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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:CADPS2-LMOD2 (FusionGDB2 ID:12528) |
Fusion Gene Summary for CADPS2-LMOD2 |
Fusion gene summary |
Fusion gene information | Fusion gene name: CADPS2-LMOD2 | Fusion gene ID: 12528 | Hgene | Tgene | Gene symbol | CADPS2 | LMOD2 | Gene ID | 93664 | 442721 |
Gene name | calcium dependent secretion activator 2 | leiomodin 2 | |
Synonyms | CAPS2 | C-LMOD|CLMOD | |
Cytomap | 7q31.32 | 7q31.32 | |
Type of gene | protein-coding | protein-coding | |
Description | calcium-dependent secretion activator 2CAPS-2Ca++-dependent secretion activator 2Ca2+ dependent secretion activator 2Ca2+-dependent activator protein for secretion 2calcium-dependent activator protein for secretion 2 | leiomodin-2cardiac leiomodinleiomodin 2 (cardiac) | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | Q86UW7 | Q6P5Q4 | |
Ensembl transtripts involved in fusion gene | ENST00000313070, ENST00000334010, ENST00000412584, ENST00000449022, ENST00000476131, | ENST00000458573, ENST00000456238, | |
Fusion gene scores | * DoF score | 12 X 11 X 7=924 | 2 X 2 X 2=8 |
# samples | 14 | 4 | |
** MAII score | log2(14/924*10)=-2.72246602447109 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(4/8*10)=2.32192809488736 | |
Context | PubMed: CADPS2 [Title/Abstract] AND LMOD2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | CADPS2(122526053)-LMOD2(123301914), # samples:3 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | LMOD2 | GO:0030838 | positive regulation of actin filament polymerization | 26370058 |
Tgene | LMOD2 | GO:0045010 | actin nucleation | 20685966|26370058 |
Fusion gene breakpoints across CADPS2 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across LMOD2 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | BRCA | TCGA-A1-A0SN-01A | CADPS2 | chr7 | 122526053 | - | LMOD2 | chr7 | 123301914 | + |
ChimerDB4 | BRCA | TCGA-A1-A0SN | CADPS2 | chr7 | 122526052 | - | LMOD2 | chr7 | 123301913 | + |
ChimerDB4 | BRCA | TCGA-A1-A0SN-01A | CADPS2 | chr7 | 122526053 | - | LMOD2 | chr7 | 123301914 | + |
ChimerDB4 | BRCA | TCGA-A1-A0SN-01A | CADPS2 | chr7 | 122526053 | - | LMOD2 | chr7 | 123301914 | + |
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Fusion Gene ORF analysis for CADPS2-LMOD2 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000313070 | ENST00000458573 | CADPS2 | chr7 | 122526053 | - | LMOD2 | chr7 | 123301914 | + |
5CDS-intron | ENST00000313070 | ENST00000456238 | CADPS2 | chr7 | 122526053 | - | LMOD2 | chr7 | 123301914 | + |
In-frame | ENST00000334010 | ENST00000458573 | CADPS2 | chr7 | 122526053 | - | LMOD2 | chr7 | 123301914 | + |
5CDS-intron | ENST00000334010 | ENST00000456238 | CADPS2 | chr7 | 122526053 | - | LMOD2 | chr7 | 123301914 | + |
In-frame | ENST00000412584 | ENST00000458573 | CADPS2 | chr7 | 122526053 | - | LMOD2 | chr7 | 123301914 | + |
5CDS-intron | ENST00000412584 | ENST00000456238 | CADPS2 | chr7 | 122526053 | - | LMOD2 | chr7 | 123301914 | + |
In-frame | ENST00000449022 | ENST00000458573 | CADPS2 | chr7 | 122526053 | - | LMOD2 | chr7 | 123301914 | + |
5CDS-intron | ENST00000449022 | ENST00000456238 | CADPS2 | chr7 | 122526053 | - | LMOD2 | chr7 | 123301914 | + |
intron-3CDS | ENST00000476131 | ENST00000458573 | CADPS2 | chr7 | 122526053 | - | LMOD2 | chr7 | 123301914 | + |
intron-intron | ENST00000476131 | ENST00000456238 | CADPS2 | chr7 | 122526053 | - | LMOD2 | chr7 | 123301914 | + |
In-frame | ENST00000313070 | ENST00000458573 | CADPS2 | chr7 | 122526052 | - | LMOD2 | chr7 | 123301913 | + |
5CDS-intron | ENST00000313070 | ENST00000456238 | CADPS2 | chr7 | 122526052 | - | LMOD2 | chr7 | 123301913 | + |
In-frame | ENST00000334010 | ENST00000458573 | CADPS2 | chr7 | 122526052 | - | LMOD2 | chr7 | 123301913 | + |
5CDS-intron | ENST00000334010 | ENST00000456238 | CADPS2 | chr7 | 122526052 | - | LMOD2 | chr7 | 123301913 | + |
In-frame | ENST00000412584 | ENST00000458573 | CADPS2 | chr7 | 122526052 | - | LMOD2 | chr7 | 123301913 | + |
5CDS-intron | ENST00000412584 | ENST00000456238 | CADPS2 | chr7 | 122526052 | - | LMOD2 | chr7 | 123301913 | + |
In-frame | ENST00000449022 | ENST00000458573 | CADPS2 | chr7 | 122526052 | - | LMOD2 | chr7 | 123301913 | + |
5CDS-intron | ENST00000449022 | ENST00000456238 | CADPS2 | chr7 | 122526052 | - | LMOD2 | chr7 | 123301913 | + |
intron-3CDS | ENST00000476131 | ENST00000458573 | CADPS2 | chr7 | 122526052 | - | LMOD2 | chr7 | 123301913 | + |
intron-intron | ENST00000476131 | ENST00000456238 | CADPS2 | chr7 | 122526052 | - | LMOD2 | chr7 | 123301913 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000313070 | CADPS2 | chr7 | 122526053 | - | ENST00000458573 | LMOD2 | chr7 | 123301914 | + | 2677 | 761 | 422 | 2131 | 569 |
ENST00000334010 | CADPS2 | chr7 | 122526053 | - | ENST00000458573 | LMOD2 | chr7 | 123301914 | + | 2677 | 761 | 422 | 2131 | 569 |
ENST00000412584 | CADPS2 | chr7 | 122526053 | - | ENST00000458573 | LMOD2 | chr7 | 123301914 | + | 2376 | 460 | 121 | 1830 | 569 |
ENST00000449022 | CADPS2 | chr7 | 122526053 | - | ENST00000458573 | LMOD2 | chr7 | 123301914 | + | 2275 | 359 | 20 | 1729 | 569 |
ENST00000313070 | CADPS2 | chr7 | 122526052 | - | ENST00000458573 | LMOD2 | chr7 | 123301913 | + | 2677 | 761 | 422 | 2131 | 569 |
ENST00000334010 | CADPS2 | chr7 | 122526052 | - | ENST00000458573 | LMOD2 | chr7 | 123301913 | + | 2677 | 761 | 422 | 2131 | 569 |
ENST00000412584 | CADPS2 | chr7 | 122526052 | - | ENST00000458573 | LMOD2 | chr7 | 123301913 | + | 2376 | 460 | 121 | 1830 | 569 |
ENST00000449022 | CADPS2 | chr7 | 122526052 | - | ENST00000458573 | LMOD2 | chr7 | 123301913 | + | 2275 | 359 | 20 | 1729 | 569 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000313070 | ENST00000458573 | CADPS2 | chr7 | 122526053 | - | LMOD2 | chr7 | 123301914 | + | 0.002812346 | 0.9971877 |
ENST00000334010 | ENST00000458573 | CADPS2 | chr7 | 122526053 | - | LMOD2 | chr7 | 123301914 | + | 0.002812346 | 0.9971877 |
ENST00000412584 | ENST00000458573 | CADPS2 | chr7 | 122526053 | - | LMOD2 | chr7 | 123301914 | + | 0.002236734 | 0.9977633 |
ENST00000449022 | ENST00000458573 | CADPS2 | chr7 | 122526053 | - | LMOD2 | chr7 | 123301914 | + | 0.002095671 | 0.9979043 |
ENST00000313070 | ENST00000458573 | CADPS2 | chr7 | 122526052 | - | LMOD2 | chr7 | 123301913 | + | 0.002812346 | 0.9971877 |
ENST00000334010 | ENST00000458573 | CADPS2 | chr7 | 122526052 | - | LMOD2 | chr7 | 123301913 | + | 0.002812346 | 0.9971877 |
ENST00000412584 | ENST00000458573 | CADPS2 | chr7 | 122526052 | - | LMOD2 | chr7 | 123301913 | + | 0.002236734 | 0.9977633 |
ENST00000449022 | ENST00000458573 | CADPS2 | chr7 | 122526052 | - | LMOD2 | chr7 | 123301913 | + | 0.002095671 | 0.9979043 |
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Fusion Genomic Features for CADPS2-LMOD2 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
CADPS2 | chr7 | 122526052 | - | LMOD2 | chr7 | 123301913 | + | 1.17E-08 | 1 |
CADPS2 | chr7 | 122526052 | - | LMOD2 | chr7 | 123301913 | + | 1.17E-08 | 1 |
CADPS2 | chr7 | 122526052 | - | LMOD2 | chr7 | 123301913 | + | 1.17E-08 | 1 |
CADPS2 | chr7 | 122526052 | - | LMOD2 | chr7 | 123301913 | + | 1.17E-08 | 1 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for CADPS2-LMOD2 |
Go to FGviewer for the breakpoints of chr7:122526053-chr7:123301914 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
CADPS2 | LMOD2 |
FUNCTION: Calcium-binding protein involved in exocytosis of vesicles filled with neurotransmitters and neuropeptides. Probably acts upstream of fusion in the biogenesis or maintenance of mature secretory vesicles. Regulates neurotrophin release from granule cells leading to regulate cell differentiation and survival during cerebellar development. May specifically mediate the Ca(2+)-dependent exocytosis of large dense-core vesicles (DCVs) and other dense-core vesicles (By similarity). {ECO:0000250}. | FUNCTION: Mediates nucleation of actin filaments and thereby promotes actin polymerization (PubMed:18403713, PubMed:26370058, PubMed:25250574, PubMed:26417072). Plays a role in the regulation of actin filament length (By similarity). Required for normal sarcomere organization in the heart, and for normal heart function (PubMed:18403713). {ECO:0000250|UniProtKB:Q3UHZ5, ECO:0000269|PubMed:18403713, ECO:0000269|PubMed:25250574, ECO:0000269|PubMed:26370058, ECO:0000269|PubMed:26417072}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | LMOD2 | chr7:122526052 | chr7:123301913 | ENST00000458573 | 0 | 3 | 113_148 | 91.0 | 548.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | LMOD2 | chr7:122526053 | chr7:123301914 | ENST00000458573 | 0 | 3 | 113_148 | 91.0 | 548.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | LMOD2 | chr7:122526052 | chr7:123301913 | ENST00000458573 | 0 | 3 | 385_450 | 91.0 | 548.0 | Compositional bias | Note=Pro-rich | |
Tgene | LMOD2 | chr7:122526052 | chr7:123301913 | ENST00000458573 | 0 | 3 | 478_487 | 91.0 | 548.0 | Compositional bias | Note=Poly-Lys | |
Tgene | LMOD2 | chr7:122526053 | chr7:123301914 | ENST00000458573 | 0 | 3 | 385_450 | 91.0 | 548.0 | Compositional bias | Note=Pro-rich | |
Tgene | LMOD2 | chr7:122526053 | chr7:123301914 | ENST00000458573 | 0 | 3 | 478_487 | 91.0 | 548.0 | Compositional bias | Note=Poly-Lys |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | CADPS2 | chr7:122526052 | chr7:123301913 | ENST00000412584 | - | 1 | 28 | 350_464 | 113.0 | 1256.0 | Domain | C2 |
Hgene | CADPS2 | chr7:122526052 | chr7:123301913 | ENST00000412584 | - | 1 | 28 | 487_590 | 113.0 | 1256.0 | Domain | PH |
Hgene | CADPS2 | chr7:122526052 | chr7:123301913 | ENST00000412584 | - | 1 | 28 | 885_1056 | 113.0 | 1256.0 | Domain | MHD1 |
Hgene | CADPS2 | chr7:122526052 | chr7:123301913 | ENST00000449022 | - | 1 | 30 | 350_464 | 113.0 | 1297.0 | Domain | C2 |
Hgene | CADPS2 | chr7:122526052 | chr7:123301913 | ENST00000449022 | - | 1 | 30 | 487_590 | 113.0 | 1297.0 | Domain | PH |
Hgene | CADPS2 | chr7:122526052 | chr7:123301913 | ENST00000449022 | - | 1 | 30 | 885_1056 | 113.0 | 1297.0 | Domain | MHD1 |
Hgene | CADPS2 | chr7:122526053 | chr7:123301914 | ENST00000412584 | - | 1 | 28 | 350_464 | 113.0 | 1256.0 | Domain | C2 |
Hgene | CADPS2 | chr7:122526053 | chr7:123301914 | ENST00000412584 | - | 1 | 28 | 487_590 | 113.0 | 1256.0 | Domain | PH |
Hgene | CADPS2 | chr7:122526053 | chr7:123301914 | ENST00000412584 | - | 1 | 28 | 885_1056 | 113.0 | 1256.0 | Domain | MHD1 |
Hgene | CADPS2 | chr7:122526053 | chr7:123301914 | ENST00000449022 | - | 1 | 30 | 350_464 | 113.0 | 1297.0 | Domain | C2 |
Hgene | CADPS2 | chr7:122526053 | chr7:123301914 | ENST00000449022 | - | 1 | 30 | 487_590 | 113.0 | 1297.0 | Domain | PH |
Hgene | CADPS2 | chr7:122526053 | chr7:123301914 | ENST00000449022 | - | 1 | 30 | 885_1056 | 113.0 | 1297.0 | Domain | MHD1 |
Tgene | LMOD2 | chr7:122526052 | chr7:123301913 | ENST00000458573 | 0 | 3 | 16_41 | 91.0 | 548.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | LMOD2 | chr7:122526053 | chr7:123301914 | ENST00000458573 | 0 | 3 | 16_41 | 91.0 | 548.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | LMOD2 | chr7:122526052 | chr7:123301913 | ENST00000458573 | 0 | 3 | 14_142 | 91.0 | 548.0 | Compositional bias | Note=Glu-rich | |
Tgene | LMOD2 | chr7:122526053 | chr7:123301914 | ENST00000458573 | 0 | 3 | 14_142 | 91.0 | 548.0 | Compositional bias | Note=Glu-rich |
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Fusion Gene Sequence for CADPS2-LMOD2 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000313070_ENST00000458573_TCGA-A1-A0SN-01A_CADPS2_chr7_122526053_-_LMOD2_chr7_123301914_length(transcript)=2677nt_BP=761nt ATTCAATTCCACGTGTTGCTTGTTGTAGGCGCCACAGGTTCCCCACCTGCGTCCGGGCGCTCGGGCGGCTCCGCCTCTGCCGGCGGGCTC TGGGGAACCGCTGGGTCGGCGCGCCCGGGGCTGGCGGAGCAATTCCTGAGGCGCCCAAGCTCACCCCCAACGCTAACTCCGCCTATTCAG TCCCGGCGGCTCCCCCTCTCCCCCCTCCCAATCCTCCTCCCGGCTCCTGCCCGCCCCTTTCGCCCTGGTGGTAGGAAACACTCCTGAATC TAACTCGACGTGTCCGGAAAGCCCTGGCCAGTTTTCCTTTCGTTCTGCGGCCGCTGCAGCCAGCCCCGCGGCTCCCTCAGACCCGCGGGC GCAGCCGCCGGGGGTGAGGCGCTTGGGGACCGCGGGCCGAGCGGCGGGGATCCCCGAGCACCATGCTGGACCCGTCTTCCAGCGAAGAGG AGTCGGACGAGGGGCTGGAAGAGGAAAGCCGCGATGTGCTGGTGGCAGCCGGCAGCTCGCAGCGAGCTCCTCCAGCCCCGACTCGGGAAG GGCGGCGGGACGCGCCGGGGCGCGCGGGCGGCGGCGGCGCGGCCAGATCTGTGAGCCCGAGCCCCTCTGTGCTCAGCGAGGGGCGAGACG AGCCCCAGCGGCAGCTGGACGATGAGCAGGAGCGGAGGATCCGCCTGCAGCTCTACGTCTTCGTCGTGAGGTGCATCGCGTACCCCTTCA ACGCCAAGCAGCCCACCGACATGGCCCGGAGGCAGCAGAAGGTTGCAGAAGACAAAGAGGAAAGTGAAGAAGAGCTTATCTTTACTGAAA GTAACAGTGAGGTTTCTGAGGAAGTGTATACAGAGGAGGAGGAGGAGGAGTCCCAGGAGGAAGAGGAGGAAGAAGACAGTGACGAAGAGG AAAGAACAATTGAAACTGCAAAAGGGATTAATGGAACTGTAAATTATGATAGTGTCAATTCTGACAACTCTAAGCCAAAGATATTTAAAA GTCAAATAGAGAACATAAATTTGACCAATGGCAGCAATGGGAGGAACACAGAGTCCCCAGCTGCCATTCACCCTTGTGGAAATCCTACAG TGATTGAGGACGCTTTGGACAAGATTAAAAGCAATGACCCTGACACCACAGAAGTCAATTTGAACAACATTGAGAACATCACAACACAGA CCCTTACCCGCTTTGCTGAAGCCCTCAAGGACAACACTGTGGTGAAGACGTTCAGTCTGGCCAACACGCATGCCGACGACAGTGCAGCCA TGGCCATTGCAGAGATGCTCAAAGTCAATGAGCACATCACCAACGTAAACGTCGAGTCCAACTTCATAACGGGAAAGGGGATCCTGGCCA TCATGAGAGCTCTCCAGCACAACACGGTGCTCACGGAGCTGCGTTTCCATAACCAGAGGCACATCATGGGCAGCCAGGTGGAAATGGAGA TTGTCAAGCTGCTGAAGGAGAACACGACGCTGCTGAGGCTGGGATACCATTTTGAACTCCCAGGACCAAGAATGAGCATGACGAGCATTT TGACAAGAAATATGGATAAACAGAGGCAAAAACGTTTGCAGGAGCAAAAACAGCAGGAGGGATACGATGGAGGACCCAATCTTAGGACCA AAGTCTGGCAAAGAGGAACACCTAGCTCTTCACCTTATGTATCTCCCAGGCACTCACCCTGGTCATCCCCAAAACTCCCCAAAAAAGTCC AGACTGTGAGGAGCCGTCCTCTGTCTCCTGTGGCCACACCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCCCCCTCCTTCTTCCCAAAGGC TGCCACCACCTCCTCCTCCTCCCCCTCCTCCACTCCCAGAGAAAAAGCTCATTACCAGAAACATTGCAGAAGTCATCAAACAACAGGAGA GTGCCCAACGGGCATTACAAAATGGACAAAAAAAGAAAAAAGGGAAAAAGGTCAAGAAACAGCCAAACAGTATTCTAAAGGAAATAAAAA ATTCTCTGAGGTCAGTGCAAGAGAAGAAAATGGAAGACAGTTCCCGACCTTCTACCCCACAGAGATCAGCTCATGAGAATCTCATGGAAG CAATTCGGGGAAGCAGCATAAAACAGCTAAAGCGGGTGGAAGTTCCAGAAGCCCTGCGATAAAAACATGATCTTTAGAAGAGGATGCAGA ACTGTTCAGTGGTATTACATGAAATGCATTGTGAGATGTTTCTAAAATACCTTCTTCAATTCAAAATGATCCCTGACTTTAAAAATAATC TCACCCATTAATTCCAAAGAGAATCTTAAGAAACAATCAGCATGTTTCTTCTGTAAATATGAAAATAAATTTCTTTTTTATGTCGTGAGA TTTGTATTGGCAAGAAGCAGTTAATTTAAAGATGCTCTTCCTATCTGTGGATGTGTTGGTAACTCCGAGTTGTAATGAGTTCATGAAATG TGCTGTTATTTTTGTAATCTCAATAAATGTGGATTGAAGTTTTTTCCCTTTTTTTAAAGCCAAACTAATATTTTTCTGTGACTTGATACA TCTGTCAGATTTTTGTAATCTCGATAAATGTGTATTGAAGTTTTTTCCCTTTTTTTAAAAAGCCAAACTAATATTTTTCTGTGAGTTAAT >In-frame_ENST00000313070_ENST00000458573_TCGA-A1-A0SN-01A_CADPS2_chr7_122526053_-_LMOD2_chr7_123301914_length(amino acids)=569AA_start in transcript=422_stop in transcript=2131 MLDPSSSEEESDEGLEEESRDVLVAAGSSQRAPPAPTREGRRDAPGRAGGGGAARSVSPSPSVLSEGRDEPQRQLDDEQERRIRLQLYVF VVRCIAYPFNAKQPTDMARRQQKVAEDKEESEEELIFTESNSEVSEEVYTEEEEEESQEEEEEEDSDEEERTIETAKGINGTVNYDSVNS DNSKPKIFKSQIENINLTNGSNGRNTESPAAIHPCGNPTVIEDALDKIKSNDPDTTEVNLNNIENITTQTLTRFAEALKDNTVVKTFSLA NTHADDSAAMAIAEMLKVNEHITNVNVESNFITGKGILAIMRALQHNTVLTELRFHNQRHIMGSQVEMEIVKLLKENTTLLRLGYHFELP GPRMSMTSILTRNMDKQRQKRLQEQKQQEGYDGGPNLRTKVWQRGTPSSSPYVSPRHSPWSSPKLPKKVQTVRSRPLSPVATPPPPPPPP PPPPPSSQRLPPPPPPPPPPLPEKKLITRNIAEVIKQQESAQRALQNGQKKKKGKKVKKQPNSILKEIKNSLRSVQEKKMEDSSRPSTPQ -------------------------------------------------------------- >In-frame_ENST00000334010_ENST00000458573_TCGA-A1-A0SN-01A_CADPS2_chr7_122526053_-_LMOD2_chr7_123301914_length(transcript)=2677nt_BP=761nt ATTCAATTCCACGTGTTGCTTGTTGTAGGCGCCACAGGTTCCCCACCTGCGTCCGGGCGCTCGGGCGGCTCCGCCTCTGCCGGCGGGCTC TGGGGAACCGCTGGGTCGGCGCGCCCGGGGCTGGCGGAGCAATTCCTGAGGCGCCCAAGCTCACCCCCAACGCTAACTCCGCCTATTCAG TCCCGGCGGCTCCCCCTCTCCCCCCTCCCAATCCTCCTCCCGGCTCCTGCCCGCCCCTTTCGCCCTGGTGGTAGGAAACACTCCTGAATC TAACTCGACGTGTCCGGAAAGCCCTGGCCAGTTTTCCTTTCGTTCTGCGGCCGCTGCAGCCAGCCCCGCGGCTCCCTCAGACCCGCGGGC GCAGCCGCCGGGGGTGAGGCGCTTGGGGACCGCGGGCCGAGCGGCGGGGATCCCCGAGCACCATGCTGGACCCGTCTTCCAGCGAAGAGG AGTCGGACGAGGGGCTGGAAGAGGAAAGCCGCGATGTGCTGGTGGCAGCCGGCAGCTCGCAGCGAGCTCCTCCAGCCCCGACTCGGGAAG GGCGGCGGGACGCGCCGGGGCGCGCGGGCGGCGGCGGCGCGGCCAGATCTGTGAGCCCGAGCCCCTCTGTGCTCAGCGAGGGGCGAGACG AGCCCCAGCGGCAGCTGGACGATGAGCAGGAGCGGAGGATCCGCCTGCAGCTCTACGTCTTCGTCGTGAGGTGCATCGCGTACCCCTTCA ACGCCAAGCAGCCCACCGACATGGCCCGGAGGCAGCAGAAGGTTGCAGAAGACAAAGAGGAAAGTGAAGAAGAGCTTATCTTTACTGAAA GTAACAGTGAGGTTTCTGAGGAAGTGTATACAGAGGAGGAGGAGGAGGAGTCCCAGGAGGAAGAGGAGGAAGAAGACAGTGACGAAGAGG AAAGAACAATTGAAACTGCAAAAGGGATTAATGGAACTGTAAATTATGATAGTGTCAATTCTGACAACTCTAAGCCAAAGATATTTAAAA GTCAAATAGAGAACATAAATTTGACCAATGGCAGCAATGGGAGGAACACAGAGTCCCCAGCTGCCATTCACCCTTGTGGAAATCCTACAG TGATTGAGGACGCTTTGGACAAGATTAAAAGCAATGACCCTGACACCACAGAAGTCAATTTGAACAACATTGAGAACATCACAACACAGA CCCTTACCCGCTTTGCTGAAGCCCTCAAGGACAACACTGTGGTGAAGACGTTCAGTCTGGCCAACACGCATGCCGACGACAGTGCAGCCA TGGCCATTGCAGAGATGCTCAAAGTCAATGAGCACATCACCAACGTAAACGTCGAGTCCAACTTCATAACGGGAAAGGGGATCCTGGCCA TCATGAGAGCTCTCCAGCACAACACGGTGCTCACGGAGCTGCGTTTCCATAACCAGAGGCACATCATGGGCAGCCAGGTGGAAATGGAGA TTGTCAAGCTGCTGAAGGAGAACACGACGCTGCTGAGGCTGGGATACCATTTTGAACTCCCAGGACCAAGAATGAGCATGACGAGCATTT TGACAAGAAATATGGATAAACAGAGGCAAAAACGTTTGCAGGAGCAAAAACAGCAGGAGGGATACGATGGAGGACCCAATCTTAGGACCA AAGTCTGGCAAAGAGGAACACCTAGCTCTTCACCTTATGTATCTCCCAGGCACTCACCCTGGTCATCCCCAAAACTCCCCAAAAAAGTCC AGACTGTGAGGAGCCGTCCTCTGTCTCCTGTGGCCACACCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCCCCCTCCTTCTTCCCAAAGGC TGCCACCACCTCCTCCTCCTCCCCCTCCTCCACTCCCAGAGAAAAAGCTCATTACCAGAAACATTGCAGAAGTCATCAAACAACAGGAGA GTGCCCAACGGGCATTACAAAATGGACAAAAAAAGAAAAAAGGGAAAAAGGTCAAGAAACAGCCAAACAGTATTCTAAAGGAAATAAAAA ATTCTCTGAGGTCAGTGCAAGAGAAGAAAATGGAAGACAGTTCCCGACCTTCTACCCCACAGAGATCAGCTCATGAGAATCTCATGGAAG CAATTCGGGGAAGCAGCATAAAACAGCTAAAGCGGGTGGAAGTTCCAGAAGCCCTGCGATAAAAACATGATCTTTAGAAGAGGATGCAGA ACTGTTCAGTGGTATTACATGAAATGCATTGTGAGATGTTTCTAAAATACCTTCTTCAATTCAAAATGATCCCTGACTTTAAAAATAATC TCACCCATTAATTCCAAAGAGAATCTTAAGAAACAATCAGCATGTTTCTTCTGTAAATATGAAAATAAATTTCTTTTTTATGTCGTGAGA TTTGTATTGGCAAGAAGCAGTTAATTTAAAGATGCTCTTCCTATCTGTGGATGTGTTGGTAACTCCGAGTTGTAATGAGTTCATGAAATG TGCTGTTATTTTTGTAATCTCAATAAATGTGGATTGAAGTTTTTTCCCTTTTTTTAAAGCCAAACTAATATTTTTCTGTGACTTGATACA TCTGTCAGATTTTTGTAATCTCGATAAATGTGTATTGAAGTTTTTTCCCTTTTTTTAAAAAGCCAAACTAATATTTTTCTGTGAGTTAAT >In-frame_ENST00000334010_ENST00000458573_TCGA-A1-A0SN-01A_CADPS2_chr7_122526053_-_LMOD2_chr7_123301914_length(amino acids)=569AA_start in transcript=422_stop in transcript=2131 MLDPSSSEEESDEGLEEESRDVLVAAGSSQRAPPAPTREGRRDAPGRAGGGGAARSVSPSPSVLSEGRDEPQRQLDDEQERRIRLQLYVF VVRCIAYPFNAKQPTDMARRQQKVAEDKEESEEELIFTESNSEVSEEVYTEEEEEESQEEEEEEDSDEEERTIETAKGINGTVNYDSVNS DNSKPKIFKSQIENINLTNGSNGRNTESPAAIHPCGNPTVIEDALDKIKSNDPDTTEVNLNNIENITTQTLTRFAEALKDNTVVKTFSLA NTHADDSAAMAIAEMLKVNEHITNVNVESNFITGKGILAIMRALQHNTVLTELRFHNQRHIMGSQVEMEIVKLLKENTTLLRLGYHFELP GPRMSMTSILTRNMDKQRQKRLQEQKQQEGYDGGPNLRTKVWQRGTPSSSPYVSPRHSPWSSPKLPKKVQTVRSRPLSPVATPPPPPPPP PPPPPSSQRLPPPPPPPPPPLPEKKLITRNIAEVIKQQESAQRALQNGQKKKKGKKVKKQPNSILKEIKNSLRSVQEKKMEDSSRPSTPQ -------------------------------------------------------------- >In-frame_ENST00000412584_ENST00000458573_TCGA-A1-A0SN-01A_CADPS2_chr7_122526053_-_LMOD2_chr7_123301914_length(transcript)=2376nt_BP=460nt TTTTCCTTTCGTTCTGCGGCCGCTGCAGCCAGCCCCGCGGCTCCCTCAGACCCGCGGGCGCAGCCGCCGGGGGTGAGGCGCTTGGGGACC GCGGGCCGAGCGGCGGGGATCCCCGAGCACCATGCTGGACCCGTCTTCCAGCGAAGAGGAGTCGGACGAGGGGCTGGAAGAGGAAAGCCG CGATGTGCTGGTGGCAGCCGGCAGCTCGCAGCGAGCTCCTCCAGCCCCGACTCGGGAAGGGCGGCGGGACGCGCCGGGGCGCGCGGGCGG CGGCGGCGCGGCCAGATCTGTGAGCCCGAGCCCCTCTGTGCTCAGCGAGGGGCGAGACGAGCCCCAGCGGCAGCTGGACGATGAGCAGGA GCGGAGGATCCGCCTGCAGCTCTACGTCTTCGTCGTGAGGTGCATCGCGTACCCCTTCAACGCCAAGCAGCCCACCGACATGGCCCGGAG GCAGCAGAAGGTTGCAGAAGACAAAGAGGAAAGTGAAGAAGAGCTTATCTTTACTGAAAGTAACAGTGAGGTTTCTGAGGAAGTGTATAC AGAGGAGGAGGAGGAGGAGTCCCAGGAGGAAGAGGAGGAAGAAGACAGTGACGAAGAGGAAAGAACAATTGAAACTGCAAAAGGGATTAA TGGAACTGTAAATTATGATAGTGTCAATTCTGACAACTCTAAGCCAAAGATATTTAAAAGTCAAATAGAGAACATAAATTTGACCAATGG CAGCAATGGGAGGAACACAGAGTCCCCAGCTGCCATTCACCCTTGTGGAAATCCTACAGTGATTGAGGACGCTTTGGACAAGATTAAAAG CAATGACCCTGACACCACAGAAGTCAATTTGAACAACATTGAGAACATCACAACACAGACCCTTACCCGCTTTGCTGAAGCCCTCAAGGA CAACACTGTGGTGAAGACGTTCAGTCTGGCCAACACGCATGCCGACGACAGTGCAGCCATGGCCATTGCAGAGATGCTCAAAGTCAATGA GCACATCACCAACGTAAACGTCGAGTCCAACTTCATAACGGGAAAGGGGATCCTGGCCATCATGAGAGCTCTCCAGCACAACACGGTGCT CACGGAGCTGCGTTTCCATAACCAGAGGCACATCATGGGCAGCCAGGTGGAAATGGAGATTGTCAAGCTGCTGAAGGAGAACACGACGCT GCTGAGGCTGGGATACCATTTTGAACTCCCAGGACCAAGAATGAGCATGACGAGCATTTTGACAAGAAATATGGATAAACAGAGGCAAAA ACGTTTGCAGGAGCAAAAACAGCAGGAGGGATACGATGGAGGACCCAATCTTAGGACCAAAGTCTGGCAAAGAGGAACACCTAGCTCTTC ACCTTATGTATCTCCCAGGCACTCACCCTGGTCATCCCCAAAACTCCCCAAAAAAGTCCAGACTGTGAGGAGCCGTCCTCTGTCTCCTGT GGCCACACCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCCCCCTCCTTCTTCCCAAAGGCTGCCACCACCTCCTCCTCCTCCCCCTCCTCC ACTCCCAGAGAAAAAGCTCATTACCAGAAACATTGCAGAAGTCATCAAACAACAGGAGAGTGCCCAACGGGCATTACAAAATGGACAAAA AAAGAAAAAAGGGAAAAAGGTCAAGAAACAGCCAAACAGTATTCTAAAGGAAATAAAAAATTCTCTGAGGTCAGTGCAAGAGAAGAAAAT GGAAGACAGTTCCCGACCTTCTACCCCACAGAGATCAGCTCATGAGAATCTCATGGAAGCAATTCGGGGAAGCAGCATAAAACAGCTAAA GCGGGTGGAAGTTCCAGAAGCCCTGCGATAAAAACATGATCTTTAGAAGAGGATGCAGAACTGTTCAGTGGTATTACATGAAATGCATTG TGAGATGTTTCTAAAATACCTTCTTCAATTCAAAATGATCCCTGACTTTAAAAATAATCTCACCCATTAATTCCAAAGAGAATCTTAAGA AACAATCAGCATGTTTCTTCTGTAAATATGAAAATAAATTTCTTTTTTATGTCGTGAGATTTGTATTGGCAAGAAGCAGTTAATTTAAAG ATGCTCTTCCTATCTGTGGATGTGTTGGTAACTCCGAGTTGTAATGAGTTCATGAAATGTGCTGTTATTTTTGTAATCTCAATAAATGTG GATTGAAGTTTTTTCCCTTTTTTTAAAGCCAAACTAATATTTTTCTGTGACTTGATACATCTGTCAGATTTTTGTAATCTCGATAAATGT GTATTGAAGTTTTTTCCCTTTTTTTAAAAAGCCAAACTAATATTTTTCTGTGAGTTAATACATCTGTCAGGTGTGTATGTAACATTACTG >In-frame_ENST00000412584_ENST00000458573_TCGA-A1-A0SN-01A_CADPS2_chr7_122526053_-_LMOD2_chr7_123301914_length(amino acids)=569AA_start in transcript=121_stop in transcript=1830 MLDPSSSEEESDEGLEEESRDVLVAAGSSQRAPPAPTREGRRDAPGRAGGGGAARSVSPSPSVLSEGRDEPQRQLDDEQERRIRLQLYVF VVRCIAYPFNAKQPTDMARRQQKVAEDKEESEEELIFTESNSEVSEEVYTEEEEEESQEEEEEEDSDEEERTIETAKGINGTVNYDSVNS DNSKPKIFKSQIENINLTNGSNGRNTESPAAIHPCGNPTVIEDALDKIKSNDPDTTEVNLNNIENITTQTLTRFAEALKDNTVVKTFSLA NTHADDSAAMAIAEMLKVNEHITNVNVESNFITGKGILAIMRALQHNTVLTELRFHNQRHIMGSQVEMEIVKLLKENTTLLRLGYHFELP GPRMSMTSILTRNMDKQRQKRLQEQKQQEGYDGGPNLRTKVWQRGTPSSSPYVSPRHSPWSSPKLPKKVQTVRSRPLSPVATPPPPPPPP PPPPPSSQRLPPPPPPPPPPLPEKKLITRNIAEVIKQQESAQRALQNGQKKKKGKKVKKQPNSILKEIKNSLRSVQEKKMEDSSRPSTPQ -------------------------------------------------------------- >In-frame_ENST00000449022_ENST00000458573_TCGA-A1-A0SN-01A_CADPS2_chr7_122526053_-_LMOD2_chr7_123301914_length(transcript)=2275nt_BP=359nt GGCGGGGATCCCCGAGCACCATGCTGGACCCGTCTTCCAGCGAAGAGGAGTCGGACGAGGGGCTGGAAGAGGAAAGCCGCGATGTGCTGG TGGCAGCCGGCAGCTCGCAGCGAGCTCCTCCAGCCCCGACTCGGGAAGGGCGGCGGGACGCGCCGGGGCGCGCGGGCGGCGGCGGCGCGG CCAGATCTGTGAGCCCGAGCCCCTCTGTGCTCAGCGAGGGGCGAGACGAGCCCCAGCGGCAGCTGGACGATGAGCAGGAGCGGAGGATCC GCCTGCAGCTCTACGTCTTCGTCGTGAGGTGCATCGCGTACCCCTTCAACGCCAAGCAGCCCACCGACATGGCCCGGAGGCAGCAGAAGG TTGCAGAAGACAAAGAGGAAAGTGAAGAAGAGCTTATCTTTACTGAAAGTAACAGTGAGGTTTCTGAGGAAGTGTATACAGAGGAGGAGG AGGAGGAGTCCCAGGAGGAAGAGGAGGAAGAAGACAGTGACGAAGAGGAAAGAACAATTGAAACTGCAAAAGGGATTAATGGAACTGTAA ATTATGATAGTGTCAATTCTGACAACTCTAAGCCAAAGATATTTAAAAGTCAAATAGAGAACATAAATTTGACCAATGGCAGCAATGGGA GGAACACAGAGTCCCCAGCTGCCATTCACCCTTGTGGAAATCCTACAGTGATTGAGGACGCTTTGGACAAGATTAAAAGCAATGACCCTG ACACCACAGAAGTCAATTTGAACAACATTGAGAACATCACAACACAGACCCTTACCCGCTTTGCTGAAGCCCTCAAGGACAACACTGTGG TGAAGACGTTCAGTCTGGCCAACACGCATGCCGACGACAGTGCAGCCATGGCCATTGCAGAGATGCTCAAAGTCAATGAGCACATCACCA ACGTAAACGTCGAGTCCAACTTCATAACGGGAAAGGGGATCCTGGCCATCATGAGAGCTCTCCAGCACAACACGGTGCTCACGGAGCTGC GTTTCCATAACCAGAGGCACATCATGGGCAGCCAGGTGGAAATGGAGATTGTCAAGCTGCTGAAGGAGAACACGACGCTGCTGAGGCTGG GATACCATTTTGAACTCCCAGGACCAAGAATGAGCATGACGAGCATTTTGACAAGAAATATGGATAAACAGAGGCAAAAACGTTTGCAGG AGCAAAAACAGCAGGAGGGATACGATGGAGGACCCAATCTTAGGACCAAAGTCTGGCAAAGAGGAACACCTAGCTCTTCACCTTATGTAT CTCCCAGGCACTCACCCTGGTCATCCCCAAAACTCCCCAAAAAAGTCCAGACTGTGAGGAGCCGTCCTCTGTCTCCTGTGGCCACACCTC CTCCTCCTCCCCCTCCTCCTCCTCCTCCCCCTCCTTCTTCCCAAAGGCTGCCACCACCTCCTCCTCCTCCCCCTCCTCCACTCCCAGAGA AAAAGCTCATTACCAGAAACATTGCAGAAGTCATCAAACAACAGGAGAGTGCCCAACGGGCATTACAAAATGGACAAAAAAAGAAAAAAG GGAAAAAGGTCAAGAAACAGCCAAACAGTATTCTAAAGGAAATAAAAAATTCTCTGAGGTCAGTGCAAGAGAAGAAAATGGAAGACAGTT CCCGACCTTCTACCCCACAGAGATCAGCTCATGAGAATCTCATGGAAGCAATTCGGGGAAGCAGCATAAAACAGCTAAAGCGGGTGGAAG TTCCAGAAGCCCTGCGATAAAAACATGATCTTTAGAAGAGGATGCAGAACTGTTCAGTGGTATTACATGAAATGCATTGTGAGATGTTTC TAAAATACCTTCTTCAATTCAAAATGATCCCTGACTTTAAAAATAATCTCACCCATTAATTCCAAAGAGAATCTTAAGAAACAATCAGCA TGTTTCTTCTGTAAATATGAAAATAAATTTCTTTTTTATGTCGTGAGATTTGTATTGGCAAGAAGCAGTTAATTTAAAGATGCTCTTCCT ATCTGTGGATGTGTTGGTAACTCCGAGTTGTAATGAGTTCATGAAATGTGCTGTTATTTTTGTAATCTCAATAAATGTGGATTGAAGTTT TTTCCCTTTTTTTAAAGCCAAACTAATATTTTTCTGTGACTTGATACATCTGTCAGATTTTTGTAATCTCGATAAATGTGTATTGAAGTT TTTTCCCTTTTTTTAAAAAGCCAAACTAATATTTTTCTGTGAGTTAATACATCTGTCAGGTGTGTATGTAACATTACTGGACATTAAAAA >In-frame_ENST00000449022_ENST00000458573_TCGA-A1-A0SN-01A_CADPS2_chr7_122526053_-_LMOD2_chr7_123301914_length(amino acids)=569AA_start in transcript=20_stop in transcript=1729 MLDPSSSEEESDEGLEEESRDVLVAAGSSQRAPPAPTREGRRDAPGRAGGGGAARSVSPSPSVLSEGRDEPQRQLDDEQERRIRLQLYVF VVRCIAYPFNAKQPTDMARRQQKVAEDKEESEEELIFTESNSEVSEEVYTEEEEEESQEEEEEEDSDEEERTIETAKGINGTVNYDSVNS DNSKPKIFKSQIENINLTNGSNGRNTESPAAIHPCGNPTVIEDALDKIKSNDPDTTEVNLNNIENITTQTLTRFAEALKDNTVVKTFSLA NTHADDSAAMAIAEMLKVNEHITNVNVESNFITGKGILAIMRALQHNTVLTELRFHNQRHIMGSQVEMEIVKLLKENTTLLRLGYHFELP GPRMSMTSILTRNMDKQRQKRLQEQKQQEGYDGGPNLRTKVWQRGTPSSSPYVSPRHSPWSSPKLPKKVQTVRSRPLSPVATPPPPPPPP PPPPPSSQRLPPPPPPPPPPLPEKKLITRNIAEVIKQQESAQRALQNGQKKKKGKKVKKQPNSILKEIKNSLRSVQEKKMEDSSRPSTPQ -------------------------------------------------------------- >In-frame_ENST00000313070_ENST00000458573_TCGA-A1-A0SN_CADPS2_chr7_122526052_-_LMOD2_chr7_123301913_length(transcript)=2677nt_BP=761nt ATTCAATTCCACGTGTTGCTTGTTGTAGGCGCCACAGGTTCCCCACCTGCGTCCGGGCGCTCGGGCGGCTCCGCCTCTGCCGGCGGGCTC TGGGGAACCGCTGGGTCGGCGCGCCCGGGGCTGGCGGAGCAATTCCTGAGGCGCCCAAGCTCACCCCCAACGCTAACTCCGCCTATTCAG TCCCGGCGGCTCCCCCTCTCCCCCCTCCCAATCCTCCTCCCGGCTCCTGCCCGCCCCTTTCGCCCTGGTGGTAGGAAACACTCCTGAATC TAACTCGACGTGTCCGGAAAGCCCTGGCCAGTTTTCCTTTCGTTCTGCGGCCGCTGCAGCCAGCCCCGCGGCTCCCTCAGACCCGCGGGC GCAGCCGCCGGGGGTGAGGCGCTTGGGGACCGCGGGCCGAGCGGCGGGGATCCCCGAGCACCATGCTGGACCCGTCTTCCAGCGAAGAGG AGTCGGACGAGGGGCTGGAAGAGGAAAGCCGCGATGTGCTGGTGGCAGCCGGCAGCTCGCAGCGAGCTCCTCCAGCCCCGACTCGGGAAG GGCGGCGGGACGCGCCGGGGCGCGCGGGCGGCGGCGGCGCGGCCAGATCTGTGAGCCCGAGCCCCTCTGTGCTCAGCGAGGGGCGAGACG AGCCCCAGCGGCAGCTGGACGATGAGCAGGAGCGGAGGATCCGCCTGCAGCTCTACGTCTTCGTCGTGAGGTGCATCGCGTACCCCTTCA ACGCCAAGCAGCCCACCGACATGGCCCGGAGGCAGCAGAAGGTTGCAGAAGACAAAGAGGAAAGTGAAGAAGAGCTTATCTTTACTGAAA GTAACAGTGAGGTTTCTGAGGAAGTGTATACAGAGGAGGAGGAGGAGGAGTCCCAGGAGGAAGAGGAGGAAGAAGACAGTGACGAAGAGG AAAGAACAATTGAAACTGCAAAAGGGATTAATGGAACTGTAAATTATGATAGTGTCAATTCTGACAACTCTAAGCCAAAGATATTTAAAA GTCAAATAGAGAACATAAATTTGACCAATGGCAGCAATGGGAGGAACACAGAGTCCCCAGCTGCCATTCACCCTTGTGGAAATCCTACAG TGATTGAGGACGCTTTGGACAAGATTAAAAGCAATGACCCTGACACCACAGAAGTCAATTTGAACAACATTGAGAACATCACAACACAGA CCCTTACCCGCTTTGCTGAAGCCCTCAAGGACAACACTGTGGTGAAGACGTTCAGTCTGGCCAACACGCATGCCGACGACAGTGCAGCCA TGGCCATTGCAGAGATGCTCAAAGTCAATGAGCACATCACCAACGTAAACGTCGAGTCCAACTTCATAACGGGAAAGGGGATCCTGGCCA TCATGAGAGCTCTCCAGCACAACACGGTGCTCACGGAGCTGCGTTTCCATAACCAGAGGCACATCATGGGCAGCCAGGTGGAAATGGAGA TTGTCAAGCTGCTGAAGGAGAACACGACGCTGCTGAGGCTGGGATACCATTTTGAACTCCCAGGACCAAGAATGAGCATGACGAGCATTT TGACAAGAAATATGGATAAACAGAGGCAAAAACGTTTGCAGGAGCAAAAACAGCAGGAGGGATACGATGGAGGACCCAATCTTAGGACCA AAGTCTGGCAAAGAGGAACACCTAGCTCTTCACCTTATGTATCTCCCAGGCACTCACCCTGGTCATCCCCAAAACTCCCCAAAAAAGTCC AGACTGTGAGGAGCCGTCCTCTGTCTCCTGTGGCCACACCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCCCCCTCCTTCTTCCCAAAGGC TGCCACCACCTCCTCCTCCTCCCCCTCCTCCACTCCCAGAGAAAAAGCTCATTACCAGAAACATTGCAGAAGTCATCAAACAACAGGAGA GTGCCCAACGGGCATTACAAAATGGACAAAAAAAGAAAAAAGGGAAAAAGGTCAAGAAACAGCCAAACAGTATTCTAAAGGAAATAAAAA ATTCTCTGAGGTCAGTGCAAGAGAAGAAAATGGAAGACAGTTCCCGACCTTCTACCCCACAGAGATCAGCTCATGAGAATCTCATGGAAG CAATTCGGGGAAGCAGCATAAAACAGCTAAAGCGGGTGGAAGTTCCAGAAGCCCTGCGATAAAAACATGATCTTTAGAAGAGGATGCAGA ACTGTTCAGTGGTATTACATGAAATGCATTGTGAGATGTTTCTAAAATACCTTCTTCAATTCAAAATGATCCCTGACTTTAAAAATAATC TCACCCATTAATTCCAAAGAGAATCTTAAGAAACAATCAGCATGTTTCTTCTGTAAATATGAAAATAAATTTCTTTTTTATGTCGTGAGA TTTGTATTGGCAAGAAGCAGTTAATTTAAAGATGCTCTTCCTATCTGTGGATGTGTTGGTAACTCCGAGTTGTAATGAGTTCATGAAATG TGCTGTTATTTTTGTAATCTCAATAAATGTGGATTGAAGTTTTTTCCCTTTTTTTAAAGCCAAACTAATATTTTTCTGTGACTTGATACA TCTGTCAGATTTTTGTAATCTCGATAAATGTGTATTGAAGTTTTTTCCCTTTTTTTAAAAAGCCAAACTAATATTTTTCTGTGAGTTAAT >In-frame_ENST00000313070_ENST00000458573_TCGA-A1-A0SN_CADPS2_chr7_122526052_-_LMOD2_chr7_123301913_length(amino acids)=569AA_start in transcript=422_stop in transcript=2131 MLDPSSSEEESDEGLEEESRDVLVAAGSSQRAPPAPTREGRRDAPGRAGGGGAARSVSPSPSVLSEGRDEPQRQLDDEQERRIRLQLYVF VVRCIAYPFNAKQPTDMARRQQKVAEDKEESEEELIFTESNSEVSEEVYTEEEEEESQEEEEEEDSDEEERTIETAKGINGTVNYDSVNS DNSKPKIFKSQIENINLTNGSNGRNTESPAAIHPCGNPTVIEDALDKIKSNDPDTTEVNLNNIENITTQTLTRFAEALKDNTVVKTFSLA NTHADDSAAMAIAEMLKVNEHITNVNVESNFITGKGILAIMRALQHNTVLTELRFHNQRHIMGSQVEMEIVKLLKENTTLLRLGYHFELP GPRMSMTSILTRNMDKQRQKRLQEQKQQEGYDGGPNLRTKVWQRGTPSSSPYVSPRHSPWSSPKLPKKVQTVRSRPLSPVATPPPPPPPP PPPPPSSQRLPPPPPPPPPPLPEKKLITRNIAEVIKQQESAQRALQNGQKKKKGKKVKKQPNSILKEIKNSLRSVQEKKMEDSSRPSTPQ -------------------------------------------------------------- >In-frame_ENST00000334010_ENST00000458573_TCGA-A1-A0SN_CADPS2_chr7_122526052_-_LMOD2_chr7_123301913_length(transcript)=2677nt_BP=761nt ATTCAATTCCACGTGTTGCTTGTTGTAGGCGCCACAGGTTCCCCACCTGCGTCCGGGCGCTCGGGCGGCTCCGCCTCTGCCGGCGGGCTC TGGGGAACCGCTGGGTCGGCGCGCCCGGGGCTGGCGGAGCAATTCCTGAGGCGCCCAAGCTCACCCCCAACGCTAACTCCGCCTATTCAG TCCCGGCGGCTCCCCCTCTCCCCCCTCCCAATCCTCCTCCCGGCTCCTGCCCGCCCCTTTCGCCCTGGTGGTAGGAAACACTCCTGAATC TAACTCGACGTGTCCGGAAAGCCCTGGCCAGTTTTCCTTTCGTTCTGCGGCCGCTGCAGCCAGCCCCGCGGCTCCCTCAGACCCGCGGGC GCAGCCGCCGGGGGTGAGGCGCTTGGGGACCGCGGGCCGAGCGGCGGGGATCCCCGAGCACCATGCTGGACCCGTCTTCCAGCGAAGAGG AGTCGGACGAGGGGCTGGAAGAGGAAAGCCGCGATGTGCTGGTGGCAGCCGGCAGCTCGCAGCGAGCTCCTCCAGCCCCGACTCGGGAAG GGCGGCGGGACGCGCCGGGGCGCGCGGGCGGCGGCGGCGCGGCCAGATCTGTGAGCCCGAGCCCCTCTGTGCTCAGCGAGGGGCGAGACG AGCCCCAGCGGCAGCTGGACGATGAGCAGGAGCGGAGGATCCGCCTGCAGCTCTACGTCTTCGTCGTGAGGTGCATCGCGTACCCCTTCA ACGCCAAGCAGCCCACCGACATGGCCCGGAGGCAGCAGAAGGTTGCAGAAGACAAAGAGGAAAGTGAAGAAGAGCTTATCTTTACTGAAA GTAACAGTGAGGTTTCTGAGGAAGTGTATACAGAGGAGGAGGAGGAGGAGTCCCAGGAGGAAGAGGAGGAAGAAGACAGTGACGAAGAGG AAAGAACAATTGAAACTGCAAAAGGGATTAATGGAACTGTAAATTATGATAGTGTCAATTCTGACAACTCTAAGCCAAAGATATTTAAAA GTCAAATAGAGAACATAAATTTGACCAATGGCAGCAATGGGAGGAACACAGAGTCCCCAGCTGCCATTCACCCTTGTGGAAATCCTACAG TGATTGAGGACGCTTTGGACAAGATTAAAAGCAATGACCCTGACACCACAGAAGTCAATTTGAACAACATTGAGAACATCACAACACAGA CCCTTACCCGCTTTGCTGAAGCCCTCAAGGACAACACTGTGGTGAAGACGTTCAGTCTGGCCAACACGCATGCCGACGACAGTGCAGCCA TGGCCATTGCAGAGATGCTCAAAGTCAATGAGCACATCACCAACGTAAACGTCGAGTCCAACTTCATAACGGGAAAGGGGATCCTGGCCA TCATGAGAGCTCTCCAGCACAACACGGTGCTCACGGAGCTGCGTTTCCATAACCAGAGGCACATCATGGGCAGCCAGGTGGAAATGGAGA TTGTCAAGCTGCTGAAGGAGAACACGACGCTGCTGAGGCTGGGATACCATTTTGAACTCCCAGGACCAAGAATGAGCATGACGAGCATTT TGACAAGAAATATGGATAAACAGAGGCAAAAACGTTTGCAGGAGCAAAAACAGCAGGAGGGATACGATGGAGGACCCAATCTTAGGACCA AAGTCTGGCAAAGAGGAACACCTAGCTCTTCACCTTATGTATCTCCCAGGCACTCACCCTGGTCATCCCCAAAACTCCCCAAAAAAGTCC AGACTGTGAGGAGCCGTCCTCTGTCTCCTGTGGCCACACCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCCCCCTCCTTCTTCCCAAAGGC TGCCACCACCTCCTCCTCCTCCCCCTCCTCCACTCCCAGAGAAAAAGCTCATTACCAGAAACATTGCAGAAGTCATCAAACAACAGGAGA GTGCCCAACGGGCATTACAAAATGGACAAAAAAAGAAAAAAGGGAAAAAGGTCAAGAAACAGCCAAACAGTATTCTAAAGGAAATAAAAA ATTCTCTGAGGTCAGTGCAAGAGAAGAAAATGGAAGACAGTTCCCGACCTTCTACCCCACAGAGATCAGCTCATGAGAATCTCATGGAAG CAATTCGGGGAAGCAGCATAAAACAGCTAAAGCGGGTGGAAGTTCCAGAAGCCCTGCGATAAAAACATGATCTTTAGAAGAGGATGCAGA ACTGTTCAGTGGTATTACATGAAATGCATTGTGAGATGTTTCTAAAATACCTTCTTCAATTCAAAATGATCCCTGACTTTAAAAATAATC TCACCCATTAATTCCAAAGAGAATCTTAAGAAACAATCAGCATGTTTCTTCTGTAAATATGAAAATAAATTTCTTTTTTATGTCGTGAGA TTTGTATTGGCAAGAAGCAGTTAATTTAAAGATGCTCTTCCTATCTGTGGATGTGTTGGTAACTCCGAGTTGTAATGAGTTCATGAAATG TGCTGTTATTTTTGTAATCTCAATAAATGTGGATTGAAGTTTTTTCCCTTTTTTTAAAGCCAAACTAATATTTTTCTGTGACTTGATACA TCTGTCAGATTTTTGTAATCTCGATAAATGTGTATTGAAGTTTTTTCCCTTTTTTTAAAAAGCCAAACTAATATTTTTCTGTGAGTTAAT >In-frame_ENST00000334010_ENST00000458573_TCGA-A1-A0SN_CADPS2_chr7_122526052_-_LMOD2_chr7_123301913_length(amino acids)=569AA_start in transcript=422_stop in transcript=2131 MLDPSSSEEESDEGLEEESRDVLVAAGSSQRAPPAPTREGRRDAPGRAGGGGAARSVSPSPSVLSEGRDEPQRQLDDEQERRIRLQLYVF VVRCIAYPFNAKQPTDMARRQQKVAEDKEESEEELIFTESNSEVSEEVYTEEEEEESQEEEEEEDSDEEERTIETAKGINGTVNYDSVNS DNSKPKIFKSQIENINLTNGSNGRNTESPAAIHPCGNPTVIEDALDKIKSNDPDTTEVNLNNIENITTQTLTRFAEALKDNTVVKTFSLA NTHADDSAAMAIAEMLKVNEHITNVNVESNFITGKGILAIMRALQHNTVLTELRFHNQRHIMGSQVEMEIVKLLKENTTLLRLGYHFELP GPRMSMTSILTRNMDKQRQKRLQEQKQQEGYDGGPNLRTKVWQRGTPSSSPYVSPRHSPWSSPKLPKKVQTVRSRPLSPVATPPPPPPPP PPPPPSSQRLPPPPPPPPPPLPEKKLITRNIAEVIKQQESAQRALQNGQKKKKGKKVKKQPNSILKEIKNSLRSVQEKKMEDSSRPSTPQ -------------------------------------------------------------- >In-frame_ENST00000412584_ENST00000458573_TCGA-A1-A0SN_CADPS2_chr7_122526052_-_LMOD2_chr7_123301913_length(transcript)=2376nt_BP=460nt TTTTCCTTTCGTTCTGCGGCCGCTGCAGCCAGCCCCGCGGCTCCCTCAGACCCGCGGGCGCAGCCGCCGGGGGTGAGGCGCTTGGGGACC GCGGGCCGAGCGGCGGGGATCCCCGAGCACCATGCTGGACCCGTCTTCCAGCGAAGAGGAGTCGGACGAGGGGCTGGAAGAGGAAAGCCG CGATGTGCTGGTGGCAGCCGGCAGCTCGCAGCGAGCTCCTCCAGCCCCGACTCGGGAAGGGCGGCGGGACGCGCCGGGGCGCGCGGGCGG CGGCGGCGCGGCCAGATCTGTGAGCCCGAGCCCCTCTGTGCTCAGCGAGGGGCGAGACGAGCCCCAGCGGCAGCTGGACGATGAGCAGGA GCGGAGGATCCGCCTGCAGCTCTACGTCTTCGTCGTGAGGTGCATCGCGTACCCCTTCAACGCCAAGCAGCCCACCGACATGGCCCGGAG GCAGCAGAAGGTTGCAGAAGACAAAGAGGAAAGTGAAGAAGAGCTTATCTTTACTGAAAGTAACAGTGAGGTTTCTGAGGAAGTGTATAC AGAGGAGGAGGAGGAGGAGTCCCAGGAGGAAGAGGAGGAAGAAGACAGTGACGAAGAGGAAAGAACAATTGAAACTGCAAAAGGGATTAA TGGAACTGTAAATTATGATAGTGTCAATTCTGACAACTCTAAGCCAAAGATATTTAAAAGTCAAATAGAGAACATAAATTTGACCAATGG CAGCAATGGGAGGAACACAGAGTCCCCAGCTGCCATTCACCCTTGTGGAAATCCTACAGTGATTGAGGACGCTTTGGACAAGATTAAAAG CAATGACCCTGACACCACAGAAGTCAATTTGAACAACATTGAGAACATCACAACACAGACCCTTACCCGCTTTGCTGAAGCCCTCAAGGA CAACACTGTGGTGAAGACGTTCAGTCTGGCCAACACGCATGCCGACGACAGTGCAGCCATGGCCATTGCAGAGATGCTCAAAGTCAATGA GCACATCACCAACGTAAACGTCGAGTCCAACTTCATAACGGGAAAGGGGATCCTGGCCATCATGAGAGCTCTCCAGCACAACACGGTGCT CACGGAGCTGCGTTTCCATAACCAGAGGCACATCATGGGCAGCCAGGTGGAAATGGAGATTGTCAAGCTGCTGAAGGAGAACACGACGCT GCTGAGGCTGGGATACCATTTTGAACTCCCAGGACCAAGAATGAGCATGACGAGCATTTTGACAAGAAATATGGATAAACAGAGGCAAAA ACGTTTGCAGGAGCAAAAACAGCAGGAGGGATACGATGGAGGACCCAATCTTAGGACCAAAGTCTGGCAAAGAGGAACACCTAGCTCTTC ACCTTATGTATCTCCCAGGCACTCACCCTGGTCATCCCCAAAACTCCCCAAAAAAGTCCAGACTGTGAGGAGCCGTCCTCTGTCTCCTGT GGCCACACCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCCCCCTCCTTCTTCCCAAAGGCTGCCACCACCTCCTCCTCCTCCCCCTCCTCC ACTCCCAGAGAAAAAGCTCATTACCAGAAACATTGCAGAAGTCATCAAACAACAGGAGAGTGCCCAACGGGCATTACAAAATGGACAAAA AAAGAAAAAAGGGAAAAAGGTCAAGAAACAGCCAAACAGTATTCTAAAGGAAATAAAAAATTCTCTGAGGTCAGTGCAAGAGAAGAAAAT GGAAGACAGTTCCCGACCTTCTACCCCACAGAGATCAGCTCATGAGAATCTCATGGAAGCAATTCGGGGAAGCAGCATAAAACAGCTAAA GCGGGTGGAAGTTCCAGAAGCCCTGCGATAAAAACATGATCTTTAGAAGAGGATGCAGAACTGTTCAGTGGTATTACATGAAATGCATTG TGAGATGTTTCTAAAATACCTTCTTCAATTCAAAATGATCCCTGACTTTAAAAATAATCTCACCCATTAATTCCAAAGAGAATCTTAAGA AACAATCAGCATGTTTCTTCTGTAAATATGAAAATAAATTTCTTTTTTATGTCGTGAGATTTGTATTGGCAAGAAGCAGTTAATTTAAAG ATGCTCTTCCTATCTGTGGATGTGTTGGTAACTCCGAGTTGTAATGAGTTCATGAAATGTGCTGTTATTTTTGTAATCTCAATAAATGTG GATTGAAGTTTTTTCCCTTTTTTTAAAGCCAAACTAATATTTTTCTGTGACTTGATACATCTGTCAGATTTTTGTAATCTCGATAAATGT GTATTGAAGTTTTTTCCCTTTTTTTAAAAAGCCAAACTAATATTTTTCTGTGAGTTAATACATCTGTCAGGTGTGTATGTAACATTACTG >In-frame_ENST00000412584_ENST00000458573_TCGA-A1-A0SN_CADPS2_chr7_122526052_-_LMOD2_chr7_123301913_length(amino acids)=569AA_start in transcript=121_stop in transcript=1830 MLDPSSSEEESDEGLEEESRDVLVAAGSSQRAPPAPTREGRRDAPGRAGGGGAARSVSPSPSVLSEGRDEPQRQLDDEQERRIRLQLYVF VVRCIAYPFNAKQPTDMARRQQKVAEDKEESEEELIFTESNSEVSEEVYTEEEEEESQEEEEEEDSDEEERTIETAKGINGTVNYDSVNS DNSKPKIFKSQIENINLTNGSNGRNTESPAAIHPCGNPTVIEDALDKIKSNDPDTTEVNLNNIENITTQTLTRFAEALKDNTVVKTFSLA NTHADDSAAMAIAEMLKVNEHITNVNVESNFITGKGILAIMRALQHNTVLTELRFHNQRHIMGSQVEMEIVKLLKENTTLLRLGYHFELP GPRMSMTSILTRNMDKQRQKRLQEQKQQEGYDGGPNLRTKVWQRGTPSSSPYVSPRHSPWSSPKLPKKVQTVRSRPLSPVATPPPPPPPP PPPPPSSQRLPPPPPPPPPPLPEKKLITRNIAEVIKQQESAQRALQNGQKKKKGKKVKKQPNSILKEIKNSLRSVQEKKMEDSSRPSTPQ -------------------------------------------------------------- >In-frame_ENST00000449022_ENST00000458573_TCGA-A1-A0SN_CADPS2_chr7_122526052_-_LMOD2_chr7_123301913_length(transcript)=2275nt_BP=359nt GGCGGGGATCCCCGAGCACCATGCTGGACCCGTCTTCCAGCGAAGAGGAGTCGGACGAGGGGCTGGAAGAGGAAAGCCGCGATGTGCTGG TGGCAGCCGGCAGCTCGCAGCGAGCTCCTCCAGCCCCGACTCGGGAAGGGCGGCGGGACGCGCCGGGGCGCGCGGGCGGCGGCGGCGCGG CCAGATCTGTGAGCCCGAGCCCCTCTGTGCTCAGCGAGGGGCGAGACGAGCCCCAGCGGCAGCTGGACGATGAGCAGGAGCGGAGGATCC GCCTGCAGCTCTACGTCTTCGTCGTGAGGTGCATCGCGTACCCCTTCAACGCCAAGCAGCCCACCGACATGGCCCGGAGGCAGCAGAAGG TTGCAGAAGACAAAGAGGAAAGTGAAGAAGAGCTTATCTTTACTGAAAGTAACAGTGAGGTTTCTGAGGAAGTGTATACAGAGGAGGAGG AGGAGGAGTCCCAGGAGGAAGAGGAGGAAGAAGACAGTGACGAAGAGGAAAGAACAATTGAAACTGCAAAAGGGATTAATGGAACTGTAA ATTATGATAGTGTCAATTCTGACAACTCTAAGCCAAAGATATTTAAAAGTCAAATAGAGAACATAAATTTGACCAATGGCAGCAATGGGA GGAACACAGAGTCCCCAGCTGCCATTCACCCTTGTGGAAATCCTACAGTGATTGAGGACGCTTTGGACAAGATTAAAAGCAATGACCCTG ACACCACAGAAGTCAATTTGAACAACATTGAGAACATCACAACACAGACCCTTACCCGCTTTGCTGAAGCCCTCAAGGACAACACTGTGG TGAAGACGTTCAGTCTGGCCAACACGCATGCCGACGACAGTGCAGCCATGGCCATTGCAGAGATGCTCAAAGTCAATGAGCACATCACCA ACGTAAACGTCGAGTCCAACTTCATAACGGGAAAGGGGATCCTGGCCATCATGAGAGCTCTCCAGCACAACACGGTGCTCACGGAGCTGC GTTTCCATAACCAGAGGCACATCATGGGCAGCCAGGTGGAAATGGAGATTGTCAAGCTGCTGAAGGAGAACACGACGCTGCTGAGGCTGG GATACCATTTTGAACTCCCAGGACCAAGAATGAGCATGACGAGCATTTTGACAAGAAATATGGATAAACAGAGGCAAAAACGTTTGCAGG AGCAAAAACAGCAGGAGGGATACGATGGAGGACCCAATCTTAGGACCAAAGTCTGGCAAAGAGGAACACCTAGCTCTTCACCTTATGTAT CTCCCAGGCACTCACCCTGGTCATCCCCAAAACTCCCCAAAAAAGTCCAGACTGTGAGGAGCCGTCCTCTGTCTCCTGTGGCCACACCTC CTCCTCCTCCCCCTCCTCCTCCTCCTCCCCCTCCTTCTTCCCAAAGGCTGCCACCACCTCCTCCTCCTCCCCCTCCTCCACTCCCAGAGA AAAAGCTCATTACCAGAAACATTGCAGAAGTCATCAAACAACAGGAGAGTGCCCAACGGGCATTACAAAATGGACAAAAAAAGAAAAAAG GGAAAAAGGTCAAGAAACAGCCAAACAGTATTCTAAAGGAAATAAAAAATTCTCTGAGGTCAGTGCAAGAGAAGAAAATGGAAGACAGTT CCCGACCTTCTACCCCACAGAGATCAGCTCATGAGAATCTCATGGAAGCAATTCGGGGAAGCAGCATAAAACAGCTAAAGCGGGTGGAAG TTCCAGAAGCCCTGCGATAAAAACATGATCTTTAGAAGAGGATGCAGAACTGTTCAGTGGTATTACATGAAATGCATTGTGAGATGTTTC TAAAATACCTTCTTCAATTCAAAATGATCCCTGACTTTAAAAATAATCTCACCCATTAATTCCAAAGAGAATCTTAAGAAACAATCAGCA TGTTTCTTCTGTAAATATGAAAATAAATTTCTTTTTTATGTCGTGAGATTTGTATTGGCAAGAAGCAGTTAATTTAAAGATGCTCTTCCT ATCTGTGGATGTGTTGGTAACTCCGAGTTGTAATGAGTTCATGAAATGTGCTGTTATTTTTGTAATCTCAATAAATGTGGATTGAAGTTT TTTCCCTTTTTTTAAAGCCAAACTAATATTTTTCTGTGACTTGATACATCTGTCAGATTTTTGTAATCTCGATAAATGTGTATTGAAGTT TTTTCCCTTTTTTTAAAAAGCCAAACTAATATTTTTCTGTGAGTTAATACATCTGTCAGGTGTGTATGTAACATTACTGGACATTAAAAA >In-frame_ENST00000449022_ENST00000458573_TCGA-A1-A0SN_CADPS2_chr7_122526052_-_LMOD2_chr7_123301913_length(amino acids)=569AA_start in transcript=20_stop in transcript=1729 MLDPSSSEEESDEGLEEESRDVLVAAGSSQRAPPAPTREGRRDAPGRAGGGGAARSVSPSPSVLSEGRDEPQRQLDDEQERRIRLQLYVF VVRCIAYPFNAKQPTDMARRQQKVAEDKEESEEELIFTESNSEVSEEVYTEEEEEESQEEEEEEDSDEEERTIETAKGINGTVNYDSVNS DNSKPKIFKSQIENINLTNGSNGRNTESPAAIHPCGNPTVIEDALDKIKSNDPDTTEVNLNNIENITTQTLTRFAEALKDNTVVKTFSLA NTHADDSAAMAIAEMLKVNEHITNVNVESNFITGKGILAIMRALQHNTVLTELRFHNQRHIMGSQVEMEIVKLLKENTTLLRLGYHFELP GPRMSMTSILTRNMDKQRQKRLQEQKQQEGYDGGPNLRTKVWQRGTPSSSPYVSPRHSPWSSPKLPKKVQTVRSRPLSPVATPPPPPPPP PPPPPSSQRLPPPPPPPPPPLPEKKLITRNIAEVIKQQESAQRALQNGQKKKKGKKVKKQPNSILKEIKNSLRSVQEKKMEDSSRPSTPQ -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for CADPS2-LMOD2 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
Tgene | LMOD2 | chr7:122526052 | chr7:123301913 | ENST00000458573 | 0 | 3 | 162_497 | 91.0 | 548.0 | actin 2 | |
Tgene | LMOD2 | chr7:122526053 | chr7:123301914 | ENST00000458573 | 0 | 3 | 162_497 | 91.0 | 548.0 | actin 2 | |
Tgene | LMOD2 | chr7:122526052 | chr7:123301913 | ENST00000458573 | 0 | 3 | 521_540 | 91.0 | 548.0 | actin 3 | |
Tgene | LMOD2 | chr7:122526053 | chr7:123301914 | ENST00000458573 | 0 | 3 | 521_540 | 91.0 | 548.0 | actin 3 |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | CADPS2 | chr7:122526052 | chr7:123301913 | ENST00000412584 | - | 1 | 28 | 755_1074 | 113.0 | 1256.0 | DRD2 |
Hgene | CADPS2 | chr7:122526052 | chr7:123301913 | ENST00000449022 | - | 1 | 30 | 755_1074 | 113.0 | 1297.0 | DRD2 |
Hgene | CADPS2 | chr7:122526053 | chr7:123301914 | ENST00000412584 | - | 1 | 28 | 755_1074 | 113.0 | 1256.0 | DRD2 |
Hgene | CADPS2 | chr7:122526053 | chr7:123301914 | ENST00000449022 | - | 1 | 30 | 755_1074 | 113.0 | 1297.0 | DRD2 |
Tgene | LMOD2 | chr7:122526052 | chr7:123301913 | ENST00000458573 | 0 | 3 | 1_161 | 91.0 | 548.0 | actin 1 | |
Tgene | LMOD2 | chr7:122526053 | chr7:123301914 | ENST00000458573 | 0 | 3 | 1_161 | 91.0 | 548.0 | actin 1 | |
Tgene | LMOD2 | chr7:122526052 | chr7:123301913 | ENST00000458573 | 0 | 3 | 1_47 | 91.0 | 548.0 | tropomyosin alpha | |
Tgene | LMOD2 | chr7:122526053 | chr7:123301914 | ENST00000458573 | 0 | 3 | 1_47 | 91.0 | 548.0 | tropomyosin alpha |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for CADPS2-LMOD2 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Hgene | CADPS2 | Q86UW7 | DB11348 | Calcium Phosphate | Agonist | Small molecule | Approved |
Hgene | CADPS2 | Q86UW7 | DB11348 | Calcium Phosphate | Agonist | Small molecule | Approved |
Hgene | CADPS2 | Q86UW7 | DB11348 | Calcium Phosphate | Agonist | Small molecule | Approved |
Hgene | CADPS2 | Q86UW7 | DB14481 | Calcium phosphate dihydrate | Small molecule | Approved | |
Hgene | CADPS2 | Q86UW7 | DB14481 | Calcium phosphate dihydrate | Small molecule | Approved | |
Hgene | CADPS2 | Q86UW7 | DB14481 | Calcium phosphate dihydrate | Small molecule | Approved | |
Hgene | CADPS2 | Q86UW7 | DB11093 | Calcium citrate | Agonist | Small molecule | Approved|Investigational |
Hgene | CADPS2 | Q86UW7 | DB11093 | Calcium citrate | Agonist | Small molecule | Approved|Investigational |
Hgene | CADPS2 | Q86UW7 | DB11093 | Calcium citrate | Agonist | Small molecule | Approved|Investigational |
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Related Diseases for CADPS2-LMOD2 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | CADPS2 | C0004352 | Autistic Disorder | 1 | CTD_human |
Hgene | CADPS2 | C0008370 | Cholestasis | 1 | CTD_human |
Hgene | CADPS2 | C0013146 | Drug abuse | 1 | CTD_human |
Hgene | CADPS2 | C0013170 | Drug habituation | 1 | CTD_human |
Hgene | CADPS2 | C0013222 | Drug Use Disorders | 1 | CTD_human |
Hgene | CADPS2 | C0019193 | Hepatitis, Toxic | 1 | CTD_human |
Hgene | CADPS2 | C0029231 | Organic Mental Disorders, Substance-Induced | 1 | CTD_human |
Hgene | CADPS2 | C0036341 | Schizophrenia | 1 | PSYGENET |
Hgene | CADPS2 | C0038580 | Substance Dependence | 1 | CTD_human |
Hgene | CADPS2 | C0038586 | Substance Use Disorders | 1 | CTD_human |
Hgene | CADPS2 | C0236969 | Substance-Related Disorders | 1 | CTD_human |
Hgene | CADPS2 | C0740858 | Substance abuse problem | 1 | CTD_human |
Hgene | CADPS2 | C0860207 | Drug-Induced Liver Disease | 1 | CTD_human |
Hgene | CADPS2 | C1262760 | Hepatitis, Drug-Induced | 1 | CTD_human |
Hgene | CADPS2 | C1510472 | Drug Dependence | 1 | CTD_human |
Hgene | CADPS2 | C3658290 | Drug-Induced Acute Liver Injury | 1 | CTD_human |
Hgene | CADPS2 | C4277682 | Chemical and Drug Induced Liver Injury | 1 | CTD_human |
Hgene | CADPS2 | C4279912 | Chemically-Induced Liver Toxicity | 1 | CTD_human |
Hgene | CADPS2 | C4316881 | Prescription Drug Abuse | 1 | CTD_human |
Tgene | LMOD2 | C0033975 | Psychotic Disorders | 1 | PSYGENET |
Tgene | LMOD2 | C0036341 | Schizophrenia | 1 | PSYGENET |
Tgene | LMOD2 | C0349204 | Nonorganic psychosis | 1 | PSYGENET |