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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:C19orf52-PDE4A (FusionGDB2 ID:11282)

Fusion Gene Summary for C19orf52-PDE4A

check button Fusion gene summary
Fusion gene informationFusion gene name: C19orf52-PDE4A
Fusion gene ID: 11282
HgeneTgene
Gene symbol

C19orf52

PDE4A

Gene ID

90580

5141

Gene nametranslocase of inner mitochondrial membrane 29phosphodiesterase 4A
SynonymsC19orf52|TIM29DPDE2|PDE4|PDE46
Cytomap

19p13.2

19p13.2

Type of geneprotein-codingprotein-coding
Descriptionmitochondrial import inner membrane translocase subunit Tim29uncharacterized protein C19orf52cAMP-specific 3',5'-cyclic phosphodiesterase 4Aphosphodiesterase 4A, cAMP-specific (duncephosphodiesterase E2 dunce homolog, Drosophilaphosphodiesterase isozyme 4
Modification date2020031320200313
UniProtAcc..
Ensembl transtripts involved in fusion geneENST00000270502, ENST00000593162, 
ENST00000592685, ENST00000380702, 
ENST00000352831, ENST00000293683, 
ENST00000440014, ENST00000344979, 
Fusion gene scores* DoF score2 X 3 X 2=129 X 9 X 8=648
# samples 212
** MAII scorelog2(2/12*10)=0.736965594166206
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0		log2(12/648*10)=-2.43295940727611
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: C19orf52 [Title/Abstract] AND PDE4A [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointC19orf52(11040273)-PDE4A(10574469), # samples:1
C19orf52(11040684)-PDE4A(10574469), # samples:1
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneC19orf52

GO:0045039

protein import into mitochondrial inner membrane

28712724|28712726


check buttonFusion gene breakpoints across C19orf52 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonFusion gene breakpoints across PDE4A (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4OVTCGA-09-2054-01AC19orf52chr19

11040273

+PDE4Achr19

10574469

+
ChimerDB4OVTCGA-09-2054-01AC19orf52chr19

11040684

+PDE4Achr19

10574469

+


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Fusion Gene ORF analysis for C19orf52-PDE4A

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000270502ENST00000592685C19orf52chr19

11040273

+PDE4Achr19

10574469

+
In-frameENST00000270502ENST00000380702C19orf52chr19

11040273

+PDE4Achr19

10574469

+
In-frameENST00000270502ENST00000352831C19orf52chr19

11040273

+PDE4Achr19

10574469

+
In-frameENST00000270502ENST00000293683C19orf52chr19

11040273

+PDE4Achr19

10574469

+
In-frameENST00000270502ENST00000440014C19orf52chr19

11040273

+PDE4Achr19

10574469

+
In-frameENST00000270502ENST00000344979C19orf52chr19

11040273

+PDE4Achr19

10574469

+
intron-3CDSENST00000593162ENST00000592685C19orf52chr19

11040273

+PDE4Achr19

10574469

+
intron-3CDSENST00000593162ENST00000380702C19orf52chr19

11040273

+PDE4Achr19

10574469

+
intron-3CDSENST00000593162ENST00000352831C19orf52chr19

11040273

+PDE4Achr19

10574469

+
intron-3CDSENST00000593162ENST00000293683C19orf52chr19

11040273

+PDE4Achr19

10574469

+
intron-3CDSENST00000593162ENST00000440014C19orf52chr19

11040273

+PDE4Achr19

10574469

+
intron-3CDSENST00000593162ENST00000344979C19orf52chr19

11040273

+PDE4Achr19

10574469

+
3UTR-3CDSENST00000270502ENST00000592685C19orf52chr19

11040684

+PDE4Achr19

10574469

+
3UTR-3CDSENST00000270502ENST00000380702C19orf52chr19

11040684

+PDE4Achr19

10574469

+
3UTR-3CDSENST00000270502ENST00000352831C19orf52chr19

11040684

+PDE4Achr19

10574469

+
3UTR-3CDSENST00000270502ENST00000293683C19orf52chr19

11040684

+PDE4Achr19

10574469

+
3UTR-3CDSENST00000270502ENST00000440014C19orf52chr19

11040684

+PDE4Achr19

10574469

+
3UTR-3CDSENST00000270502ENST00000344979C19orf52chr19

11040684

+PDE4Achr19

10574469

+
intron-3CDSENST00000593162ENST00000592685C19orf52chr19

11040684

+PDE4Achr19

10574469

+
intron-3CDSENST00000593162ENST00000380702C19orf52chr19

11040684

+PDE4Achr19

10574469

+
intron-3CDSENST00000593162ENST00000352831C19orf52chr19

11040684

+PDE4Achr19

10574469

+
intron-3CDSENST00000593162ENST00000293683C19orf52chr19

11040684

+PDE4Achr19

10574469

+
intron-3CDSENST00000593162ENST00000440014C19orf52chr19

11040684

+PDE4Achr19

10574469

+
intron-3CDSENST00000593162ENST00000344979C19orf52chr19

11040684

+PDE4Achr19

10574469

+

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000270502C19orf52chr1911040273+ENST00000592685PDE4Achr1910574469+17878418531758301
ENST00000270502C19orf52chr1911040273+ENST00000380702PDE4Achr1910574469+37678418531758301
ENST00000270502C19orf52chr1911040273+ENST00000352831PDE4Achr1910574469+26318418531758301
ENST00000270502C19orf52chr1911040273+ENST00000293683PDE4Achr1910574469+17598418531758302
ENST00000270502C19orf52chr1911040273+ENST00000440014PDE4Achr1910574469+17598418531758302
ENST00000270502C19orf52chr1911040273+ENST00000344979PDE4Achr1910574469+20698418531758301

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000270502ENST00000592685C19orf52chr1911040273+PDE4Achr1910574469+0.0123979060.98760206
ENST00000270502ENST00000380702C19orf52chr1911040273+PDE4Achr1910574469+0.0072138950.9927861
ENST00000270502ENST00000352831C19orf52chr1911040273+PDE4Achr1910574469+0.0102916370.98970836
ENST00000270502ENST00000293683C19orf52chr1911040273+PDE4Achr1910574469+0.0129232470.9870768
ENST00000270502ENST00000440014C19orf52chr1911040273+PDE4Achr1910574469+0.0129232470.9870768
ENST00000270502ENST00000344979C19orf52chr1911040273+PDE4Achr1910574469+0.0102718740.98972815

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Fusion Genomic Features for C19orf52-PDE4A


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for C19orf52-PDE4A


check button Go to

FGviewer for the breakpoints of chr19:11040273-chr19:10574469

.
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
..
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgenePDE4Achr19:11040273chr19:10574469ENST00000344979710357_686342.0648.0DomainPDEase
TgenePDE4Achr19:11040273chr19:10574469ENST00000344979710433_437342.0648.0Nucleotide bindingcAMP

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneC19orf52chr19:11040273chr19:10574469ENST00000270502+1232_590261.0Topological domainMitochondrial matrix
HgeneC19orf52chr19:11040273chr19:10574469ENST00000270502+1278_2600261.0Topological domainMitochondrial intermembrane
HgeneC19orf52chr19:11040273chr19:10574469ENST00000270502+1260_770261.0TransmembraneHelical
TgenePDE4Achr19:11040273chr19:10574469ENST000002936831215357_686555.0861.0DomainPDEase
TgenePDE4Achr19:11040273chr19:10574469ENST000003528311215357_686581.0887.0DomainPDEase
TgenePDE4Achr19:11040273chr19:10574469ENST000003807021316357_686559.0865.0DomainPDEase
TgenePDE4Achr19:11040273chr19:10574469ENST000004400141215357_686520.0826.0DomainPDEase
TgenePDE4Achr19:11040273chr19:10574469ENST000005926851417357_686559.0865.0DomainPDEase
TgenePDE4Achr19:11040273chr19:10574469ENST000002936831215433_437555.0861.0Nucleotide bindingcAMP
TgenePDE4Achr19:11040273chr19:10574469ENST000003528311215433_437581.0887.0Nucleotide bindingcAMP
TgenePDE4Achr19:11040273chr19:10574469ENST000003807021316433_437559.0865.0Nucleotide bindingcAMP
TgenePDE4Achr19:11040273chr19:10574469ENST000004400141215433_437520.0826.0Nucleotide bindingcAMP
TgenePDE4Achr19:11040273chr19:10574469ENST000005926851417433_437559.0865.0Nucleotide bindingcAMP


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Fusion Gene Sequence for C19orf52-PDE4A


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>In-frame_ENST00000270502_ENST00000592685_TCGA-09-2054-01A_C19orf52_chr19_11040273_+_PDE4A_chr19_10574469_length(transcript)=1787nt_BP=841nt
GTTGGCGCTTGCGCAGAAGAGACTCCCGGGCTCTTAACGTCGGGTATCAGGAGTTTCTTCCCGGAGCAAGGACCCCCAAGACGGAAGAGG
ATGGCCGCGGCGGCTCTGAGGAGATTTTGGTCCCGGCGCCGCGCAGAGGCGGGCGACGCGGTAGTGGCGAAGCCGGGAGTGTGGGCGCGG
CTGGGTGGACCAGGCGCTGTGGGAGGAGCAGGTCTTGCAGAAGGAGAAGAAGGACAGGCTCGCCCTGAGCCAGGCCCACTCGCTGGTGCA
GGCGGAGGCCCCGAGATGAAACCCTGAGGCCCCCGAGTCCTGGCAAACTGCTTGCCTGGGGTGGTGCAGTTCTGAGTGTGCCTCACCTGC
AGAACAGCTGAGACAGATGATGTGCAAAGTGTTTTCTCACTGGATTTGCACAAGTTTGGGGAGCCTTTCTGCCCCCCGTCTTTGTTCTTT
ATTAGCTGAAGCTAATTCAGAGCCACCTGGGTCCGGGAGTTGGGGACAGCAGAACGACTTGACACATGTTCATCACTGGCAGAGCTGGTC
ATGAGCCTTTTATATAAGCCTTTTTCATCGGGCCTCAGAGGCCCTCCTTAAGGAGGTACCACATTGGTCAGCTGACTTGCAAACTCTTCT
AAGGCCACTTAGATTTTCTTTTTCAAGTTTGGGTTGTGGCCTGGCATGGTGATGTCTGTAATCCCAGCAGTTTGCAAACTGAGGCAAGAG
AATCGCTTGAGGCCAGGAGTTTGAGGCCAGCTAGAGTGACATAGCAAGACTCCGATGCTACAAAAAAGAATAATAATAGTAATTAACTAA
ATAAAATTTGAGCTGAAATGTTTTTATTCTAGTCCTCCGGAACATGGTGCACTGTGCCGACCTCAGCAACCCCACCAAGCCGCTGGAGCT
GTACCGCCAGTGGACAGACCGCATCATGGCCGAGTTCTTCCAGCAGGGTGACCGAGAGCGCGAGCGTGGCATGGAAATCAGCCCCATGTG
TGACAAGCACACTGCCTCCGTGGAGAAGTCTCAGGTGGGTTTTATTGACTACATTGTGCACCCATTGTGGGAGACCTGGGCGGACCTTGT
CCACCCAGATGCCCAGGAGATCTTGGACACTTTGGAGGACAACCGGGACTGGTACTACAGCGCCATCCGGCAGAGCCCATCTCCGCCACC
CGAGGAGGAGTCAAGGGGGCCAGGCCACCCACCCCTGCCTGACAAGTTCCAGTTTGAGCTGACGCTGGAGGAGGAAGAGGAGGAAGAAAT
ATCAATGGCCCAGATACCGTGCACAGCCCAAGAGGCATTGACTGCGCAGGGATTGTCAGGAGTCGAGGAAGCTCTGGATGCAACCATAGC
CTGGGAGGCATCCCCGGCCCAGGAGTCGTTGGAAGTTATGGCACAGGAAGCATCCCTGGAGGCCGAGCTGGAGGCAGTGTATTTGACACA
GCAGGCACAGTCCACAGGCAGTGCACCTGTGGCTCCGGATGAGTTCTCGTCCCGGGAGGAATTCGTGGTTGCTGTAAGCCACAGCAGCCC
CTCTGCCCTGGCTCTTCAAAGCCCCCTTCTCCCTGCTTGGAGGACCCTGTCTGTTTCAGAGCATGCCCCGGGCCTCCCGGGCCTCCCCTC
CACGGCGGCCGAGGTGGAGGCCCAACGAGAGCACCAGGCTGCCAAGAGGGCTTGCAGTGCCTGCGCAGGGACATTTGGGGAGGACACATC

>In-frame_ENST00000270502_ENST00000592685_TCGA-09-2054-01A_C19orf52_chr19_11040273_+_PDE4A_chr19_10574469_length(amino acids)=301AA_start in transcript=853_stop in transcript=1758
MVHCADLSNPTKPLELYRQWTDRIMAEFFQQGDRERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWETWADLVHPDAQEILDTLEDN
RDWYYSAIRQSPSPPPEEESRGPGHPPLPDKFQFELTLEEEEEEEISMAQIPCTAQEALTAQGLSGVEEALDATIAWEASPAQESLEVMA
QEASLEAELEAVYLTQQAQSTGSAPVAPDEFSSREEFVVAVSHSSPSALALQSPLLPAWRTLSVSEHAPGLPGLPSTAAEVEAQREHQAA

--------------------------------------------------------------
>In-frame_ENST00000270502_ENST00000380702_TCGA-09-2054-01A_C19orf52_chr19_11040273_+_PDE4A_chr19_10574469_length(transcript)=3767nt_BP=841nt
GTTGGCGCTTGCGCAGAAGAGACTCCCGGGCTCTTAACGTCGGGTATCAGGAGTTTCTTCCCGGAGCAAGGACCCCCAAGACGGAAGAGG
ATGGCCGCGGCGGCTCTGAGGAGATTTTGGTCCCGGCGCCGCGCAGAGGCGGGCGACGCGGTAGTGGCGAAGCCGGGAGTGTGGGCGCGG
CTGGGTGGACCAGGCGCTGTGGGAGGAGCAGGTCTTGCAGAAGGAGAAGAAGGACAGGCTCGCCCTGAGCCAGGCCCACTCGCTGGTGCA
GGCGGAGGCCCCGAGATGAAACCCTGAGGCCCCCGAGTCCTGGCAAACTGCTTGCCTGGGGTGGTGCAGTTCTGAGTGTGCCTCACCTGC
AGAACAGCTGAGACAGATGATGTGCAAAGTGTTTTCTCACTGGATTTGCACAAGTTTGGGGAGCCTTTCTGCCCCCCGTCTTTGTTCTTT
ATTAGCTGAAGCTAATTCAGAGCCACCTGGGTCCGGGAGTTGGGGACAGCAGAACGACTTGACACATGTTCATCACTGGCAGAGCTGGTC
ATGAGCCTTTTATATAAGCCTTTTTCATCGGGCCTCAGAGGCCCTCCTTAAGGAGGTACCACATTGGTCAGCTGACTTGCAAACTCTTCT
AAGGCCACTTAGATTTTCTTTTTCAAGTTTGGGTTGTGGCCTGGCATGGTGATGTCTGTAATCCCAGCAGTTTGCAAACTGAGGCAAGAG
AATCGCTTGAGGCCAGGAGTTTGAGGCCAGCTAGAGTGACATAGCAAGACTCCGATGCTACAAAAAAGAATAATAATAGTAATTAACTAA
ATAAAATTTGAGCTGAAATGTTTTTATTCTAGTCCTCCGGAACATGGTGCACTGTGCCGACCTCAGCAACCCCACCAAGCCGCTGGAGCT
GTACCGCCAGTGGACAGACCGCATCATGGCCGAGTTCTTCCAGCAGGGTGACCGAGAGCGCGAGCGTGGCATGGAAATCAGCCCCATGTG
TGACAAGCACACTGCCTCCGTGGAGAAGTCTCAGGTGGGTTTTATTGACTACATTGTGCACCCATTGTGGGAGACCTGGGCGGACCTTGT
CCACCCAGATGCCCAGGAGATCTTGGACACTTTGGAGGACAACCGGGACTGGTACTACAGCGCCATCCGGCAGAGCCCATCTCCGCCACC
CGAGGAGGAGTCAAGGGGGCCAGGCCACCCACCCCTGCCTGACAAGTTCCAGTTTGAGCTGACGCTGGAGGAGGAAGAGGAGGAAGAAAT
ATCAATGGCCCAGATACCGTGCACAGCCCAAGAGGCATTGACTGCGCAGGGATTGTCAGGAGTCGAGGAAGCTCTGGATGCAACCATAGC
CTGGGAGGCATCCCCGGCCCAGGAGTCGTTGGAAGTTATGGCACAGGAAGCATCCCTGGAGGCCGAGCTGGAGGCAGTGTATTTGACACA
GCAGGCACAGTCCACAGGCAGTGCACCTGTGGCTCCGGATGAGTTCTCGTCCCGGGAGGAATTCGTGGTTGCTGTAAGCCACAGCAGCCC
CTCTGCCCTGGCTCTTCAAAGCCCCCTTCTCCCTGCTTGGAGGACCCTGTCTGTTTCAGAGCATGCCCCGGGCCTCCCGGGCCTCCCCTC
CACGGCGGCCGAGGTGGAGGCCCAACGAGAGCACCAGGCTGCCAAGAGGGCTTGCAGTGCCTGCGCAGGGACATTTGGGGAGGACACATC
CGCACTCCCAGCTCCTGGTGGCGGGGGGTCAGGTGGAGACCCTACCTGATCCCCAGACCTCTGTCCCTGTTCCCCTCCACTCCTCCCCTC
ACTCCCCTGCTCCCCCGACCACCTCCTCCTCTGCCTCAAAGACTCTTGTCCTCTTGTCCCTCCTGAGAAAAAAGAAAACGAAAAGTGGGG
TTTTTTTCTGTTTTCTTTTTTTCCCCTTTCCCCCTGCCCCCACCCACGGGGCCTTTTTTTGGAGGTGGGGGCTGGGGAATGAGGGGCTGA
GGTCCCGGAAGGGATTTTATTTTTTTGAATTTTAATTGTAACATTTTTAGAAAAAGAACAAAAAAAGAAAAAAAAAAGAAAGAAACACAG
CAACTGTAGATGCTCCTGTTCCTGGTTCCCGCTTTCCACTTCCAAATCCCTCCCCTCACCTTCCCCCACTGCCCCCCAAGTTCCAGGCTC
AGTCTTCCAGCCGCCTGGGGAGTCTCTACCTGGGCCCAAGCAGGTGTGGGGCCTCCTTCTGGGCTTTTCTTCTGAATTTAGAGGATTTCT
AGAACGTGGTCAGGAATAGCCATTCTAGGCGGGGCTGGGGCCAGGGTGGGGGGCAGTCACTGTGGGAGGTCCCAGCTCCAGCCCCCCTCT
GGTTTGCTGCCTCCTCTCCCCTCTAAAAAAGTCTTCCGCTTGATTTTGCACAATCCCGGCGATACTCCTGGCGATACTGACTAGAAAGTC
AGGGAGCTGGGGGAGCTGTTCACTTTAGGATACGGGGGTGGTATGGAAGGGAGCGTTCACACCGCCAGCCTCGGGCCTGGGATTTGAGGA
GGGCCCTAGACCTCCTCCACTCTCCATCCCCTTTCCCTTCCACTTTGGGTTCACTTTGAATTTTCTCCGTTTTTTGGGGCAGTGGCTCTG
ATCCACTCACCCCCCCGCCCCCCGCCCCACTTCTAGCTGCTTCTCCTCTTGTTTCTGCCTTAATAATTCCCACGGCCACAGGCAAGGGGG
TTGCAGTGGCCGCCTGCACCTTGGATGAGGCAGGGCCAGGCGCCCAGAACCCCCATCCTGGCCGCACCCCCCTTTCCAGGGTCCTCCGGA
CCCCACCTTCCACACTCTGATCACAGCCCCCCTACCTTTTGCCCTAGGAGGAAGCAATAATGGTGTATACCCTCATTCTCATTCCTGGGC
AGCCCTTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGCCTCTCCCTCTCCCCCAGCTAGTCCCTGAGCA
ATACGGCAGACAGATGCAAGACCATTTTTCTCCAAGCCATGGGGGACTGTTTGGAAGGAAAGCCCCCTCTCTCCCTCCTCCCCTCGCCCT
CGGCCTGGTTCTGCAGCTGGACCGACCTCATTCATCGCCTGCCCCCTACCCAATTCTGAGCACACGGTACTGTAGCCCCCAGTTCCTCCC
TAGCCTTCCATCCCTCTGTCCACCCCAGGGGGAGGTAACCCCGCACTCACACTCCCTTGATGCTGTCTGTACAGGGTTCATATTTTGTAG
CGAAAGTCGTTTTTGTCCCAGCCGGCGATCGGAGTGGGCCTTTTCTTTCTTTTTGTTCATTCTTTACCTTTTTTTCTTTTCTTTCTTTCT
TTTTTGTACATACTGTAAGGTTGGTTTGTAAATTATTCTACGGAGGCAAAAAGGGAAAATAAAAACTTGCCCTTCCCTGGCTGACCCAGT
CGGGAAGGTAGGGAAGGAGGTCTCCCGTTGGGAGAGTCTCTGTTCCTGCTGTATTATACAAACTGTACCATAGTCCTGGGAAAAGGGTGG
ACTCACCGCTGTTGTTTTATGGGAAGTCGTGTCATCCTAGGGGTTGGGGCTGGGCAGAGCCTGTCCCCTCCCCCCTTCTCCAGGAGCCAG
GGGGTGACTGGAGAGACAGACCCACCCCCAAGCAGGGCTCCTCTCCCCAGGGTGAGCACAGGACCTCTGTAAGCTGCTTGTGTATTGTCC

>In-frame_ENST00000270502_ENST00000380702_TCGA-09-2054-01A_C19orf52_chr19_11040273_+_PDE4A_chr19_10574469_length(amino acids)=301AA_start in transcript=853_stop in transcript=1758
MVHCADLSNPTKPLELYRQWTDRIMAEFFQQGDRERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWETWADLVHPDAQEILDTLEDN
RDWYYSAIRQSPSPPPEEESRGPGHPPLPDKFQFELTLEEEEEEEISMAQIPCTAQEALTAQGLSGVEEALDATIAWEASPAQESLEVMA
QEASLEAELEAVYLTQQAQSTGSAPVAPDEFSSREEFVVAVSHSSPSALALQSPLLPAWRTLSVSEHAPGLPGLPSTAAEVEAQREHQAA

--------------------------------------------------------------
>In-frame_ENST00000270502_ENST00000352831_TCGA-09-2054-01A_C19orf52_chr19_11040273_+_PDE4A_chr19_10574469_length(transcript)=2631nt_BP=841nt
GTTGGCGCTTGCGCAGAAGAGACTCCCGGGCTCTTAACGTCGGGTATCAGGAGTTTCTTCCCGGAGCAAGGACCCCCAAGACGGAAGAGG
ATGGCCGCGGCGGCTCTGAGGAGATTTTGGTCCCGGCGCCGCGCAGAGGCGGGCGACGCGGTAGTGGCGAAGCCGGGAGTGTGGGCGCGG
CTGGGTGGACCAGGCGCTGTGGGAGGAGCAGGTCTTGCAGAAGGAGAAGAAGGACAGGCTCGCCCTGAGCCAGGCCCACTCGCTGGTGCA
GGCGGAGGCCCCGAGATGAAACCCTGAGGCCCCCGAGTCCTGGCAAACTGCTTGCCTGGGGTGGTGCAGTTCTGAGTGTGCCTCACCTGC
AGAACAGCTGAGACAGATGATGTGCAAAGTGTTTTCTCACTGGATTTGCACAAGTTTGGGGAGCCTTTCTGCCCCCCGTCTTTGTTCTTT
ATTAGCTGAAGCTAATTCAGAGCCACCTGGGTCCGGGAGTTGGGGACAGCAGAACGACTTGACACATGTTCATCACTGGCAGAGCTGGTC
ATGAGCCTTTTATATAAGCCTTTTTCATCGGGCCTCAGAGGCCCTCCTTAAGGAGGTACCACATTGGTCAGCTGACTTGCAAACTCTTCT
AAGGCCACTTAGATTTTCTTTTTCAAGTTTGGGTTGTGGCCTGGCATGGTGATGTCTGTAATCCCAGCAGTTTGCAAACTGAGGCAAGAG
AATCGCTTGAGGCCAGGAGTTTGAGGCCAGCTAGAGTGACATAGCAAGACTCCGATGCTACAAAAAAGAATAATAATAGTAATTAACTAA
ATAAAATTTGAGCTGAAATGTTTTTATTCTAGTCCTCCGGAACATGGTGCACTGTGCCGACCTCAGCAACCCCACCAAGCCGCTGGAGCT
GTACCGCCAGTGGACAGACCGCATCATGGCCGAGTTCTTCCAGCAGGGTGACCGAGAGCGCGAGCGTGGCATGGAAATCAGCCCCATGTG
TGACAAGCACACTGCCTCCGTGGAGAAGTCTCAGGTGGGTTTTATTGACTACATTGTGCACCCATTGTGGGAGACCTGGGCGGACCTTGT
CCACCCAGATGCCCAGGAGATCTTGGACACTTTGGAGGACAACCGGGACTGGTACTACAGCGCCATCCGGCAGAGCCCATCTCCGCCACC
CGAGGAGGAGTCAAGGGGGCCAGGCCACCCACCCCTGCCTGACAAGTTCCAGTTTGAGCTGACGCTGGAGGAGGAAGAGGAGGAAGAAAT
ATCAATGGCCCAGATACCGTGCACAGCCCAAGAGGCATTGACTGCGCAGGGATTGTCAGGAGTCGAGGAAGCTCTGGATGCAACCATAGC
CTGGGAGGCATCCCCGGCCCAGGAGTCGTTGGAAGTTATGGCACAGGAAGCATCCCTGGAGGCCGAGCTGGAGGCAGTGTATTTGACACA
GCAGGCACAGTCCACAGGCAGTGCACCTGTGGCTCCGGATGAGTTCTCGTCCCGGGAGGAATTCGTGGTTGCTGTAAGCCACAGCAGCCC
CTCTGCCCTGGCTCTTCAAAGCCCCCTTCTCCCTGCTTGGAGGACCCTGTCTGTTTCAGAGCATGCCCCGGGCCTCCCGGGCCTCCCCTC
CACGGCGGCCGAGGTGGAGGCCCAACGAGAGCACCAGGCTGCCAAGAGGGCTTGCAGTGCCTGCGCAGGGACATTTGGGGAGGACACATC
CGCACTCCCAGCTCCTGGTGGCGGGGGGTCAGGTGGAGACCCTACCTGATCCCCAGACCTCTGTCCCTGTTCCCCTCCACTCCTCCCCTC
ACTCCCCTGCTCCCCCGACCACCTCCTCCTCTGCCTCAAAGACTCTTGTCCTCTTGTCCCTCCTGAGAAAAAAGAAAACGAAAAGTGGGG
TTTTTTTCTGTTTTCTTTTTTTCCCCTTTCCCCCTGCCCCCACCCACGGGGCCTTTTTTTGGAGGTGGGGGCTGGGGAATGAGGGGCTGA
GGTCCCGGAAGGGATTTTATTTTTTTGAATTTTAATTGTAACATTTTTAGAAAAAGAACAAAAAAAGAAAAAAAAAAGAAAGAAACACAG
CAACTGTAGATGCTCCTGTTCCTGGTTCCCGCTTTCCACTTCCAAATCCCTCCCCTCACCTTCCCCCACTGCCCCCCAAGTTCCAGGCTC
AGTCTTCCAGCCGCCTGGGGAGTCTCTACCTGGGCCCAAGCAGGTGTGGGGCCTCCTTCTGGGCTTTTCTTCTGAATTTAGAGGATTTCT
AGAACGTGGTCAGGAATAGCCATTCTAGGCGGGGCTGGGGCCAGGGTGGGGGGCAGTCACTGTGGGAGGTCCCAGCTCCAGCCCCCCTCT
GGTTTGCTGCCTCCTCTCCCCTCTAAAAAAGTCTTCCGCTTGATTTTGCACAATCCCGGCGATACTCCTGGCGATACTGACTAGAAAGTC
AGGGAGCTGGGGGAGCTGTTCACTTTAGGATACGGGGGTGGTATGGAAGGGAGCGTTCACACCGCCAGCCTCGGGCCTGGGATTTGAGGA
GGGCCCTAGACCTCCTCCACTCTCCATCCCCTTTCCCTTCCACTTTGGGTTCACTTTGAATTTTCTCCGTTTTTTGGGGCAGTGGCTCTG

>In-frame_ENST00000270502_ENST00000352831_TCGA-09-2054-01A_C19orf52_chr19_11040273_+_PDE4A_chr19_10574469_length(amino acids)=301AA_start in transcript=853_stop in transcript=1758
MVHCADLSNPTKPLELYRQWTDRIMAEFFQQGDRERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWETWADLVHPDAQEILDTLEDN
RDWYYSAIRQSPSPPPEEESRGPGHPPLPDKFQFELTLEEEEEEEISMAQIPCTAQEALTAQGLSGVEEALDATIAWEASPAQESLEVMA
QEASLEAELEAVYLTQQAQSTGSAPVAPDEFSSREEFVVAVSHSSPSALALQSPLLPAWRTLSVSEHAPGLPGLPSTAAEVEAQREHQAA

--------------------------------------------------------------
>In-frame_ENST00000270502_ENST00000293683_TCGA-09-2054-01A_C19orf52_chr19_11040273_+_PDE4A_chr19_10574469_length(transcript)=1759nt_BP=841nt
GTTGGCGCTTGCGCAGAAGAGACTCCCGGGCTCTTAACGTCGGGTATCAGGAGTTTCTTCCCGGAGCAAGGACCCCCAAGACGGAAGAGG
ATGGCCGCGGCGGCTCTGAGGAGATTTTGGTCCCGGCGCCGCGCAGAGGCGGGCGACGCGGTAGTGGCGAAGCCGGGAGTGTGGGCGCGG
CTGGGTGGACCAGGCGCTGTGGGAGGAGCAGGTCTTGCAGAAGGAGAAGAAGGACAGGCTCGCCCTGAGCCAGGCCCACTCGCTGGTGCA
GGCGGAGGCCCCGAGATGAAACCCTGAGGCCCCCGAGTCCTGGCAAACTGCTTGCCTGGGGTGGTGCAGTTCTGAGTGTGCCTCACCTGC
AGAACAGCTGAGACAGATGATGTGCAAAGTGTTTTCTCACTGGATTTGCACAAGTTTGGGGAGCCTTTCTGCCCCCCGTCTTTGTTCTTT
ATTAGCTGAAGCTAATTCAGAGCCACCTGGGTCCGGGAGTTGGGGACAGCAGAACGACTTGACACATGTTCATCACTGGCAGAGCTGGTC
ATGAGCCTTTTATATAAGCCTTTTTCATCGGGCCTCAGAGGCCCTCCTTAAGGAGGTACCACATTGGTCAGCTGACTTGCAAACTCTTCT
AAGGCCACTTAGATTTTCTTTTTCAAGTTTGGGTTGTGGCCTGGCATGGTGATGTCTGTAATCCCAGCAGTTTGCAAACTGAGGCAAGAG
AATCGCTTGAGGCCAGGAGTTTGAGGCCAGCTAGAGTGACATAGCAAGACTCCGATGCTACAAAAAAGAATAATAATAGTAATTAACTAA
ATAAAATTTGAGCTGAAATGTTTTTATTCTAGTCCTCCGGAACATGGTGCACTGTGCCGACCTCAGCAACCCCACCAAGCCGCTGGAGCT
GTACCGCCAGTGGACAGACCGCATCATGGCCGAGTTCTTCCAGCAGGGTGACCGAGAGCGCGAGCGTGGCATGGAAATCAGCCCCATGTG
TGACAAGCACACTGCCTCCGTGGAGAAGTCTCAGGTGGGTTTTATTGACTACATTGTGCACCCATTGTGGGAGACCTGGGCGGACCTTGT
CCACCCAGATGCCCAGGAGATCTTGGACACTTTGGAGGACAACCGGGACTGGTACTACAGCGCCATCCGGCAGAGCCCATCTCCGCCACC
CGAGGAGGAGTCAAGGGGGCCAGGCCACCCACCCCTGCCTGACAAGTTCCAGTTTGAGCTGACGCTGGAGGAGGAAGAGGAGGAAGAAAT
ATCAATGGCCCAGATACCGTGCACAGCCCAAGAGGCATTGACTGCGCAGGGATTGTCAGGAGTCGAGGAAGCTCTGGATGCAACCATAGC
CTGGGAGGCATCCCCGGCCCAGGAGTCGTTGGAAGTTATGGCACAGGAAGCATCCCTGGAGGCCGAGCTGGAGGCAGTGTATTTGACACA
GCAGGCACAGTCCACAGGCAGTGCACCTGTGGCTCCGGATGAGTTCTCGTCCCGGGAGGAATTCGTGGTTGCTGTAAGCCACAGCAGCCC
CTCTGCCCTGGCTCTTCAAAGCCCCCTTCTCCCTGCTTGGAGGACCCTGTCTGTTTCAGAGCATGCCCCGGGCCTCCCGGGCCTCCCCTC
CACGGCGGCCGAGGTGGAGGCCCAACGAGAGCACCAGGCTGCCAAGAGGGCTTGCAGTGCCTGCGCAGGGACATTTGGGGAGGACACATC

>In-frame_ENST00000270502_ENST00000293683_TCGA-09-2054-01A_C19orf52_chr19_11040273_+_PDE4A_chr19_10574469_length(amino acids)=302AA_start in transcript=853_stop in transcript=1758
MVHCADLSNPTKPLELYRQWTDRIMAEFFQQGDRERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWETWADLVHPDAQEILDTLEDN
RDWYYSAIRQSPSPPPEEESRGPGHPPLPDKFQFELTLEEEEEEEISMAQIPCTAQEALTAQGLSGVEEALDATIAWEASPAQESLEVMA
QEASLEAELEAVYLTQQAQSTGSAPVAPDEFSSREEFVVAVSHSSPSALALQSPLLPAWRTLSVSEHAPGLPGLPSTAAEVEAQREHQAA

--------------------------------------------------------------
>In-frame_ENST00000270502_ENST00000440014_TCGA-09-2054-01A_C19orf52_chr19_11040273_+_PDE4A_chr19_10574469_length(transcript)=1759nt_BP=841nt
GTTGGCGCTTGCGCAGAAGAGACTCCCGGGCTCTTAACGTCGGGTATCAGGAGTTTCTTCCCGGAGCAAGGACCCCCAAGACGGAAGAGG
ATGGCCGCGGCGGCTCTGAGGAGATTTTGGTCCCGGCGCCGCGCAGAGGCGGGCGACGCGGTAGTGGCGAAGCCGGGAGTGTGGGCGCGG
CTGGGTGGACCAGGCGCTGTGGGAGGAGCAGGTCTTGCAGAAGGAGAAGAAGGACAGGCTCGCCCTGAGCCAGGCCCACTCGCTGGTGCA
GGCGGAGGCCCCGAGATGAAACCCTGAGGCCCCCGAGTCCTGGCAAACTGCTTGCCTGGGGTGGTGCAGTTCTGAGTGTGCCTCACCTGC
AGAACAGCTGAGACAGATGATGTGCAAAGTGTTTTCTCACTGGATTTGCACAAGTTTGGGGAGCCTTTCTGCCCCCCGTCTTTGTTCTTT
ATTAGCTGAAGCTAATTCAGAGCCACCTGGGTCCGGGAGTTGGGGACAGCAGAACGACTTGACACATGTTCATCACTGGCAGAGCTGGTC
ATGAGCCTTTTATATAAGCCTTTTTCATCGGGCCTCAGAGGCCCTCCTTAAGGAGGTACCACATTGGTCAGCTGACTTGCAAACTCTTCT
AAGGCCACTTAGATTTTCTTTTTCAAGTTTGGGTTGTGGCCTGGCATGGTGATGTCTGTAATCCCAGCAGTTTGCAAACTGAGGCAAGAG
AATCGCTTGAGGCCAGGAGTTTGAGGCCAGCTAGAGTGACATAGCAAGACTCCGATGCTACAAAAAAGAATAATAATAGTAATTAACTAA
ATAAAATTTGAGCTGAAATGTTTTTATTCTAGTCCTCCGGAACATGGTGCACTGTGCCGACCTCAGCAACCCCACCAAGCCGCTGGAGCT
GTACCGCCAGTGGACAGACCGCATCATGGCCGAGTTCTTCCAGCAGGGTGACCGAGAGCGCGAGCGTGGCATGGAAATCAGCCCCATGTG
TGACAAGCACACTGCCTCCGTGGAGAAGTCTCAGGTGGGTTTTATTGACTACATTGTGCACCCATTGTGGGAGACCTGGGCGGACCTTGT
CCACCCAGATGCCCAGGAGATCTTGGACACTTTGGAGGACAACCGGGACTGGTACTACAGCGCCATCCGGCAGAGCCCATCTCCGCCACC
CGAGGAGGAGTCAAGGGGGCCAGGCCACCCACCCCTGCCTGACAAGTTCCAGTTTGAGCTGACGCTGGAGGAGGAAGAGGAGGAAGAAAT
ATCAATGGCCCAGATACCGTGCACAGCCCAAGAGGCATTGACTGCGCAGGGATTGTCAGGAGTCGAGGAAGCTCTGGATGCAACCATAGC
CTGGGAGGCATCCCCGGCCCAGGAGTCGTTGGAAGTTATGGCACAGGAAGCATCCCTGGAGGCCGAGCTGGAGGCAGTGTATTTGACACA
GCAGGCACAGTCCACAGGCAGTGCACCTGTGGCTCCGGATGAGTTCTCGTCCCGGGAGGAATTCGTGGTTGCTGTAAGCCACAGCAGCCC
CTCTGCCCTGGCTCTTCAAAGCCCCCTTCTCCCTGCTTGGAGGACCCTGTCTGTTTCAGAGCATGCCCCGGGCCTCCCGGGCCTCCCCTC
CACGGCGGCCGAGGTGGAGGCCCAACGAGAGCACCAGGCTGCCAAGAGGGCTTGCAGTGCCTGCGCAGGGACATTTGGGGAGGACACATC

>In-frame_ENST00000270502_ENST00000440014_TCGA-09-2054-01A_C19orf52_chr19_11040273_+_PDE4A_chr19_10574469_length(amino acids)=302AA_start in transcript=853_stop in transcript=1758
MVHCADLSNPTKPLELYRQWTDRIMAEFFQQGDRERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWETWADLVHPDAQEILDTLEDN
RDWYYSAIRQSPSPPPEEESRGPGHPPLPDKFQFELTLEEEEEEEISMAQIPCTAQEALTAQGLSGVEEALDATIAWEASPAQESLEVMA
QEASLEAELEAVYLTQQAQSTGSAPVAPDEFSSREEFVVAVSHSSPSALALQSPLLPAWRTLSVSEHAPGLPGLPSTAAEVEAQREHQAA

--------------------------------------------------------------
>In-frame_ENST00000270502_ENST00000344979_TCGA-09-2054-01A_C19orf52_chr19_11040273_+_PDE4A_chr19_10574469_length(transcript)=2069nt_BP=841nt
GTTGGCGCTTGCGCAGAAGAGACTCCCGGGCTCTTAACGTCGGGTATCAGGAGTTTCTTCCCGGAGCAAGGACCCCCAAGACGGAAGAGG
ATGGCCGCGGCGGCTCTGAGGAGATTTTGGTCCCGGCGCCGCGCAGAGGCGGGCGACGCGGTAGTGGCGAAGCCGGGAGTGTGGGCGCGG
CTGGGTGGACCAGGCGCTGTGGGAGGAGCAGGTCTTGCAGAAGGAGAAGAAGGACAGGCTCGCCCTGAGCCAGGCCCACTCGCTGGTGCA
GGCGGAGGCCCCGAGATGAAACCCTGAGGCCCCCGAGTCCTGGCAAACTGCTTGCCTGGGGTGGTGCAGTTCTGAGTGTGCCTCACCTGC
AGAACAGCTGAGACAGATGATGTGCAAAGTGTTTTCTCACTGGATTTGCACAAGTTTGGGGAGCCTTTCTGCCCCCCGTCTTTGTTCTTT
ATTAGCTGAAGCTAATTCAGAGCCACCTGGGTCCGGGAGTTGGGGACAGCAGAACGACTTGACACATGTTCATCACTGGCAGAGCTGGTC
ATGAGCCTTTTATATAAGCCTTTTTCATCGGGCCTCAGAGGCCCTCCTTAAGGAGGTACCACATTGGTCAGCTGACTTGCAAACTCTTCT
AAGGCCACTTAGATTTTCTTTTTCAAGTTTGGGTTGTGGCCTGGCATGGTGATGTCTGTAATCCCAGCAGTTTGCAAACTGAGGCAAGAG
AATCGCTTGAGGCCAGGAGTTTGAGGCCAGCTAGAGTGACATAGCAAGACTCCGATGCTACAAAAAAGAATAATAATAGTAATTAACTAA
ATAAAATTTGAGCTGAAATGTTTTTATTCTAGTCCTCCGGAACATGGTGCACTGTGCCGACCTCAGCAACCCCACCAAGCCGCTGGAGCT
GTACCGCCAGTGGACAGACCGCATCATGGCCGAGTTCTTCCAGCAGGGTGACCGAGAGCGCGAGCGTGGCATGGAAATCAGCCCCATGTG
TGACAAGCACACTGCCTCCGTGGAGAAGTCTCAGGTGGGTTTTATTGACTACATTGTGCACCCATTGTGGGAGACCTGGGCGGACCTTGT
CCACCCAGATGCCCAGGAGATCTTGGACACTTTGGAGGACAACCGGGACTGGTACTACAGCGCCATCCGGCAGAGCCCATCTCCGCCACC
CGAGGAGGAGTCAAGGGGGCCAGGCCACCCACCCCTGCCTGACAAGTTCCAGTTTGAGCTGACGCTGGAGGAGGAAGAGGAGGAAGAAAT
ATCAATGGCCCAGATACCGTGCACAGCCCAAGAGGCATTGACTGCGCAGGGATTGTCAGGAGTCGAGGAAGCTCTGGATGCAACCATAGC
CTGGGAGGCATCCCCGGCCCAGGAGTCGTTGGAAGTTATGGCACAGGAAGCATCCCTGGAGGCCGAGCTGGAGGCAGTGTATTTGACACA
GCAGGCACAGTCCACAGGCAGTGCACCTGTGGCTCCGGATGAGTTCTCGTCCCGGGAGGAATTCGTGGTTGCTGTAAGCCACAGCAGCCC
CTCTGCCCTGGCTCTTCAAAGCCCCCTTCTCCCTGCTTGGAGGACCCTGTCTGTTTCAGAGCATGCCCCGGGCCTCCCGGGCCTCCCCTC
CACGGCGGCCGAGGTGGAGGCCCAACGAGAGCACCAGGCTGCCAAGAGGGCTTGCAGTGCCTGCGCAGGGACATTTGGGGAGGACACATC
CGCACTCCCAGCTCCTGGTGGCGGGGGGTCAGGTGGAGACCCTACCTGATCCCCAGACCTCTGTCCCTGTTCCCCTCCACTCCTCCCCTC
ACTCCCCTGCTCCCCCGACCACCTCCTCCTCTGCCTCAAAGACTCTTGTCCTCTTGTCCCTCCTGAGAAAAAAGAAAACGAAAAGTGGGG
TTTTTTTCTGTTTTCTTTTTTTCCCCTTTCCCCCTGCCCCCACCCACGGGGCCTTTTTTTGGAGGTGGGGGCTGGGGAATGAGGGGCTGA

>In-frame_ENST00000270502_ENST00000344979_TCGA-09-2054-01A_C19orf52_chr19_11040273_+_PDE4A_chr19_10574469_length(amino acids)=301AA_start in transcript=853_stop in transcript=1758
MVHCADLSNPTKPLELYRQWTDRIMAEFFQQGDRERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWETWADLVHPDAQEILDTLEDN
RDWYYSAIRQSPSPPPEEESRGPGHPPLPDKFQFELTLEEEEEEEISMAQIPCTAQEALTAQGLSGVEEALDATIAWEASPAQESLEVMA
QEASLEAELEAVYLTQQAQSTGSAPVAPDEFSSREEFVVAVSHSSPSALALQSPLLPAWRTLSVSEHAPGLPGLPSTAAEVEAQREHQAA

--------------------------------------------------------------

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Fusion Gene PPI Analysis for C19orf52-PDE4A


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for C19orf52-PDE4A


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for C19orf52-PDE4A


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
TgenePDE4AC0011570Mental Depression5PSYGENET
TgenePDE4AC0011581Depressive disorder5PSYGENET
TgenePDE4AC0036341Schizophrenia2PSYGENET
TgenePDE4AC0004352Autistic Disorder1CTD_human
TgenePDE4AC0005586Bipolar Disorder1PSYGENET
TgenePDE4AC0085159Seasonal Affective Disorder1PSYGENET