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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:CCM2-PPIA (FusionGDB2 ID:14104) |
Fusion Gene Summary for CCM2-PPIA |
Fusion gene summary |
Fusion gene information | Fusion gene name: CCM2-PPIA | Fusion gene ID: 14104 | Hgene | Tgene | Gene symbol | CCM2 | PPIA | Gene ID | 83605 | 5478 |
Gene name | CCM2 scaffold protein | peptidylprolyl isomerase A | |
Synonyms | C7orf22|OSM|PP10187 | CYPA|CYPH|HEL-S-69p | |
Cytomap | 7p13 | 7p13 | |
Type of gene | protein-coding | protein-coding | |
Description | cerebral cavernous malformations 2 proteinCCM2 scaffolding proteincerebral cavernous malformation 2malcaverninosmosensing scaffold for MEKK3 | peptidyl-prolyl cis-trans isomerase APPIase AT cell cyclophilincyclosporin A-binding proteinepididymis secretory sperm binding protein Li 69ppeptidylprolyl isomerase A (cyclophilin A)rotamase A | |
Modification date | 20200313 | 20200329 | |
UniProtAcc | Q9BSQ5 | . | |
Ensembl transtripts involved in fusion gene | ENST00000461377, ENST00000258781, ENST00000544363, ENST00000541586, ENST00000475551, ENST00000381112, ENST00000474617, | ENST00000451562, ENST00000468812, ENST00000489459, ENST00000355968, ENST00000480603, | |
Fusion gene scores | * DoF score | 9 X 5 X 6=270 | 7 X 6 X 2=84 |
# samples | 12 | 8 | |
** MAII score | log2(12/270*10)=-1.16992500144231 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(8/84*10)=-0.070389327891398 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: CCM2 [Title/Abstract] AND PPIA [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | CCM2(45078025)-PPIA(44838846), # samples:3 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | PPIA | GO:0000413 | protein peptidyl-prolyl isomerization | 14993672|20676357 |
Fusion gene breakpoints across CCM2 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across PPIA (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | BRCA | TCGA-A7-A26G-01A | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
ChimerDB4 | BRCA | TCGA-AR-A24O-01A | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
ChimerDB4 | BRCA | TCGA-A7-A26G | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
ChimerDB4 | BRCA | TCGA-A7-A26G-01A | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
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Fusion Gene ORF analysis for CCM2-PPIA |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
3UTR-3CDS | ENST00000461377 | ENST00000451562 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
3UTR-3CDS | ENST00000461377 | ENST00000468812 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
3UTR-5UTR | ENST00000461377 | ENST00000489459 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
3UTR-5UTR | ENST00000461377 | ENST00000355968 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
3UTR-3UTR | ENST00000461377 | ENST00000480603 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
In-frame | ENST00000258781 | ENST00000451562 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
In-frame | ENST00000258781 | ENST00000468812 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
5CDS-5UTR | ENST00000258781 | ENST00000489459 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
5CDS-5UTR | ENST00000258781 | ENST00000355968 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
5CDS-3UTR | ENST00000258781 | ENST00000480603 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
In-frame | ENST00000544363 | ENST00000451562 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
In-frame | ENST00000544363 | ENST00000468812 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
5CDS-5UTR | ENST00000544363 | ENST00000489459 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
5CDS-5UTR | ENST00000544363 | ENST00000355968 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
5CDS-3UTR | ENST00000544363 | ENST00000480603 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
intron-3CDS | ENST00000541586 | ENST00000451562 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
intron-3CDS | ENST00000541586 | ENST00000468812 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
intron-5UTR | ENST00000541586 | ENST00000489459 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
intron-5UTR | ENST00000541586 | ENST00000355968 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
intron-3UTR | ENST00000541586 | ENST00000480603 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
In-frame | ENST00000475551 | ENST00000451562 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
In-frame | ENST00000475551 | ENST00000468812 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
5CDS-5UTR | ENST00000475551 | ENST00000489459 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
5CDS-5UTR | ENST00000475551 | ENST00000355968 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
5CDS-3UTR | ENST00000475551 | ENST00000480603 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
In-frame | ENST00000381112 | ENST00000451562 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
In-frame | ENST00000381112 | ENST00000468812 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
5CDS-5UTR | ENST00000381112 | ENST00000489459 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
5CDS-5UTR | ENST00000381112 | ENST00000355968 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
5CDS-3UTR | ENST00000381112 | ENST00000480603 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
In-frame | ENST00000474617 | ENST00000451562 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
In-frame | ENST00000474617 | ENST00000468812 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
5CDS-5UTR | ENST00000474617 | ENST00000489459 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
5CDS-5UTR | ENST00000474617 | ENST00000355968 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
5CDS-3UTR | ENST00000474617 | ENST00000480603 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + |
3UTR-3CDS | ENST00000461377 | ENST00000451562 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
3UTR-3CDS | ENST00000461377 | ENST00000468812 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
3UTR-5UTR | ENST00000461377 | ENST00000489459 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
3UTR-5UTR | ENST00000461377 | ENST00000355968 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
3UTR-3UTR | ENST00000461377 | ENST00000480603 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
In-frame | ENST00000258781 | ENST00000451562 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
In-frame | ENST00000258781 | ENST00000468812 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
5CDS-5UTR | ENST00000258781 | ENST00000489459 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
5CDS-5UTR | ENST00000258781 | ENST00000355968 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
5CDS-3UTR | ENST00000258781 | ENST00000480603 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
In-frame | ENST00000544363 | ENST00000451562 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
In-frame | ENST00000544363 | ENST00000468812 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
5CDS-5UTR | ENST00000544363 | ENST00000489459 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
5CDS-5UTR | ENST00000544363 | ENST00000355968 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
5CDS-3UTR | ENST00000544363 | ENST00000480603 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
intron-3CDS | ENST00000541586 | ENST00000451562 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
intron-3CDS | ENST00000541586 | ENST00000468812 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
intron-5UTR | ENST00000541586 | ENST00000489459 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
intron-5UTR | ENST00000541586 | ENST00000355968 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
intron-3UTR | ENST00000541586 | ENST00000480603 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
In-frame | ENST00000475551 | ENST00000451562 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
In-frame | ENST00000475551 | ENST00000468812 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
5CDS-5UTR | ENST00000475551 | ENST00000489459 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
5CDS-5UTR | ENST00000475551 | ENST00000355968 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
5CDS-3UTR | ENST00000475551 | ENST00000480603 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
In-frame | ENST00000381112 | ENST00000451562 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
In-frame | ENST00000381112 | ENST00000468812 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
5CDS-5UTR | ENST00000381112 | ENST00000489459 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
5CDS-5UTR | ENST00000381112 | ENST00000355968 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
5CDS-3UTR | ENST00000381112 | ENST00000480603 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
In-frame | ENST00000474617 | ENST00000451562 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
In-frame | ENST00000474617 | ENST00000468812 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
5CDS-5UTR | ENST00000474617 | ENST00000489459 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
5CDS-5UTR | ENST00000474617 | ENST00000355968 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
5CDS-3UTR | ENST00000474617 | ENST00000480603 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000258781 | CCM2 | chr7 | 45078025 | + | ENST00000451562 | PPIA | chr7 | 44838846 | + | 783 | 353 | 89 | 649 | 186 |
ENST00000258781 | CCM2 | chr7 | 45078025 | + | ENST00000468812 | PPIA | chr7 | 44838846 | + | 2477 | 353 | 89 | 781 | 230 |
ENST00000544363 | CCM2 | chr7 | 45078025 | + | ENST00000451562 | PPIA | chr7 | 44838846 | + | 780 | 350 | 86 | 646 | 186 |
ENST00000544363 | CCM2 | chr7 | 45078025 | + | ENST00000468812 | PPIA | chr7 | 44838846 | + | 2474 | 350 | 86 | 778 | 230 |
ENST00000475551 | CCM2 | chr7 | 45078025 | + | ENST00000451562 | PPIA | chr7 | 44838846 | + | 1376 | 946 | 679 | 1242 | 187 |
ENST00000475551 | CCM2 | chr7 | 45078025 | + | ENST00000468812 | PPIA | chr7 | 44838846 | + | 3070 | 946 | 679 | 1374 | 231 |
ENST00000381112 | CCM2 | chr7 | 45078025 | + | ENST00000451562 | PPIA | chr7 | 44838846 | + | 1376 | 946 | 679 | 1242 | 187 |
ENST00000381112 | CCM2 | chr7 | 45078025 | + | ENST00000468812 | PPIA | chr7 | 44838846 | + | 3070 | 946 | 679 | 1374 | 231 |
ENST00000474617 | CCM2 | chr7 | 45078025 | + | ENST00000451562 | PPIA | chr7 | 44838846 | + | 730 | 300 | 33 | 596 | 187 |
ENST00000474617 | CCM2 | chr7 | 45078025 | + | ENST00000468812 | PPIA | chr7 | 44838846 | + | 2424 | 300 | 33 | 728 | 231 |
ENST00000258781 | CCM2 | chr7 | 45078025 | + | ENST00000451562 | PPIA | chr7 | 44838845 | + | 783 | 353 | 89 | 649 | 186 |
ENST00000258781 | CCM2 | chr7 | 45078025 | + | ENST00000468812 | PPIA | chr7 | 44838845 | + | 2477 | 353 | 89 | 781 | 230 |
ENST00000544363 | CCM2 | chr7 | 45078025 | + | ENST00000451562 | PPIA | chr7 | 44838845 | + | 780 | 350 | 86 | 646 | 186 |
ENST00000544363 | CCM2 | chr7 | 45078025 | + | ENST00000468812 | PPIA | chr7 | 44838845 | + | 2474 | 350 | 86 | 778 | 230 |
ENST00000475551 | CCM2 | chr7 | 45078025 | + | ENST00000451562 | PPIA | chr7 | 44838845 | + | 1376 | 946 | 679 | 1242 | 187 |
ENST00000475551 | CCM2 | chr7 | 45078025 | + | ENST00000468812 | PPIA | chr7 | 44838845 | + | 3070 | 946 | 679 | 1374 | 231 |
ENST00000381112 | CCM2 | chr7 | 45078025 | + | ENST00000451562 | PPIA | chr7 | 44838845 | + | 1376 | 946 | 679 | 1242 | 187 |
ENST00000381112 | CCM2 | chr7 | 45078025 | + | ENST00000468812 | PPIA | chr7 | 44838845 | + | 3070 | 946 | 679 | 1374 | 231 |
ENST00000474617 | CCM2 | chr7 | 45078025 | + | ENST00000451562 | PPIA | chr7 | 44838845 | + | 730 | 300 | 33 | 596 | 187 |
ENST00000474617 | CCM2 | chr7 | 45078025 | + | ENST00000468812 | PPIA | chr7 | 44838845 | + | 2424 | 300 | 33 | 728 | 231 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000258781 | ENST00000451562 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + | 0.004399018 | 0.99560094 |
ENST00000258781 | ENST00000468812 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + | 0.001518061 | 0.9984819 |
ENST00000544363 | ENST00000451562 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + | 0.004320276 | 0.99567974 |
ENST00000544363 | ENST00000468812 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + | 0.001444366 | 0.9985556 |
ENST00000475551 | ENST00000451562 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + | 0.002538758 | 0.9974612 |
ENST00000475551 | ENST00000468812 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + | 0.000648813 | 0.9993512 |
ENST00000381112 | ENST00000451562 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + | 0.002538758 | 0.9974612 |
ENST00000381112 | ENST00000468812 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + | 0.000648813 | 0.9993512 |
ENST00000474617 | ENST00000451562 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + | 0.002395329 | 0.9976046 |
ENST00000474617 | ENST00000468812 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838846 | + | 0.000753615 | 0.99924636 |
ENST00000258781 | ENST00000451562 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + | 0.004399018 | 0.99560094 |
ENST00000258781 | ENST00000468812 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + | 0.001518061 | 0.9984819 |
ENST00000544363 | ENST00000451562 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + | 0.004320276 | 0.99567974 |
ENST00000544363 | ENST00000468812 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + | 0.001444366 | 0.9985556 |
ENST00000475551 | ENST00000451562 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + | 0.002538758 | 0.9974612 |
ENST00000475551 | ENST00000468812 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + | 0.000648813 | 0.9993512 |
ENST00000381112 | ENST00000451562 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + | 0.002538758 | 0.9974612 |
ENST00000381112 | ENST00000468812 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + | 0.000648813 | 0.9993512 |
ENST00000474617 | ENST00000451562 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + | 0.002395329 | 0.9976046 |
ENST00000474617 | ENST00000468812 | CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + | 0.000753615 | 0.99924636 |
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Fusion Genomic Features for CCM2-PPIA |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + | 0.0049266 | 0.9950734 |
CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + | 0.0049266 | 0.9950734 |
CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + | 0.0049266 | 0.9950734 |
CCM2 | chr7 | 45078025 | + | PPIA | chr7 | 44838845 | + | 0.0049266 | 0.9950734 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for CCM2-PPIA |
Go to FGviewer for the breakpoints of chr7:45078025-chr7:44838846 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
CCM2 | . |
FUNCTION: Component of the CCM signaling pathway which is a crucial regulator of heart and vessel formation and integrity. May act through the stabilization of endothelial cell junctions (By similarity). May function as a scaffold protein for MAP2K3-MAP3K3 signaling. Seems to play a major role in the modulation of MAP3K3-dependent p38 activation induced by hyperosmotic shock (By similarity). {ECO:0000250}. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | CCM2 | chr7:45078025 | chr7:44838845 | ENST00000258781 | + | 2 | 10 | 59_248 | 68.0 | 445.0 | Domain | PID |
Hgene | CCM2 | chr7:45078025 | chr7:44838845 | ENST00000381112 | + | 2 | 10 | 59_248 | 89.0 | 466.0 | Domain | PID |
Hgene | CCM2 | chr7:45078025 | chr7:44838845 | ENST00000541586 | + | 1 | 9 | 59_248 | 0 | 387.0 | Domain | PID |
Hgene | CCM2 | chr7:45078025 | chr7:44838845 | ENST00000544363 | + | 2 | 8 | 59_248 | 68.0 | 354.0 | Domain | PID |
Hgene | CCM2 | chr7:45078025 | chr7:44838846 | ENST00000258781 | + | 2 | 10 | 59_248 | 68.0 | 445.0 | Domain | PID |
Hgene | CCM2 | chr7:45078025 | chr7:44838846 | ENST00000381112 | + | 2 | 10 | 59_248 | 89.0 | 466.0 | Domain | PID |
Hgene | CCM2 | chr7:45078025 | chr7:44838846 | ENST00000541586 | + | 1 | 9 | 59_248 | 0 | 387.0 | Domain | PID |
Hgene | CCM2 | chr7:45078025 | chr7:44838846 | ENST00000544363 | + | 2 | 8 | 59_248 | 68.0 | 354.0 | Domain | PID |
Hgene | CCM2 | chr7:45078025 | chr7:44838845 | ENST00000258781 | + | 2 | 10 | 283_376 | 68.0 | 445.0 | Region | Note=Harmonin homology domain |
Hgene | CCM2 | chr7:45078025 | chr7:44838845 | ENST00000381112 | + | 2 | 10 | 283_376 | 89.0 | 466.0 | Region | Note=Harmonin homology domain |
Hgene | CCM2 | chr7:45078025 | chr7:44838845 | ENST00000541586 | + | 1 | 9 | 283_376 | 0 | 387.0 | Region | Note=Harmonin homology domain |
Hgene | CCM2 | chr7:45078025 | chr7:44838845 | ENST00000544363 | + | 2 | 8 | 283_376 | 68.0 | 354.0 | Region | Note=Harmonin homology domain |
Hgene | CCM2 | chr7:45078025 | chr7:44838846 | ENST00000258781 | + | 2 | 10 | 283_376 | 68.0 | 445.0 | Region | Note=Harmonin homology domain |
Hgene | CCM2 | chr7:45078025 | chr7:44838846 | ENST00000381112 | + | 2 | 10 | 283_376 | 89.0 | 466.0 | Region | Note=Harmonin homology domain |
Hgene | CCM2 | chr7:45078025 | chr7:44838846 | ENST00000541586 | + | 1 | 9 | 283_376 | 0 | 387.0 | Region | Note=Harmonin homology domain |
Hgene | CCM2 | chr7:45078025 | chr7:44838846 | ENST00000544363 | + | 2 | 8 | 283_376 | 68.0 | 354.0 | Region | Note=Harmonin homology domain |
Tgene | PPIA | chr7:45078025 | chr7:44838845 | ENST00000468812 | 0 | 5 | 7_163 | 23.0 | 166.0 | Domain | PPIase cyclophilin-type | |
Tgene | PPIA | chr7:45078025 | chr7:44838846 | ENST00000468812 | 0 | 5 | 7_163 | 23.0 | 166.0 | Domain | PPIase cyclophilin-type |
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Fusion Gene Sequence for CCM2-PPIA |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000258781_ENST00000451562_TCGA-A7-A26G-01A_CCM2_chr7_45078025_+_PPIA_chr7_44838846_length(transcript)=783nt_BP=353nt GGGGCGCGGCCGGGGCGGAGACTTCGGGCCCGGCTGGCGGGCGGCGCCGGGAGCGCGGGGGCGGCGGGCCCGGGTCGAGCATGTAGCGGC TGCTGGCGGCGGGGCTCCCGGGGCGGGCCGGGCGGGCCGCGGGAGCCGCACGCGGCGATATGGAAGAGGAGGGCAAGAAGGGCAAGAAGC CTGGAATTGTCTCGCCATTTAAACGAGTATTCCTAAAAGGTGAAAAGAGTAGAGATAAGAAAGCCCATGAGAAGGTGACAGAGAGGCGCC CTCTGCACACTGTGGTGTTGTCATTGCCTGAGCGCGTCGAGCCAGACAGACTGCTGAGCGACTATATTGAGAAGGAGGTAAAGCTGTTTG CAGACAAGGTCCCAAAGACAGCAGAAAATTTTCGTGCTCTGAGCACTGGAGAGAAAGGATTTGGTTATAAGGGTTCCTGCTTTCACAGAA TTATTCCAGGGTTTATGTGTCAGGGTGGTGACTTCACACGCCATAATGGCACTGGTGGCAAGTCCATCTATGGGGAGAAATTTGAAGATG AGAACTTCATCCTAAAGCATACGGGTCCTGGCATCTTGTCCATGGCAAATGCTGGACCCAACACAAATGGTTCCCAGTTTTTCATCTGCA CTGCCAAGACTGAGTGGTAAGGGTACAACATGGCACACTAACCACCTGACTAAATGAAAAGTTGCCCTGGGGGGAACGGAACAAACACTA >In-frame_ENST00000258781_ENST00000451562_TCGA-A7-A26G-01A_CCM2_chr7_45078025_+_PPIA_chr7_44838846_length(amino acids)=186AA_start in transcript=89_stop in transcript=649 MLAAGLPGRAGRAAGAARGDMEEEGKKGKKPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKLF ADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFIC -------------------------------------------------------------- >In-frame_ENST00000258781_ENST00000468812_TCGA-A7-A26G-01A_CCM2_chr7_45078025_+_PPIA_chr7_44838846_length(transcript)=2477nt_BP=353nt GGGGCGCGGCCGGGGCGGAGACTTCGGGCCCGGCTGGCGGGCGGCGCCGGGAGCGCGGGGGCGGCGGGCCCGGGTCGAGCATGTAGCGGC TGCTGGCGGCGGGGCTCCCGGGGCGGGCCGGGCGGGCCGCGGGAGCCGCACGCGGCGATATGGAAGAGGAGGGCAAGAAGGGCAAGAAGC CTGGAATTGTCTCGCCATTTAAACGAGTATTCCTAAAAGGTGAAAAGAGTAGAGATAAGAAAGCCCATGAGAAGGTGACAGAGAGGCGCC CTCTGCACACTGTGGTGTTGTCATTGCCTGAGCGCGTCGAGCCAGACAGACTGCTGAGCGACTATATTGAGAAGGAGGTAAAGCTGTTTG CAGACAAGGTCCCAAAGACAGCAGAAAATTTTCGTGCTCTGAGCACTGGAGAGAAAGGATTTGGTTATAAGGGTTCCTGCTTTCACAGAA TTATTCCAGGGTTTATGTGTCAGGGTGGTGACTTCACACGCCATAATGGCACTGGTGGCAAGTCCATCTATGGGGAGAAATTTGAAGATG AGAACTTCATCCTAAAGCATACGGGTCCTGGCATCTTGTCCATGGCAAATGCTGGACCCAACACAAATGGTTCCCAGTTTTTCATCTGCA CTGCCAAGACTGAGTGGTTGGATGGCAAGCATGTGGTGTTTGGCAAAGTGAAAGAAGGCATGAATATTGTGGAGGCCATGGAGCGCTTTG GGTCCAGGAATGGCAAGACCAGCAAGAAGATCACCATTGCTGACTGTGGACAACTCGAATAAGTTTGACTTGTGTTTTATCTTAACCACC AGATCATTCCTTCTGTAGCTCAGGAGAGCACCCCTCCACCCCATTTGCTCGCAGTATCCTAGAATCTTTGTGCTCTCGCTGCAGTTCCCT TTGGGTTCCATGTTTTCCTTGTTCCCTCCCATGCCTAGCTGGATTGCAGAGTTAAGTTTATGATTATGAAATAAAAACTAAATAACAATT GTCCTCGTTTGAGTTAAGAGTGTTGATGTAGGCTTTATTTTAAGCAGTAATGGGTTACTTCTGAAACATCACTTGTTTGCTTAATTCTAC ACAGTACTTAGATTTTTTTTACTTTCCAGTCCCAGGAAGTGTCAATGTTTGTTGAGTGGAATATTGAAAATGTAGGCAGCAACTGGGCAT GGTGGCTCACTGTCTGTAATGTATTACCTGAGGCAGAAGACCACCTGAGGGTAGGAGTCAAGATCAGCCTGGGCAACATAGTGAGACGCT GTCTCTACAAAAAATAATTAGCCTGGCCTGGTGGTGCATGCCTAGTCCTAGCTGATCTGGAGGCTGACGTGGGAGGATTGCTTGAGCCTA GAGTGAGCTATTATCATGCCACTGTACAGCCTGGGTGTTCACAGATCTTGTGTCTCAAAGGTAGGCAGAGGCAGGAAAAGCAAGGAGCCA GAATTAAGAGGTTGGGTCAGTCTGCAGTGAGTTCATGCATTTAGAGGTGTTCTTCAAGATGACTAATGTCAAAAATTGAGACATCTGTTG CGGTTTTTTTTTTTTTTTTTTCCCCTGGAATGCAGTGGCGTGATCTCAGCTCACTGCAGCCTCCGCCTCCTGGGTTCAAGTGATTCTAGT GCCTCAGCCTCCTGAGTAGCTGGGATAATGGGCGTGTGCCACCATGCCCAGCTAATTTTTGTATTTTTAGTATAGATGGGGTTTCATCAT TTTGACCAGGCTGGTCTCAAACTCTTGACCTCAGCTGATGCGCCTGCCTTGGCCTCCCAAACTGCTGAGATTACAGATGTGAGCCACCGC ACCCTACCTCATTTTCTGTAACAAAGCTAAGCTTGAACACTGTTGATGTTCTTGAGGGAAGCATATTGGGCTTTAGGCTGTAGGTCAAGT TTATACATCTTAATTATGGTGGAATTCCTATGTAGAGTCTAAAAAGCCAGGTACTTGGTGCTACAGTCAGTCTCCCTGCAGAGGGTTAAG GCGCAGACTACCTGCAGTGAGGAGGTACTGCTTGTAGCATATAGAGCCTCTCCCTAGCTTTGGTTATGGAGGCTTTGAGGTTTTGCAAAC CTGACCAATTTAAGCCATAAGATCTGGTCAAAGGGATACCCTTCCCACTAAGGACTTGGTTTCTCAGGAAATTATATGTACAGTGCTTGC TGGCAGTTAGATGTCAGGACAATCTAAGCTGAGAAAACCCCTTCTCTGCCCACCTTAACAGACCTCTAGGGTTCTTAACCCAGCAATCAA GTTTGCCTATCCTAGAGGTGGCGGATTTGATCATTTGGTGTGTTGGGCAATTTTTGTTTTACTGTCTGGTTCCTTCTGCGTGAATTACCA CCACCACCACTTGTGCATCTCAGTCTTGTGTGTTGTCTGGTTACGTATTCCCTGGGTGATACCATTCAATGTCTTAATGTACTTGTGGCT >In-frame_ENST00000258781_ENST00000468812_TCGA-A7-A26G-01A_CCM2_chr7_45078025_+_PPIA_chr7_44838846_length(amino acids)=230AA_start in transcript=89_stop in transcript=781 MLAAGLPGRAGRAAGAARGDMEEEGKKGKKPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKLF ADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFIC -------------------------------------------------------------- >In-frame_ENST00000544363_ENST00000451562_TCGA-A7-A26G-01A_CCM2_chr7_45078025_+_PPIA_chr7_44838846_length(transcript)=780nt_BP=350nt GCGCGGCCGGGGCGGAGACTTCGGGCCCGGCTGGCGGGCGGCGCCGGGAGCGCGGGGGCGGCGGGCCCGGGTCGAGCATGTAGCGGCTGC TGGCGGCGGGGCTCCCGGGGCGGGCCGGGCGGGCCGCGGGAGCCGCACGCGGCGATATGGAAGAGGAGGGCAAGAAGGGCAAGAAGCCTG GAATTGTCTCGCCATTTAAACGAGTATTCCTAAAAGGTGAAAAGAGTAGAGATAAGAAAGCCCATGAGAAGGTGACAGAGAGGCGCCCTC TGCACACTGTGGTGTTGTCATTGCCTGAGCGCGTCGAGCCAGACAGACTGCTGAGCGACTATATTGAGAAGGAGGTAAAGCTGTTTGCAG ACAAGGTCCCAAAGACAGCAGAAAATTTTCGTGCTCTGAGCACTGGAGAGAAAGGATTTGGTTATAAGGGTTCCTGCTTTCACAGAATTA TTCCAGGGTTTATGTGTCAGGGTGGTGACTTCACACGCCATAATGGCACTGGTGGCAAGTCCATCTATGGGGAGAAATTTGAAGATGAGA ACTTCATCCTAAAGCATACGGGTCCTGGCATCTTGTCCATGGCAAATGCTGGACCCAACACAAATGGTTCCCAGTTTTTCATCTGCACTG CCAAGACTGAGTGGTAAGGGTACAACATGGCACACTAACCACCTGACTAAATGAAAAGTTGCCCTGGGGGGAACGGAACAAACACTACTT >In-frame_ENST00000544363_ENST00000451562_TCGA-A7-A26G-01A_CCM2_chr7_45078025_+_PPIA_chr7_44838846_length(amino acids)=186AA_start in transcript=86_stop in transcript=646 MLAAGLPGRAGRAAGAARGDMEEEGKKGKKPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKLF ADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFIC -------------------------------------------------------------- >In-frame_ENST00000544363_ENST00000468812_TCGA-A7-A26G-01A_CCM2_chr7_45078025_+_PPIA_chr7_44838846_length(transcript)=2474nt_BP=350nt GCGCGGCCGGGGCGGAGACTTCGGGCCCGGCTGGCGGGCGGCGCCGGGAGCGCGGGGGCGGCGGGCCCGGGTCGAGCATGTAGCGGCTGC TGGCGGCGGGGCTCCCGGGGCGGGCCGGGCGGGCCGCGGGAGCCGCACGCGGCGATATGGAAGAGGAGGGCAAGAAGGGCAAGAAGCCTG GAATTGTCTCGCCATTTAAACGAGTATTCCTAAAAGGTGAAAAGAGTAGAGATAAGAAAGCCCATGAGAAGGTGACAGAGAGGCGCCCTC TGCACACTGTGGTGTTGTCATTGCCTGAGCGCGTCGAGCCAGACAGACTGCTGAGCGACTATATTGAGAAGGAGGTAAAGCTGTTTGCAG ACAAGGTCCCAAAGACAGCAGAAAATTTTCGTGCTCTGAGCACTGGAGAGAAAGGATTTGGTTATAAGGGTTCCTGCTTTCACAGAATTA TTCCAGGGTTTATGTGTCAGGGTGGTGACTTCACACGCCATAATGGCACTGGTGGCAAGTCCATCTATGGGGAGAAATTTGAAGATGAGA ACTTCATCCTAAAGCATACGGGTCCTGGCATCTTGTCCATGGCAAATGCTGGACCCAACACAAATGGTTCCCAGTTTTTCATCTGCACTG CCAAGACTGAGTGGTTGGATGGCAAGCATGTGGTGTTTGGCAAAGTGAAAGAAGGCATGAATATTGTGGAGGCCATGGAGCGCTTTGGGT CCAGGAATGGCAAGACCAGCAAGAAGATCACCATTGCTGACTGTGGACAACTCGAATAAGTTTGACTTGTGTTTTATCTTAACCACCAGA TCATTCCTTCTGTAGCTCAGGAGAGCACCCCTCCACCCCATTTGCTCGCAGTATCCTAGAATCTTTGTGCTCTCGCTGCAGTTCCCTTTG GGTTCCATGTTTTCCTTGTTCCCTCCCATGCCTAGCTGGATTGCAGAGTTAAGTTTATGATTATGAAATAAAAACTAAATAACAATTGTC CTCGTTTGAGTTAAGAGTGTTGATGTAGGCTTTATTTTAAGCAGTAATGGGTTACTTCTGAAACATCACTTGTTTGCTTAATTCTACACA GTACTTAGATTTTTTTTACTTTCCAGTCCCAGGAAGTGTCAATGTTTGTTGAGTGGAATATTGAAAATGTAGGCAGCAACTGGGCATGGT GGCTCACTGTCTGTAATGTATTACCTGAGGCAGAAGACCACCTGAGGGTAGGAGTCAAGATCAGCCTGGGCAACATAGTGAGACGCTGTC TCTACAAAAAATAATTAGCCTGGCCTGGTGGTGCATGCCTAGTCCTAGCTGATCTGGAGGCTGACGTGGGAGGATTGCTTGAGCCTAGAG TGAGCTATTATCATGCCACTGTACAGCCTGGGTGTTCACAGATCTTGTGTCTCAAAGGTAGGCAGAGGCAGGAAAAGCAAGGAGCCAGAA TTAAGAGGTTGGGTCAGTCTGCAGTGAGTTCATGCATTTAGAGGTGTTCTTCAAGATGACTAATGTCAAAAATTGAGACATCTGTTGCGG TTTTTTTTTTTTTTTTTTCCCCTGGAATGCAGTGGCGTGATCTCAGCTCACTGCAGCCTCCGCCTCCTGGGTTCAAGTGATTCTAGTGCC TCAGCCTCCTGAGTAGCTGGGATAATGGGCGTGTGCCACCATGCCCAGCTAATTTTTGTATTTTTAGTATAGATGGGGTTTCATCATTTT GACCAGGCTGGTCTCAAACTCTTGACCTCAGCTGATGCGCCTGCCTTGGCCTCCCAAACTGCTGAGATTACAGATGTGAGCCACCGCACC CTACCTCATTTTCTGTAACAAAGCTAAGCTTGAACACTGTTGATGTTCTTGAGGGAAGCATATTGGGCTTTAGGCTGTAGGTCAAGTTTA TACATCTTAATTATGGTGGAATTCCTATGTAGAGTCTAAAAAGCCAGGTACTTGGTGCTACAGTCAGTCTCCCTGCAGAGGGTTAAGGCG CAGACTACCTGCAGTGAGGAGGTACTGCTTGTAGCATATAGAGCCTCTCCCTAGCTTTGGTTATGGAGGCTTTGAGGTTTTGCAAACCTG ACCAATTTAAGCCATAAGATCTGGTCAAAGGGATACCCTTCCCACTAAGGACTTGGTTTCTCAGGAAATTATATGTACAGTGCTTGCTGG CAGTTAGATGTCAGGACAATCTAAGCTGAGAAAACCCCTTCTCTGCCCACCTTAACAGACCTCTAGGGTTCTTAACCCAGCAATCAAGTT TGCCTATCCTAGAGGTGGCGGATTTGATCATTTGGTGTGTTGGGCAATTTTTGTTTTACTGTCTGGTTCCTTCTGCGTGAATTACCACCA CCACCACTTGTGCATCTCAGTCTTGTGTGTTGTCTGGTTACGTATTCCCTGGGTGATACCATTCAATGTCTTAATGTACTTGTGGCTCAG >In-frame_ENST00000544363_ENST00000468812_TCGA-A7-A26G-01A_CCM2_chr7_45078025_+_PPIA_chr7_44838846_length(amino acids)=230AA_start in transcript=86_stop in transcript=778 MLAAGLPGRAGRAAGAARGDMEEEGKKGKKPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKLF ADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFIC -------------------------------------------------------------- >In-frame_ENST00000475551_ENST00000451562_TCGA-A7-A26G-01A_CCM2_chr7_45078025_+_PPIA_chr7_44838846_length(transcript)=1376nt_BP=946nt GAAGAAGTGAGCTTGGCCAGAGGCACGCTGTTTAATTTCAAAGTGCTGCTGACTCAAACTCATGAGTCCTGGAGGCAGGTAGAGGCACTT GTAGGCTGAGGACCCGTAGAGCCCGGTGTGCCCTGCCCAAGCCCCACCTGGGAATGGAGTTATCTCTGTAAAGATCTTGCTGCCTTTGAG CAAGCACTGCAAATGGGGTAACTGGAACAGCCTTGTCGCGTGTTTCCACCCTTCGTATGAGGCAGGTACCATGGGTCTTCACCAACAGCA CGGCCTGTTGTCTCCAGGAAATGGTAGCCCCTCACAGTGCTTTCTGTCTGCTTGTTTAGCTTTGGCATTTGAATGTGCAGAATGGTGGAC TTTGAAATTAATGTCCTTCTGTTGACTGCAGAATTTCTGCTGGAAATGCAGGGAGGCTGCTTGTGGGGTTCGCGTGCTGTGGGAAGTAGG GAAAATGAGCTGGTTTACTTTGTGTCTTTTTGTGCATGCAGACTGTTTGGATTTTGCCAACAGTTTCTGGGTGCTGCCTGCTTTTTAAAC TTTTAAAAAATTGTAAACAGCTTCAGTGGCTTTGCAGAAGGAAGCTGTGGTTTCTGGTCTTCCTGTTCAGTCATGTTTTTTTCAGAGGGA GGGCTAACATCTGGCCATATTTTTCAACAAATTCAGAAGTGAGTAGAGAATGCATAGTAGCTGTCGGCAGAGGAGGAACCAGAATCTCTC CAAAGAAATTCCTCAAACAGAATTTCACACAGGGTATTCCATGGAGAATGAGCCTGGAATTGTCTCGCCATTTAAACGAGTATTCCTAAA AGGTGAAAAGAGTAGAGATAAGAAAGCCCATGAGAAGGTGACAGAGAGGCGCCCTCTGCACACTGTGGTGTTGTCATTGCCTGAGCGCGT CGAGCCAGACAGACTGCTGAGCGACTATATTGAGAAGGAGGTAAAGCTGTTTGCAGACAAGGTCCCAAAGACAGCAGAAAATTTTCGTGC TCTGAGCACTGGAGAGAAAGGATTTGGTTATAAGGGTTCCTGCTTTCACAGAATTATTCCAGGGTTTATGTGTCAGGGTGGTGACTTCAC ACGCCATAATGGCACTGGTGGCAAGTCCATCTATGGGGAGAAATTTGAAGATGAGAACTTCATCCTAAAGCATACGGGTCCTGGCATCTT GTCCATGGCAAATGCTGGACCCAACACAAATGGTTCCCAGTTTTTCATCTGCACTGCCAAGACTGAGTGGTAAGGGTACAACATGGCACA CTAACCACCTGACTAAATGAAAAGTTGCCCTGGGGGGAACGGAACAAACACTACTTTTCTTCAACCTTTGCTTCCACAGACTTTTTCATC >In-frame_ENST00000475551_ENST00000451562_TCGA-A7-A26G-01A_CCM2_chr7_45078025_+_PPIA_chr7_44838846_length(amino acids)=187AA_start in transcript=679_stop in transcript=1242 MHSSCRQRRNQNLSKEIPQTEFHTGYSMENEPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKL FADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFI -------------------------------------------------------------- >In-frame_ENST00000475551_ENST00000468812_TCGA-A7-A26G-01A_CCM2_chr7_45078025_+_PPIA_chr7_44838846_length(transcript)=3070nt_BP=946nt GAAGAAGTGAGCTTGGCCAGAGGCACGCTGTTTAATTTCAAAGTGCTGCTGACTCAAACTCATGAGTCCTGGAGGCAGGTAGAGGCACTT GTAGGCTGAGGACCCGTAGAGCCCGGTGTGCCCTGCCCAAGCCCCACCTGGGAATGGAGTTATCTCTGTAAAGATCTTGCTGCCTTTGAG CAAGCACTGCAAATGGGGTAACTGGAACAGCCTTGTCGCGTGTTTCCACCCTTCGTATGAGGCAGGTACCATGGGTCTTCACCAACAGCA CGGCCTGTTGTCTCCAGGAAATGGTAGCCCCTCACAGTGCTTTCTGTCTGCTTGTTTAGCTTTGGCATTTGAATGTGCAGAATGGTGGAC TTTGAAATTAATGTCCTTCTGTTGACTGCAGAATTTCTGCTGGAAATGCAGGGAGGCTGCTTGTGGGGTTCGCGTGCTGTGGGAAGTAGG GAAAATGAGCTGGTTTACTTTGTGTCTTTTTGTGCATGCAGACTGTTTGGATTTTGCCAACAGTTTCTGGGTGCTGCCTGCTTTTTAAAC TTTTAAAAAATTGTAAACAGCTTCAGTGGCTTTGCAGAAGGAAGCTGTGGTTTCTGGTCTTCCTGTTCAGTCATGTTTTTTTCAGAGGGA GGGCTAACATCTGGCCATATTTTTCAACAAATTCAGAAGTGAGTAGAGAATGCATAGTAGCTGTCGGCAGAGGAGGAACCAGAATCTCTC CAAAGAAATTCCTCAAACAGAATTTCACACAGGGTATTCCATGGAGAATGAGCCTGGAATTGTCTCGCCATTTAAACGAGTATTCCTAAA AGGTGAAAAGAGTAGAGATAAGAAAGCCCATGAGAAGGTGACAGAGAGGCGCCCTCTGCACACTGTGGTGTTGTCATTGCCTGAGCGCGT CGAGCCAGACAGACTGCTGAGCGACTATATTGAGAAGGAGGTAAAGCTGTTTGCAGACAAGGTCCCAAAGACAGCAGAAAATTTTCGTGC TCTGAGCACTGGAGAGAAAGGATTTGGTTATAAGGGTTCCTGCTTTCACAGAATTATTCCAGGGTTTATGTGTCAGGGTGGTGACTTCAC ACGCCATAATGGCACTGGTGGCAAGTCCATCTATGGGGAGAAATTTGAAGATGAGAACTTCATCCTAAAGCATACGGGTCCTGGCATCTT GTCCATGGCAAATGCTGGACCCAACACAAATGGTTCCCAGTTTTTCATCTGCACTGCCAAGACTGAGTGGTTGGATGGCAAGCATGTGGT GTTTGGCAAAGTGAAAGAAGGCATGAATATTGTGGAGGCCATGGAGCGCTTTGGGTCCAGGAATGGCAAGACCAGCAAGAAGATCACCAT TGCTGACTGTGGACAACTCGAATAAGTTTGACTTGTGTTTTATCTTAACCACCAGATCATTCCTTCTGTAGCTCAGGAGAGCACCCCTCC ACCCCATTTGCTCGCAGTATCCTAGAATCTTTGTGCTCTCGCTGCAGTTCCCTTTGGGTTCCATGTTTTCCTTGTTCCCTCCCATGCCTA GCTGGATTGCAGAGTTAAGTTTATGATTATGAAATAAAAACTAAATAACAATTGTCCTCGTTTGAGTTAAGAGTGTTGATGTAGGCTTTA TTTTAAGCAGTAATGGGTTACTTCTGAAACATCACTTGTTTGCTTAATTCTACACAGTACTTAGATTTTTTTTACTTTCCAGTCCCAGGA AGTGTCAATGTTTGTTGAGTGGAATATTGAAAATGTAGGCAGCAACTGGGCATGGTGGCTCACTGTCTGTAATGTATTACCTGAGGCAGA AGACCACCTGAGGGTAGGAGTCAAGATCAGCCTGGGCAACATAGTGAGACGCTGTCTCTACAAAAAATAATTAGCCTGGCCTGGTGGTGC ATGCCTAGTCCTAGCTGATCTGGAGGCTGACGTGGGAGGATTGCTTGAGCCTAGAGTGAGCTATTATCATGCCACTGTACAGCCTGGGTG TTCACAGATCTTGTGTCTCAAAGGTAGGCAGAGGCAGGAAAAGCAAGGAGCCAGAATTAAGAGGTTGGGTCAGTCTGCAGTGAGTTCATG CATTTAGAGGTGTTCTTCAAGATGACTAATGTCAAAAATTGAGACATCTGTTGCGGTTTTTTTTTTTTTTTTTTCCCCTGGAATGCAGTG GCGTGATCTCAGCTCACTGCAGCCTCCGCCTCCTGGGTTCAAGTGATTCTAGTGCCTCAGCCTCCTGAGTAGCTGGGATAATGGGCGTGT GCCACCATGCCCAGCTAATTTTTGTATTTTTAGTATAGATGGGGTTTCATCATTTTGACCAGGCTGGTCTCAAACTCTTGACCTCAGCTG ATGCGCCTGCCTTGGCCTCCCAAACTGCTGAGATTACAGATGTGAGCCACCGCACCCTACCTCATTTTCTGTAACAAAGCTAAGCTTGAA CACTGTTGATGTTCTTGAGGGAAGCATATTGGGCTTTAGGCTGTAGGTCAAGTTTATACATCTTAATTATGGTGGAATTCCTATGTAGAG TCTAAAAAGCCAGGTACTTGGTGCTACAGTCAGTCTCCCTGCAGAGGGTTAAGGCGCAGACTACCTGCAGTGAGGAGGTACTGCTTGTAG CATATAGAGCCTCTCCCTAGCTTTGGTTATGGAGGCTTTGAGGTTTTGCAAACCTGACCAATTTAAGCCATAAGATCTGGTCAAAGGGAT ACCCTTCCCACTAAGGACTTGGTTTCTCAGGAAATTATATGTACAGTGCTTGCTGGCAGTTAGATGTCAGGACAATCTAAGCTGAGAAAA CCCCTTCTCTGCCCACCTTAACAGACCTCTAGGGTTCTTAACCCAGCAATCAAGTTTGCCTATCCTAGAGGTGGCGGATTTGATCATTTG GTGTGTTGGGCAATTTTTGTTTTACTGTCTGGTTCCTTCTGCGTGAATTACCACCACCACCACTTGTGCATCTCAGTCTTGTGTGTTGTC TGGTTACGTATTCCCTGGGTGATACCATTCAATGTCTTAATGTACTTGTGGCTCAGACCTGAGTGCAAGGTGGAAATAAACATCAAACAT >In-frame_ENST00000475551_ENST00000468812_TCGA-A7-A26G-01A_CCM2_chr7_45078025_+_PPIA_chr7_44838846_length(amino acids)=231AA_start in transcript=679_stop in transcript=1374 MHSSCRQRRNQNLSKEIPQTEFHTGYSMENEPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKL FADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFI -------------------------------------------------------------- >In-frame_ENST00000381112_ENST00000451562_TCGA-A7-A26G-01A_CCM2_chr7_45078025_+_PPIA_chr7_44838846_length(transcript)=1376nt_BP=946nt GAAGAAGTGAGCTTGGCCAGAGGCACGCTGTTTAATTTCAAAGTGCTGCTGACTCAAACTCATGAGTCCTGGAGGCAGGTAGAGGCACTT GTAGGCTGAGGACCCGTAGAGCCCGGTGTGCCCTGCCCAAGCCCCACCTGGGAATGGAGTTATCTCTGTAAAGATCTTGCTGCCTTTGAG CAAGCACTGCAAATGGGGTAACTGGAACAGCCTTGTCGCGTGTTTCCACCCTTCGTATGAGGCAGGTACCATGGGTCTTCACCAACAGCA CGGCCTGTTGTCTCCAGGAAATGGTAGCCCCTCACAGTGCTTTCTGTCTGCTTGTTTAGCTTTGGCATTTGAATGTGCAGAATGGTGGAC TTTGAAATTAATGTCCTTCTGTTGACTGCAGAATTTCTGCTGGAAATGCAGGGAGGCTGCTTGTGGGGTTCGCGTGCTGTGGGAAGTAGG GAAAATGAGCTGGTTTACTTTGTGTCTTTTTGTGCATGCAGACTGTTTGGATTTTGCCAACAGTTTCTGGGTGCTGCCTGCTTTTTAAAC TTTTAAAAAATTGTAAACAGCTTCAGTGGCTTTGCAGAAGGAAGCTGTGGTTTCTGGTCTTCCTGTTCAGTCATGTTTTTTTCAGAGGGA GGGCTAACATCTGGCCATATTTTTCAACAAATTCAGAAGTGAGTAGAGAATGCATAGTAGCTGTCGGCAGAGGAGGAACCAGAATCTCTC CAAAGAAATTCCTCAAACAGAATTTCACACAGGGTATTCCATGGAGAATGAGCCTGGAATTGTCTCGCCATTTAAACGAGTATTCCTAAA AGGTGAAAAGAGTAGAGATAAGAAAGCCCATGAGAAGGTGACAGAGAGGCGCCCTCTGCACACTGTGGTGTTGTCATTGCCTGAGCGCGT CGAGCCAGACAGACTGCTGAGCGACTATATTGAGAAGGAGGTAAAGCTGTTTGCAGACAAGGTCCCAAAGACAGCAGAAAATTTTCGTGC TCTGAGCACTGGAGAGAAAGGATTTGGTTATAAGGGTTCCTGCTTTCACAGAATTATTCCAGGGTTTATGTGTCAGGGTGGTGACTTCAC ACGCCATAATGGCACTGGTGGCAAGTCCATCTATGGGGAGAAATTTGAAGATGAGAACTTCATCCTAAAGCATACGGGTCCTGGCATCTT GTCCATGGCAAATGCTGGACCCAACACAAATGGTTCCCAGTTTTTCATCTGCACTGCCAAGACTGAGTGGTAAGGGTACAACATGGCACA CTAACCACCTGACTAAATGAAAAGTTGCCCTGGGGGGAACGGAACAAACACTACTTTTCTTCAACCTTTGCTTCCACAGACTTTTTCATC >In-frame_ENST00000381112_ENST00000451562_TCGA-A7-A26G-01A_CCM2_chr7_45078025_+_PPIA_chr7_44838846_length(amino acids)=187AA_start in transcript=679_stop in transcript=1242 MHSSCRQRRNQNLSKEIPQTEFHTGYSMENEPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKL FADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFI -------------------------------------------------------------- >In-frame_ENST00000381112_ENST00000468812_TCGA-A7-A26G-01A_CCM2_chr7_45078025_+_PPIA_chr7_44838846_length(transcript)=3070nt_BP=946nt GAAGAAGTGAGCTTGGCCAGAGGCACGCTGTTTAATTTCAAAGTGCTGCTGACTCAAACTCATGAGTCCTGGAGGCAGGTAGAGGCACTT GTAGGCTGAGGACCCGTAGAGCCCGGTGTGCCCTGCCCAAGCCCCACCTGGGAATGGAGTTATCTCTGTAAAGATCTTGCTGCCTTTGAG CAAGCACTGCAAATGGGGTAACTGGAACAGCCTTGTCGCGTGTTTCCACCCTTCGTATGAGGCAGGTACCATGGGTCTTCACCAACAGCA CGGCCTGTTGTCTCCAGGAAATGGTAGCCCCTCACAGTGCTTTCTGTCTGCTTGTTTAGCTTTGGCATTTGAATGTGCAGAATGGTGGAC TTTGAAATTAATGTCCTTCTGTTGACTGCAGAATTTCTGCTGGAAATGCAGGGAGGCTGCTTGTGGGGTTCGCGTGCTGTGGGAAGTAGG GAAAATGAGCTGGTTTACTTTGTGTCTTTTTGTGCATGCAGACTGTTTGGATTTTGCCAACAGTTTCTGGGTGCTGCCTGCTTTTTAAAC TTTTAAAAAATTGTAAACAGCTTCAGTGGCTTTGCAGAAGGAAGCTGTGGTTTCTGGTCTTCCTGTTCAGTCATGTTTTTTTCAGAGGGA GGGCTAACATCTGGCCATATTTTTCAACAAATTCAGAAGTGAGTAGAGAATGCATAGTAGCTGTCGGCAGAGGAGGAACCAGAATCTCTC CAAAGAAATTCCTCAAACAGAATTTCACACAGGGTATTCCATGGAGAATGAGCCTGGAATTGTCTCGCCATTTAAACGAGTATTCCTAAA AGGTGAAAAGAGTAGAGATAAGAAAGCCCATGAGAAGGTGACAGAGAGGCGCCCTCTGCACACTGTGGTGTTGTCATTGCCTGAGCGCGT CGAGCCAGACAGACTGCTGAGCGACTATATTGAGAAGGAGGTAAAGCTGTTTGCAGACAAGGTCCCAAAGACAGCAGAAAATTTTCGTGC TCTGAGCACTGGAGAGAAAGGATTTGGTTATAAGGGTTCCTGCTTTCACAGAATTATTCCAGGGTTTATGTGTCAGGGTGGTGACTTCAC ACGCCATAATGGCACTGGTGGCAAGTCCATCTATGGGGAGAAATTTGAAGATGAGAACTTCATCCTAAAGCATACGGGTCCTGGCATCTT GTCCATGGCAAATGCTGGACCCAACACAAATGGTTCCCAGTTTTTCATCTGCACTGCCAAGACTGAGTGGTTGGATGGCAAGCATGTGGT GTTTGGCAAAGTGAAAGAAGGCATGAATATTGTGGAGGCCATGGAGCGCTTTGGGTCCAGGAATGGCAAGACCAGCAAGAAGATCACCAT TGCTGACTGTGGACAACTCGAATAAGTTTGACTTGTGTTTTATCTTAACCACCAGATCATTCCTTCTGTAGCTCAGGAGAGCACCCCTCC ACCCCATTTGCTCGCAGTATCCTAGAATCTTTGTGCTCTCGCTGCAGTTCCCTTTGGGTTCCATGTTTTCCTTGTTCCCTCCCATGCCTA GCTGGATTGCAGAGTTAAGTTTATGATTATGAAATAAAAACTAAATAACAATTGTCCTCGTTTGAGTTAAGAGTGTTGATGTAGGCTTTA TTTTAAGCAGTAATGGGTTACTTCTGAAACATCACTTGTTTGCTTAATTCTACACAGTACTTAGATTTTTTTTACTTTCCAGTCCCAGGA AGTGTCAATGTTTGTTGAGTGGAATATTGAAAATGTAGGCAGCAACTGGGCATGGTGGCTCACTGTCTGTAATGTATTACCTGAGGCAGA AGACCACCTGAGGGTAGGAGTCAAGATCAGCCTGGGCAACATAGTGAGACGCTGTCTCTACAAAAAATAATTAGCCTGGCCTGGTGGTGC ATGCCTAGTCCTAGCTGATCTGGAGGCTGACGTGGGAGGATTGCTTGAGCCTAGAGTGAGCTATTATCATGCCACTGTACAGCCTGGGTG TTCACAGATCTTGTGTCTCAAAGGTAGGCAGAGGCAGGAAAAGCAAGGAGCCAGAATTAAGAGGTTGGGTCAGTCTGCAGTGAGTTCATG CATTTAGAGGTGTTCTTCAAGATGACTAATGTCAAAAATTGAGACATCTGTTGCGGTTTTTTTTTTTTTTTTTTCCCCTGGAATGCAGTG GCGTGATCTCAGCTCACTGCAGCCTCCGCCTCCTGGGTTCAAGTGATTCTAGTGCCTCAGCCTCCTGAGTAGCTGGGATAATGGGCGTGT GCCACCATGCCCAGCTAATTTTTGTATTTTTAGTATAGATGGGGTTTCATCATTTTGACCAGGCTGGTCTCAAACTCTTGACCTCAGCTG ATGCGCCTGCCTTGGCCTCCCAAACTGCTGAGATTACAGATGTGAGCCACCGCACCCTACCTCATTTTCTGTAACAAAGCTAAGCTTGAA CACTGTTGATGTTCTTGAGGGAAGCATATTGGGCTTTAGGCTGTAGGTCAAGTTTATACATCTTAATTATGGTGGAATTCCTATGTAGAG TCTAAAAAGCCAGGTACTTGGTGCTACAGTCAGTCTCCCTGCAGAGGGTTAAGGCGCAGACTACCTGCAGTGAGGAGGTACTGCTTGTAG CATATAGAGCCTCTCCCTAGCTTTGGTTATGGAGGCTTTGAGGTTTTGCAAACCTGACCAATTTAAGCCATAAGATCTGGTCAAAGGGAT ACCCTTCCCACTAAGGACTTGGTTTCTCAGGAAATTATATGTACAGTGCTTGCTGGCAGTTAGATGTCAGGACAATCTAAGCTGAGAAAA CCCCTTCTCTGCCCACCTTAACAGACCTCTAGGGTTCTTAACCCAGCAATCAAGTTTGCCTATCCTAGAGGTGGCGGATTTGATCATTTG GTGTGTTGGGCAATTTTTGTTTTACTGTCTGGTTCCTTCTGCGTGAATTACCACCACCACCACTTGTGCATCTCAGTCTTGTGTGTTGTC TGGTTACGTATTCCCTGGGTGATACCATTCAATGTCTTAATGTACTTGTGGCTCAGACCTGAGTGCAAGGTGGAAATAAACATCAAACAT >In-frame_ENST00000381112_ENST00000468812_TCGA-A7-A26G-01A_CCM2_chr7_45078025_+_PPIA_chr7_44838846_length(amino acids)=231AA_start in transcript=679_stop in transcript=1374 MHSSCRQRRNQNLSKEIPQTEFHTGYSMENEPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKL FADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFI -------------------------------------------------------------- >In-frame_ENST00000474617_ENST00000451562_TCGA-A7-A26G-01A_CCM2_chr7_45078025_+_PPIA_chr7_44838846_length(transcript)=730nt_BP=300nt ATATTTTTCAACAAATTCAGAAGTGAGTAGAGAATGCATAGTAGCTGTCGGCAGAGGAGGAACCAGAATCTCTCCAAAGAAATTCCTCAA ACAGAATTTCACACAGGGTATTCCATGGAGAATGAGCCTGGAATTGTCTCGCCATTTAAACGAGTATTCCTAAAAGGTGAAAAGAGTAGA GATAAGAAAGCCCATGAGAAGGTGACAGAGAGGCGCCCTCTGCACACTGTGGTGTTGTCATTGCCTGAGCGCGTCGAGCCAGACAGACTG CTGAGCGACTATATTGAGAAGGAGGTAAAGCTGTTTGCAGACAAGGTCCCAAAGACAGCAGAAAATTTTCGTGCTCTGAGCACTGGAGAG AAAGGATTTGGTTATAAGGGTTCCTGCTTTCACAGAATTATTCCAGGGTTTATGTGTCAGGGTGGTGACTTCACACGCCATAATGGCACT GGTGGCAAGTCCATCTATGGGGAGAAATTTGAAGATGAGAACTTCATCCTAAAGCATACGGGTCCTGGCATCTTGTCCATGGCAAATGCT GGACCCAACACAAATGGTTCCCAGTTTTTCATCTGCACTGCCAAGACTGAGTGGTAAGGGTACAACATGGCACACTAACCACCTGACTAA ATGAAAAGTTGCCCTGGGGGGAACGGAACAAACACTACTTTTCTTCAACCTTTGCTTCCACAGACTTTTTCATCCCTAAGATACTAGAAG >In-frame_ENST00000474617_ENST00000451562_TCGA-A7-A26G-01A_CCM2_chr7_45078025_+_PPIA_chr7_44838846_length(amino acids)=187AA_start in transcript=33_stop in transcript=596 MHSSCRQRRNQNLSKEIPQTEFHTGYSMENEPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKL FADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFI -------------------------------------------------------------- >In-frame_ENST00000474617_ENST00000468812_TCGA-A7-A26G-01A_CCM2_chr7_45078025_+_PPIA_chr7_44838846_length(transcript)=2424nt_BP=300nt ATATTTTTCAACAAATTCAGAAGTGAGTAGAGAATGCATAGTAGCTGTCGGCAGAGGAGGAACCAGAATCTCTCCAAAGAAATTCCTCAA ACAGAATTTCACACAGGGTATTCCATGGAGAATGAGCCTGGAATTGTCTCGCCATTTAAACGAGTATTCCTAAAAGGTGAAAAGAGTAGA GATAAGAAAGCCCATGAGAAGGTGACAGAGAGGCGCCCTCTGCACACTGTGGTGTTGTCATTGCCTGAGCGCGTCGAGCCAGACAGACTG CTGAGCGACTATATTGAGAAGGAGGTAAAGCTGTTTGCAGACAAGGTCCCAAAGACAGCAGAAAATTTTCGTGCTCTGAGCACTGGAGAG AAAGGATTTGGTTATAAGGGTTCCTGCTTTCACAGAATTATTCCAGGGTTTATGTGTCAGGGTGGTGACTTCACACGCCATAATGGCACT GGTGGCAAGTCCATCTATGGGGAGAAATTTGAAGATGAGAACTTCATCCTAAAGCATACGGGTCCTGGCATCTTGTCCATGGCAAATGCT GGACCCAACACAAATGGTTCCCAGTTTTTCATCTGCACTGCCAAGACTGAGTGGTTGGATGGCAAGCATGTGGTGTTTGGCAAAGTGAAA GAAGGCATGAATATTGTGGAGGCCATGGAGCGCTTTGGGTCCAGGAATGGCAAGACCAGCAAGAAGATCACCATTGCTGACTGTGGACAA CTCGAATAAGTTTGACTTGTGTTTTATCTTAACCACCAGATCATTCCTTCTGTAGCTCAGGAGAGCACCCCTCCACCCCATTTGCTCGCA GTATCCTAGAATCTTTGTGCTCTCGCTGCAGTTCCCTTTGGGTTCCATGTTTTCCTTGTTCCCTCCCATGCCTAGCTGGATTGCAGAGTT AAGTTTATGATTATGAAATAAAAACTAAATAACAATTGTCCTCGTTTGAGTTAAGAGTGTTGATGTAGGCTTTATTTTAAGCAGTAATGG GTTACTTCTGAAACATCACTTGTTTGCTTAATTCTACACAGTACTTAGATTTTTTTTACTTTCCAGTCCCAGGAAGTGTCAATGTTTGTT GAGTGGAATATTGAAAATGTAGGCAGCAACTGGGCATGGTGGCTCACTGTCTGTAATGTATTACCTGAGGCAGAAGACCACCTGAGGGTA GGAGTCAAGATCAGCCTGGGCAACATAGTGAGACGCTGTCTCTACAAAAAATAATTAGCCTGGCCTGGTGGTGCATGCCTAGTCCTAGCT GATCTGGAGGCTGACGTGGGAGGATTGCTTGAGCCTAGAGTGAGCTATTATCATGCCACTGTACAGCCTGGGTGTTCACAGATCTTGTGT CTCAAAGGTAGGCAGAGGCAGGAAAAGCAAGGAGCCAGAATTAAGAGGTTGGGTCAGTCTGCAGTGAGTTCATGCATTTAGAGGTGTTCT TCAAGATGACTAATGTCAAAAATTGAGACATCTGTTGCGGTTTTTTTTTTTTTTTTTTCCCCTGGAATGCAGTGGCGTGATCTCAGCTCA CTGCAGCCTCCGCCTCCTGGGTTCAAGTGATTCTAGTGCCTCAGCCTCCTGAGTAGCTGGGATAATGGGCGTGTGCCACCATGCCCAGCT AATTTTTGTATTTTTAGTATAGATGGGGTTTCATCATTTTGACCAGGCTGGTCTCAAACTCTTGACCTCAGCTGATGCGCCTGCCTTGGC CTCCCAAACTGCTGAGATTACAGATGTGAGCCACCGCACCCTACCTCATTTTCTGTAACAAAGCTAAGCTTGAACACTGTTGATGTTCTT GAGGGAAGCATATTGGGCTTTAGGCTGTAGGTCAAGTTTATACATCTTAATTATGGTGGAATTCCTATGTAGAGTCTAAAAAGCCAGGTA CTTGGTGCTACAGTCAGTCTCCCTGCAGAGGGTTAAGGCGCAGACTACCTGCAGTGAGGAGGTACTGCTTGTAGCATATAGAGCCTCTCC CTAGCTTTGGTTATGGAGGCTTTGAGGTTTTGCAAACCTGACCAATTTAAGCCATAAGATCTGGTCAAAGGGATACCCTTCCCACTAAGG ACTTGGTTTCTCAGGAAATTATATGTACAGTGCTTGCTGGCAGTTAGATGTCAGGACAATCTAAGCTGAGAAAACCCCTTCTCTGCCCAC CTTAACAGACCTCTAGGGTTCTTAACCCAGCAATCAAGTTTGCCTATCCTAGAGGTGGCGGATTTGATCATTTGGTGTGTTGGGCAATTT TTGTTTTACTGTCTGGTTCCTTCTGCGTGAATTACCACCACCACCACTTGTGCATCTCAGTCTTGTGTGTTGTCTGGTTACGTATTCCCT >In-frame_ENST00000474617_ENST00000468812_TCGA-A7-A26G-01A_CCM2_chr7_45078025_+_PPIA_chr7_44838846_length(amino acids)=231AA_start in transcript=33_stop in transcript=728 MHSSCRQRRNQNLSKEIPQTEFHTGYSMENEPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKL FADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFI -------------------------------------------------------------- >In-frame_ENST00000258781_ENST00000451562_TCGA-A7-A26G_CCM2_chr7_45078025_+_PPIA_chr7_44838845_length(transcript)=783nt_BP=353nt GGGGCGCGGCCGGGGCGGAGACTTCGGGCCCGGCTGGCGGGCGGCGCCGGGAGCGCGGGGGCGGCGGGCCCGGGTCGAGCATGTAGCGGC TGCTGGCGGCGGGGCTCCCGGGGCGGGCCGGGCGGGCCGCGGGAGCCGCACGCGGCGATATGGAAGAGGAGGGCAAGAAGGGCAAGAAGC CTGGAATTGTCTCGCCATTTAAACGAGTATTCCTAAAAGGTGAAAAGAGTAGAGATAAGAAAGCCCATGAGAAGGTGACAGAGAGGCGCC CTCTGCACACTGTGGTGTTGTCATTGCCTGAGCGCGTCGAGCCAGACAGACTGCTGAGCGACTATATTGAGAAGGAGGTAAAGCTGTTTG CAGACAAGGTCCCAAAGACAGCAGAAAATTTTCGTGCTCTGAGCACTGGAGAGAAAGGATTTGGTTATAAGGGTTCCTGCTTTCACAGAA TTATTCCAGGGTTTATGTGTCAGGGTGGTGACTTCACACGCCATAATGGCACTGGTGGCAAGTCCATCTATGGGGAGAAATTTGAAGATG AGAACTTCATCCTAAAGCATACGGGTCCTGGCATCTTGTCCATGGCAAATGCTGGACCCAACACAAATGGTTCCCAGTTTTTCATCTGCA CTGCCAAGACTGAGTGGTAAGGGTACAACATGGCACACTAACCACCTGACTAAATGAAAAGTTGCCCTGGGGGGAACGGAACAAACACTA >In-frame_ENST00000258781_ENST00000451562_TCGA-A7-A26G_CCM2_chr7_45078025_+_PPIA_chr7_44838845_length(amino acids)=186AA_start in transcript=89_stop in transcript=649 MLAAGLPGRAGRAAGAARGDMEEEGKKGKKPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKLF ADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFIC -------------------------------------------------------------- >In-frame_ENST00000258781_ENST00000468812_TCGA-A7-A26G_CCM2_chr7_45078025_+_PPIA_chr7_44838845_length(transcript)=2477nt_BP=353nt GGGGCGCGGCCGGGGCGGAGACTTCGGGCCCGGCTGGCGGGCGGCGCCGGGAGCGCGGGGGCGGCGGGCCCGGGTCGAGCATGTAGCGGC TGCTGGCGGCGGGGCTCCCGGGGCGGGCCGGGCGGGCCGCGGGAGCCGCACGCGGCGATATGGAAGAGGAGGGCAAGAAGGGCAAGAAGC CTGGAATTGTCTCGCCATTTAAACGAGTATTCCTAAAAGGTGAAAAGAGTAGAGATAAGAAAGCCCATGAGAAGGTGACAGAGAGGCGCC CTCTGCACACTGTGGTGTTGTCATTGCCTGAGCGCGTCGAGCCAGACAGACTGCTGAGCGACTATATTGAGAAGGAGGTAAAGCTGTTTG CAGACAAGGTCCCAAAGACAGCAGAAAATTTTCGTGCTCTGAGCACTGGAGAGAAAGGATTTGGTTATAAGGGTTCCTGCTTTCACAGAA TTATTCCAGGGTTTATGTGTCAGGGTGGTGACTTCACACGCCATAATGGCACTGGTGGCAAGTCCATCTATGGGGAGAAATTTGAAGATG AGAACTTCATCCTAAAGCATACGGGTCCTGGCATCTTGTCCATGGCAAATGCTGGACCCAACACAAATGGTTCCCAGTTTTTCATCTGCA CTGCCAAGACTGAGTGGTTGGATGGCAAGCATGTGGTGTTTGGCAAAGTGAAAGAAGGCATGAATATTGTGGAGGCCATGGAGCGCTTTG GGTCCAGGAATGGCAAGACCAGCAAGAAGATCACCATTGCTGACTGTGGACAACTCGAATAAGTTTGACTTGTGTTTTATCTTAACCACC AGATCATTCCTTCTGTAGCTCAGGAGAGCACCCCTCCACCCCATTTGCTCGCAGTATCCTAGAATCTTTGTGCTCTCGCTGCAGTTCCCT TTGGGTTCCATGTTTTCCTTGTTCCCTCCCATGCCTAGCTGGATTGCAGAGTTAAGTTTATGATTATGAAATAAAAACTAAATAACAATT GTCCTCGTTTGAGTTAAGAGTGTTGATGTAGGCTTTATTTTAAGCAGTAATGGGTTACTTCTGAAACATCACTTGTTTGCTTAATTCTAC ACAGTACTTAGATTTTTTTTACTTTCCAGTCCCAGGAAGTGTCAATGTTTGTTGAGTGGAATATTGAAAATGTAGGCAGCAACTGGGCAT GGTGGCTCACTGTCTGTAATGTATTACCTGAGGCAGAAGACCACCTGAGGGTAGGAGTCAAGATCAGCCTGGGCAACATAGTGAGACGCT GTCTCTACAAAAAATAATTAGCCTGGCCTGGTGGTGCATGCCTAGTCCTAGCTGATCTGGAGGCTGACGTGGGAGGATTGCTTGAGCCTA GAGTGAGCTATTATCATGCCACTGTACAGCCTGGGTGTTCACAGATCTTGTGTCTCAAAGGTAGGCAGAGGCAGGAAAAGCAAGGAGCCA GAATTAAGAGGTTGGGTCAGTCTGCAGTGAGTTCATGCATTTAGAGGTGTTCTTCAAGATGACTAATGTCAAAAATTGAGACATCTGTTG CGGTTTTTTTTTTTTTTTTTTCCCCTGGAATGCAGTGGCGTGATCTCAGCTCACTGCAGCCTCCGCCTCCTGGGTTCAAGTGATTCTAGT GCCTCAGCCTCCTGAGTAGCTGGGATAATGGGCGTGTGCCACCATGCCCAGCTAATTTTTGTATTTTTAGTATAGATGGGGTTTCATCAT TTTGACCAGGCTGGTCTCAAACTCTTGACCTCAGCTGATGCGCCTGCCTTGGCCTCCCAAACTGCTGAGATTACAGATGTGAGCCACCGC ACCCTACCTCATTTTCTGTAACAAAGCTAAGCTTGAACACTGTTGATGTTCTTGAGGGAAGCATATTGGGCTTTAGGCTGTAGGTCAAGT TTATACATCTTAATTATGGTGGAATTCCTATGTAGAGTCTAAAAAGCCAGGTACTTGGTGCTACAGTCAGTCTCCCTGCAGAGGGTTAAG GCGCAGACTACCTGCAGTGAGGAGGTACTGCTTGTAGCATATAGAGCCTCTCCCTAGCTTTGGTTATGGAGGCTTTGAGGTTTTGCAAAC CTGACCAATTTAAGCCATAAGATCTGGTCAAAGGGATACCCTTCCCACTAAGGACTTGGTTTCTCAGGAAATTATATGTACAGTGCTTGC TGGCAGTTAGATGTCAGGACAATCTAAGCTGAGAAAACCCCTTCTCTGCCCACCTTAACAGACCTCTAGGGTTCTTAACCCAGCAATCAA GTTTGCCTATCCTAGAGGTGGCGGATTTGATCATTTGGTGTGTTGGGCAATTTTTGTTTTACTGTCTGGTTCCTTCTGCGTGAATTACCA CCACCACCACTTGTGCATCTCAGTCTTGTGTGTTGTCTGGTTACGTATTCCCTGGGTGATACCATTCAATGTCTTAATGTACTTGTGGCT >In-frame_ENST00000258781_ENST00000468812_TCGA-A7-A26G_CCM2_chr7_45078025_+_PPIA_chr7_44838845_length(amino acids)=230AA_start in transcript=89_stop in transcript=781 MLAAGLPGRAGRAAGAARGDMEEEGKKGKKPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKLF ADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFIC -------------------------------------------------------------- >In-frame_ENST00000544363_ENST00000451562_TCGA-A7-A26G_CCM2_chr7_45078025_+_PPIA_chr7_44838845_length(transcript)=780nt_BP=350nt GCGCGGCCGGGGCGGAGACTTCGGGCCCGGCTGGCGGGCGGCGCCGGGAGCGCGGGGGCGGCGGGCCCGGGTCGAGCATGTAGCGGCTGC TGGCGGCGGGGCTCCCGGGGCGGGCCGGGCGGGCCGCGGGAGCCGCACGCGGCGATATGGAAGAGGAGGGCAAGAAGGGCAAGAAGCCTG GAATTGTCTCGCCATTTAAACGAGTATTCCTAAAAGGTGAAAAGAGTAGAGATAAGAAAGCCCATGAGAAGGTGACAGAGAGGCGCCCTC TGCACACTGTGGTGTTGTCATTGCCTGAGCGCGTCGAGCCAGACAGACTGCTGAGCGACTATATTGAGAAGGAGGTAAAGCTGTTTGCAG ACAAGGTCCCAAAGACAGCAGAAAATTTTCGTGCTCTGAGCACTGGAGAGAAAGGATTTGGTTATAAGGGTTCCTGCTTTCACAGAATTA TTCCAGGGTTTATGTGTCAGGGTGGTGACTTCACACGCCATAATGGCACTGGTGGCAAGTCCATCTATGGGGAGAAATTTGAAGATGAGA ACTTCATCCTAAAGCATACGGGTCCTGGCATCTTGTCCATGGCAAATGCTGGACCCAACACAAATGGTTCCCAGTTTTTCATCTGCACTG CCAAGACTGAGTGGTAAGGGTACAACATGGCACACTAACCACCTGACTAAATGAAAAGTTGCCCTGGGGGGAACGGAACAAACACTACTT >In-frame_ENST00000544363_ENST00000451562_TCGA-A7-A26G_CCM2_chr7_45078025_+_PPIA_chr7_44838845_length(amino acids)=186AA_start in transcript=86_stop in transcript=646 MLAAGLPGRAGRAAGAARGDMEEEGKKGKKPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKLF ADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFIC -------------------------------------------------------------- >In-frame_ENST00000544363_ENST00000468812_TCGA-A7-A26G_CCM2_chr7_45078025_+_PPIA_chr7_44838845_length(transcript)=2474nt_BP=350nt GCGCGGCCGGGGCGGAGACTTCGGGCCCGGCTGGCGGGCGGCGCCGGGAGCGCGGGGGCGGCGGGCCCGGGTCGAGCATGTAGCGGCTGC TGGCGGCGGGGCTCCCGGGGCGGGCCGGGCGGGCCGCGGGAGCCGCACGCGGCGATATGGAAGAGGAGGGCAAGAAGGGCAAGAAGCCTG GAATTGTCTCGCCATTTAAACGAGTATTCCTAAAAGGTGAAAAGAGTAGAGATAAGAAAGCCCATGAGAAGGTGACAGAGAGGCGCCCTC TGCACACTGTGGTGTTGTCATTGCCTGAGCGCGTCGAGCCAGACAGACTGCTGAGCGACTATATTGAGAAGGAGGTAAAGCTGTTTGCAG ACAAGGTCCCAAAGACAGCAGAAAATTTTCGTGCTCTGAGCACTGGAGAGAAAGGATTTGGTTATAAGGGTTCCTGCTTTCACAGAATTA TTCCAGGGTTTATGTGTCAGGGTGGTGACTTCACACGCCATAATGGCACTGGTGGCAAGTCCATCTATGGGGAGAAATTTGAAGATGAGA ACTTCATCCTAAAGCATACGGGTCCTGGCATCTTGTCCATGGCAAATGCTGGACCCAACACAAATGGTTCCCAGTTTTTCATCTGCACTG CCAAGACTGAGTGGTTGGATGGCAAGCATGTGGTGTTTGGCAAAGTGAAAGAAGGCATGAATATTGTGGAGGCCATGGAGCGCTTTGGGT CCAGGAATGGCAAGACCAGCAAGAAGATCACCATTGCTGACTGTGGACAACTCGAATAAGTTTGACTTGTGTTTTATCTTAACCACCAGA TCATTCCTTCTGTAGCTCAGGAGAGCACCCCTCCACCCCATTTGCTCGCAGTATCCTAGAATCTTTGTGCTCTCGCTGCAGTTCCCTTTG GGTTCCATGTTTTCCTTGTTCCCTCCCATGCCTAGCTGGATTGCAGAGTTAAGTTTATGATTATGAAATAAAAACTAAATAACAATTGTC CTCGTTTGAGTTAAGAGTGTTGATGTAGGCTTTATTTTAAGCAGTAATGGGTTACTTCTGAAACATCACTTGTTTGCTTAATTCTACACA GTACTTAGATTTTTTTTACTTTCCAGTCCCAGGAAGTGTCAATGTTTGTTGAGTGGAATATTGAAAATGTAGGCAGCAACTGGGCATGGT GGCTCACTGTCTGTAATGTATTACCTGAGGCAGAAGACCACCTGAGGGTAGGAGTCAAGATCAGCCTGGGCAACATAGTGAGACGCTGTC TCTACAAAAAATAATTAGCCTGGCCTGGTGGTGCATGCCTAGTCCTAGCTGATCTGGAGGCTGACGTGGGAGGATTGCTTGAGCCTAGAG TGAGCTATTATCATGCCACTGTACAGCCTGGGTGTTCACAGATCTTGTGTCTCAAAGGTAGGCAGAGGCAGGAAAAGCAAGGAGCCAGAA TTAAGAGGTTGGGTCAGTCTGCAGTGAGTTCATGCATTTAGAGGTGTTCTTCAAGATGACTAATGTCAAAAATTGAGACATCTGTTGCGG TTTTTTTTTTTTTTTTTTCCCCTGGAATGCAGTGGCGTGATCTCAGCTCACTGCAGCCTCCGCCTCCTGGGTTCAAGTGATTCTAGTGCC TCAGCCTCCTGAGTAGCTGGGATAATGGGCGTGTGCCACCATGCCCAGCTAATTTTTGTATTTTTAGTATAGATGGGGTTTCATCATTTT GACCAGGCTGGTCTCAAACTCTTGACCTCAGCTGATGCGCCTGCCTTGGCCTCCCAAACTGCTGAGATTACAGATGTGAGCCACCGCACC CTACCTCATTTTCTGTAACAAAGCTAAGCTTGAACACTGTTGATGTTCTTGAGGGAAGCATATTGGGCTTTAGGCTGTAGGTCAAGTTTA TACATCTTAATTATGGTGGAATTCCTATGTAGAGTCTAAAAAGCCAGGTACTTGGTGCTACAGTCAGTCTCCCTGCAGAGGGTTAAGGCG CAGACTACCTGCAGTGAGGAGGTACTGCTTGTAGCATATAGAGCCTCTCCCTAGCTTTGGTTATGGAGGCTTTGAGGTTTTGCAAACCTG ACCAATTTAAGCCATAAGATCTGGTCAAAGGGATACCCTTCCCACTAAGGACTTGGTTTCTCAGGAAATTATATGTACAGTGCTTGCTGG CAGTTAGATGTCAGGACAATCTAAGCTGAGAAAACCCCTTCTCTGCCCACCTTAACAGACCTCTAGGGTTCTTAACCCAGCAATCAAGTT TGCCTATCCTAGAGGTGGCGGATTTGATCATTTGGTGTGTTGGGCAATTTTTGTTTTACTGTCTGGTTCCTTCTGCGTGAATTACCACCA CCACCACTTGTGCATCTCAGTCTTGTGTGTTGTCTGGTTACGTATTCCCTGGGTGATACCATTCAATGTCTTAATGTACTTGTGGCTCAG >In-frame_ENST00000544363_ENST00000468812_TCGA-A7-A26G_CCM2_chr7_45078025_+_PPIA_chr7_44838845_length(amino acids)=230AA_start in transcript=86_stop in transcript=778 MLAAGLPGRAGRAAGAARGDMEEEGKKGKKPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKLF ADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFIC -------------------------------------------------------------- >In-frame_ENST00000475551_ENST00000451562_TCGA-A7-A26G_CCM2_chr7_45078025_+_PPIA_chr7_44838845_length(transcript)=1376nt_BP=946nt GAAGAAGTGAGCTTGGCCAGAGGCACGCTGTTTAATTTCAAAGTGCTGCTGACTCAAACTCATGAGTCCTGGAGGCAGGTAGAGGCACTT GTAGGCTGAGGACCCGTAGAGCCCGGTGTGCCCTGCCCAAGCCCCACCTGGGAATGGAGTTATCTCTGTAAAGATCTTGCTGCCTTTGAG CAAGCACTGCAAATGGGGTAACTGGAACAGCCTTGTCGCGTGTTTCCACCCTTCGTATGAGGCAGGTACCATGGGTCTTCACCAACAGCA CGGCCTGTTGTCTCCAGGAAATGGTAGCCCCTCACAGTGCTTTCTGTCTGCTTGTTTAGCTTTGGCATTTGAATGTGCAGAATGGTGGAC TTTGAAATTAATGTCCTTCTGTTGACTGCAGAATTTCTGCTGGAAATGCAGGGAGGCTGCTTGTGGGGTTCGCGTGCTGTGGGAAGTAGG GAAAATGAGCTGGTTTACTTTGTGTCTTTTTGTGCATGCAGACTGTTTGGATTTTGCCAACAGTTTCTGGGTGCTGCCTGCTTTTTAAAC TTTTAAAAAATTGTAAACAGCTTCAGTGGCTTTGCAGAAGGAAGCTGTGGTTTCTGGTCTTCCTGTTCAGTCATGTTTTTTTCAGAGGGA GGGCTAACATCTGGCCATATTTTTCAACAAATTCAGAAGTGAGTAGAGAATGCATAGTAGCTGTCGGCAGAGGAGGAACCAGAATCTCTC CAAAGAAATTCCTCAAACAGAATTTCACACAGGGTATTCCATGGAGAATGAGCCTGGAATTGTCTCGCCATTTAAACGAGTATTCCTAAA AGGTGAAAAGAGTAGAGATAAGAAAGCCCATGAGAAGGTGACAGAGAGGCGCCCTCTGCACACTGTGGTGTTGTCATTGCCTGAGCGCGT CGAGCCAGACAGACTGCTGAGCGACTATATTGAGAAGGAGGTAAAGCTGTTTGCAGACAAGGTCCCAAAGACAGCAGAAAATTTTCGTGC TCTGAGCACTGGAGAGAAAGGATTTGGTTATAAGGGTTCCTGCTTTCACAGAATTATTCCAGGGTTTATGTGTCAGGGTGGTGACTTCAC ACGCCATAATGGCACTGGTGGCAAGTCCATCTATGGGGAGAAATTTGAAGATGAGAACTTCATCCTAAAGCATACGGGTCCTGGCATCTT GTCCATGGCAAATGCTGGACCCAACACAAATGGTTCCCAGTTTTTCATCTGCACTGCCAAGACTGAGTGGTAAGGGTACAACATGGCACA CTAACCACCTGACTAAATGAAAAGTTGCCCTGGGGGGAACGGAACAAACACTACTTTTCTTCAACCTTTGCTTCCACAGACTTTTTCATC >In-frame_ENST00000475551_ENST00000451562_TCGA-A7-A26G_CCM2_chr7_45078025_+_PPIA_chr7_44838845_length(amino acids)=187AA_start in transcript=679_stop in transcript=1242 MHSSCRQRRNQNLSKEIPQTEFHTGYSMENEPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKL FADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFI -------------------------------------------------------------- >In-frame_ENST00000475551_ENST00000468812_TCGA-A7-A26G_CCM2_chr7_45078025_+_PPIA_chr7_44838845_length(transcript)=3070nt_BP=946nt GAAGAAGTGAGCTTGGCCAGAGGCACGCTGTTTAATTTCAAAGTGCTGCTGACTCAAACTCATGAGTCCTGGAGGCAGGTAGAGGCACTT GTAGGCTGAGGACCCGTAGAGCCCGGTGTGCCCTGCCCAAGCCCCACCTGGGAATGGAGTTATCTCTGTAAAGATCTTGCTGCCTTTGAG CAAGCACTGCAAATGGGGTAACTGGAACAGCCTTGTCGCGTGTTTCCACCCTTCGTATGAGGCAGGTACCATGGGTCTTCACCAACAGCA CGGCCTGTTGTCTCCAGGAAATGGTAGCCCCTCACAGTGCTTTCTGTCTGCTTGTTTAGCTTTGGCATTTGAATGTGCAGAATGGTGGAC TTTGAAATTAATGTCCTTCTGTTGACTGCAGAATTTCTGCTGGAAATGCAGGGAGGCTGCTTGTGGGGTTCGCGTGCTGTGGGAAGTAGG GAAAATGAGCTGGTTTACTTTGTGTCTTTTTGTGCATGCAGACTGTTTGGATTTTGCCAACAGTTTCTGGGTGCTGCCTGCTTTTTAAAC TTTTAAAAAATTGTAAACAGCTTCAGTGGCTTTGCAGAAGGAAGCTGTGGTTTCTGGTCTTCCTGTTCAGTCATGTTTTTTTCAGAGGGA GGGCTAACATCTGGCCATATTTTTCAACAAATTCAGAAGTGAGTAGAGAATGCATAGTAGCTGTCGGCAGAGGAGGAACCAGAATCTCTC CAAAGAAATTCCTCAAACAGAATTTCACACAGGGTATTCCATGGAGAATGAGCCTGGAATTGTCTCGCCATTTAAACGAGTATTCCTAAA AGGTGAAAAGAGTAGAGATAAGAAAGCCCATGAGAAGGTGACAGAGAGGCGCCCTCTGCACACTGTGGTGTTGTCATTGCCTGAGCGCGT CGAGCCAGACAGACTGCTGAGCGACTATATTGAGAAGGAGGTAAAGCTGTTTGCAGACAAGGTCCCAAAGACAGCAGAAAATTTTCGTGC TCTGAGCACTGGAGAGAAAGGATTTGGTTATAAGGGTTCCTGCTTTCACAGAATTATTCCAGGGTTTATGTGTCAGGGTGGTGACTTCAC ACGCCATAATGGCACTGGTGGCAAGTCCATCTATGGGGAGAAATTTGAAGATGAGAACTTCATCCTAAAGCATACGGGTCCTGGCATCTT GTCCATGGCAAATGCTGGACCCAACACAAATGGTTCCCAGTTTTTCATCTGCACTGCCAAGACTGAGTGGTTGGATGGCAAGCATGTGGT GTTTGGCAAAGTGAAAGAAGGCATGAATATTGTGGAGGCCATGGAGCGCTTTGGGTCCAGGAATGGCAAGACCAGCAAGAAGATCACCAT TGCTGACTGTGGACAACTCGAATAAGTTTGACTTGTGTTTTATCTTAACCACCAGATCATTCCTTCTGTAGCTCAGGAGAGCACCCCTCC ACCCCATTTGCTCGCAGTATCCTAGAATCTTTGTGCTCTCGCTGCAGTTCCCTTTGGGTTCCATGTTTTCCTTGTTCCCTCCCATGCCTA GCTGGATTGCAGAGTTAAGTTTATGATTATGAAATAAAAACTAAATAACAATTGTCCTCGTTTGAGTTAAGAGTGTTGATGTAGGCTTTA TTTTAAGCAGTAATGGGTTACTTCTGAAACATCACTTGTTTGCTTAATTCTACACAGTACTTAGATTTTTTTTACTTTCCAGTCCCAGGA AGTGTCAATGTTTGTTGAGTGGAATATTGAAAATGTAGGCAGCAACTGGGCATGGTGGCTCACTGTCTGTAATGTATTACCTGAGGCAGA AGACCACCTGAGGGTAGGAGTCAAGATCAGCCTGGGCAACATAGTGAGACGCTGTCTCTACAAAAAATAATTAGCCTGGCCTGGTGGTGC ATGCCTAGTCCTAGCTGATCTGGAGGCTGACGTGGGAGGATTGCTTGAGCCTAGAGTGAGCTATTATCATGCCACTGTACAGCCTGGGTG TTCACAGATCTTGTGTCTCAAAGGTAGGCAGAGGCAGGAAAAGCAAGGAGCCAGAATTAAGAGGTTGGGTCAGTCTGCAGTGAGTTCATG CATTTAGAGGTGTTCTTCAAGATGACTAATGTCAAAAATTGAGACATCTGTTGCGGTTTTTTTTTTTTTTTTTTCCCCTGGAATGCAGTG GCGTGATCTCAGCTCACTGCAGCCTCCGCCTCCTGGGTTCAAGTGATTCTAGTGCCTCAGCCTCCTGAGTAGCTGGGATAATGGGCGTGT GCCACCATGCCCAGCTAATTTTTGTATTTTTAGTATAGATGGGGTTTCATCATTTTGACCAGGCTGGTCTCAAACTCTTGACCTCAGCTG ATGCGCCTGCCTTGGCCTCCCAAACTGCTGAGATTACAGATGTGAGCCACCGCACCCTACCTCATTTTCTGTAACAAAGCTAAGCTTGAA CACTGTTGATGTTCTTGAGGGAAGCATATTGGGCTTTAGGCTGTAGGTCAAGTTTATACATCTTAATTATGGTGGAATTCCTATGTAGAG TCTAAAAAGCCAGGTACTTGGTGCTACAGTCAGTCTCCCTGCAGAGGGTTAAGGCGCAGACTACCTGCAGTGAGGAGGTACTGCTTGTAG CATATAGAGCCTCTCCCTAGCTTTGGTTATGGAGGCTTTGAGGTTTTGCAAACCTGACCAATTTAAGCCATAAGATCTGGTCAAAGGGAT ACCCTTCCCACTAAGGACTTGGTTTCTCAGGAAATTATATGTACAGTGCTTGCTGGCAGTTAGATGTCAGGACAATCTAAGCTGAGAAAA CCCCTTCTCTGCCCACCTTAACAGACCTCTAGGGTTCTTAACCCAGCAATCAAGTTTGCCTATCCTAGAGGTGGCGGATTTGATCATTTG GTGTGTTGGGCAATTTTTGTTTTACTGTCTGGTTCCTTCTGCGTGAATTACCACCACCACCACTTGTGCATCTCAGTCTTGTGTGTTGTC TGGTTACGTATTCCCTGGGTGATACCATTCAATGTCTTAATGTACTTGTGGCTCAGACCTGAGTGCAAGGTGGAAATAAACATCAAACAT >In-frame_ENST00000475551_ENST00000468812_TCGA-A7-A26G_CCM2_chr7_45078025_+_PPIA_chr7_44838845_length(amino acids)=231AA_start in transcript=679_stop in transcript=1374 MHSSCRQRRNQNLSKEIPQTEFHTGYSMENEPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKL FADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFI -------------------------------------------------------------- >In-frame_ENST00000381112_ENST00000451562_TCGA-A7-A26G_CCM2_chr7_45078025_+_PPIA_chr7_44838845_length(transcript)=1376nt_BP=946nt GAAGAAGTGAGCTTGGCCAGAGGCACGCTGTTTAATTTCAAAGTGCTGCTGACTCAAACTCATGAGTCCTGGAGGCAGGTAGAGGCACTT GTAGGCTGAGGACCCGTAGAGCCCGGTGTGCCCTGCCCAAGCCCCACCTGGGAATGGAGTTATCTCTGTAAAGATCTTGCTGCCTTTGAG CAAGCACTGCAAATGGGGTAACTGGAACAGCCTTGTCGCGTGTTTCCACCCTTCGTATGAGGCAGGTACCATGGGTCTTCACCAACAGCA CGGCCTGTTGTCTCCAGGAAATGGTAGCCCCTCACAGTGCTTTCTGTCTGCTTGTTTAGCTTTGGCATTTGAATGTGCAGAATGGTGGAC TTTGAAATTAATGTCCTTCTGTTGACTGCAGAATTTCTGCTGGAAATGCAGGGAGGCTGCTTGTGGGGTTCGCGTGCTGTGGGAAGTAGG GAAAATGAGCTGGTTTACTTTGTGTCTTTTTGTGCATGCAGACTGTTTGGATTTTGCCAACAGTTTCTGGGTGCTGCCTGCTTTTTAAAC TTTTAAAAAATTGTAAACAGCTTCAGTGGCTTTGCAGAAGGAAGCTGTGGTTTCTGGTCTTCCTGTTCAGTCATGTTTTTTTCAGAGGGA GGGCTAACATCTGGCCATATTTTTCAACAAATTCAGAAGTGAGTAGAGAATGCATAGTAGCTGTCGGCAGAGGAGGAACCAGAATCTCTC CAAAGAAATTCCTCAAACAGAATTTCACACAGGGTATTCCATGGAGAATGAGCCTGGAATTGTCTCGCCATTTAAACGAGTATTCCTAAA AGGTGAAAAGAGTAGAGATAAGAAAGCCCATGAGAAGGTGACAGAGAGGCGCCCTCTGCACACTGTGGTGTTGTCATTGCCTGAGCGCGT CGAGCCAGACAGACTGCTGAGCGACTATATTGAGAAGGAGGTAAAGCTGTTTGCAGACAAGGTCCCAAAGACAGCAGAAAATTTTCGTGC TCTGAGCACTGGAGAGAAAGGATTTGGTTATAAGGGTTCCTGCTTTCACAGAATTATTCCAGGGTTTATGTGTCAGGGTGGTGACTTCAC ACGCCATAATGGCACTGGTGGCAAGTCCATCTATGGGGAGAAATTTGAAGATGAGAACTTCATCCTAAAGCATACGGGTCCTGGCATCTT GTCCATGGCAAATGCTGGACCCAACACAAATGGTTCCCAGTTTTTCATCTGCACTGCCAAGACTGAGTGGTAAGGGTACAACATGGCACA CTAACCACCTGACTAAATGAAAAGTTGCCCTGGGGGGAACGGAACAAACACTACTTTTCTTCAACCTTTGCTTCCACAGACTTTTTCATC >In-frame_ENST00000381112_ENST00000451562_TCGA-A7-A26G_CCM2_chr7_45078025_+_PPIA_chr7_44838845_length(amino acids)=187AA_start in transcript=679_stop in transcript=1242 MHSSCRQRRNQNLSKEIPQTEFHTGYSMENEPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKL FADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFI -------------------------------------------------------------- >In-frame_ENST00000381112_ENST00000468812_TCGA-A7-A26G_CCM2_chr7_45078025_+_PPIA_chr7_44838845_length(transcript)=3070nt_BP=946nt GAAGAAGTGAGCTTGGCCAGAGGCACGCTGTTTAATTTCAAAGTGCTGCTGACTCAAACTCATGAGTCCTGGAGGCAGGTAGAGGCACTT GTAGGCTGAGGACCCGTAGAGCCCGGTGTGCCCTGCCCAAGCCCCACCTGGGAATGGAGTTATCTCTGTAAAGATCTTGCTGCCTTTGAG CAAGCACTGCAAATGGGGTAACTGGAACAGCCTTGTCGCGTGTTTCCACCCTTCGTATGAGGCAGGTACCATGGGTCTTCACCAACAGCA CGGCCTGTTGTCTCCAGGAAATGGTAGCCCCTCACAGTGCTTTCTGTCTGCTTGTTTAGCTTTGGCATTTGAATGTGCAGAATGGTGGAC TTTGAAATTAATGTCCTTCTGTTGACTGCAGAATTTCTGCTGGAAATGCAGGGAGGCTGCTTGTGGGGTTCGCGTGCTGTGGGAAGTAGG GAAAATGAGCTGGTTTACTTTGTGTCTTTTTGTGCATGCAGACTGTTTGGATTTTGCCAACAGTTTCTGGGTGCTGCCTGCTTTTTAAAC TTTTAAAAAATTGTAAACAGCTTCAGTGGCTTTGCAGAAGGAAGCTGTGGTTTCTGGTCTTCCTGTTCAGTCATGTTTTTTTCAGAGGGA GGGCTAACATCTGGCCATATTTTTCAACAAATTCAGAAGTGAGTAGAGAATGCATAGTAGCTGTCGGCAGAGGAGGAACCAGAATCTCTC CAAAGAAATTCCTCAAACAGAATTTCACACAGGGTATTCCATGGAGAATGAGCCTGGAATTGTCTCGCCATTTAAACGAGTATTCCTAAA AGGTGAAAAGAGTAGAGATAAGAAAGCCCATGAGAAGGTGACAGAGAGGCGCCCTCTGCACACTGTGGTGTTGTCATTGCCTGAGCGCGT CGAGCCAGACAGACTGCTGAGCGACTATATTGAGAAGGAGGTAAAGCTGTTTGCAGACAAGGTCCCAAAGACAGCAGAAAATTTTCGTGC TCTGAGCACTGGAGAGAAAGGATTTGGTTATAAGGGTTCCTGCTTTCACAGAATTATTCCAGGGTTTATGTGTCAGGGTGGTGACTTCAC ACGCCATAATGGCACTGGTGGCAAGTCCATCTATGGGGAGAAATTTGAAGATGAGAACTTCATCCTAAAGCATACGGGTCCTGGCATCTT GTCCATGGCAAATGCTGGACCCAACACAAATGGTTCCCAGTTTTTCATCTGCACTGCCAAGACTGAGTGGTTGGATGGCAAGCATGTGGT GTTTGGCAAAGTGAAAGAAGGCATGAATATTGTGGAGGCCATGGAGCGCTTTGGGTCCAGGAATGGCAAGACCAGCAAGAAGATCACCAT TGCTGACTGTGGACAACTCGAATAAGTTTGACTTGTGTTTTATCTTAACCACCAGATCATTCCTTCTGTAGCTCAGGAGAGCACCCCTCC ACCCCATTTGCTCGCAGTATCCTAGAATCTTTGTGCTCTCGCTGCAGTTCCCTTTGGGTTCCATGTTTTCCTTGTTCCCTCCCATGCCTA GCTGGATTGCAGAGTTAAGTTTATGATTATGAAATAAAAACTAAATAACAATTGTCCTCGTTTGAGTTAAGAGTGTTGATGTAGGCTTTA TTTTAAGCAGTAATGGGTTACTTCTGAAACATCACTTGTTTGCTTAATTCTACACAGTACTTAGATTTTTTTTACTTTCCAGTCCCAGGA AGTGTCAATGTTTGTTGAGTGGAATATTGAAAATGTAGGCAGCAACTGGGCATGGTGGCTCACTGTCTGTAATGTATTACCTGAGGCAGA AGACCACCTGAGGGTAGGAGTCAAGATCAGCCTGGGCAACATAGTGAGACGCTGTCTCTACAAAAAATAATTAGCCTGGCCTGGTGGTGC ATGCCTAGTCCTAGCTGATCTGGAGGCTGACGTGGGAGGATTGCTTGAGCCTAGAGTGAGCTATTATCATGCCACTGTACAGCCTGGGTG TTCACAGATCTTGTGTCTCAAAGGTAGGCAGAGGCAGGAAAAGCAAGGAGCCAGAATTAAGAGGTTGGGTCAGTCTGCAGTGAGTTCATG CATTTAGAGGTGTTCTTCAAGATGACTAATGTCAAAAATTGAGACATCTGTTGCGGTTTTTTTTTTTTTTTTTTCCCCTGGAATGCAGTG GCGTGATCTCAGCTCACTGCAGCCTCCGCCTCCTGGGTTCAAGTGATTCTAGTGCCTCAGCCTCCTGAGTAGCTGGGATAATGGGCGTGT GCCACCATGCCCAGCTAATTTTTGTATTTTTAGTATAGATGGGGTTTCATCATTTTGACCAGGCTGGTCTCAAACTCTTGACCTCAGCTG ATGCGCCTGCCTTGGCCTCCCAAACTGCTGAGATTACAGATGTGAGCCACCGCACCCTACCTCATTTTCTGTAACAAAGCTAAGCTTGAA CACTGTTGATGTTCTTGAGGGAAGCATATTGGGCTTTAGGCTGTAGGTCAAGTTTATACATCTTAATTATGGTGGAATTCCTATGTAGAG TCTAAAAAGCCAGGTACTTGGTGCTACAGTCAGTCTCCCTGCAGAGGGTTAAGGCGCAGACTACCTGCAGTGAGGAGGTACTGCTTGTAG CATATAGAGCCTCTCCCTAGCTTTGGTTATGGAGGCTTTGAGGTTTTGCAAACCTGACCAATTTAAGCCATAAGATCTGGTCAAAGGGAT ACCCTTCCCACTAAGGACTTGGTTTCTCAGGAAATTATATGTACAGTGCTTGCTGGCAGTTAGATGTCAGGACAATCTAAGCTGAGAAAA CCCCTTCTCTGCCCACCTTAACAGACCTCTAGGGTTCTTAACCCAGCAATCAAGTTTGCCTATCCTAGAGGTGGCGGATTTGATCATTTG GTGTGTTGGGCAATTTTTGTTTTACTGTCTGGTTCCTTCTGCGTGAATTACCACCACCACCACTTGTGCATCTCAGTCTTGTGTGTTGTC TGGTTACGTATTCCCTGGGTGATACCATTCAATGTCTTAATGTACTTGTGGCTCAGACCTGAGTGCAAGGTGGAAATAAACATCAAACAT >In-frame_ENST00000381112_ENST00000468812_TCGA-A7-A26G_CCM2_chr7_45078025_+_PPIA_chr7_44838845_length(amino acids)=231AA_start in transcript=679_stop in transcript=1374 MHSSCRQRRNQNLSKEIPQTEFHTGYSMENEPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKL FADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFI -------------------------------------------------------------- >In-frame_ENST00000474617_ENST00000451562_TCGA-A7-A26G_CCM2_chr7_45078025_+_PPIA_chr7_44838845_length(transcript)=730nt_BP=300nt ATATTTTTCAACAAATTCAGAAGTGAGTAGAGAATGCATAGTAGCTGTCGGCAGAGGAGGAACCAGAATCTCTCCAAAGAAATTCCTCAA ACAGAATTTCACACAGGGTATTCCATGGAGAATGAGCCTGGAATTGTCTCGCCATTTAAACGAGTATTCCTAAAAGGTGAAAAGAGTAGA GATAAGAAAGCCCATGAGAAGGTGACAGAGAGGCGCCCTCTGCACACTGTGGTGTTGTCATTGCCTGAGCGCGTCGAGCCAGACAGACTG CTGAGCGACTATATTGAGAAGGAGGTAAAGCTGTTTGCAGACAAGGTCCCAAAGACAGCAGAAAATTTTCGTGCTCTGAGCACTGGAGAG AAAGGATTTGGTTATAAGGGTTCCTGCTTTCACAGAATTATTCCAGGGTTTATGTGTCAGGGTGGTGACTTCACACGCCATAATGGCACT GGTGGCAAGTCCATCTATGGGGAGAAATTTGAAGATGAGAACTTCATCCTAAAGCATACGGGTCCTGGCATCTTGTCCATGGCAAATGCT GGACCCAACACAAATGGTTCCCAGTTTTTCATCTGCACTGCCAAGACTGAGTGGTAAGGGTACAACATGGCACACTAACCACCTGACTAA ATGAAAAGTTGCCCTGGGGGGAACGGAACAAACACTACTTTTCTTCAACCTTTGCTTCCACAGACTTTTTCATCCCTAAGATACTAGAAG >In-frame_ENST00000474617_ENST00000451562_TCGA-A7-A26G_CCM2_chr7_45078025_+_PPIA_chr7_44838845_length(amino acids)=187AA_start in transcript=33_stop in transcript=596 MHSSCRQRRNQNLSKEIPQTEFHTGYSMENEPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKL FADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFI -------------------------------------------------------------- >In-frame_ENST00000474617_ENST00000468812_TCGA-A7-A26G_CCM2_chr7_45078025_+_PPIA_chr7_44838845_length(transcript)=2424nt_BP=300nt ATATTTTTCAACAAATTCAGAAGTGAGTAGAGAATGCATAGTAGCTGTCGGCAGAGGAGGAACCAGAATCTCTCCAAAGAAATTCCTCAA ACAGAATTTCACACAGGGTATTCCATGGAGAATGAGCCTGGAATTGTCTCGCCATTTAAACGAGTATTCCTAAAAGGTGAAAAGAGTAGA GATAAGAAAGCCCATGAGAAGGTGACAGAGAGGCGCCCTCTGCACACTGTGGTGTTGTCATTGCCTGAGCGCGTCGAGCCAGACAGACTG CTGAGCGACTATATTGAGAAGGAGGTAAAGCTGTTTGCAGACAAGGTCCCAAAGACAGCAGAAAATTTTCGTGCTCTGAGCACTGGAGAG AAAGGATTTGGTTATAAGGGTTCCTGCTTTCACAGAATTATTCCAGGGTTTATGTGTCAGGGTGGTGACTTCACACGCCATAATGGCACT GGTGGCAAGTCCATCTATGGGGAGAAATTTGAAGATGAGAACTTCATCCTAAAGCATACGGGTCCTGGCATCTTGTCCATGGCAAATGCT GGACCCAACACAAATGGTTCCCAGTTTTTCATCTGCACTGCCAAGACTGAGTGGTTGGATGGCAAGCATGTGGTGTTTGGCAAAGTGAAA GAAGGCATGAATATTGTGGAGGCCATGGAGCGCTTTGGGTCCAGGAATGGCAAGACCAGCAAGAAGATCACCATTGCTGACTGTGGACAA CTCGAATAAGTTTGACTTGTGTTTTATCTTAACCACCAGATCATTCCTTCTGTAGCTCAGGAGAGCACCCCTCCACCCCATTTGCTCGCA GTATCCTAGAATCTTTGTGCTCTCGCTGCAGTTCCCTTTGGGTTCCATGTTTTCCTTGTTCCCTCCCATGCCTAGCTGGATTGCAGAGTT AAGTTTATGATTATGAAATAAAAACTAAATAACAATTGTCCTCGTTTGAGTTAAGAGTGTTGATGTAGGCTTTATTTTAAGCAGTAATGG GTTACTTCTGAAACATCACTTGTTTGCTTAATTCTACACAGTACTTAGATTTTTTTTACTTTCCAGTCCCAGGAAGTGTCAATGTTTGTT GAGTGGAATATTGAAAATGTAGGCAGCAACTGGGCATGGTGGCTCACTGTCTGTAATGTATTACCTGAGGCAGAAGACCACCTGAGGGTA GGAGTCAAGATCAGCCTGGGCAACATAGTGAGACGCTGTCTCTACAAAAAATAATTAGCCTGGCCTGGTGGTGCATGCCTAGTCCTAGCT GATCTGGAGGCTGACGTGGGAGGATTGCTTGAGCCTAGAGTGAGCTATTATCATGCCACTGTACAGCCTGGGTGTTCACAGATCTTGTGT CTCAAAGGTAGGCAGAGGCAGGAAAAGCAAGGAGCCAGAATTAAGAGGTTGGGTCAGTCTGCAGTGAGTTCATGCATTTAGAGGTGTTCT TCAAGATGACTAATGTCAAAAATTGAGACATCTGTTGCGGTTTTTTTTTTTTTTTTTTCCCCTGGAATGCAGTGGCGTGATCTCAGCTCA CTGCAGCCTCCGCCTCCTGGGTTCAAGTGATTCTAGTGCCTCAGCCTCCTGAGTAGCTGGGATAATGGGCGTGTGCCACCATGCCCAGCT AATTTTTGTATTTTTAGTATAGATGGGGTTTCATCATTTTGACCAGGCTGGTCTCAAACTCTTGACCTCAGCTGATGCGCCTGCCTTGGC CTCCCAAACTGCTGAGATTACAGATGTGAGCCACCGCACCCTACCTCATTTTCTGTAACAAAGCTAAGCTTGAACACTGTTGATGTTCTT GAGGGAAGCATATTGGGCTTTAGGCTGTAGGTCAAGTTTATACATCTTAATTATGGTGGAATTCCTATGTAGAGTCTAAAAAGCCAGGTA CTTGGTGCTACAGTCAGTCTCCCTGCAGAGGGTTAAGGCGCAGACTACCTGCAGTGAGGAGGTACTGCTTGTAGCATATAGAGCCTCTCC CTAGCTTTGGTTATGGAGGCTTTGAGGTTTTGCAAACCTGACCAATTTAAGCCATAAGATCTGGTCAAAGGGATACCCTTCCCACTAAGG ACTTGGTTTCTCAGGAAATTATATGTACAGTGCTTGCTGGCAGTTAGATGTCAGGACAATCTAAGCTGAGAAAACCCCTTCTCTGCCCAC CTTAACAGACCTCTAGGGTTCTTAACCCAGCAATCAAGTTTGCCTATCCTAGAGGTGGCGGATTTGATCATTTGGTGTGTTGGGCAATTT TTGTTTTACTGTCTGGTTCCTTCTGCGTGAATTACCACCACCACCACTTGTGCATCTCAGTCTTGTGTGTTGTCTGGTTACGTATTCCCT >In-frame_ENST00000474617_ENST00000468812_TCGA-A7-A26G_CCM2_chr7_45078025_+_PPIA_chr7_44838845_length(amino acids)=231AA_start in transcript=33_stop in transcript=728 MHSSCRQRRNQNLSKEIPQTEFHTGYSMENEPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKL FADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFI -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for CCM2-PPIA |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for CCM2-PPIA |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for CCM2-PPIA |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | CCM2 | C1864041 | CEREBRAL CAVERNOUS MALFORMATIONS 2 | 3 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
Hgene | CCM2 | C2919945 | Cavernous Hemangioma of Brain | 2 | CTD_human;GENOMICS_ENGLAND |
Hgene | CCM2 | C0752160 | Hemangioma, Cavernous, Central Nervous System | 1 | CTD_human |
Hgene | CCM2 | C0752161 | Cavernous Hemangioma, Extracerebral | 1 | CTD_human |
Hgene | CCM2 | C0752164 | Cavernous Hemangioma, Intracerebral | 1 | CTD_human |
Hgene | CCM2 | C1140710 | Cerebral Cavernous Hemangioma | 1 | CTD_human |
Hgene | CCM2 | C1956260 | Cavernous Angioma, Central Nervous System | 1 | CTD_human |
Hgene | CCM2 | C4747394 | CAPILLARY MALFORMATION-ARTERIOVENOUS MALFORMATION 1 | 1 | GENOMICS_ENGLAND |
Tgene | PPIA | C0007131 | Non-Small Cell Lung Carcinoma | 1 | CTD_human |
Tgene | PPIA | C0007137 | Squamous cell carcinoma | 1 | CTD_human |
Tgene | PPIA | C0024623 | Malignant neoplasm of stomach | 1 | CTD_human |
Tgene | PPIA | C0026640 | Mouth Neoplasms | 1 | CTD_human |
Tgene | PPIA | C0027627 | Neoplasm Metastasis | 1 | CTD_human |
Tgene | PPIA | C0036341 | Schizophrenia | 1 | PSYGENET |
Tgene | PPIA | C0038356 | Stomach Neoplasms | 1 | CTD_human |
Tgene | PPIA | C0153381 | Malignant neoplasm of mouth | 1 | CTD_human |
Tgene | PPIA | C1708349 | Hereditary Diffuse Gastric Cancer | 1 | CTD_human |