|
Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:CAPRIN1-CAT (FusionGDB2 ID:12984) |
Fusion Gene Summary for CAPRIN1-CAT |
Fusion gene summary |
Fusion gene information | Fusion gene name: CAPRIN1-CAT | Fusion gene ID: 12984 | Hgene | Tgene | Gene symbol | CAPRIN1 | CAT | Gene ID | 4076 | 10249 |
Gene name | cell cycle associated protein 1 | glycine-N-acyltransferase | |
Synonyms | GPIAP1|GPIP137|GRIP137|M11S1|RNG105|p137GPI | ACGNAT|CAT|GAT | |
Cytomap | 11p13 | 11q12.1 | |
Type of gene | protein-coding | protein-coding | |
Description | caprin-1GPI-anchored membrane protein 1GPI-anchored protein p137GPI-p137RNA granule protein 105activation/proliferation-associated protein 1caprin 1cytoplasmic activation- and proliferation-associated protein 1cytoplasmic activation/proliferation- | glycine N-acyltransferaseAAcHRP-1(CLP)acyl-CoA:glycine N-acyltransferasearalkyl acyl-CoA N-acyltransferasearalkyl acyl-CoA:amino acid N-acyltransferasearalkyl-CoA N-acyltransferasebenzoyl-coenzyme A:glycine N-acyltransferaseepididymis secretory sp | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | Q14444 | Q6ZRH7 | |
Ensembl transtripts involved in fusion gene | ENST00000341394, ENST00000389645, ENST00000532820, ENST00000530820, ENST00000529307, ENST00000533657, | ENST00000241052, ENST00000534710, | |
Fusion gene scores | * DoF score | 11 X 11 X 7=847 | 14 X 11 X 8=1232 |
# samples | 13 | 18 | |
** MAII score | log2(13/847*10)=-2.70385034630374 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(18/1232*10)=-2.77493344436523 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: CAPRIN1 [Title/Abstract] AND CAT [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | CAPRIN1(34093534)-CAT(34470739), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | CAT | GO:0006544 | glycine metabolic process | 22475485 |
Tgene | CAT | GO:1901787 | benzoyl-CoA metabolic process | 22475485 |
Fusion gene breakpoints across CAPRIN1 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across CAT (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | BRCA | TCGA-AC-A2BK-01A | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470739 | + |
ChimerDB4 | BRCA | TCGA-AC-A2BK | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470738 | + |
ChimerDB4 | BRCA | TCGA-AC-A2BK-01A | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470739 | + |
Top |
Fusion Gene ORF analysis for CAPRIN1-CAT |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000341394 | ENST00000241052 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470739 | + |
5CDS-intron | ENST00000341394 | ENST00000534710 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470739 | + |
In-frame | ENST00000389645 | ENST00000241052 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470739 | + |
5CDS-intron | ENST00000389645 | ENST00000534710 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470739 | + |
In-frame | ENST00000532820 | ENST00000241052 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470739 | + |
5CDS-intron | ENST00000532820 | ENST00000534710 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470739 | + |
In-frame | ENST00000530820 | ENST00000241052 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470739 | + |
5CDS-intron | ENST00000530820 | ENST00000534710 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470739 | + |
In-frame | ENST00000529307 | ENST00000241052 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470739 | + |
5CDS-intron | ENST00000529307 | ENST00000534710 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470739 | + |
intron-3CDS | ENST00000533657 | ENST00000241052 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470739 | + |
intron-intron | ENST00000533657 | ENST00000534710 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470739 | + |
In-frame | ENST00000341394 | ENST00000241052 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470738 | + |
5CDS-intron | ENST00000341394 | ENST00000534710 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470738 | + |
In-frame | ENST00000389645 | ENST00000241052 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470738 | + |
5CDS-intron | ENST00000389645 | ENST00000534710 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470738 | + |
In-frame | ENST00000532820 | ENST00000241052 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470738 | + |
5CDS-intron | ENST00000532820 | ENST00000534710 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470738 | + |
In-frame | ENST00000530820 | ENST00000241052 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470738 | + |
5CDS-intron | ENST00000530820 | ENST00000534710 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470738 | + |
In-frame | ENST00000529307 | ENST00000241052 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470738 | + |
5CDS-intron | ENST00000529307 | ENST00000534710 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470738 | + |
intron-3CDS | ENST00000533657 | ENST00000241052 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470738 | + |
intron-intron | ENST00000533657 | ENST00000534710 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470738 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000341394 | CAPRIN1 | chr11 | 34093534 | + | ENST00000241052 | CAT | chr11 | 34470739 | + | 2702 | 555 | 114 | 2072 | 652 |
ENST00000389645 | CAPRIN1 | chr11 | 34093534 | + | ENST00000241052 | CAT | chr11 | 34470739 | + | 2653 | 506 | 65 | 2023 | 652 |
ENST00000532820 | CAPRIN1 | chr11 | 34093534 | + | ENST00000241052 | CAT | chr11 | 34470739 | + | 2724 | 577 | 25 | 2094 | 689 |
ENST00000530820 | CAPRIN1 | chr11 | 34093534 | + | ENST00000241052 | CAT | chr11 | 34470739 | + | 2605 | 458 | 5 | 1975 | 656 |
ENST00000529307 | CAPRIN1 | chr11 | 34093534 | + | ENST00000241052 | CAT | chr11 | 34470739 | + | 2502 | 355 | 232 | 1872 | 546 |
ENST00000341394 | CAPRIN1 | chr11 | 34093534 | + | ENST00000241052 | CAT | chr11 | 34470738 | + | 2702 | 555 | 114 | 2072 | 652 |
ENST00000389645 | CAPRIN1 | chr11 | 34093534 | + | ENST00000241052 | CAT | chr11 | 34470738 | + | 2653 | 506 | 65 | 2023 | 652 |
ENST00000532820 | CAPRIN1 | chr11 | 34093534 | + | ENST00000241052 | CAT | chr11 | 34470738 | + | 2724 | 577 | 25 | 2094 | 689 |
ENST00000530820 | CAPRIN1 | chr11 | 34093534 | + | ENST00000241052 | CAT | chr11 | 34470738 | + | 2605 | 458 | 5 | 1975 | 656 |
ENST00000529307 | CAPRIN1 | chr11 | 34093534 | + | ENST00000241052 | CAT | chr11 | 34470738 | + | 2502 | 355 | 232 | 1872 | 546 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000341394 | ENST00000241052 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470739 | + | 0.000964603 | 0.9990355 |
ENST00000389645 | ENST00000241052 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470739 | + | 0.000867979 | 0.9991321 |
ENST00000532820 | ENST00000241052 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470739 | + | 0.000939609 | 0.99906045 |
ENST00000530820 | ENST00000241052 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470739 | + | 0.000834498 | 0.99916553 |
ENST00000529307 | ENST00000241052 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470739 | + | 0.000600014 | 0.9994 |
ENST00000341394 | ENST00000241052 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470738 | + | 0.000964603 | 0.9990355 |
ENST00000389645 | ENST00000241052 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470738 | + | 0.000867979 | 0.9991321 |
ENST00000532820 | ENST00000241052 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470738 | + | 0.000939609 | 0.99906045 |
ENST00000530820 | ENST00000241052 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470738 | + | 0.000834498 | 0.99916553 |
ENST00000529307 | ENST00000241052 | CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470738 | + | 0.000600014 | 0.9994 |
Top |
Fusion Genomic Features for CAPRIN1-CAT |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470738 | + | 4.09E-08 | 1 |
CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470738 | + | 4.09E-08 | 1 |
CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470738 | + | 4.09E-08 | 1 |
CAPRIN1 | chr11 | 34093534 | + | CAT | chr11 | 34470738 | + | 4.09E-08 | 1 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
Top |
Fusion Protein Features for CAPRIN1-CAT |
Go to FGviewer for the breakpoints of chr11:34093534-chr11:34470739 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
CAPRIN1 | CAT |
FUNCTION: May regulate the transport and translation of mRNAs of proteins involved in synaptic plasticity in neurons and cell proliferation and migration in multiple cell types. Binds directly and selectively to MYC and CCND2 RNAs. In neuronal cells, directly binds to several mRNAs associated with RNA granules, including BDNF, CAMK2A, CREB1, MAP2, NTRK2 mRNAs, as well as to GRIN1 and KPNB1 mRNAs, but not to rRNAs. {ECO:0000269|PubMed:17210633}. | FUNCTION: Probably involved in sperm cell hyperactivation via its association with CATSPER1. Sperm cell hyperactivation is needed for sperm motility which is essential late in the preparation of sperm for fertilization. {ECO:0000250|UniProtKB:C6KI89}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | CAPRIN1 | chr11:34093534 | chr11:34470738 | ENST00000341394 | + | 4 | 19 | 60_94 | 122.0 | 710.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CAPRIN1 | chr11:34093534 | chr11:34470738 | ENST00000389645 | + | 4 | 18 | 60_94 | 122.0 | 695.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CAPRIN1 | chr11:34093534 | chr11:34470738 | ENST00000530820 | + | 3 | 17 | 60_94 | 122.0 | 695.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CAPRIN1 | chr11:34093534 | chr11:34470738 | ENST00000532820 | + | 3 | 18 | 60_94 | 122.0 | 710.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CAPRIN1 | chr11:34093534 | chr11:34470739 | ENST00000341394 | + | 4 | 19 | 60_94 | 122.0 | 710.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CAPRIN1 | chr11:34093534 | chr11:34470739 | ENST00000389645 | + | 4 | 18 | 60_94 | 122.0 | 695.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CAPRIN1 | chr11:34093534 | chr11:34470739 | ENST00000530820 | + | 3 | 17 | 60_94 | 122.0 | 695.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CAPRIN1 | chr11:34093534 | chr11:34470739 | ENST00000532820 | + | 3 | 18 | 60_94 | 122.0 | 710.0 | Coiled coil | Ontology_term=ECO:0000255 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | CAPRIN1 | chr11:34093534 | chr11:34470738 | ENST00000341394 | + | 4 | 19 | 125_153 | 122.0 | 710.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CAPRIN1 | chr11:34093534 | chr11:34470738 | ENST00000389645 | + | 4 | 18 | 125_153 | 122.0 | 695.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CAPRIN1 | chr11:34093534 | chr11:34470738 | ENST00000530820 | + | 3 | 17 | 125_153 | 122.0 | 695.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CAPRIN1 | chr11:34093534 | chr11:34470738 | ENST00000532820 | + | 3 | 18 | 125_153 | 122.0 | 710.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CAPRIN1 | chr11:34093534 | chr11:34470739 | ENST00000341394 | + | 4 | 19 | 125_153 | 122.0 | 710.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CAPRIN1 | chr11:34093534 | chr11:34470739 | ENST00000389645 | + | 4 | 18 | 125_153 | 122.0 | 695.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CAPRIN1 | chr11:34093534 | chr11:34470739 | ENST00000530820 | + | 3 | 17 | 125_153 | 122.0 | 695.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CAPRIN1 | chr11:34093534 | chr11:34470739 | ENST00000532820 | + | 3 | 18 | 125_153 | 122.0 | 710.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CAPRIN1 | chr11:34093534 | chr11:34470738 | ENST00000341394 | + | 4 | 19 | 360_381 | 122.0 | 710.0 | Region | Note=G3BP1-binding |
Hgene | CAPRIN1 | chr11:34093534 | chr11:34470738 | ENST00000389645 | + | 4 | 18 | 360_381 | 122.0 | 695.0 | Region | Note=G3BP1-binding |
Hgene | CAPRIN1 | chr11:34093534 | chr11:34470738 | ENST00000530820 | + | 3 | 17 | 360_381 | 122.0 | 695.0 | Region | Note=G3BP1-binding |
Hgene | CAPRIN1 | chr11:34093534 | chr11:34470738 | ENST00000532820 | + | 3 | 18 | 360_381 | 122.0 | 710.0 | Region | Note=G3BP1-binding |
Hgene | CAPRIN1 | chr11:34093534 | chr11:34470739 | ENST00000341394 | + | 4 | 19 | 360_381 | 122.0 | 710.0 | Region | Note=G3BP1-binding |
Hgene | CAPRIN1 | chr11:34093534 | chr11:34470739 | ENST00000389645 | + | 4 | 18 | 360_381 | 122.0 | 695.0 | Region | Note=G3BP1-binding |
Hgene | CAPRIN1 | chr11:34093534 | chr11:34470739 | ENST00000530820 | + | 3 | 17 | 360_381 | 122.0 | 695.0 | Region | Note=G3BP1-binding |
Hgene | CAPRIN1 | chr11:34093534 | chr11:34470739 | ENST00000532820 | + | 3 | 18 | 360_381 | 122.0 | 710.0 | Region | Note=G3BP1-binding |
Top |
Fusion Gene Sequence for CAPRIN1-CAT |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000341394_ENST00000241052_TCGA-AC-A2BK-01A_CAPRIN1_chr11_34093534_+_CAT_chr11_34470739_length(transcript)=2702nt_BP=555nt CAGAGGGCTGCTGGCTGGCTAAGTCCCTCCCGCTCCCGGCTCTCGCCTCACTAGGAGCGGCTCTCGGTGCAGCGGGACAGGGCGAAGCGG CCTGCGCCCACGGAGCGCGCGACACTGCCCGGAAGGGACCACCACCCTTGCCCCCTCAGCTGCCCACTCGTGATTTCCAGCGGCCTCCGC GCGCGCACGATGCCCTCGGCCACCAGCCACAGCGGGAGCGGCAGCAAGTCGTCCGGACCGCCACCGCCGTCGGGTTCCTCCGGGAGTGAG GCGGCCGCGGGAGCCGGGGCCGCCGCGCCGGCTTCTCAGCACCCCGCAACCGGCACCGGCGCTGTCCAGACCGAGGCCATGAAGCAGATT CTCGGGGTGATCGACAAGAAACTTCGGAACCTGGAGAAGAAAAAGGGTAAGCTTGATGATTACCAGGAACGAATGAACAAAGGGGAAAGG CTTAATCAAGATCAGCTGGATGCCGTTTCTAAGTACCAGGAAGTCACAAATAATTTGGAGTTTGCAAAAGAATTACAGAGGAGTTTCATG GCACTAAGTCAAGATAAAGCTGATGTCCTGACCACTGGAGCTGGTAACCCAGTAGGAGACAAACTTAATGTTATTACAGTAGGGCCCCGT GGGCCCCTTCTTGTTCAGGATGTGGTTTTCACTGATGAAATGGCTCATTTTGACCGAGAGAGAATTCCTGAGAGAGTTGTGCATGCTAAA GGAGCAGGGGCCTTTGGCTACTTTGAGGTCACACATGACATTACCAAATACTCCAAGGCAAAGGTATTTGAGCATATTGGAAAGAAGACT CCCATCGCAGTTCGGTTCTCCACTGTTGCTGGAGAATCGGGTTCAGCTGACACAGTTCGGGACCCTCGTGGGTTTGCAGTGAAATTTTAC ACAGAAGATGGTAACTGGGATCTCGTTGGAAATAACACCCCCATTTTCTTCATCAGGGATCCCATATTGTTTCCATCTTTTATCCACAGC CAAAAGAGAAATCCTCAGACACATCTGAAGGATCCGGACATGGTCTGGGACTTCTGGAGCCTACGTCCTGAGTCTCTGCATCAGGTTTCT TTCTTGTTCAGTGATCGGGGGATTCCAGATGGACATCGCCACATGAATGGATATGGATCACATACTTTCAAGCTGGTTAATGCAAATGGG GAGGCAGTTTATTGCAAATTCCATTATAAGACTGACCAGGGCATCAAAAACCTTTCTGTTGAAGATGCGGCGAGACTTTCCCAGGAAGAT CCTGACTATGGCATCCGGGATCTTTTTAACGCCATTGCCACAGGAAAGTACCCCTCCTGGACTTTTTACATCCAGGTCATGACATTTAAT CAGGCAGAAACTTTTCCATTTAATCCATTCGATCTCACCAAGGTTTGGCCTCACAAGGACTACCCTCTCATCCCAGTTGGTAAACTGGTC TTAAACCGGAATCCAGTTAATTACTTTGCTGAGGTTGAACAGATAGCCTTCGACCCAAGCAACATGCCACCTGGCATTGAGGCCAGTCCT GACAAAATGCTTCAGGGCCGCCTTTTTGCCTATCCTGACACTCACCGCCATCGCCTGGGACCCAATTATCTTCATATACCTGTGAACTGT CCCTACCGTGCTCGAGTGGCCAACTACCAGCGTGACGGCCCGATGTGCATGCAGGACAATCAGGGTGGTGCTCCAAATTACTACCCCAAC AGCTTTGGTGCTCCGGAACAACAGCCTTCTGCCCTGGAGCACAGCATCCAATATTCTGGAGAAGTGCGGAGATTCAACACTGCCAATGAT GATAACGTTACTCAGGTGCGGGCATTCTATGTGAACGTGCTGAATGAGGAACAGAGGAAACGTCTGTGTGAGAACATTGCCGGCCACCTG AAGGATGCACAAATTTTCATCCAGAAGAAAGCGGTCAAGAACTTCACTGAGGTCCACCCTGACTACGGGAGCCACATCCAGGCTCTTCTG GACAAGTACAATGCTGAGAAGCCTAAGAATGCGATTCACACCTTTGTGCAGTCCGGATCTCACTTGGCGGCAAGGGAGAAGGCAAATCTG TGAGGCCGGGGCCCTGCACCTGTGCAGCGAAGCTTAGCGTTCATCCGTGTAACCCGCTCATCACTGGATGAAGATTCTCCTGTGCTAGAT GTGCAAATGCAAGCTAGTGGCTTCAAAATAGAGAATCCCACTTTCTATAGCAGATTGTGTAACAATTTTAATGCTATTTCCCCAGGGGAA AATGAAGGTTAGGATTTAACAGTCATTTAAAAAAAAAATTTGTTTTGACGGATGATTGGATTATTCATTTAAAATGATTAGAAGGCAAGT TTCTAGCTAGAAATATGATTTTATTTGACAAAATTTGTTGAAATTATGTATGTTTACATATCACCTCATGGCCTATTATATTAAAATATG GCTATAAATATATAAAAAGAAAAGATAAAGATGATCTACTCAGAAATTTTTATTTTTCTAAGGTTCTCATAGGAAAAGTACATTTAATAC AGCAGTGTCATCAGAAGATAACTTGAGCACCGTCATGGCTTAATGTTTATTCCTGATAATAATTGATCAAATTCATTTTTTTCACTGGAG TTACATTAATGTTAATTCAGCACTGATTTCACAACAGATCAATTTGTAATTGCTTACATTTTTACAATAAATAATCTGTACGTAAGAACA >In-frame_ENST00000341394_ENST00000241052_TCGA-AC-A2BK-01A_CAPRIN1_chr11_34093534_+_CAT_chr11_34470739_length(amino acids)=652AA_start in transcript=114_stop in transcript=2072 MPGRDHHPCPLSCPLVISSGLRARTMPSATSHSGSGSKSSGPPPPSGSSGSEAAAGAGAAAPASQHPATGTGAVQTEAMKQILGVIDKKL RNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDKADVLTTGAGNPVGDKLNVITVGPRGPLLVQDV VFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDL VGNNTPIFFIRDPILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFH YKTDQGIKNLSVEDAARLSQEDPDYGIRDLFNAIATGKYPSWTFYIQVMTFNQAETFPFNPFDLTKVWPHKDYPLIPVGKLVLNRNPVNY FAEVEQIAFDPSNMPPGIEASPDKMLQGRLFAYPDTHRHRLGPNYLHIPVNCPYRARVANYQRDGPMCMQDNQGGAPNYYPNSFGAPEQQ PSALEHSIQYSGEVRRFNTANDDNVTQVRAFYVNVLNEEQRKRLCENIAGHLKDAQIFIQKKAVKNFTEVHPDYGSHIQALLDKYNAEKP -------------------------------------------------------------- >In-frame_ENST00000389645_ENST00000241052_TCGA-AC-A2BK-01A_CAPRIN1_chr11_34093534_+_CAT_chr11_34470739_length(transcript)=2653nt_BP=506nt ACTAGGAGCGGCTCTCGGTGCAGCGGGACAGGGCGAAGCGGCCTGCGCCCACGGAGCGCGCGACACTGCCCGGAAGGGACCACCACCCTT GCCCCCTCAGCTGCCCACTCGTGATTTCCAGCGGCCTCCGCGCGCGCACGATGCCCTCGGCCACCAGCCACAGCGGGAGCGGCAGCAAGT CGTCCGGACCGCCACCGCCGTCGGGTTCCTCCGGGAGTGAGGCGGCCGCGGGAGCCGGGGCCGCCGCGCCGGCTTCTCAGCACCCCGCAA CCGGCACCGGCGCTGTCCAGACCGAGGCCATGAAGCAGATTCTCGGGGTGATCGACAAGAAACTTCGGAACCTGGAGAAGAAAAAGGGTA AGCTTGATGATTACCAGGAACGAATGAACAAAGGGGAAAGGCTTAATCAAGATCAGCTGGATGCCGTTTCTAAGTACCAGGAAGTCACAA ATAATTTGGAGTTTGCAAAAGAATTACAGAGGAGTTTCATGGCACTAAGTCAAGATAAAGCTGATGTCCTGACCACTGGAGCTGGTAACC CAGTAGGAGACAAACTTAATGTTATTACAGTAGGGCCCCGTGGGCCCCTTCTTGTTCAGGATGTGGTTTTCACTGATGAAATGGCTCATT TTGACCGAGAGAGAATTCCTGAGAGAGTTGTGCATGCTAAAGGAGCAGGGGCCTTTGGCTACTTTGAGGTCACACATGACATTACCAAAT ACTCCAAGGCAAAGGTATTTGAGCATATTGGAAAGAAGACTCCCATCGCAGTTCGGTTCTCCACTGTTGCTGGAGAATCGGGTTCAGCTG ACACAGTTCGGGACCCTCGTGGGTTTGCAGTGAAATTTTACACAGAAGATGGTAACTGGGATCTCGTTGGAAATAACACCCCCATTTTCT TCATCAGGGATCCCATATTGTTTCCATCTTTTATCCACAGCCAAAAGAGAAATCCTCAGACACATCTGAAGGATCCGGACATGGTCTGGG ACTTCTGGAGCCTACGTCCTGAGTCTCTGCATCAGGTTTCTTTCTTGTTCAGTGATCGGGGGATTCCAGATGGACATCGCCACATGAATG GATATGGATCACATACTTTCAAGCTGGTTAATGCAAATGGGGAGGCAGTTTATTGCAAATTCCATTATAAGACTGACCAGGGCATCAAAA ACCTTTCTGTTGAAGATGCGGCGAGACTTTCCCAGGAAGATCCTGACTATGGCATCCGGGATCTTTTTAACGCCATTGCCACAGGAAAGT ACCCCTCCTGGACTTTTTACATCCAGGTCATGACATTTAATCAGGCAGAAACTTTTCCATTTAATCCATTCGATCTCACCAAGGTTTGGC CTCACAAGGACTACCCTCTCATCCCAGTTGGTAAACTGGTCTTAAACCGGAATCCAGTTAATTACTTTGCTGAGGTTGAACAGATAGCCT TCGACCCAAGCAACATGCCACCTGGCATTGAGGCCAGTCCTGACAAAATGCTTCAGGGCCGCCTTTTTGCCTATCCTGACACTCACCGCC ATCGCCTGGGACCCAATTATCTTCATATACCTGTGAACTGTCCCTACCGTGCTCGAGTGGCCAACTACCAGCGTGACGGCCCGATGTGCA TGCAGGACAATCAGGGTGGTGCTCCAAATTACTACCCCAACAGCTTTGGTGCTCCGGAACAACAGCCTTCTGCCCTGGAGCACAGCATCC AATATTCTGGAGAAGTGCGGAGATTCAACACTGCCAATGATGATAACGTTACTCAGGTGCGGGCATTCTATGTGAACGTGCTGAATGAGG AACAGAGGAAACGTCTGTGTGAGAACATTGCCGGCCACCTGAAGGATGCACAAATTTTCATCCAGAAGAAAGCGGTCAAGAACTTCACTG AGGTCCACCCTGACTACGGGAGCCACATCCAGGCTCTTCTGGACAAGTACAATGCTGAGAAGCCTAAGAATGCGATTCACACCTTTGTGC AGTCCGGATCTCACTTGGCGGCAAGGGAGAAGGCAAATCTGTGAGGCCGGGGCCCTGCACCTGTGCAGCGAAGCTTAGCGTTCATCCGTG TAACCCGCTCATCACTGGATGAAGATTCTCCTGTGCTAGATGTGCAAATGCAAGCTAGTGGCTTCAAAATAGAGAATCCCACTTTCTATA GCAGATTGTGTAACAATTTTAATGCTATTTCCCCAGGGGAAAATGAAGGTTAGGATTTAACAGTCATTTAAAAAAAAAATTTGTTTTGAC GGATGATTGGATTATTCATTTAAAATGATTAGAAGGCAAGTTTCTAGCTAGAAATATGATTTTATTTGACAAAATTTGTTGAAATTATGT ATGTTTACATATCACCTCATGGCCTATTATATTAAAATATGGCTATAAATATATAAAAAGAAAAGATAAAGATGATCTACTCAGAAATTT TTATTTTTCTAAGGTTCTCATAGGAAAAGTACATTTAATACAGCAGTGTCATCAGAAGATAACTTGAGCACCGTCATGGCTTAATGTTTA TTCCTGATAATAATTGATCAAATTCATTTTTTTCACTGGAGTTACATTAATGTTAATTCAGCACTGATTTCACAACAGATCAATTTGTAA >In-frame_ENST00000389645_ENST00000241052_TCGA-AC-A2BK-01A_CAPRIN1_chr11_34093534_+_CAT_chr11_34470739_length(amino acids)=652AA_start in transcript=65_stop in transcript=2023 MPGRDHHPCPLSCPLVISSGLRARTMPSATSHSGSGSKSSGPPPPSGSSGSEAAAGAGAAAPASQHPATGTGAVQTEAMKQILGVIDKKL RNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDKADVLTTGAGNPVGDKLNVITVGPRGPLLVQDV VFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDL VGNNTPIFFIRDPILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFH YKTDQGIKNLSVEDAARLSQEDPDYGIRDLFNAIATGKYPSWTFYIQVMTFNQAETFPFNPFDLTKVWPHKDYPLIPVGKLVLNRNPVNY FAEVEQIAFDPSNMPPGIEASPDKMLQGRLFAYPDTHRHRLGPNYLHIPVNCPYRARVANYQRDGPMCMQDNQGGAPNYYPNSFGAPEQQ PSALEHSIQYSGEVRRFNTANDDNVTQVRAFYVNVLNEEQRKRLCENIAGHLKDAQIFIQKKAVKNFTEVHPDYGSHIQALLDKYNAEKP -------------------------------------------------------------- >In-frame_ENST00000532820_ENST00000241052_TCGA-AC-A2BK-01A_CAPRIN1_chr11_34093534_+_CAT_chr11_34470739_length(transcript)=2724nt_BP=577nt GTGCGAGGCCCAGCCGGGCGCCCCGCTGGCGGGTCGCGCGCGCGCCCGCGCACTCTTCCTGCCCTCGAGGCGCGCCGCGCCCCCTCCCCC ACCCGCTCGCGTAGGCTACCGCTCGCTGCGCGTTTTGTCCCGCGTCTCGCCCCGTCCGTCTCCTGACTGGCCGCTCTTGTCCTTCCTCCC GCTTTTTCTTCTCTCTCCTTGCGGTCTGAAGATGCCCTCGGCCACCAGCCACAGCGGGAGCGGCAGCAAGTCGTCCGGACCGCCACCGCC GTCGGGTTCCTCCGGGAGTGAGGCGGCCGCGGGAGCCGGGGCCGCCGCGCCGGCTTCTCAGCACCCCGCAACCGGCACCGGCGCTGTCCA GACCGAGGCCATGAAGCAGATTCTCGGGGTGATCGACAAGAAACTTCGGAACCTGGAGAAGAAAAAGGGTAAGCTTGATGATTACCAGGA ACGAATGAACAAAGGGGAAAGGCTTAATCAAGATCAGCTGGATGCCGTTTCTAAGTACCAGGAAGTCACAAATAATTTGGAGTTTGCAAA AGAATTACAGAGGAGTTTCATGGCACTAAGTCAAGATAAAGCTGATGTCCTGACCACTGGAGCTGGTAACCCAGTAGGAGACAAACTTAA TGTTATTACAGTAGGGCCCCGTGGGCCCCTTCTTGTTCAGGATGTGGTTTTCACTGATGAAATGGCTCATTTTGACCGAGAGAGAATTCC TGAGAGAGTTGTGCATGCTAAAGGAGCAGGGGCCTTTGGCTACTTTGAGGTCACACATGACATTACCAAATACTCCAAGGCAAAGGTATT TGAGCATATTGGAAAGAAGACTCCCATCGCAGTTCGGTTCTCCACTGTTGCTGGAGAATCGGGTTCAGCTGACACAGTTCGGGACCCTCG TGGGTTTGCAGTGAAATTTTACACAGAAGATGGTAACTGGGATCTCGTTGGAAATAACACCCCCATTTTCTTCATCAGGGATCCCATATT GTTTCCATCTTTTATCCACAGCCAAAAGAGAAATCCTCAGACACATCTGAAGGATCCGGACATGGTCTGGGACTTCTGGAGCCTACGTCC TGAGTCTCTGCATCAGGTTTCTTTCTTGTTCAGTGATCGGGGGATTCCAGATGGACATCGCCACATGAATGGATATGGATCACATACTTT CAAGCTGGTTAATGCAAATGGGGAGGCAGTTTATTGCAAATTCCATTATAAGACTGACCAGGGCATCAAAAACCTTTCTGTTGAAGATGC GGCGAGACTTTCCCAGGAAGATCCTGACTATGGCATCCGGGATCTTTTTAACGCCATTGCCACAGGAAAGTACCCCTCCTGGACTTTTTA CATCCAGGTCATGACATTTAATCAGGCAGAAACTTTTCCATTTAATCCATTCGATCTCACCAAGGTTTGGCCTCACAAGGACTACCCTCT CATCCCAGTTGGTAAACTGGTCTTAAACCGGAATCCAGTTAATTACTTTGCTGAGGTTGAACAGATAGCCTTCGACCCAAGCAACATGCC ACCTGGCATTGAGGCCAGTCCTGACAAAATGCTTCAGGGCCGCCTTTTTGCCTATCCTGACACTCACCGCCATCGCCTGGGACCCAATTA TCTTCATATACCTGTGAACTGTCCCTACCGTGCTCGAGTGGCCAACTACCAGCGTGACGGCCCGATGTGCATGCAGGACAATCAGGGTGG TGCTCCAAATTACTACCCCAACAGCTTTGGTGCTCCGGAACAACAGCCTTCTGCCCTGGAGCACAGCATCCAATATTCTGGAGAAGTGCG GAGATTCAACACTGCCAATGATGATAACGTTACTCAGGTGCGGGCATTCTATGTGAACGTGCTGAATGAGGAACAGAGGAAACGTCTGTG TGAGAACATTGCCGGCCACCTGAAGGATGCACAAATTTTCATCCAGAAGAAAGCGGTCAAGAACTTCACTGAGGTCCACCCTGACTACGG GAGCCACATCCAGGCTCTTCTGGACAAGTACAATGCTGAGAAGCCTAAGAATGCGATTCACACCTTTGTGCAGTCCGGATCTCACTTGGC GGCAAGGGAGAAGGCAAATCTGTGAGGCCGGGGCCCTGCACCTGTGCAGCGAAGCTTAGCGTTCATCCGTGTAACCCGCTCATCACTGGA TGAAGATTCTCCTGTGCTAGATGTGCAAATGCAAGCTAGTGGCTTCAAAATAGAGAATCCCACTTTCTATAGCAGATTGTGTAACAATTT TAATGCTATTTCCCCAGGGGAAAATGAAGGTTAGGATTTAACAGTCATTTAAAAAAAAAATTTGTTTTGACGGATGATTGGATTATTCAT TTAAAATGATTAGAAGGCAAGTTTCTAGCTAGAAATATGATTTTATTTGACAAAATTTGTTGAAATTATGTATGTTTACATATCACCTCA TGGCCTATTATATTAAAATATGGCTATAAATATATAAAAAGAAAAGATAAAGATGATCTACTCAGAAATTTTTATTTTTCTAAGGTTCTC ATAGGAAAAGTACATTTAATACAGCAGTGTCATCAGAAGATAACTTGAGCACCGTCATGGCTTAATGTTTATTCCTGATAATAATTGATC AAATTCATTTTTTTCACTGGAGTTACATTAATGTTAATTCAGCACTGATTTCACAACAGATCAATTTGTAATTGCTTACATTTTTACAAT >In-frame_ENST00000532820_ENST00000241052_TCGA-AC-A2BK-01A_CAPRIN1_chr11_34093534_+_CAT_chr11_34470739_length(amino acids)=689AA_start in transcript=25_stop in transcript=2094 MAGRARARALFLPSRRAAPPPPPARVGYRSLRVLSRVSPRPSPDWPLLSFLPLFLLSPCGLKMPSATSHSGSGSKSSGPPPPSGSSGSEA AAGAGAAAPASQHPATGTGAVQTEAMKQILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMA LSQDKADVLTTGAGNPVGDKLNVITVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKKTP IAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDPILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSF LFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQGIKNLSVEDAARLSQEDPDYGIRDLFNAIATGKYPSWTFYIQVMTFNQ AETFPFNPFDLTKVWPHKDYPLIPVGKLVLNRNPVNYFAEVEQIAFDPSNMPPGIEASPDKMLQGRLFAYPDTHRHRLGPNYLHIPVNCP YRARVANYQRDGPMCMQDNQGGAPNYYPNSFGAPEQQPSALEHSIQYSGEVRRFNTANDDNVTQVRAFYVNVLNEEQRKRLCENIAGHLK -------------------------------------------------------------- >In-frame_ENST00000530820_ENST00000241052_TCGA-AC-A2BK-01A_CAPRIN1_chr11_34093534_+_CAT_chr11_34470739_length(transcript)=2605nt_BP=458nt GCGTTTTGTCCCGCGTCTCGCCCCGTCCGTCTCCTGACTGGCCGCTCTTGTCCTTCCTCCCGCTTTTTCTTCTCTCTCCTTGCGGTCTGA AGATGCCCTCGGCCACCAGCCACAGCGGGAGCGGCAGCAAGTCGTCCGGACCGCCACCGCCGTCGGGTTCCTCCGGGAGTGAGGCGGCCG CGGGAGCCGGGGCCGCCGCGCCGGCTTCTCAGCACCCCGCAACCGGCACCGGCGCTGTCCAGACCGAGGCCATGAAGCAGATTCTCGGGG TGATCGACAAGAAACTTCGGAACCTGGAGAAGAAAAAGGGTAAGCTTGATGATTACCAGGAACGAATGAACAAAGGGGAAAGGCTTAATC AAGATCAGCTGGATGCCGTTTCTAAGTACCAGGAAGTCACAAATAATTTGGAGTTTGCAAAAGAATTACAGAGGAGTTTCATGGCACTAA GTCAAGATAAAGCTGATGTCCTGACCACTGGAGCTGGTAACCCAGTAGGAGACAAACTTAATGTTATTACAGTAGGGCCCCGTGGGCCCC TTCTTGTTCAGGATGTGGTTTTCACTGATGAAATGGCTCATTTTGACCGAGAGAGAATTCCTGAGAGAGTTGTGCATGCTAAAGGAGCAG GGGCCTTTGGCTACTTTGAGGTCACACATGACATTACCAAATACTCCAAGGCAAAGGTATTTGAGCATATTGGAAAGAAGACTCCCATCG CAGTTCGGTTCTCCACTGTTGCTGGAGAATCGGGTTCAGCTGACACAGTTCGGGACCCTCGTGGGTTTGCAGTGAAATTTTACACAGAAG ATGGTAACTGGGATCTCGTTGGAAATAACACCCCCATTTTCTTCATCAGGGATCCCATATTGTTTCCATCTTTTATCCACAGCCAAAAGA GAAATCCTCAGACACATCTGAAGGATCCGGACATGGTCTGGGACTTCTGGAGCCTACGTCCTGAGTCTCTGCATCAGGTTTCTTTCTTGT TCAGTGATCGGGGGATTCCAGATGGACATCGCCACATGAATGGATATGGATCACATACTTTCAAGCTGGTTAATGCAAATGGGGAGGCAG TTTATTGCAAATTCCATTATAAGACTGACCAGGGCATCAAAAACCTTTCTGTTGAAGATGCGGCGAGACTTTCCCAGGAAGATCCTGACT ATGGCATCCGGGATCTTTTTAACGCCATTGCCACAGGAAAGTACCCCTCCTGGACTTTTTACATCCAGGTCATGACATTTAATCAGGCAG AAACTTTTCCATTTAATCCATTCGATCTCACCAAGGTTTGGCCTCACAAGGACTACCCTCTCATCCCAGTTGGTAAACTGGTCTTAAACC GGAATCCAGTTAATTACTTTGCTGAGGTTGAACAGATAGCCTTCGACCCAAGCAACATGCCACCTGGCATTGAGGCCAGTCCTGACAAAA TGCTTCAGGGCCGCCTTTTTGCCTATCCTGACACTCACCGCCATCGCCTGGGACCCAATTATCTTCATATACCTGTGAACTGTCCCTACC GTGCTCGAGTGGCCAACTACCAGCGTGACGGCCCGATGTGCATGCAGGACAATCAGGGTGGTGCTCCAAATTACTACCCCAACAGCTTTG GTGCTCCGGAACAACAGCCTTCTGCCCTGGAGCACAGCATCCAATATTCTGGAGAAGTGCGGAGATTCAACACTGCCAATGATGATAACG TTACTCAGGTGCGGGCATTCTATGTGAACGTGCTGAATGAGGAACAGAGGAAACGTCTGTGTGAGAACATTGCCGGCCACCTGAAGGATG CACAAATTTTCATCCAGAAGAAAGCGGTCAAGAACTTCACTGAGGTCCACCCTGACTACGGGAGCCACATCCAGGCTCTTCTGGACAAGT ACAATGCTGAGAAGCCTAAGAATGCGATTCACACCTTTGTGCAGTCCGGATCTCACTTGGCGGCAAGGGAGAAGGCAAATCTGTGAGGCC GGGGCCCTGCACCTGTGCAGCGAAGCTTAGCGTTCATCCGTGTAACCCGCTCATCACTGGATGAAGATTCTCCTGTGCTAGATGTGCAAA TGCAAGCTAGTGGCTTCAAAATAGAGAATCCCACTTTCTATAGCAGATTGTGTAACAATTTTAATGCTATTTCCCCAGGGGAAAATGAAG GTTAGGATTTAACAGTCATTTAAAAAAAAAATTTGTTTTGACGGATGATTGGATTATTCATTTAAAATGATTAGAAGGCAAGTTTCTAGC TAGAAATATGATTTTATTTGACAAAATTTGTTGAAATTATGTATGTTTACATATCACCTCATGGCCTATTATATTAAAATATGGCTATAA ATATATAAAAAGAAAAGATAAAGATGATCTACTCAGAAATTTTTATTTTTCTAAGGTTCTCATAGGAAAAGTACATTTAATACAGCAGTG TCATCAGAAGATAACTTGAGCACCGTCATGGCTTAATGTTTATTCCTGATAATAATTGATCAAATTCATTTTTTTCACTGGAGTTACATT >In-frame_ENST00000530820_ENST00000241052_TCGA-AC-A2BK-01A_CAPRIN1_chr11_34093534_+_CAT_chr11_34470739_length(amino acids)=656AA_start in transcript=5_stop in transcript=1975 MSRVSPRPSPDWPLLSFLPLFLLSPCGLKMPSATSHSGSGSKSSGPPPPSGSSGSEAAAGAGAAAPASQHPATGTGAVQTEAMKQILGVI DKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDKADVLTTGAGNPVGDKLNVITVGPRGPLL VQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDG NWDLVGNNTPIFFIRDPILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVY CKFHYKTDQGIKNLSVEDAARLSQEDPDYGIRDLFNAIATGKYPSWTFYIQVMTFNQAETFPFNPFDLTKVWPHKDYPLIPVGKLVLNRN PVNYFAEVEQIAFDPSNMPPGIEASPDKMLQGRLFAYPDTHRHRLGPNYLHIPVNCPYRARVANYQRDGPMCMQDNQGGAPNYYPNSFGA PEQQPSALEHSIQYSGEVRRFNTANDDNVTQVRAFYVNVLNEEQRKRLCENIAGHLKDAQIFIQKKAVKNFTEVHPDYGSHIQALLDKYN -------------------------------------------------------------- >In-frame_ENST00000529307_ENST00000241052_TCGA-AC-A2BK-01A_CAPRIN1_chr11_34093534_+_CAT_chr11_34470739_length(transcript)=2502nt_BP=355nt GTCTCTGAGGCCCGATTTCTCTGACGAGGGCCCAAAATGAAGAGGTCCCTGCGCGGGGGGCTCCGGGTTCAACCGACCGCCTCGTGGAGT TGGGGCGGCCTGCGTCCTGCAGCCTTGGGGTCTGTCCGCTCGGTTACCATGCACTCGAGACCTGTCGAGCGTCCCCTCTTCTTCCGTAGG AGAGAAGTGTGTTTAGAATCTTAAGGGTAAGCTTGATGATTACCAGGAACGAATGAACAAAGGGGAAAGGCTTAATCAAGATCAGCTGGA TGCCGTTTCTAAGTACCAGGAAGTCACAAATAATTTGGAGTTTGCAAAAGAATTACAGAGGAGTTTCATGGCACTAAGTCAAGATAAAGC TGATGTCCTGACCACTGGAGCTGGTAACCCAGTAGGAGACAAACTTAATGTTATTACAGTAGGGCCCCGTGGGCCCCTTCTTGTTCAGGA TGTGGTTTTCACTGATGAAATGGCTCATTTTGACCGAGAGAGAATTCCTGAGAGAGTTGTGCATGCTAAAGGAGCAGGGGCCTTTGGCTA CTTTGAGGTCACACATGACATTACCAAATACTCCAAGGCAAAGGTATTTGAGCATATTGGAAAGAAGACTCCCATCGCAGTTCGGTTCTC CACTGTTGCTGGAGAATCGGGTTCAGCTGACACAGTTCGGGACCCTCGTGGGTTTGCAGTGAAATTTTACACAGAAGATGGTAACTGGGA TCTCGTTGGAAATAACACCCCCATTTTCTTCATCAGGGATCCCATATTGTTTCCATCTTTTATCCACAGCCAAAAGAGAAATCCTCAGAC ACATCTGAAGGATCCGGACATGGTCTGGGACTTCTGGAGCCTACGTCCTGAGTCTCTGCATCAGGTTTCTTTCTTGTTCAGTGATCGGGG GATTCCAGATGGACATCGCCACATGAATGGATATGGATCACATACTTTCAAGCTGGTTAATGCAAATGGGGAGGCAGTTTATTGCAAATT CCATTATAAGACTGACCAGGGCATCAAAAACCTTTCTGTTGAAGATGCGGCGAGACTTTCCCAGGAAGATCCTGACTATGGCATCCGGGA TCTTTTTAACGCCATTGCCACAGGAAAGTACCCCTCCTGGACTTTTTACATCCAGGTCATGACATTTAATCAGGCAGAAACTTTTCCATT TAATCCATTCGATCTCACCAAGGTTTGGCCTCACAAGGACTACCCTCTCATCCCAGTTGGTAAACTGGTCTTAAACCGGAATCCAGTTAA TTACTTTGCTGAGGTTGAACAGATAGCCTTCGACCCAAGCAACATGCCACCTGGCATTGAGGCCAGTCCTGACAAAATGCTTCAGGGCCG CCTTTTTGCCTATCCTGACACTCACCGCCATCGCCTGGGACCCAATTATCTTCATATACCTGTGAACTGTCCCTACCGTGCTCGAGTGGC CAACTACCAGCGTGACGGCCCGATGTGCATGCAGGACAATCAGGGTGGTGCTCCAAATTACTACCCCAACAGCTTTGGTGCTCCGGAACA ACAGCCTTCTGCCCTGGAGCACAGCATCCAATATTCTGGAGAAGTGCGGAGATTCAACACTGCCAATGATGATAACGTTACTCAGGTGCG GGCATTCTATGTGAACGTGCTGAATGAGGAACAGAGGAAACGTCTGTGTGAGAACATTGCCGGCCACCTGAAGGATGCACAAATTTTCAT CCAGAAGAAAGCGGTCAAGAACTTCACTGAGGTCCACCCTGACTACGGGAGCCACATCCAGGCTCTTCTGGACAAGTACAATGCTGAGAA GCCTAAGAATGCGATTCACACCTTTGTGCAGTCCGGATCTCACTTGGCGGCAAGGGAGAAGGCAAATCTGTGAGGCCGGGGCCCTGCACC TGTGCAGCGAAGCTTAGCGTTCATCCGTGTAACCCGCTCATCACTGGATGAAGATTCTCCTGTGCTAGATGTGCAAATGCAAGCTAGTGG CTTCAAAATAGAGAATCCCACTTTCTATAGCAGATTGTGTAACAATTTTAATGCTATTTCCCCAGGGGAAAATGAAGGTTAGGATTTAAC AGTCATTTAAAAAAAAAATTTGTTTTGACGGATGATTGGATTATTCATTTAAAATGATTAGAAGGCAAGTTTCTAGCTAGAAATATGATT TTATTTGACAAAATTTGTTGAAATTATGTATGTTTACATATCACCTCATGGCCTATTATATTAAAATATGGCTATAAATATATAAAAAGA AAAGATAAAGATGATCTACTCAGAAATTTTTATTTTTCTAAGGTTCTCATAGGAAAAGTACATTTAATACAGCAGTGTCATCAGAAGATA ACTTGAGCACCGTCATGGCTTAATGTTTATTCCTGATAATAATTGATCAAATTCATTTTTTTCACTGGAGTTACATTAATGTTAATTCAG >In-frame_ENST00000529307_ENST00000241052_TCGA-AC-A2BK-01A_CAPRIN1_chr11_34093534_+_CAT_chr11_34470739_length(amino acids)=546AA_start in transcript=232_stop in transcript=1872 MNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDKADVLTTGAGNPVGDKLNVITVGPRGPLLVQDVVFTDEMAHFDRERIPE RVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDPILF PSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQGIKNLSVEDAA RLSQEDPDYGIRDLFNAIATGKYPSWTFYIQVMTFNQAETFPFNPFDLTKVWPHKDYPLIPVGKLVLNRNPVNYFAEVEQIAFDPSNMPP GIEASPDKMLQGRLFAYPDTHRHRLGPNYLHIPVNCPYRARVANYQRDGPMCMQDNQGGAPNYYPNSFGAPEQQPSALEHSIQYSGEVRR FNTANDDNVTQVRAFYVNVLNEEQRKRLCENIAGHLKDAQIFIQKKAVKNFTEVHPDYGSHIQALLDKYNAEKPKNAIHTFVQSGSHLAA -------------------------------------------------------------- >In-frame_ENST00000341394_ENST00000241052_TCGA-AC-A2BK_CAPRIN1_chr11_34093534_+_CAT_chr11_34470738_length(transcript)=2702nt_BP=555nt CAGAGGGCTGCTGGCTGGCTAAGTCCCTCCCGCTCCCGGCTCTCGCCTCACTAGGAGCGGCTCTCGGTGCAGCGGGACAGGGCGAAGCGG CCTGCGCCCACGGAGCGCGCGACACTGCCCGGAAGGGACCACCACCCTTGCCCCCTCAGCTGCCCACTCGTGATTTCCAGCGGCCTCCGC GCGCGCACGATGCCCTCGGCCACCAGCCACAGCGGGAGCGGCAGCAAGTCGTCCGGACCGCCACCGCCGTCGGGTTCCTCCGGGAGTGAG GCGGCCGCGGGAGCCGGGGCCGCCGCGCCGGCTTCTCAGCACCCCGCAACCGGCACCGGCGCTGTCCAGACCGAGGCCATGAAGCAGATT CTCGGGGTGATCGACAAGAAACTTCGGAACCTGGAGAAGAAAAAGGGTAAGCTTGATGATTACCAGGAACGAATGAACAAAGGGGAAAGG CTTAATCAAGATCAGCTGGATGCCGTTTCTAAGTACCAGGAAGTCACAAATAATTTGGAGTTTGCAAAAGAATTACAGAGGAGTTTCATG GCACTAAGTCAAGATAAAGCTGATGTCCTGACCACTGGAGCTGGTAACCCAGTAGGAGACAAACTTAATGTTATTACAGTAGGGCCCCGT GGGCCCCTTCTTGTTCAGGATGTGGTTTTCACTGATGAAATGGCTCATTTTGACCGAGAGAGAATTCCTGAGAGAGTTGTGCATGCTAAA GGAGCAGGGGCCTTTGGCTACTTTGAGGTCACACATGACATTACCAAATACTCCAAGGCAAAGGTATTTGAGCATATTGGAAAGAAGACT CCCATCGCAGTTCGGTTCTCCACTGTTGCTGGAGAATCGGGTTCAGCTGACACAGTTCGGGACCCTCGTGGGTTTGCAGTGAAATTTTAC ACAGAAGATGGTAACTGGGATCTCGTTGGAAATAACACCCCCATTTTCTTCATCAGGGATCCCATATTGTTTCCATCTTTTATCCACAGC CAAAAGAGAAATCCTCAGACACATCTGAAGGATCCGGACATGGTCTGGGACTTCTGGAGCCTACGTCCTGAGTCTCTGCATCAGGTTTCT TTCTTGTTCAGTGATCGGGGGATTCCAGATGGACATCGCCACATGAATGGATATGGATCACATACTTTCAAGCTGGTTAATGCAAATGGG GAGGCAGTTTATTGCAAATTCCATTATAAGACTGACCAGGGCATCAAAAACCTTTCTGTTGAAGATGCGGCGAGACTTTCCCAGGAAGAT CCTGACTATGGCATCCGGGATCTTTTTAACGCCATTGCCACAGGAAAGTACCCCTCCTGGACTTTTTACATCCAGGTCATGACATTTAAT CAGGCAGAAACTTTTCCATTTAATCCATTCGATCTCACCAAGGTTTGGCCTCACAAGGACTACCCTCTCATCCCAGTTGGTAAACTGGTC TTAAACCGGAATCCAGTTAATTACTTTGCTGAGGTTGAACAGATAGCCTTCGACCCAAGCAACATGCCACCTGGCATTGAGGCCAGTCCT GACAAAATGCTTCAGGGCCGCCTTTTTGCCTATCCTGACACTCACCGCCATCGCCTGGGACCCAATTATCTTCATATACCTGTGAACTGT CCCTACCGTGCTCGAGTGGCCAACTACCAGCGTGACGGCCCGATGTGCATGCAGGACAATCAGGGTGGTGCTCCAAATTACTACCCCAAC AGCTTTGGTGCTCCGGAACAACAGCCTTCTGCCCTGGAGCACAGCATCCAATATTCTGGAGAAGTGCGGAGATTCAACACTGCCAATGAT GATAACGTTACTCAGGTGCGGGCATTCTATGTGAACGTGCTGAATGAGGAACAGAGGAAACGTCTGTGTGAGAACATTGCCGGCCACCTG AAGGATGCACAAATTTTCATCCAGAAGAAAGCGGTCAAGAACTTCACTGAGGTCCACCCTGACTACGGGAGCCACATCCAGGCTCTTCTG GACAAGTACAATGCTGAGAAGCCTAAGAATGCGATTCACACCTTTGTGCAGTCCGGATCTCACTTGGCGGCAAGGGAGAAGGCAAATCTG TGAGGCCGGGGCCCTGCACCTGTGCAGCGAAGCTTAGCGTTCATCCGTGTAACCCGCTCATCACTGGATGAAGATTCTCCTGTGCTAGAT GTGCAAATGCAAGCTAGTGGCTTCAAAATAGAGAATCCCACTTTCTATAGCAGATTGTGTAACAATTTTAATGCTATTTCCCCAGGGGAA AATGAAGGTTAGGATTTAACAGTCATTTAAAAAAAAAATTTGTTTTGACGGATGATTGGATTATTCATTTAAAATGATTAGAAGGCAAGT TTCTAGCTAGAAATATGATTTTATTTGACAAAATTTGTTGAAATTATGTATGTTTACATATCACCTCATGGCCTATTATATTAAAATATG GCTATAAATATATAAAAAGAAAAGATAAAGATGATCTACTCAGAAATTTTTATTTTTCTAAGGTTCTCATAGGAAAAGTACATTTAATAC AGCAGTGTCATCAGAAGATAACTTGAGCACCGTCATGGCTTAATGTTTATTCCTGATAATAATTGATCAAATTCATTTTTTTCACTGGAG TTACATTAATGTTAATTCAGCACTGATTTCACAACAGATCAATTTGTAATTGCTTACATTTTTACAATAAATAATCTGTACGTAAGAACA >In-frame_ENST00000341394_ENST00000241052_TCGA-AC-A2BK_CAPRIN1_chr11_34093534_+_CAT_chr11_34470738_length(amino acids)=652AA_start in transcript=114_stop in transcript=2072 MPGRDHHPCPLSCPLVISSGLRARTMPSATSHSGSGSKSSGPPPPSGSSGSEAAAGAGAAAPASQHPATGTGAVQTEAMKQILGVIDKKL RNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDKADVLTTGAGNPVGDKLNVITVGPRGPLLVQDV VFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDL VGNNTPIFFIRDPILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFH YKTDQGIKNLSVEDAARLSQEDPDYGIRDLFNAIATGKYPSWTFYIQVMTFNQAETFPFNPFDLTKVWPHKDYPLIPVGKLVLNRNPVNY FAEVEQIAFDPSNMPPGIEASPDKMLQGRLFAYPDTHRHRLGPNYLHIPVNCPYRARVANYQRDGPMCMQDNQGGAPNYYPNSFGAPEQQ PSALEHSIQYSGEVRRFNTANDDNVTQVRAFYVNVLNEEQRKRLCENIAGHLKDAQIFIQKKAVKNFTEVHPDYGSHIQALLDKYNAEKP -------------------------------------------------------------- >In-frame_ENST00000389645_ENST00000241052_TCGA-AC-A2BK_CAPRIN1_chr11_34093534_+_CAT_chr11_34470738_length(transcript)=2653nt_BP=506nt ACTAGGAGCGGCTCTCGGTGCAGCGGGACAGGGCGAAGCGGCCTGCGCCCACGGAGCGCGCGACACTGCCCGGAAGGGACCACCACCCTT GCCCCCTCAGCTGCCCACTCGTGATTTCCAGCGGCCTCCGCGCGCGCACGATGCCCTCGGCCACCAGCCACAGCGGGAGCGGCAGCAAGT CGTCCGGACCGCCACCGCCGTCGGGTTCCTCCGGGAGTGAGGCGGCCGCGGGAGCCGGGGCCGCCGCGCCGGCTTCTCAGCACCCCGCAA CCGGCACCGGCGCTGTCCAGACCGAGGCCATGAAGCAGATTCTCGGGGTGATCGACAAGAAACTTCGGAACCTGGAGAAGAAAAAGGGTA AGCTTGATGATTACCAGGAACGAATGAACAAAGGGGAAAGGCTTAATCAAGATCAGCTGGATGCCGTTTCTAAGTACCAGGAAGTCACAA ATAATTTGGAGTTTGCAAAAGAATTACAGAGGAGTTTCATGGCACTAAGTCAAGATAAAGCTGATGTCCTGACCACTGGAGCTGGTAACC CAGTAGGAGACAAACTTAATGTTATTACAGTAGGGCCCCGTGGGCCCCTTCTTGTTCAGGATGTGGTTTTCACTGATGAAATGGCTCATT TTGACCGAGAGAGAATTCCTGAGAGAGTTGTGCATGCTAAAGGAGCAGGGGCCTTTGGCTACTTTGAGGTCACACATGACATTACCAAAT ACTCCAAGGCAAAGGTATTTGAGCATATTGGAAAGAAGACTCCCATCGCAGTTCGGTTCTCCACTGTTGCTGGAGAATCGGGTTCAGCTG ACACAGTTCGGGACCCTCGTGGGTTTGCAGTGAAATTTTACACAGAAGATGGTAACTGGGATCTCGTTGGAAATAACACCCCCATTTTCT TCATCAGGGATCCCATATTGTTTCCATCTTTTATCCACAGCCAAAAGAGAAATCCTCAGACACATCTGAAGGATCCGGACATGGTCTGGG ACTTCTGGAGCCTACGTCCTGAGTCTCTGCATCAGGTTTCTTTCTTGTTCAGTGATCGGGGGATTCCAGATGGACATCGCCACATGAATG GATATGGATCACATACTTTCAAGCTGGTTAATGCAAATGGGGAGGCAGTTTATTGCAAATTCCATTATAAGACTGACCAGGGCATCAAAA ACCTTTCTGTTGAAGATGCGGCGAGACTTTCCCAGGAAGATCCTGACTATGGCATCCGGGATCTTTTTAACGCCATTGCCACAGGAAAGT ACCCCTCCTGGACTTTTTACATCCAGGTCATGACATTTAATCAGGCAGAAACTTTTCCATTTAATCCATTCGATCTCACCAAGGTTTGGC CTCACAAGGACTACCCTCTCATCCCAGTTGGTAAACTGGTCTTAAACCGGAATCCAGTTAATTACTTTGCTGAGGTTGAACAGATAGCCT TCGACCCAAGCAACATGCCACCTGGCATTGAGGCCAGTCCTGACAAAATGCTTCAGGGCCGCCTTTTTGCCTATCCTGACACTCACCGCC ATCGCCTGGGACCCAATTATCTTCATATACCTGTGAACTGTCCCTACCGTGCTCGAGTGGCCAACTACCAGCGTGACGGCCCGATGTGCA TGCAGGACAATCAGGGTGGTGCTCCAAATTACTACCCCAACAGCTTTGGTGCTCCGGAACAACAGCCTTCTGCCCTGGAGCACAGCATCC AATATTCTGGAGAAGTGCGGAGATTCAACACTGCCAATGATGATAACGTTACTCAGGTGCGGGCATTCTATGTGAACGTGCTGAATGAGG AACAGAGGAAACGTCTGTGTGAGAACATTGCCGGCCACCTGAAGGATGCACAAATTTTCATCCAGAAGAAAGCGGTCAAGAACTTCACTG AGGTCCACCCTGACTACGGGAGCCACATCCAGGCTCTTCTGGACAAGTACAATGCTGAGAAGCCTAAGAATGCGATTCACACCTTTGTGC AGTCCGGATCTCACTTGGCGGCAAGGGAGAAGGCAAATCTGTGAGGCCGGGGCCCTGCACCTGTGCAGCGAAGCTTAGCGTTCATCCGTG TAACCCGCTCATCACTGGATGAAGATTCTCCTGTGCTAGATGTGCAAATGCAAGCTAGTGGCTTCAAAATAGAGAATCCCACTTTCTATA GCAGATTGTGTAACAATTTTAATGCTATTTCCCCAGGGGAAAATGAAGGTTAGGATTTAACAGTCATTTAAAAAAAAAATTTGTTTTGAC GGATGATTGGATTATTCATTTAAAATGATTAGAAGGCAAGTTTCTAGCTAGAAATATGATTTTATTTGACAAAATTTGTTGAAATTATGT ATGTTTACATATCACCTCATGGCCTATTATATTAAAATATGGCTATAAATATATAAAAAGAAAAGATAAAGATGATCTACTCAGAAATTT TTATTTTTCTAAGGTTCTCATAGGAAAAGTACATTTAATACAGCAGTGTCATCAGAAGATAACTTGAGCACCGTCATGGCTTAATGTTTA TTCCTGATAATAATTGATCAAATTCATTTTTTTCACTGGAGTTACATTAATGTTAATTCAGCACTGATTTCACAACAGATCAATTTGTAA >In-frame_ENST00000389645_ENST00000241052_TCGA-AC-A2BK_CAPRIN1_chr11_34093534_+_CAT_chr11_34470738_length(amino acids)=652AA_start in transcript=65_stop in transcript=2023 MPGRDHHPCPLSCPLVISSGLRARTMPSATSHSGSGSKSSGPPPPSGSSGSEAAAGAGAAAPASQHPATGTGAVQTEAMKQILGVIDKKL RNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDKADVLTTGAGNPVGDKLNVITVGPRGPLLVQDV VFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDL VGNNTPIFFIRDPILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFH YKTDQGIKNLSVEDAARLSQEDPDYGIRDLFNAIATGKYPSWTFYIQVMTFNQAETFPFNPFDLTKVWPHKDYPLIPVGKLVLNRNPVNY FAEVEQIAFDPSNMPPGIEASPDKMLQGRLFAYPDTHRHRLGPNYLHIPVNCPYRARVANYQRDGPMCMQDNQGGAPNYYPNSFGAPEQQ PSALEHSIQYSGEVRRFNTANDDNVTQVRAFYVNVLNEEQRKRLCENIAGHLKDAQIFIQKKAVKNFTEVHPDYGSHIQALLDKYNAEKP -------------------------------------------------------------- >In-frame_ENST00000532820_ENST00000241052_TCGA-AC-A2BK_CAPRIN1_chr11_34093534_+_CAT_chr11_34470738_length(transcript)=2724nt_BP=577nt GTGCGAGGCCCAGCCGGGCGCCCCGCTGGCGGGTCGCGCGCGCGCCCGCGCACTCTTCCTGCCCTCGAGGCGCGCCGCGCCCCCTCCCCC ACCCGCTCGCGTAGGCTACCGCTCGCTGCGCGTTTTGTCCCGCGTCTCGCCCCGTCCGTCTCCTGACTGGCCGCTCTTGTCCTTCCTCCC GCTTTTTCTTCTCTCTCCTTGCGGTCTGAAGATGCCCTCGGCCACCAGCCACAGCGGGAGCGGCAGCAAGTCGTCCGGACCGCCACCGCC GTCGGGTTCCTCCGGGAGTGAGGCGGCCGCGGGAGCCGGGGCCGCCGCGCCGGCTTCTCAGCACCCCGCAACCGGCACCGGCGCTGTCCA GACCGAGGCCATGAAGCAGATTCTCGGGGTGATCGACAAGAAACTTCGGAACCTGGAGAAGAAAAAGGGTAAGCTTGATGATTACCAGGA ACGAATGAACAAAGGGGAAAGGCTTAATCAAGATCAGCTGGATGCCGTTTCTAAGTACCAGGAAGTCACAAATAATTTGGAGTTTGCAAA AGAATTACAGAGGAGTTTCATGGCACTAAGTCAAGATAAAGCTGATGTCCTGACCACTGGAGCTGGTAACCCAGTAGGAGACAAACTTAA TGTTATTACAGTAGGGCCCCGTGGGCCCCTTCTTGTTCAGGATGTGGTTTTCACTGATGAAATGGCTCATTTTGACCGAGAGAGAATTCC TGAGAGAGTTGTGCATGCTAAAGGAGCAGGGGCCTTTGGCTACTTTGAGGTCACACATGACATTACCAAATACTCCAAGGCAAAGGTATT TGAGCATATTGGAAAGAAGACTCCCATCGCAGTTCGGTTCTCCACTGTTGCTGGAGAATCGGGTTCAGCTGACACAGTTCGGGACCCTCG TGGGTTTGCAGTGAAATTTTACACAGAAGATGGTAACTGGGATCTCGTTGGAAATAACACCCCCATTTTCTTCATCAGGGATCCCATATT GTTTCCATCTTTTATCCACAGCCAAAAGAGAAATCCTCAGACACATCTGAAGGATCCGGACATGGTCTGGGACTTCTGGAGCCTACGTCC TGAGTCTCTGCATCAGGTTTCTTTCTTGTTCAGTGATCGGGGGATTCCAGATGGACATCGCCACATGAATGGATATGGATCACATACTTT CAAGCTGGTTAATGCAAATGGGGAGGCAGTTTATTGCAAATTCCATTATAAGACTGACCAGGGCATCAAAAACCTTTCTGTTGAAGATGC GGCGAGACTTTCCCAGGAAGATCCTGACTATGGCATCCGGGATCTTTTTAACGCCATTGCCACAGGAAAGTACCCCTCCTGGACTTTTTA CATCCAGGTCATGACATTTAATCAGGCAGAAACTTTTCCATTTAATCCATTCGATCTCACCAAGGTTTGGCCTCACAAGGACTACCCTCT CATCCCAGTTGGTAAACTGGTCTTAAACCGGAATCCAGTTAATTACTTTGCTGAGGTTGAACAGATAGCCTTCGACCCAAGCAACATGCC ACCTGGCATTGAGGCCAGTCCTGACAAAATGCTTCAGGGCCGCCTTTTTGCCTATCCTGACACTCACCGCCATCGCCTGGGACCCAATTA TCTTCATATACCTGTGAACTGTCCCTACCGTGCTCGAGTGGCCAACTACCAGCGTGACGGCCCGATGTGCATGCAGGACAATCAGGGTGG TGCTCCAAATTACTACCCCAACAGCTTTGGTGCTCCGGAACAACAGCCTTCTGCCCTGGAGCACAGCATCCAATATTCTGGAGAAGTGCG GAGATTCAACACTGCCAATGATGATAACGTTACTCAGGTGCGGGCATTCTATGTGAACGTGCTGAATGAGGAACAGAGGAAACGTCTGTG TGAGAACATTGCCGGCCACCTGAAGGATGCACAAATTTTCATCCAGAAGAAAGCGGTCAAGAACTTCACTGAGGTCCACCCTGACTACGG GAGCCACATCCAGGCTCTTCTGGACAAGTACAATGCTGAGAAGCCTAAGAATGCGATTCACACCTTTGTGCAGTCCGGATCTCACTTGGC GGCAAGGGAGAAGGCAAATCTGTGAGGCCGGGGCCCTGCACCTGTGCAGCGAAGCTTAGCGTTCATCCGTGTAACCCGCTCATCACTGGA TGAAGATTCTCCTGTGCTAGATGTGCAAATGCAAGCTAGTGGCTTCAAAATAGAGAATCCCACTTTCTATAGCAGATTGTGTAACAATTT TAATGCTATTTCCCCAGGGGAAAATGAAGGTTAGGATTTAACAGTCATTTAAAAAAAAAATTTGTTTTGACGGATGATTGGATTATTCAT TTAAAATGATTAGAAGGCAAGTTTCTAGCTAGAAATATGATTTTATTTGACAAAATTTGTTGAAATTATGTATGTTTACATATCACCTCA TGGCCTATTATATTAAAATATGGCTATAAATATATAAAAAGAAAAGATAAAGATGATCTACTCAGAAATTTTTATTTTTCTAAGGTTCTC ATAGGAAAAGTACATTTAATACAGCAGTGTCATCAGAAGATAACTTGAGCACCGTCATGGCTTAATGTTTATTCCTGATAATAATTGATC AAATTCATTTTTTTCACTGGAGTTACATTAATGTTAATTCAGCACTGATTTCACAACAGATCAATTTGTAATTGCTTACATTTTTACAAT >In-frame_ENST00000532820_ENST00000241052_TCGA-AC-A2BK_CAPRIN1_chr11_34093534_+_CAT_chr11_34470738_length(amino acids)=689AA_start in transcript=25_stop in transcript=2094 MAGRARARALFLPSRRAAPPPPPARVGYRSLRVLSRVSPRPSPDWPLLSFLPLFLLSPCGLKMPSATSHSGSGSKSSGPPPPSGSSGSEA AAGAGAAAPASQHPATGTGAVQTEAMKQILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMA LSQDKADVLTTGAGNPVGDKLNVITVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKKTP IAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDPILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSF LFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQGIKNLSVEDAARLSQEDPDYGIRDLFNAIATGKYPSWTFYIQVMTFNQ AETFPFNPFDLTKVWPHKDYPLIPVGKLVLNRNPVNYFAEVEQIAFDPSNMPPGIEASPDKMLQGRLFAYPDTHRHRLGPNYLHIPVNCP YRARVANYQRDGPMCMQDNQGGAPNYYPNSFGAPEQQPSALEHSIQYSGEVRRFNTANDDNVTQVRAFYVNVLNEEQRKRLCENIAGHLK -------------------------------------------------------------- >In-frame_ENST00000530820_ENST00000241052_TCGA-AC-A2BK_CAPRIN1_chr11_34093534_+_CAT_chr11_34470738_length(transcript)=2605nt_BP=458nt GCGTTTTGTCCCGCGTCTCGCCCCGTCCGTCTCCTGACTGGCCGCTCTTGTCCTTCCTCCCGCTTTTTCTTCTCTCTCCTTGCGGTCTGA AGATGCCCTCGGCCACCAGCCACAGCGGGAGCGGCAGCAAGTCGTCCGGACCGCCACCGCCGTCGGGTTCCTCCGGGAGTGAGGCGGCCG CGGGAGCCGGGGCCGCCGCGCCGGCTTCTCAGCACCCCGCAACCGGCACCGGCGCTGTCCAGACCGAGGCCATGAAGCAGATTCTCGGGG TGATCGACAAGAAACTTCGGAACCTGGAGAAGAAAAAGGGTAAGCTTGATGATTACCAGGAACGAATGAACAAAGGGGAAAGGCTTAATC AAGATCAGCTGGATGCCGTTTCTAAGTACCAGGAAGTCACAAATAATTTGGAGTTTGCAAAAGAATTACAGAGGAGTTTCATGGCACTAA GTCAAGATAAAGCTGATGTCCTGACCACTGGAGCTGGTAACCCAGTAGGAGACAAACTTAATGTTATTACAGTAGGGCCCCGTGGGCCCC TTCTTGTTCAGGATGTGGTTTTCACTGATGAAATGGCTCATTTTGACCGAGAGAGAATTCCTGAGAGAGTTGTGCATGCTAAAGGAGCAG GGGCCTTTGGCTACTTTGAGGTCACACATGACATTACCAAATACTCCAAGGCAAAGGTATTTGAGCATATTGGAAAGAAGACTCCCATCG CAGTTCGGTTCTCCACTGTTGCTGGAGAATCGGGTTCAGCTGACACAGTTCGGGACCCTCGTGGGTTTGCAGTGAAATTTTACACAGAAG ATGGTAACTGGGATCTCGTTGGAAATAACACCCCCATTTTCTTCATCAGGGATCCCATATTGTTTCCATCTTTTATCCACAGCCAAAAGA GAAATCCTCAGACACATCTGAAGGATCCGGACATGGTCTGGGACTTCTGGAGCCTACGTCCTGAGTCTCTGCATCAGGTTTCTTTCTTGT TCAGTGATCGGGGGATTCCAGATGGACATCGCCACATGAATGGATATGGATCACATACTTTCAAGCTGGTTAATGCAAATGGGGAGGCAG TTTATTGCAAATTCCATTATAAGACTGACCAGGGCATCAAAAACCTTTCTGTTGAAGATGCGGCGAGACTTTCCCAGGAAGATCCTGACT ATGGCATCCGGGATCTTTTTAACGCCATTGCCACAGGAAAGTACCCCTCCTGGACTTTTTACATCCAGGTCATGACATTTAATCAGGCAG AAACTTTTCCATTTAATCCATTCGATCTCACCAAGGTTTGGCCTCACAAGGACTACCCTCTCATCCCAGTTGGTAAACTGGTCTTAAACC GGAATCCAGTTAATTACTTTGCTGAGGTTGAACAGATAGCCTTCGACCCAAGCAACATGCCACCTGGCATTGAGGCCAGTCCTGACAAAA TGCTTCAGGGCCGCCTTTTTGCCTATCCTGACACTCACCGCCATCGCCTGGGACCCAATTATCTTCATATACCTGTGAACTGTCCCTACC GTGCTCGAGTGGCCAACTACCAGCGTGACGGCCCGATGTGCATGCAGGACAATCAGGGTGGTGCTCCAAATTACTACCCCAACAGCTTTG GTGCTCCGGAACAACAGCCTTCTGCCCTGGAGCACAGCATCCAATATTCTGGAGAAGTGCGGAGATTCAACACTGCCAATGATGATAACG TTACTCAGGTGCGGGCATTCTATGTGAACGTGCTGAATGAGGAACAGAGGAAACGTCTGTGTGAGAACATTGCCGGCCACCTGAAGGATG CACAAATTTTCATCCAGAAGAAAGCGGTCAAGAACTTCACTGAGGTCCACCCTGACTACGGGAGCCACATCCAGGCTCTTCTGGACAAGT ACAATGCTGAGAAGCCTAAGAATGCGATTCACACCTTTGTGCAGTCCGGATCTCACTTGGCGGCAAGGGAGAAGGCAAATCTGTGAGGCC GGGGCCCTGCACCTGTGCAGCGAAGCTTAGCGTTCATCCGTGTAACCCGCTCATCACTGGATGAAGATTCTCCTGTGCTAGATGTGCAAA TGCAAGCTAGTGGCTTCAAAATAGAGAATCCCACTTTCTATAGCAGATTGTGTAACAATTTTAATGCTATTTCCCCAGGGGAAAATGAAG GTTAGGATTTAACAGTCATTTAAAAAAAAAATTTGTTTTGACGGATGATTGGATTATTCATTTAAAATGATTAGAAGGCAAGTTTCTAGC TAGAAATATGATTTTATTTGACAAAATTTGTTGAAATTATGTATGTTTACATATCACCTCATGGCCTATTATATTAAAATATGGCTATAA ATATATAAAAAGAAAAGATAAAGATGATCTACTCAGAAATTTTTATTTTTCTAAGGTTCTCATAGGAAAAGTACATTTAATACAGCAGTG TCATCAGAAGATAACTTGAGCACCGTCATGGCTTAATGTTTATTCCTGATAATAATTGATCAAATTCATTTTTTTCACTGGAGTTACATT >In-frame_ENST00000530820_ENST00000241052_TCGA-AC-A2BK_CAPRIN1_chr11_34093534_+_CAT_chr11_34470738_length(amino acids)=656AA_start in transcript=5_stop in transcript=1975 MSRVSPRPSPDWPLLSFLPLFLLSPCGLKMPSATSHSGSGSKSSGPPPPSGSSGSEAAAGAGAAAPASQHPATGTGAVQTEAMKQILGVI DKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDKADVLTTGAGNPVGDKLNVITVGPRGPLL VQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDG NWDLVGNNTPIFFIRDPILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVY CKFHYKTDQGIKNLSVEDAARLSQEDPDYGIRDLFNAIATGKYPSWTFYIQVMTFNQAETFPFNPFDLTKVWPHKDYPLIPVGKLVLNRN PVNYFAEVEQIAFDPSNMPPGIEASPDKMLQGRLFAYPDTHRHRLGPNYLHIPVNCPYRARVANYQRDGPMCMQDNQGGAPNYYPNSFGA PEQQPSALEHSIQYSGEVRRFNTANDDNVTQVRAFYVNVLNEEQRKRLCENIAGHLKDAQIFIQKKAVKNFTEVHPDYGSHIQALLDKYN -------------------------------------------------------------- >In-frame_ENST00000529307_ENST00000241052_TCGA-AC-A2BK_CAPRIN1_chr11_34093534_+_CAT_chr11_34470738_length(transcript)=2502nt_BP=355nt GTCTCTGAGGCCCGATTTCTCTGACGAGGGCCCAAAATGAAGAGGTCCCTGCGCGGGGGGCTCCGGGTTCAACCGACCGCCTCGTGGAGT TGGGGCGGCCTGCGTCCTGCAGCCTTGGGGTCTGTCCGCTCGGTTACCATGCACTCGAGACCTGTCGAGCGTCCCCTCTTCTTCCGTAGG AGAGAAGTGTGTTTAGAATCTTAAGGGTAAGCTTGATGATTACCAGGAACGAATGAACAAAGGGGAAAGGCTTAATCAAGATCAGCTGGA TGCCGTTTCTAAGTACCAGGAAGTCACAAATAATTTGGAGTTTGCAAAAGAATTACAGAGGAGTTTCATGGCACTAAGTCAAGATAAAGC TGATGTCCTGACCACTGGAGCTGGTAACCCAGTAGGAGACAAACTTAATGTTATTACAGTAGGGCCCCGTGGGCCCCTTCTTGTTCAGGA TGTGGTTTTCACTGATGAAATGGCTCATTTTGACCGAGAGAGAATTCCTGAGAGAGTTGTGCATGCTAAAGGAGCAGGGGCCTTTGGCTA CTTTGAGGTCACACATGACATTACCAAATACTCCAAGGCAAAGGTATTTGAGCATATTGGAAAGAAGACTCCCATCGCAGTTCGGTTCTC CACTGTTGCTGGAGAATCGGGTTCAGCTGACACAGTTCGGGACCCTCGTGGGTTTGCAGTGAAATTTTACACAGAAGATGGTAACTGGGA TCTCGTTGGAAATAACACCCCCATTTTCTTCATCAGGGATCCCATATTGTTTCCATCTTTTATCCACAGCCAAAAGAGAAATCCTCAGAC ACATCTGAAGGATCCGGACATGGTCTGGGACTTCTGGAGCCTACGTCCTGAGTCTCTGCATCAGGTTTCTTTCTTGTTCAGTGATCGGGG GATTCCAGATGGACATCGCCACATGAATGGATATGGATCACATACTTTCAAGCTGGTTAATGCAAATGGGGAGGCAGTTTATTGCAAATT CCATTATAAGACTGACCAGGGCATCAAAAACCTTTCTGTTGAAGATGCGGCGAGACTTTCCCAGGAAGATCCTGACTATGGCATCCGGGA TCTTTTTAACGCCATTGCCACAGGAAAGTACCCCTCCTGGACTTTTTACATCCAGGTCATGACATTTAATCAGGCAGAAACTTTTCCATT TAATCCATTCGATCTCACCAAGGTTTGGCCTCACAAGGACTACCCTCTCATCCCAGTTGGTAAACTGGTCTTAAACCGGAATCCAGTTAA TTACTTTGCTGAGGTTGAACAGATAGCCTTCGACCCAAGCAACATGCCACCTGGCATTGAGGCCAGTCCTGACAAAATGCTTCAGGGCCG CCTTTTTGCCTATCCTGACACTCACCGCCATCGCCTGGGACCCAATTATCTTCATATACCTGTGAACTGTCCCTACCGTGCTCGAGTGGC CAACTACCAGCGTGACGGCCCGATGTGCATGCAGGACAATCAGGGTGGTGCTCCAAATTACTACCCCAACAGCTTTGGTGCTCCGGAACA ACAGCCTTCTGCCCTGGAGCACAGCATCCAATATTCTGGAGAAGTGCGGAGATTCAACACTGCCAATGATGATAACGTTACTCAGGTGCG GGCATTCTATGTGAACGTGCTGAATGAGGAACAGAGGAAACGTCTGTGTGAGAACATTGCCGGCCACCTGAAGGATGCACAAATTTTCAT CCAGAAGAAAGCGGTCAAGAACTTCACTGAGGTCCACCCTGACTACGGGAGCCACATCCAGGCTCTTCTGGACAAGTACAATGCTGAGAA GCCTAAGAATGCGATTCACACCTTTGTGCAGTCCGGATCTCACTTGGCGGCAAGGGAGAAGGCAAATCTGTGAGGCCGGGGCCCTGCACC TGTGCAGCGAAGCTTAGCGTTCATCCGTGTAACCCGCTCATCACTGGATGAAGATTCTCCTGTGCTAGATGTGCAAATGCAAGCTAGTGG CTTCAAAATAGAGAATCCCACTTTCTATAGCAGATTGTGTAACAATTTTAATGCTATTTCCCCAGGGGAAAATGAAGGTTAGGATTTAAC AGTCATTTAAAAAAAAAATTTGTTTTGACGGATGATTGGATTATTCATTTAAAATGATTAGAAGGCAAGTTTCTAGCTAGAAATATGATT TTATTTGACAAAATTTGTTGAAATTATGTATGTTTACATATCACCTCATGGCCTATTATATTAAAATATGGCTATAAATATATAAAAAGA AAAGATAAAGATGATCTACTCAGAAATTTTTATTTTTCTAAGGTTCTCATAGGAAAAGTACATTTAATACAGCAGTGTCATCAGAAGATA ACTTGAGCACCGTCATGGCTTAATGTTTATTCCTGATAATAATTGATCAAATTCATTTTTTTCACTGGAGTTACATTAATGTTAATTCAG >In-frame_ENST00000529307_ENST00000241052_TCGA-AC-A2BK_CAPRIN1_chr11_34093534_+_CAT_chr11_34470738_length(amino acids)=546AA_start in transcript=232_stop in transcript=1872 MNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDKADVLTTGAGNPVGDKLNVITVGPRGPLLVQDVVFTDEMAHFDRERIPE RVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDPILF PSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQGIKNLSVEDAA RLSQEDPDYGIRDLFNAIATGKYPSWTFYIQVMTFNQAETFPFNPFDLTKVWPHKDYPLIPVGKLVLNRNPVNYFAEVEQIAFDPSNMPP GIEASPDKMLQGRLFAYPDTHRHRLGPNYLHIPVNCPYRARVANYQRDGPMCMQDNQGGAPNYYPNSFGAPEQQPSALEHSIQYSGEVRR FNTANDDNVTQVRAFYVNVLNEEQRKRLCENIAGHLKDAQIFIQKKAVKNFTEVHPDYGSHIQALLDKYNAEKPKNAIHTFVQSGSHLAA -------------------------------------------------------------- |
Top |
Fusion Gene PPI Analysis for CAPRIN1-CAT |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
Related Drugs for CAPRIN1-CAT |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
Related Diseases for CAPRIN1-CAT |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | CAT | C0268419 | Acatalasia | 7 | CTD_human;GENOMICS_ENGLAND;ORPHANET |
Tgene | CAT | C0007621 | Neoplastic Cell Transformation | 6 | CTD_human |
Tgene | CAT | C0752048 | Hypocatalasemia | 5 | CTD_human |
Tgene | CAT | C2931868 | Catalase deficiency | 5 | CTD_human;ORPHANET |
Tgene | CAT | C2936847 | Acatalasemia Japanese type | 5 | CTD_human |
Tgene | CAT | C2936848 | Acatalasemia Swiss type | 5 | CTD_human |
Tgene | CAT | C0020538 | Hypertensive disease | 4 | CTD_human |
Tgene | CAT | C0035126 | Reperfusion Injury | 4 | CTD_human |
Tgene | CAT | C0038220 | Status Epilepticus | 4 | CTD_human |
Tgene | CAT | C0270823 | Petit mal status | 4 | CTD_human |
Tgene | CAT | C0311335 | Grand Mal Status Epilepticus | 4 | CTD_human |
Tgene | CAT | C0393734 | Complex Partial Status Epilepticus | 4 | CTD_human |
Tgene | CAT | C0751522 | Status Epilepticus, Subclinical | 4 | CTD_human |
Tgene | CAT | C0751523 | Non-Convulsive Status Epilepticus | 4 | CTD_human |
Tgene | CAT | C0751524 | Simple Partial Status Epilepticus | 4 | CTD_human |
Tgene | CAT | C0002152 | Alloxan Diabetes | 3 | CTD_human |
Tgene | CAT | C0011853 | Diabetes Mellitus, Experimental | 3 | CTD_human |
Tgene | CAT | C0022333 | Jacksonian Seizure | 3 | CTD_human |
Tgene | CAT | C0027627 | Neoplasm Metastasis | 3 | CTD_human |
Tgene | CAT | C0036572 | Seizures | 3 | CTD_human |
Tgene | CAT | C0038433 | Streptozotocin Diabetes | 3 | CTD_human |
Tgene | CAT | C0149958 | Complex partial seizures | 3 | CTD_human |
Tgene | CAT | C0234533 | Generalized seizures | 3 | CTD_human |
Tgene | CAT | C0234535 | Clonic Seizures | 3 | CTD_human |
Tgene | CAT | C0235874 | Disease Exacerbation | 3 | CTD_human |
Tgene | CAT | C0270824 | Visual seizure | 3 | CTD_human |
Tgene | CAT | C0270844 | Tonic Seizures | 3 | CTD_human |
Tgene | CAT | C0270846 | Epileptic drop attack | 3 | CTD_human |
Tgene | CAT | C0422850 | Seizures, Somatosensory | 3 | CTD_human |
Tgene | CAT | C0422852 | Seizures, Auditory | 3 | CTD_human |
Tgene | CAT | C0422853 | Olfactory seizure | 3 | CTD_human |
Tgene | CAT | C0422854 | Gustatory seizure | 3 | CTD_human |
Tgene | CAT | C0422855 | Vertiginous seizure | 3 | CTD_human |
Tgene | CAT | C0494475 | Tonic - clonic seizures | 3 | CTD_human |
Tgene | CAT | C0751056 | Non-epileptic convulsion | 3 | CTD_human |
Tgene | CAT | C0751110 | Single Seizure | 3 | CTD_human |
Tgene | CAT | C0751123 | Atonic Absence Seizures | 3 | CTD_human |
Tgene | CAT | C0751494 | Convulsive Seizures | 3 | CTD_human |
Tgene | CAT | C0751495 | Seizures, Focal | 3 | CTD_human |
Tgene | CAT | C0751496 | Seizures, Sensory | 3 | CTD_human |
Tgene | CAT | C3495874 | Nonepileptic Seizures | 3 | CTD_human |
Tgene | CAT | C4048158 | Convulsions | 3 | CTD_human |
Tgene | CAT | C4316903 | Absence Seizures | 3 | CTD_human |
Tgene | CAT | C4317109 | Epileptic Seizures | 3 | CTD_human |
Tgene | CAT | C4317123 | Myoclonic Seizures | 3 | CTD_human |
Tgene | CAT | C4505436 | Generalized Absence Seizures | 3 | CTD_human |
Tgene | CAT | C0000771 | Abnormalities, Drug-Induced | 2 | CTD_human |
Tgene | CAT | C0001973 | Alcoholic Intoxication, Chronic | 2 | PSYGENET |
Tgene | CAT | C0011860 | Diabetes Mellitus, Non-Insulin-Dependent | 2 | CTD_human |
Tgene | CAT | C0019193 | Hepatitis, Toxic | 2 | CTD_human |
Tgene | CAT | C0022661 | Kidney Failure, Chronic | 2 | CTD_human |
Tgene | CAT | C0027540 | Necrosis | 2 | CTD_human |
Tgene | CAT | C0027626 | Neoplasm Invasiveness | 2 | CTD_human |
Tgene | CAT | C0860207 | Drug-Induced Liver Disease | 2 | CTD_human |
Tgene | CAT | C1262760 | Hepatitis, Drug-Induced | 2 | CTD_human |
Tgene | CAT | C1269683 | Major Depressive Disorder | 2 | CTD_human;PSYGENET |
Tgene | CAT | C3658290 | Drug-Induced Acute Liver Injury | 2 | CTD_human |
Tgene | CAT | C4277682 | Chemical and Drug Induced Liver Injury | 2 | CTD_human |
Tgene | CAT | C4279912 | Chemically-Induced Liver Toxicity | 2 | CTD_human |
Tgene | CAT | C0003493 | Aortic Diseases | 1 | CTD_human |
Tgene | CAT | C0003865 | Arthritis, Adjuvant-Induced | 1 | CTD_human |
Tgene | CAT | C0003873 | Rheumatoid Arthritis | 1 | CTD_human |
Tgene | CAT | C0004045 | Asphyxia Neonatorum | 1 | CTD_human |
Tgene | CAT | C0004096 | Asthma | 1 | CTD_human |
Tgene | CAT | C0004352 | Autistic Disorder | 1 | CTD_human |
Tgene | CAT | C0004943 | Behcet Syndrome | 1 | CTD_human |
Tgene | CAT | C0006142 | Malignant neoplasm of breast | 1 | CTD_human |
Tgene | CAT | C0006826 | Malignant Neoplasms | 1 | CTD_human |
Tgene | CAT | C0007131 | Non-Small Cell Lung Carcinoma | 1 | CTD_human |
Tgene | CAT | C0007786 | Brain Ischemia | 1 | CTD_human |
Tgene | CAT | C0008370 | Cholestasis | 1 | CTD_human |
Tgene | CAT | C0008909 | Claustrophobia | 1 | CTD_human |
Tgene | CAT | C0011574 | Involutional Depression | 1 | CTD_human |
Tgene | CAT | C0011849 | Diabetes Mellitus | 1 | CTD_human |
Tgene | CAT | C0011854 | Diabetes Mellitus, Insulin-Dependent | 1 | CTD_human |
Tgene | CAT | C0011882 | Diabetic Neuropathies | 1 | CTD_human |
Tgene | CAT | C0013386 | Dyskinesia, Drug-Induced | 1 | CTD_human |
Tgene | CAT | C0013604 | Edema | 1 | CTD_human |
Tgene | CAT | C0015695 | Fatty Liver | 1 | CTD_human |
Tgene | CAT | C0015923 | Fetal Alcohol Syndrome | 1 | CTD_human |
Tgene | CAT | C0017638 | Glioma | 1 | CTD_human |
Tgene | CAT | C0018801 | Heart failure | 1 | CTD_human |
Tgene | CAT | C0018802 | Congestive heart failure | 1 | CTD_human |
Tgene | CAT | C0019158 | Hepatitis | 1 | CTD_human |
Tgene | CAT | C0019189 | Hepatitis, Chronic | 1 | CTD_human |
Tgene | CAT | C0020452 | Hyperemia | 1 | CTD_human |
Tgene | CAT | C0020550 | Hyperthyroidism | 1 | CTD_human |
Tgene | CAT | C0020649 | Hypotension | 1 | CTD_human |
Tgene | CAT | C0022593 | Keratosis | 1 | CTD_human |
Tgene | CAT | C0022594 | Keratosis Blennorrhagica | 1 | CTD_human |
Tgene | CAT | C0022650 | Kidney Calculi | 1 | CTD_human |
Tgene | CAT | C0023212 | Left-Sided Heart Failure | 1 | CTD_human |
Tgene | CAT | C0023891 | Liver Cirrhosis, Alcoholic | 1 | CTD_human |
Tgene | CAT | C0024141 | Lupus Erythematosus, Systemic | 1 | CTD_human |
Tgene | CAT | C0024796 | Marfan Syndrome | 1 | CTD_human |
Tgene | CAT | C0025500 | Mesothelioma | 1 | CTD_human |
Tgene | CAT | C0027051 | Myocardial Infarction | 1 | CTD_human |
Tgene | CAT | C0027055 | Myocardial Reperfusion Injury | 1 | CTD_human |
Tgene | CAT | C0027651 | Neoplasms | 1 | CTD_human |
Tgene | CAT | C0029458 | Osteoporosis, Postmenopausal | 1 | CTD_human |
Tgene | CAT | C0030246 | Pustulosis of Palms and Soles | 1 | CTD_human |
Tgene | CAT | C0032927 | Precancerous Conditions | 1 | CTD_human |
Tgene | CAT | C0033141 | Cardiomyopathies, Primary | 1 | CTD_human |
Tgene | CAT | C0033626 | Protein Deficiency | 1 | CTD_human |
Tgene | CAT | C0033860 | Psoriasis | 1 | CTD_human |
Tgene | CAT | C0034063 | Pulmonary Edema | 1 | CTD_human |
Tgene | CAT | C0034065 | Pulmonary Embolism | 1 | CTD_human |
Tgene | CAT | C0034069 | Pulmonary Fibrosis | 1 | CTD_human |
Tgene | CAT | C0036529 | Myocardial Diseases, Secondary | 1 | CTD_human |
Tgene | CAT | C0038358 | Gastric ulcer | 1 | CTD_human |
Tgene | CAT | C0041408 | Turner Syndrome | 1 | CTD_human |
Tgene | CAT | C0041696 | Unipolar Depression | 1 | PSYGENET |
Tgene | CAT | C0042484 | Venous Engorgement | 1 | CTD_human |
Tgene | CAT | C0079744 | Diffuse Large B-Cell Lymphoma | 1 | CTD_human |
Tgene | CAT | C0086501 | Keratoma | 1 | CTD_human |
Tgene | CAT | C0086692 | Benign Neoplasm | 1 | CTD_human |
Tgene | CAT | C0149519 | Chronic Persistent Hepatitis | 1 | CTD_human |
Tgene | CAT | C0151526 | Premature Birth | 1 | CTD_human |
Tgene | CAT | C0151603 | Anasarca | 1 | CTD_human |
Tgene | CAT | C0178824 | Reactive Hyperemia | 1 | CTD_human |
Tgene | CAT | C0205734 | Diabetes, Autoimmune | 1 | CTD_human |
Tgene | CAT | C0235527 | Heart Failure, Right-Sided | 1 | CTD_human |
Tgene | CAT | C0242380 | Libman-Sacks Disease | 1 | CTD_human |
Tgene | CAT | C0242488 | Acute Lung Injury | 1 | CTD_human |
Tgene | CAT | C0242526 | Gonadal Dysgenesis, 45,X | 1 | CTD_human |
Tgene | CAT | C0259783 | mixed gliomas | 1 | CTD_human |
Tgene | CAT | C0271673 | Symmetric Diabetic Proximal Motor Neuropathy | 1 | CTD_human |
Tgene | CAT | C0271674 | Asymmetric Diabetic Proximal Motor Neuropathy | 1 | CTD_human |
Tgene | CAT | C0271678 | Diabetic Mononeuropathy | 1 | CTD_human |
Tgene | CAT | C0271680 | Diabetic Polyneuropathies | 1 | CTD_human |
Tgene | CAT | C0271685 | Diabetic Amyotrophy | 1 | CTD_human |
Tgene | CAT | C0271686 | Diabetic Autonomic Neuropathy | 1 | CTD_human |
Tgene | CAT | C0282313 | Condition, Preneoplastic | 1 | CTD_human |
Tgene | CAT | C0333233 | Active Hyperemia | 1 | CTD_human |
Tgene | CAT | C0333704 | Chromosome Breaks | 1 | CTD_human |
Tgene | CAT | C0342302 | Brittle diabetes | 1 | CTD_human |
Tgene | CAT | C0349231 | Phobic anxiety disorder | 1 | CTD_human |
Tgene | CAT | C0376628 | Chromosome Breakage | 1 | CTD_human |
Tgene | CAT | C0393835 | Diabetic Asymmetric Polyneuropathy | 1 | CTD_human |
Tgene | CAT | C0400966 | Non-alcoholic Fatty Liver Disease | 1 | CTD_human |
Tgene | CAT | C0520463 | Chronic active hepatitis | 1 | CTD_human |
Tgene | CAT | C0524611 | Cryptogenic Chronic Hepatitis | 1 | CTD_human |
Tgene | CAT | C0524702 | Pulmonary Thromboembolisms | 1 | CTD_human |
Tgene | CAT | C0555198 | Malignant Glioma | 1 | CTD_human |
Tgene | CAT | C0678222 | Breast Carcinoma | 1 | CTD_human |
Tgene | CAT | C0751074 | Diabetic Neuralgia | 1 | CTD_human |
Tgene | CAT | C0751088 | Dyskinesia, Medication-Induced | 1 | CTD_human |
Tgene | CAT | C0814154 | Alcohol Related Neurodevelopmental Disorder | 1 | CTD_human |
Tgene | CAT | C0878544 | Cardiomyopathies | 1 | CTD_human |
Tgene | CAT | C0917798 | Cerebral Ischemia | 1 | CTD_human |
Tgene | CAT | C0971858 | Arthritis, Collagen-Induced | 1 | CTD_human |
Tgene | CAT | C0993582 | Arthritis, Experimental | 1 | CTD_human |
Tgene | CAT | C1257931 | Mammary Neoplasms, Human | 1 | CTD_human |
Tgene | CAT | C1456865 | Ureteral Calculi | 1 | CTD_human |
Tgene | CAT | C1458155 | Mammary Neoplasms | 1 | CTD_human |
Tgene | CAT | C1527168 | Bonnevie-Ullrich Syndrome | 1 | CTD_human |
Tgene | CAT | C1571983 | Involutional paraphrenia | 1 | CTD_human |
Tgene | CAT | C1571984 | Psychosis, Involutional | 1 | CTD_human |
Tgene | CAT | C1959583 | Myocardial Failure | 1 | CTD_human |
Tgene | CAT | C1961112 | Heart Decompensation | 1 | CTD_human |
Tgene | CAT | C2711227 | Steatohepatitis | 1 | CTD_human |
Tgene | CAT | C2985290 | Fetal Alcohol Spectrum Disorders | 1 | CTD_human |
Tgene | CAT | C3146244 | Alcohol Related Birth Defect | 1 | CTD_human |
Tgene | CAT | C3241937 | Nonalcoholic Steatohepatitis | 1 | CTD_human |
Tgene | CAT | C3661483 | Partial Fetal Alcohol Syndrome | 1 | CTD_human |
Tgene | CAT | C3714618 | Primary Hyperthyroidism | 1 | CTD_human |
Tgene | CAT | C3837958 | Diabetes Mellitus, Ketosis-Prone | 1 | CTD_human |
Tgene | CAT | C4554117 | Diabetes Mellitus, Sudden-Onset | 1 | CTD_human |
Tgene | CAT | C4704874 | Mammary Carcinoma, Human | 1 | CTD_human |
Tgene | CAT | C4721507 | Alveolitis, Fibrosing | 1 | CTD_human |
Tgene | CAT | C4721845 | Marfan Syndrome, Type I | 1 | CTD_human |