGATACCTCCTGTAATGTAGTTTGGCTGGATGAAATGACAGC CACACGAGCACTTATCAATATGAGCTCCCTGCCTGCACAGGATAAGATCAGAAGCAGGGATGCCAGTGAGGACAAGTCAGCTGAGAAAAG GAAAAAAGACAAGCAGGAAGACAGTTCAGATGATGATGAAGCTGAAGAAGGAGAGGTTGAAGATGAGAACTCAAGTGATGTAGAGTTGGA TACGTTGTCTCAGGTAGAAGAGGAGTCTTTGTTAAGAAACGATCTTCGTCCAGCTAACAAACTTGCTAAAGGAAATAGGTTATTCATGAG ATTTGCTACAAAAGATGACAAAAAGGAACTTGGAGCAGCCAGAAGAAGTCAGTATTACATGAAATATGGGAATCCAAATTATGGAGGCAT GAAAGGAATTCTTAGCAATTCATGGAAGCGAAGATATCATTCCCGTCGTATTCAGCGGGACGTGATCAAGAAGAGAGCCCTGATTGGGGA TGACGTTGGCTTGACGTCGTATAAACATCGACATTCTGGGCTAGTGAATGTTCCCGAGGAACCCATTGAAGAGGAGGAAGAGGAGGAGGA GGAGGAAGAGGAAGAGGAAGAAGAAGACCAGGACATGGATGCAGATGACAGAGTGGTGGTAGAGTACCACGAGGAGCTCCCGGCTCTCAA GCAGCCCCGGGAGCGGAGCGCGTCTAGACGATCCAGTGCCAGCAGCTCAGACTCAGATGAAATGGACTATGATCTAGAACTGAAAATGAT TTCCACGCCTTCACCAAAGAAAAGCATGAAAATGACTATGTATGCTGACGAAGTGGAATCTCAGTTGAAAAATATTAGGAACTCCATGAG GGCAGATAGTGTATCTTCAAGCAATATCAAAAACCGAATTGGTAACAAATTACCACCTGAGAAATTTGCAGATGTCCGACATCTATTAGA TGAGAAACGTCAGCACTCCCGTCCACGGCCACCAGTCAGCAGTACTAAATCAGATATACGCCAGCGGTTAGGAAAAAGACCACATTCTCC GGAAAAGGCTTTTAGTAGTAACCCCGTCGTTCGGAGAGAGCCCTCTTCTGATGTGCATAGTAGGCTAGGTGTTCCCAGGCAGGATAGTAA AGGCCTCTACGCCGATACTCGGGAGAAGAAATCAGAGCTCCCGAGTGAGGAAGGGAAGTCCCTGTGGGAGCTGGTGCTGGAACAGTTTGA GGACCTCCTGGTGCGCATCCTGCTGCTGGCTGCCCTTGTCTCCTTTGTCCTGGCCTGGTTCGAGGAGGGCGAGGAGACCACGACCGCCTT CGTGGAGCCCCTGGTCATCATGCTGATCCTCGTGGCCAACGCCATTGTGGGCGTGTGGCAGGAACGCAACGCCGAGAGTGCCATCGAGGC CCTGAAGGAGTATGAGCCTGAGATGGGCAAGGTGATCCGCTCGGACCGCAAGGGCGTGCAGAGGATCCGTGCCCGGGACATCGTCCCAGG GGACATTGTAGAAGTGGCAGTGGGGGACAAAGTGCCTGCTGACCTCCGCCTCATCGAGATCAAGTCCACCACGCTGCGAGTGGACCAGTC CATCCTGACGGGTGAATCTGTGTCCGTGACCAAGCACACAGAGGCCATCCCAGACCCCAGAGCTGTGAACCAGGACAAGAAGAACATGCT GTTTTCTGGCACCAATATCACATCGGGCAAAGCGGTGGGTGTGGCCGTGGCCACCGGCCTGCACACGGAGCTGGGCAAGATCCGGAGCCA GATGGCGGCAGTCGAGCCCGAGCGGACGCCGCTGCAGCGCAAGCTGGACGAGTTTGGACGGCAGCTGTCCCACGCCATCTCTGTGATCTG CGTGGCCGTGTGGGTCATCAACATCGGCCACTTCGCCGACCCGGCCCACGGTGGCTCCTGGCTGCGTGGCGCTGTCTACTACTTCAAGAT CGCCGTGGCCCTGGCGGTGGCGGCCATCCCCGAGGGCCTCCCGGCTGTCATCACTACATGCCTGGCACTGGGCACGCGGCGCATGGCACG CAAGAACGCCATCGTGCGAAGCCTGCCGTCCGTGGAGACCCTGGGCTGCACCTCAGTCATCTGCTCCGACAAGACGGGCACGCTCACCAC CAATCAGATGTCTGTCTGCCGGATGTTCGTGGTAGCCGAGGCCGATGCGGGCTCCTGCCTTTTGCACGAGTTCACCATCTCGGGTACCAC GTATACCCCCGAGGGCGAAGTGCGGCAGGGGGATCAGCCTGTGCGCTGCGGCCAGTTCGACGGGCTGGTGGAGCTGGCGACCATCTGCGC CCTGTGCAACGACTCGGCTCTGGACTACAACGAGGCCAAGGGTGTGTATGAGAAGGTGGGAGAGGCCACGGAGACAGCTCTGACTTGCCT GGTGGAGAAGATGAACGTGTTCGACACCGACCTGCAGGCTCTGTCCCGGGTGGAGCGAGCTGGCGCCTGTAACACGGTCATCAAGCAGCT GATGCGGAAGGAGTTCACCCTGGAGTTCTCCCGAGACCGGAAATCCATGTCCGTGTACTGCACGCCCACCCGCCCTCACCCTACTGGCCA GGGCAGCAAGATGTTTGTGAAGGGGGCTCCTGAGAGTGTGATCGAGCGCTGTAGCTCAGTCCGCGTGGGGAGCCGCACAGCACCCCTGAC CCCCACCTCCAGGGAGCAGATCCTGGCAAAGATCCGGGATTGGGGCTCAGGCTCAGACACGCTGCGCTGCCTGGCACTGGCCACCCGGGA CGCGCCCCCAAGGAAGGAGGACATGGAGCTGGACGACTGCAGCAAGTTTGTGCAGTACGAGACGGACCTGACCTTCGTGGGCTGCGTAGG CATGCTGGACCCGCCGCGACCTGAGGTGGCTGCCTGCATCACACGCTGCTACCAGGCGGGCATCCGCGTGGTCATGATCACGGGGGATAA CAAAGGCACTGCCGTGGCCATCTGCCGCAGGCTTGGCATCTTTGGGGACACGGAAGACGTGGCGGGCAAGGCCTACACGGGCCGCGAGTT TGATGACCTCAGCCCCGAGCAGCAGCGCCAGGCCTGCCGCACCGCCCGCTGCTTCGCCCGCGTGGAGCCCGCACACAAGTCCCGCATCGT GGAGAACCTGCAGTCCTTTAACGAGATCACTGCTATGACTGGCGATGGAGTGAACGACGCACCAGCCCTGAAGAAAGCAGAGATCGGCAT CGCCATGGGCTCAGGCACGGCCGTGGCCAAGTCGGCGGCAGAGATGGTGCTGTCAGATGACAACTTTGCCTCCATCGTGGCTGCGGTGGA GGAGGGCCGGGCCATCTACAGCAACATGAAGCAATTCATCCGCTACCTCATCTCCTCCAATGTTGGCGAGGTCGTCTGCATCTTCCTCAC GGCAATTCTGGGCCTGCCCGAAGCCCTGATCCCTGTGCAGCTGCTCTGGGTGAACCTGGTGACAGACGGCCTACCTGCCACGGCTCTGGG CTTCAACCCGCCAGACCTGGACATCATGGAGAAGCTGCCCCGGAGCCCCCGAGAAGCCCTCATCAGTGGCTGGCTCTTCTTCCGATACCT GGCTATCGGAGTGTACGTAGGCCTGGCCACAGTGGCTGCCGCCACCTGGTGGTTTGTGTATGACGCCGAGGGACCTCACATCAACTTCTA CCAGCTGAGGAACTTCCTGAAGTGCTCCGAAGACAACCCGCTCTTTGCCGGCATCGACTGTGAGGTGTTCGAGTCACGCTTCCCCACCAC CATGGCCTTGTCCGTGCTCGTGACCATTGAAATGTGCAATGCCCTCAACAGCGTCTCGGAGAACCAGTCGCTGCTGCGGATGCCGCCCTG GATGAACCCCTGGCTGCTGGTGGCTGTGGCCATGTCCATGGCCCTGCACTTCCTCATCCTGCTCGTGCCGCCCCTGCCTCTCATTTTCCA GGTGACCCCACTGAGCGGGCGCCAGTGGGTGGTGGTGCTCCAGATATCTCTGCCTGTCATCCTGCTGGATGAGGCCCTCAAGTACCTGTC CCGGAACCACATGCACGCCTGTCTTTATCCAGGCCTTCTCAGGACAGTCTCGCAGGCCTGGAGTAGGCAGCCGCTGACCACCTCTTGGAC CCCAGACCACACCGGGTTGGCCTCTTTGAAGAAATGAGCCAGAAGTGAGCGCTGGGAACAGAGTGGAGTCTCCGGTGTGTACCTCAGACT GATGGTGCCCATGTGTTCGCCTCCGCCCCCCACCCTTGCCACCACACTCGCCCACTTGCCCACCGGGTCCCGCCGGATAAATGACAGGCC CGAGGTCAGAATGGCCATCCCCGGGCCCCGTCCTGGGGTCTCTGTCCCCACTTCCTTCTGGCCTGGGAGGTCTGTAATTCCTGTCTCCTG GACTCTCCTGGGAAGTTCCCTGCTCTGCAGCTCTGGCCCAGGAGCTGCAGGCTGGGAGGGGGCAGCCAAGAAGCCGGAGCTGGCAGCATA CCCAGAGATCCGGGGCCCCCCCACCCCCAAATCACGAGTGCAGCTGGAGCTTGCTCCCCCTTGTTCGGAAGCTGGACGTTCACTTGGTGA CTGGTGCCTCTGCACTGACGGAGGACTCTGGGGGTCCTTCTTACCGGCTCTGACCTCTCTCTTCGTGCCTGGTCTGGGACTGGGTCAGCC CTGGGGGATCAGAAGGGGCCATCTGGGCCCAGCTGTGTACAGCGAGGGTGGGCAGCCCCCTCCACTCCACTCTGCTTCCACAAAGTCGGC TCCCGAGAGCTCGAGGCTGCTTCTGTTTATATGTGCAGGGCCCGGGCGGGTGAAGGGTCAGAGAGACGGACACAAGGAGCCGGCAGGAGG GCGGAGCGAGGATGTCCTTTCCCGGGAGACAAGTCGGGAAAGCCTGGCTGGACTGCCTCAGCCCCGCGCGCCTCCTGGACTCAGGGTTCC CCGTCCTGAGCTCGGGAGATGTTCAGAGTCACACTGCCGCCCGGTCTGCCACGCAGAGGTCCAACTTGCCACCCGCGTCCCTGGTACCTG AGACCACCGACATCCTCAGGTTCCTGACCGTGGCGCCCTTCTACCCAGCCCAGTGTGCGGCCGCCGCGCTGTCTGCACAGCTGGGGGCCT CTGAGCCTGGTGGGCTTCCTGGACTCTTGGCCTCACTCCTTGCCCCCTCCCCACGACACCCATGAGCCGAAAGGATGTCACTAAGGATGG CTGATTCCCCAAGGGCACCCGCTCTCCCTCCCTCCCTGCTGGAGGAACACGTCATATCAGATGAGAGGAAGATGGCCTCTGATGGACAGA ATTTTTCTCTTAACTCAGCTTTTGCTACTTTGGCAAAAACTAGCGAGGGGTAGCAGAAACCTGCACCAAGGATTGTCCCTATGTCTTGGC CACTCCTAGAGCGTGTGCAGACTGATGATTTTATATGTAAATCAAGACTCACATCCCTTTCCTAGTCCCCCACATCCAAAGCCCCTCAGC CTGCCTTGCAGACCAATGGGCTCCATGTTCTGTAGCCCCCTCCCCTACGCCTCACCCCTCCTCCCTCTCACAGGTTCTGGGCGGCCAGTG AGAGAAACGCAGTGGGGGAGGCAGGGAGTCTGGTGCCTGCAGAGATTCTCTGCTTCTTTCCTGGGGGGAGGTGGGGAGGTCTTAGCAGGA >In-frame_ENST00000389005_ENST00000309890_TCGA-D9-A6E9-06A_C17orf85_chr17_3717616_-_ATP2A3_chr17_3857004_length(amino acids)=1532AA_start in transcript=28_stop in transcript=4626 MAAVRGLRVSVKAEAPAGPALGLPSPEAESGVDRGEPEPMEVEEGELEIVPVRRSLKELIPDTSRRYENKAGSFITGIDVTSKEAIEKKE QRAKRFHFRSEVNLAQRNVALDRDMMKKAIPKVRLETIYICGVDEMSTQDVFSYFKEYPPAHIEWLDDTSCNVVWLDEMTATRALINMSS LPAQDKIRSRDASEDKSAEKRKKDKQEDSSDDDEAEEGEVEDENSSDVELDTLSQVEEESLLRNDLRPANKLAKGNRLFMRFATKDDKKE LGAARRSQYYMKYGNPNYGGMKGILSNSWKRRYHSRRIQRDVIKKRALIGDDVGLTSYKHRHSGLVNVPEEPIEEEEEEEEEEEEEEEED QDMDADDRVVVEYHEELPALKQPRERSASRRSSASSSDSDEMDYDLELKMISTPSPKKSMKMTMYADEVESQLKNIRNSMRADSVSSSNI KNRIGNKLPPEKFADVRHLLDEKRQHSRPRPPVSSTKSDIRQRLGKRPHSPEKAFSSNPVVRREPSSDVHSRLGVPRQDSKGLYADTREK KSELPSEEGKSLWELVLEQFEDLLVRILLLAALVSFVLAWFEEGEETTTAFVEPLVIMLILVANAIVGVWQERNAESAIEALKEYEPEMG KVIRSDRKGVQRIRARDIVPGDIVEVAVGDKVPADLRLIEIKSTTLRVDQSILTGESVSVTKHTEAIPDPRAVNQDKKNMLFSGTNITSG KAVGVAVATGLHTELGKIRSQMAAVEPERTPLQRKLDEFGRQLSHAISVICVAVWVINIGHFADPAHGGSWLRGAVYYFKIAVALAVAAI PEGLPAVITTCLALGTRRMARKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCRMFVVAEADAGSCLLHEFTISGTTYTPEGEVRQ GDQPVRCGQFDGLVELATICALCNDSALDYNEAKGVYEKVGEATETALTCLVEKMNVFDTDLQALSRVERAGACNTVIKQLMRKEFTLEF SRDRKSMSVYCTPTRPHPTGQGSKMFVKGAPESVIERCSSVRVGSRTAPLTPTSREQILAKIRDWGSGSDTLRCLALATRDAPPRKEDME LDDCSKFVQYETDLTFVGCVGMLDPPRPEVAACITRCYQAGIRVVMITGDNKGTAVAICRRLGIFGDTEDVAGKAYTGREFDDLSPEQQR QACRTARCFARVEPAHKSRIVENLQSFNEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKSAAEMVLSDDNFASIVAAVEEGRAIYSNM KQFIRYLISSNVGEVVCIFLTAILGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMEKLPRSPREALISGWLFFRYLAIGVYVGLA TVAAATWWFVYDAEGPHINFYQLRNFLKCSEDNPLFAGIDCEVFESRFPTTMALSVLVTIEMCNALNSVSENQSLLRMPPWMNPWLLVAV AMSMALHFLILLVPPLPLIFQVTPLSGRQWVVVLQISLPVILLDEALKYLSRNHMHACLYPGLLRTVSQAWSRQPLTTSWTPDHTGLASL -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for C17orf85-ATP2A3 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000309890 | 0 | 22 | 370_400 | 39.333333333333336 | 1030.0 | phospholamban 1 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000352011 | 0 | 22 | 370_400 | 39.333333333333336 | 1044.0 | phospholamban 1 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000359983 | 0 | 23 | 370_400 | 39.333333333333336 | 1053.0 | phospholamban 1 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397035 | 0 | 23 | 370_400 | 39.333333333333336 | 1266.3333333333333 | phospholamban 1 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397041 | 0 | 21 | 370_400 | 39.333333333333336 | 1000.0 | phospholamban 1 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397043 | 0 | 21 | 370_400 | 39.333333333333336 | 999.0 | phospholamban 1 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000309890 | 0 | 22 | 788_808 | 39.333333333333336 | 1030.0 | phospholamban 2 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000352011 | 0 | 22 | 788_808 | 39.333333333333336 | 1044.0 | phospholamban 2 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000359983 | 0 | 23 | 788_808 | 39.333333333333336 | 1053.0 | phospholamban 2 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397035 | 0 | 23 | 788_808 | 39.333333333333336 | 1266.3333333333333 | phospholamban 2 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397041 | 0 | 21 | 788_808 | 39.333333333333336 | 1000.0 | phospholamban 2 | |
| Tgene | ATP2A3 | chr17:3717616 | chr17:3857004 | ENST00000397043 | 0 | 21 | 788_808 | 39.333333333333336 | 999.0 | phospholamban 2 |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for C17orf85-ATP2A3 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for C17orf85-ATP2A3 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Tgene | ATP2A3 | C0001430 | Adenoma | 1 | CTD_human |
| Tgene | ATP2A3 | C0002152 | Alloxan Diabetes | 1 | CTD_human |
| Tgene | ATP2A3 | C0011853 | Diabetes Mellitus, Experimental | 1 | CTD_human |
| Tgene | ATP2A3 | C0011860 | Diabetes Mellitus, Non-Insulin-Dependent | 1 | CTD_human |
| Tgene | ATP2A3 | C0038433 | Streptozotocin Diabetes | 1 | CTD_human |
| Tgene | ATP2A3 | C0205646 | Adenoma, Basal Cell | 1 | CTD_human |
| Tgene | ATP2A3 | C0205647 | Follicular adenoma | 1 | CTD_human |
| Tgene | ATP2A3 | C0205648 | Adenoma, Microcystic | 1 | CTD_human |
| Tgene | ATP2A3 | C0205649 | Adenoma, Monomorphic | 1 | CTD_human |
| Tgene | ATP2A3 | C0205650 | Papillary adenoma | 1 | CTD_human |
| Tgene | ATP2A3 | C0205651 | Adenoma, Trabecular | 1 | CTD_human |
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