|
Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:CHST11-MAP4 (FusionGDB2 ID:16718) |
Fusion Gene Summary for CHST11-MAP4 |
Fusion gene summary |
Fusion gene information | Fusion gene name: CHST11-MAP4 | Fusion gene ID: 16718 | Hgene | Tgene | Gene symbol | CHST11 | MAP4 | Gene ID | 50515 | 4134 |
Gene name | carbohydrate sulfotransferase 11 | microtubule associated protein 4 | |
Synonyms | C4ST|C4ST-1|C4ST1|HSA269537|OCBMD | - | |
Cytomap | 12q23.3 | 3p21.31 | |
Type of gene | protein-coding | protein-coding | |
Description | carbohydrate sulfotransferase 11C4S-1IgH/CHST11 fusioncarbohydrate (chondroitin 4) sulfotransferase 11chondroitin 4-O-sulfotransferase 1 | microtubule-associated protein 4MAP-4 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | Q9Y4K4 | |
Ensembl transtripts involved in fusion gene | ENST00000547956, ENST00000549260, ENST00000303694, ENST00000546689, ENST00000550711, | ENST00000383737, ENST00000395734, ENST00000426837, ENST00000360240, ENST00000439356, ENST00000264724, ENST00000420772, ENST00000441748, ENST00000462206, ENST00000434267, | |
Fusion gene scores | * DoF score | 13 X 8 X 6=624 | 19 X 21 X 12=4788 |
# samples | 15 | 35 | |
** MAII score | log2(15/624*10)=-2.05658352836637 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(35/4788*10)=-3.77399632511117 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: CHST11 [Title/Abstract] AND MAP4 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | CHST11(104851307)-MAP4(47919013), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | CHST11 | GO:0030206 | chondroitin sulfate biosynthetic process | 11056388 |
Fusion gene breakpoints across CHST11 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across MAP4 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | STAD | TCGA-CD-5800 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
Top |
Fusion Gene ORF analysis for CHST11-MAP4 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000547956 | ENST00000383737 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
In-frame | ENST00000547956 | ENST00000395734 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
In-frame | ENST00000547956 | ENST00000426837 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
In-frame | ENST00000547956 | ENST00000360240 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
5CDS-intron | ENST00000547956 | ENST00000439356 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
5CDS-intron | ENST00000547956 | ENST00000264724 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
5CDS-intron | ENST00000547956 | ENST00000420772 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
5CDS-5UTR | ENST00000547956 | ENST00000441748 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
5CDS-5UTR | ENST00000547956 | ENST00000462206 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
5CDS-intron | ENST00000547956 | ENST00000434267 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-3CDS | ENST00000549260 | ENST00000383737 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-3CDS | ENST00000549260 | ENST00000395734 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-3CDS | ENST00000549260 | ENST00000426837 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-3CDS | ENST00000549260 | ENST00000360240 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-intron | ENST00000549260 | ENST00000439356 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-intron | ENST00000549260 | ENST00000264724 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-intron | ENST00000549260 | ENST00000420772 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-5UTR | ENST00000549260 | ENST00000441748 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-5UTR | ENST00000549260 | ENST00000462206 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-intron | ENST00000549260 | ENST00000434267 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
In-frame | ENST00000303694 | ENST00000383737 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
In-frame | ENST00000303694 | ENST00000395734 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
In-frame | ENST00000303694 | ENST00000426837 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
In-frame | ENST00000303694 | ENST00000360240 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
5CDS-intron | ENST00000303694 | ENST00000439356 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
5CDS-intron | ENST00000303694 | ENST00000264724 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
5CDS-intron | ENST00000303694 | ENST00000420772 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
5CDS-5UTR | ENST00000303694 | ENST00000441748 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
5CDS-5UTR | ENST00000303694 | ENST00000462206 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
5CDS-intron | ENST00000303694 | ENST00000434267 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-3CDS | ENST00000546689 | ENST00000383737 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-3CDS | ENST00000546689 | ENST00000395734 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-3CDS | ENST00000546689 | ENST00000426837 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-3CDS | ENST00000546689 | ENST00000360240 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-intron | ENST00000546689 | ENST00000439356 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-intron | ENST00000546689 | ENST00000264724 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-intron | ENST00000546689 | ENST00000420772 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-5UTR | ENST00000546689 | ENST00000441748 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-5UTR | ENST00000546689 | ENST00000462206 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-intron | ENST00000546689 | ENST00000434267 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-3CDS | ENST00000550711 | ENST00000383737 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-3CDS | ENST00000550711 | ENST00000395734 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-3CDS | ENST00000550711 | ENST00000426837 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-3CDS | ENST00000550711 | ENST00000360240 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-intron | ENST00000550711 | ENST00000439356 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-intron | ENST00000550711 | ENST00000264724 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-intron | ENST00000550711 | ENST00000420772 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-5UTR | ENST00000550711 | ENST00000441748 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-5UTR | ENST00000550711 | ENST00000462206 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
intron-intron | ENST00000550711 | ENST00000434267 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000547956 | CHST11 | chr12 | 104851307 | + | ENST00000383737 | MAP4 | chr3 | 47919013 | - | 4155 | 562 | 15 | 1814 | 599 |
ENST00000547956 | CHST11 | chr12 | 104851307 | + | ENST00000395734 | MAP4 | chr3 | 47919013 | - | 4067 | 562 | 15 | 1970 | 651 |
ENST00000547956 | CHST11 | chr12 | 104851307 | + | ENST00000426837 | MAP4 | chr3 | 47919013 | - | 3960 | 562 | 15 | 2021 | 668 |
ENST00000547956 | CHST11 | chr12 | 104851307 | + | ENST00000360240 | MAP4 | chr3 | 47919013 | - | 3186 | 562 | 15 | 2021 | 668 |
ENST00000303694 | CHST11 | chr12 | 104851307 | + | ENST00000383737 | MAP4 | chr3 | 47919013 | - | 4150 | 557 | 10 | 1809 | 599 |
ENST00000303694 | CHST11 | chr12 | 104851307 | + | ENST00000395734 | MAP4 | chr3 | 47919013 | - | 4062 | 557 | 10 | 1965 | 651 |
ENST00000303694 | CHST11 | chr12 | 104851307 | + | ENST00000426837 | MAP4 | chr3 | 47919013 | - | 3955 | 557 | 10 | 2016 | 668 |
ENST00000303694 | CHST11 | chr12 | 104851307 | + | ENST00000360240 | MAP4 | chr3 | 47919013 | - | 3181 | 557 | 10 | 2016 | 668 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000547956 | ENST00000383737 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - | 0.005249511 | 0.99475056 |
ENST00000547956 | ENST00000395734 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - | 0.003802063 | 0.9961979 |
ENST00000547956 | ENST00000426837 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - | 0.004699458 | 0.99530053 |
ENST00000547956 | ENST00000360240 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - | 0.004654337 | 0.99534565 |
ENST00000303694 | ENST00000383737 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - | 0.005282657 | 0.9947174 |
ENST00000303694 | ENST00000395734 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - | 0.003824487 | 0.9961755 |
ENST00000303694 | ENST00000426837 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - | 0.004727914 | 0.9952721 |
ENST00000303694 | ENST00000360240 | CHST11 | chr12 | 104851307 | + | MAP4 | chr3 | 47919013 | - | 0.004705051 | 0.995295 |
Top |
Fusion Genomic Features for CHST11-MAP4 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
Top |
Fusion Protein Features for CHST11-MAP4 |
Go to FGviewer for the breakpoints of chr12:104851307-chr3:47919013 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | MAP4 |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: May play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminal pathway. {ECO:0000269|PubMed:9038372}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | CHST11 | chr12:104851307 | chr3:47919013 | ENST00000303694 | + | 1 | 3 | 1_16 | 39.333333333333336 | 353.0 | Topological domain | Cytoplasmic |
Hgene | CHST11 | chr12:104851307 | chr3:47919013 | ENST00000303694 | + | 1 | 3 | 17_37 | 39.333333333333336 | 353.0 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000434267 | 0 | 4 | 248_545 | 0 | 100.0 | Region | Note=17 X 14 AA tandem repeats | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000439356 | 0 | 4 | 248_545 | 0 | 100.0 | Region | Note=17 X 14 AA tandem repeats | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000360240 | 7 | 19 | 1023_1053 | 666.3333333333334 | 1153.0 | Repeat | Note=Tau/MAP 3 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000360240 | 7 | 19 | 1054_1085 | 666.3333333333334 | 1153.0 | Repeat | Note=Tau/MAP 4 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000360240 | 7 | 19 | 923_953 | 666.3333333333334 | 1153.0 | Repeat | Note=Tau/MAP 1 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000360240 | 7 | 19 | 992_1022 | 666.3333333333334 | 1153.0 | Repeat | Note=Tau/MAP 2 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000395734 | 7 | 18 | 1023_1053 | 666.3333333333334 | 1136.0 | Repeat | Note=Tau/MAP 3 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000395734 | 7 | 18 | 1054_1085 | 666.3333333333334 | 1136.0 | Repeat | Note=Tau/MAP 4 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000395734 | 7 | 18 | 923_953 | 666.3333333333334 | 1136.0 | Repeat | Note=Tau/MAP 1 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000395734 | 7 | 18 | 992_1022 | 666.3333333333334 | 1136.0 | Repeat | Note=Tau/MAP 2 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000434267 | 0 | 4 | 1023_1053 | 0 | 100.0 | Repeat | Note=Tau/MAP 3 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000434267 | 0 | 4 | 1054_1085 | 0 | 100.0 | Repeat | Note=Tau/MAP 4 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000434267 | 0 | 4 | 248_261 | 0 | 100.0 | Repeat | Note=1 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000434267 | 0 | 4 | 262_275 | 0 | 100.0 | Repeat | Note=2 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000434267 | 0 | 4 | 276_289 | 0 | 100.0 | Repeat | Note=3 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000434267 | 0 | 4 | 290_303 | 0 | 100.0 | Repeat | Note=4 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000434267 | 0 | 4 | 304_317 | 0 | 100.0 | Repeat | Note=5 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000434267 | 0 | 4 | 318_331 | 0 | 100.0 | Repeat | Note=6 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000434267 | 0 | 4 | 332_345 | 0 | 100.0 | Repeat | Note=7 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000434267 | 0 | 4 | 346_351 | 0 | 100.0 | Repeat | Note=8%3B truncated | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000434267 | 0 | 4 | 352_377 | 0 | 100.0 | Repeat | Note=26 residues 1 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000434267 | 0 | 4 | 378_403 | 0 | 100.0 | Repeat | Note=26 residues 2 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000434267 | 0 | 4 | 408_421 | 0 | 100.0 | Repeat | Note=9 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000434267 | 0 | 4 | 422_433 | 0 | 100.0 | Repeat | Note=10 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000434267 | 0 | 4 | 434_447 | 0 | 100.0 | Repeat | Note=11 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000434267 | 0 | 4 | 448_461 | 0 | 100.0 | Repeat | Note=12 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000434267 | 0 | 4 | 462_475 | 0 | 100.0 | Repeat | Note=13 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000434267 | 0 | 4 | 476_489 | 0 | 100.0 | Repeat | Note=14 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000434267 | 0 | 4 | 490_503 | 0 | 100.0 | Repeat | Note=15 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000434267 | 0 | 4 | 504_517 | 0 | 100.0 | Repeat | Note=16 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000434267 | 0 | 4 | 532_545 | 0 | 100.0 | Repeat | Note=17 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000434267 | 0 | 4 | 923_953 | 0 | 100.0 | Repeat | Note=Tau/MAP 1 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000434267 | 0 | 4 | 992_1022 | 0 | 100.0 | Repeat | Note=Tau/MAP 2 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000439356 | 0 | 4 | 1023_1053 | 0 | 100.0 | Repeat | Note=Tau/MAP 3 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000439356 | 0 | 4 | 1054_1085 | 0 | 100.0 | Repeat | Note=Tau/MAP 4 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000439356 | 0 | 4 | 248_261 | 0 | 100.0 | Repeat | Note=1 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000439356 | 0 | 4 | 262_275 | 0 | 100.0 | Repeat | Note=2 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000439356 | 0 | 4 | 276_289 | 0 | 100.0 | Repeat | Note=3 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000439356 | 0 | 4 | 290_303 | 0 | 100.0 | Repeat | Note=4 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000439356 | 0 | 4 | 304_317 | 0 | 100.0 | Repeat | Note=5 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000439356 | 0 | 4 | 318_331 | 0 | 100.0 | Repeat | Note=6 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000439356 | 0 | 4 | 332_345 | 0 | 100.0 | Repeat | Note=7 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000439356 | 0 | 4 | 346_351 | 0 | 100.0 | Repeat | Note=8%3B truncated | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000439356 | 0 | 4 | 352_377 | 0 | 100.0 | Repeat | Note=26 residues 1 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000439356 | 0 | 4 | 378_403 | 0 | 100.0 | Repeat | Note=26 residues 2 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000439356 | 0 | 4 | 408_421 | 0 | 100.0 | Repeat | Note=9 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000439356 | 0 | 4 | 422_433 | 0 | 100.0 | Repeat | Note=10 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000439356 | 0 | 4 | 434_447 | 0 | 100.0 | Repeat | Note=11 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000439356 | 0 | 4 | 448_461 | 0 | 100.0 | Repeat | Note=12 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000439356 | 0 | 4 | 462_475 | 0 | 100.0 | Repeat | Note=13 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000439356 | 0 | 4 | 476_489 | 0 | 100.0 | Repeat | Note=14 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000439356 | 0 | 4 | 490_503 | 0 | 100.0 | Repeat | Note=15 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000439356 | 0 | 4 | 504_517 | 0 | 100.0 | Repeat | Note=16 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000439356 | 0 | 4 | 532_545 | 0 | 100.0 | Repeat | Note=17 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000439356 | 0 | 4 | 923_953 | 0 | 100.0 | Repeat | Note=Tau/MAP 1 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000439356 | 0 | 4 | 992_1022 | 0 | 100.0 | Repeat | Note=Tau/MAP 2 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | CHST11 | chr12:104851307 | chr3:47919013 | ENST00000303694 | + | 1 | 3 | 124_130 | 39.333333333333336 | 353.0 | Nucleotide binding | PAPS |
Hgene | CHST11 | chr12:104851307 | chr3:47919013 | ENST00000303694 | + | 1 | 3 | 186_194 | 39.333333333333336 | 353.0 | Nucleotide binding | PAPS |
Hgene | CHST11 | chr12:104851307 | chr3:47919013 | ENST00000549260 | + | 1 | 3 | 124_130 | 0 | 348.0 | Nucleotide binding | PAPS |
Hgene | CHST11 | chr12:104851307 | chr3:47919013 | ENST00000549260 | + | 1 | 3 | 186_194 | 0 | 348.0 | Nucleotide binding | PAPS |
Hgene | CHST11 | chr12:104851307 | chr3:47919013 | ENST00000303694 | + | 1 | 3 | 38_352 | 39.333333333333336 | 353.0 | Topological domain | Lumenal |
Hgene | CHST11 | chr12:104851307 | chr3:47919013 | ENST00000549260 | + | 1 | 3 | 1_16 | 0 | 348.0 | Topological domain | Cytoplasmic |
Hgene | CHST11 | chr12:104851307 | chr3:47919013 | ENST00000549260 | + | 1 | 3 | 38_352 | 0 | 348.0 | Topological domain | Lumenal |
Hgene | CHST11 | chr12:104851307 | chr3:47919013 | ENST00000549260 | + | 1 | 3 | 17_37 | 0 | 348.0 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000360240 | 7 | 19 | 248_545 | 666.3333333333334 | 1153.0 | Region | Note=17 X 14 AA tandem repeats | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000395734 | 7 | 18 | 248_545 | 666.3333333333334 | 1136.0 | Region | Note=17 X 14 AA tandem repeats | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000360240 | 7 | 19 | 248_261 | 666.3333333333334 | 1153.0 | Repeat | Note=1 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000360240 | 7 | 19 | 262_275 | 666.3333333333334 | 1153.0 | Repeat | Note=2 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000360240 | 7 | 19 | 276_289 | 666.3333333333334 | 1153.0 | Repeat | Note=3 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000360240 | 7 | 19 | 290_303 | 666.3333333333334 | 1153.0 | Repeat | Note=4 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000360240 | 7 | 19 | 304_317 | 666.3333333333334 | 1153.0 | Repeat | Note=5 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000360240 | 7 | 19 | 318_331 | 666.3333333333334 | 1153.0 | Repeat | Note=6 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000360240 | 7 | 19 | 332_345 | 666.3333333333334 | 1153.0 | Repeat | Note=7 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000360240 | 7 | 19 | 346_351 | 666.3333333333334 | 1153.0 | Repeat | Note=8%3B truncated | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000360240 | 7 | 19 | 352_377 | 666.3333333333334 | 1153.0 | Repeat | Note=26 residues 1 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000360240 | 7 | 19 | 378_403 | 666.3333333333334 | 1153.0 | Repeat | Note=26 residues 2 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000360240 | 7 | 19 | 408_421 | 666.3333333333334 | 1153.0 | Repeat | Note=9 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000360240 | 7 | 19 | 422_433 | 666.3333333333334 | 1153.0 | Repeat | Note=10 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000360240 | 7 | 19 | 434_447 | 666.3333333333334 | 1153.0 | Repeat | Note=11 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000360240 | 7 | 19 | 448_461 | 666.3333333333334 | 1153.0 | Repeat | Note=12 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000360240 | 7 | 19 | 462_475 | 666.3333333333334 | 1153.0 | Repeat | Note=13 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000360240 | 7 | 19 | 476_489 | 666.3333333333334 | 1153.0 | Repeat | Note=14 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000360240 | 7 | 19 | 490_503 | 666.3333333333334 | 1153.0 | Repeat | Note=15 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000360240 | 7 | 19 | 504_517 | 666.3333333333334 | 1153.0 | Repeat | Note=16 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000360240 | 7 | 19 | 532_545 | 666.3333333333334 | 1153.0 | Repeat | Note=17 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000395734 | 7 | 18 | 248_261 | 666.3333333333334 | 1136.0 | Repeat | Note=1 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000395734 | 7 | 18 | 262_275 | 666.3333333333334 | 1136.0 | Repeat | Note=2 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000395734 | 7 | 18 | 276_289 | 666.3333333333334 | 1136.0 | Repeat | Note=3 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000395734 | 7 | 18 | 290_303 | 666.3333333333334 | 1136.0 | Repeat | Note=4 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000395734 | 7 | 18 | 304_317 | 666.3333333333334 | 1136.0 | Repeat | Note=5 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000395734 | 7 | 18 | 318_331 | 666.3333333333334 | 1136.0 | Repeat | Note=6 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000395734 | 7 | 18 | 332_345 | 666.3333333333334 | 1136.0 | Repeat | Note=7 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000395734 | 7 | 18 | 346_351 | 666.3333333333334 | 1136.0 | Repeat | Note=8%3B truncated | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000395734 | 7 | 18 | 352_377 | 666.3333333333334 | 1136.0 | Repeat | Note=26 residues 1 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000395734 | 7 | 18 | 378_403 | 666.3333333333334 | 1136.0 | Repeat | Note=26 residues 2 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000395734 | 7 | 18 | 408_421 | 666.3333333333334 | 1136.0 | Repeat | Note=9 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000395734 | 7 | 18 | 422_433 | 666.3333333333334 | 1136.0 | Repeat | Note=10 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000395734 | 7 | 18 | 434_447 | 666.3333333333334 | 1136.0 | Repeat | Note=11 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000395734 | 7 | 18 | 448_461 | 666.3333333333334 | 1136.0 | Repeat | Note=12 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000395734 | 7 | 18 | 462_475 | 666.3333333333334 | 1136.0 | Repeat | Note=13 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000395734 | 7 | 18 | 476_489 | 666.3333333333334 | 1136.0 | Repeat | Note=14 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000395734 | 7 | 18 | 490_503 | 666.3333333333334 | 1136.0 | Repeat | Note=15 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000395734 | 7 | 18 | 504_517 | 666.3333333333334 | 1136.0 | Repeat | Note=16 | |
Tgene | MAP4 | chr12:104851307 | chr3:47919013 | ENST00000395734 | 7 | 18 | 532_545 | 666.3333333333334 | 1136.0 | Repeat | Note=17 |
Top |
Fusion Gene Sequence for CHST11-MAP4 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000547956_ENST00000383737_TCGA-CD-5800_CHST11_chr12_104851307_+_MAP4_chr3_47919013_length(transcript)=4155nt_BP=562nt GGAATATATAGATCGTTGGAGCGCAATGAAGTAGCCTTTGGAGAGAAGGGAGAGGGCCCGTCGGACAGCCACAGCGGCCAGCGCAGCGGC AGCGGCGGCGGCACCACCATCACCGCTCGCACCCCAGCCGCCCGGCCCGCGACCAGGCAGCGGCGGCCGCCGGCGGGATCGGAGGAGGCG GCGGAGCGGCGAGGAGGAGGAGCAGGAGCGCGCAGCCAGCGGGTCCACGCATCTCAGCACTTCCAGACCAACTCCGGCACCTTCCACACC CCTGCCCGGGCTGGGGGCTCCGAGAGCGGCCGCGAAGCGACTCCGATCCTCCCTCTGAGCCTTGCTCAGCTCTGCCCCGCGCCTCCCGGG CTCCGGTCCGCGCGGCGGGGTCCCTGCTCCTGCGCCCCGGGCGCGCTTCCCGGACACCCCGGTCCCCGCAGCCAGGACAAAGCCATGAAG CCAGCGCTGCTGGAAGTGATGAGGATGAACAGAATCTGCCGGATGGTGCTGGCCACTTGCTTGGGATCCTTTATCCTGGTCATCTTCTAT TTCCAAAGTATGTTGCACCCAGGAATAGCCAGGCCAGAAGAAGGAAGGCCTGTGGTGAGTGGGACAGGAAATGACATCACCACCCCACCG AACAAGGAGCTCCCACCAAGCCCAGAGAAGAAAACAAAGCCTTTGGCCACCACTCAACCTGCAAAGACTTCAACATCGAAAGCCAAAACA CAGCCCACTTCTCTCCCTAAGCAGCCAGCTCCCACCACCATTGGTGGGTTGAATAAAAAACCCATGAGCCTTGCTTCAGGCTTAGTGCCA GCTGCCCCACCCAAACGCCCTGCCGTCGCCTCTGCCAGGCCTTCCATCTTACCTTCAAAAGACGTGAAGCCAAAGCCCATTGCAGATGCA AAGGCTCCTGAGAAGCGGGCCTCACCATCCAAGCCAGCTTCTGCCCCAGCCTCCAGATCTGGGTCCAAGAGCACTCAGACTGTTGCAAAA ACCACAACAGCTGCTGCTGTTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCTCCACGCTCCTGCCCAAGAAGCCCACTGCCATTAAGACT GAGGGAAAACCTGCAGAAGTCAAGAAGATGACTGCAAAGTCTGTACCAGCTGACTTGAGTCGCCCAAAGAGCACCTCCACCAGTTCCATG AAGAAAACCACCACTCTCAGTGGGACAGCCCCCGCTGCAGGGGTGGTTCCCAGCCGAGTCAAGGCCACACCCATGCCCTCCCGGCCCTCC ACAACTCCTTTCATAGACAAGAAGCCCACCTCGGCCAAACCCAGCTCCACCACCCCCCGGCTCAGCCGCCTGGCCACCAATACTTCTGCT CCTGATCTGAAGAATGTCCGCTCCAAGGTTGGCTCCACGGAAAACATCAAGCATCAGCCTGGAGGAGGCCGGGTTCAGATTCAGAACAAG AAAGTGGACATCTCTAAGGTCTCCTCCAAGTGTGGGTCTAAGGCTAACATCAAGCACAAGCCTGGTGGAGGAGATGTCAAGATTGAAAGT CAGAAGTTGAACTTCAAGGAGAAGGCCCAGGCCAAGGTGGGATCCCTCGATAATGTGGGCCACCTACCTGCAGGAGGTGCTGTGAAGACT GAGGGCGGTGGCAGCGAGGCTCCTCTGTGTCCGGGTCCCCCTGCTGGGGAGGAGCCGGCCATCTCTGAGGCAGCGCCTGAAGCTGGCGCC CCCACTTCAGCCAGTGGCCTCAATGGCCACCCCACCCTGTCAGGGGGTGGTGACCAAAGGGAGGCCCAGACCTTGGACAGCCAGATCCAG GAGACAAGCATCTAATGATGACATTCTGGTCTCGTCTTCCGTCTCCCCCGTGTTCCCCTCTTGTCTCCCCTGTTCCCCTCTCCCTTCCCT CCTCCCATGTCACTGCAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCACGGGGCCGACATTGTCTCC CGCCCCCCACACTTCCCTGGCGGCCCCAACTCGGGCTCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTG GGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCCACACCTCCTCTCAC TCCCCAGCCTGGGCCCATCTCCCTGCTTTGGTCTTGCCCCATCACTGCGCCACTGCTCCGTGGAGGAGGTTGGGAGGGGGTTGGGGTGGT TGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTTTTGGTTCTTTGGTCCAAACCCAAAAGAAACTGACAT GCCCTCCCTTCTCCCTGGATCTACCTGGAGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACT GCCTCTCCCTCTGGTCCCACAAATGGGCGCCCCCCCCTCCCCATGCAGGTGGTGTCGGGCCCTTCTTGCTGCCCTGCCCCAAGTTGGGGG TCAGTGCTGCCTGTCCCCATGCTTAACATACCCGCCTAGCTGCTGTCACATTTTTCTTGTTTTGTCCTTTTATTTTTTTCTAATAACCTA AAAACTGGCAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAGGGCGGAGATATCCTTA TGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTGGAGGCGGTGCGGCAGGGAAGAGGGGTGCAGAGGCTGTGGCTGGTGAGCCG GTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCCATTTTGTTGTGTGTATGCTGCTTTTCTTTTCTAACCAAGAGGC TGGTTTTGGCATCTCTGTCCCATTCCCTGGGATCTGGTGGTCAGCCCTAGGATAAAAAGCCAGGGCTGGAGAACAAGAAAGGGCCAGGAG ATGGAATTCCTTCAGGCCGGCACCCACACCCTAGGACATGTAAGCCCTCATGTCCAAGGGAGCCTCATGCAGATAGTAGGAAATCAGGTC TGGAAATTTAAAAATAAAAGGCATGAGACTAAGGCTATCTGCTTCCCTTATGCCCTGACTGGAGAGGGGAGGGAGGAGAGGCAAGGCCCA CAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGAACTGTATTGACACAAAGATTCTTATTGCACTTGTA TTTTTTGTATTAAAGTTTGCATGGTTTCTAATAAAGGATTCAAACATAAGTTTGTAGTGAAATGGCCTGGGAGATTCCAAGGGCTTCTCT GGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCCCCAGACTTGGCCTCCTCATGCCCCCTCCTGACCTCTGCCCTTCT CTGGTCCTGGCATCCCTGGAGAAGGTAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTGTCCTGGGCCTGACAG GTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGCAGGGGC TCACGGAGGAAGTGCTGCCTGGGCCAGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGAG GGAGCCAGTGTTTTGTCAGCAGGAAGAAAGGGCCTGCTGGGATGAAAGTGGGAAGGAAACAGGGTTGCGTAGTCAGGAGACACCTCAGGG GCAACAGCACAGGCCCAGAGTACCTGCTGCCTCCACTGCGTCTGTCCTGGGGTCATGAGGATGCTGAGGTTGACGACAGGTTCCAGGTCC TTTCACTCCTTTGGCCAAAGGTTGGGGGTAGGTGGCCCAAGTGGCGTGCTCTCTAGGTAGACAACAGGAGTGGTCAGAGTTCCCTCAAAG GATCCTCCACTCCAGAGCACCTGAGAAGGCCGGGACCAGAGGCCCTGTGTGATGTGTACTCCGCAGCTGTTTGGGGTGGGACATTTCTGT ACTTCTCGATTTGCTTATGGCTCAGCCATTACCTGTGTCAGTCCATGATTCTGTTGTAACAGTTTTAAGAGTAAATAAATAAAGCTGCCT >In-frame_ENST00000547956_ENST00000383737_TCGA-CD-5800_CHST11_chr12_104851307_+_MAP4_chr3_47919013_length(amino acids)=599AA_start in transcript=15_stop in transcript=1814 MERNEVAFGEKGEGPSDSHSGQRSGSGGGTTITARTPAARPATRQRRPPAGSEEAAERRGGGAGARSQRVHASQHFQTNSGTFHTPARAG GSESGREATPILPLSLAQLCPAPPGLRSARRGPCSCAPGALPGHPGPRSQDKAMKPALLEVMRMNRICRMVLATCLGSFILVIFYFQSML HPGIARPEEGRPVVSGTGNDITTPPNKELPPSPEKKTKPLATTQPAKTSTSKAKTQPTSLPKQPAPTTIGGLNKKPMSLASGLVPAAPPK RPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEGKPA EVKKMTAKSVPADLSRPKSTSTSSMKKTTTLSGTAPAAGVVPSRVKATPMPSRPSTTPFIDKKPTSAKPSSTTPRLSRLATNTSAPDLKN VRSKVGSTENIKHQPGGGRVQIQNKKVDISKVSSKCGSKANIKHKPGGGDVKIESQKLNFKEKAQAKVGSLDNVGHLPAGGAVKTEGGGS -------------------------------------------------------------- >In-frame_ENST00000547956_ENST00000395734_TCGA-CD-5800_CHST11_chr12_104851307_+_MAP4_chr3_47919013_length(transcript)=4067nt_BP=562nt GGAATATATAGATCGTTGGAGCGCAATGAAGTAGCCTTTGGAGAGAAGGGAGAGGGCCCGTCGGACAGCCACAGCGGCCAGCGCAGCGGC AGCGGCGGCGGCACCACCATCACCGCTCGCACCCCAGCCGCCCGGCCCGCGACCAGGCAGCGGCGGCCGCCGGCGGGATCGGAGGAGGCG GCGGAGCGGCGAGGAGGAGGAGCAGGAGCGCGCAGCCAGCGGGTCCACGCATCTCAGCACTTCCAGACCAACTCCGGCACCTTCCACACC CCTGCCCGGGCTGGGGGCTCCGAGAGCGGCCGCGAAGCGACTCCGATCCTCCCTCTGAGCCTTGCTCAGCTCTGCCCCGCGCCTCCCGGG CTCCGGTCCGCGCGGCGGGGTCCCTGCTCCTGCGCCCCGGGCGCGCTTCCCGGACACCCCGGTCCCCGCAGCCAGGACAAAGCCATGAAG CCAGCGCTGCTGGAAGTGATGAGGATGAACAGAATCTGCCGGATGGTGCTGGCCACTTGCTTGGGATCCTTTATCCTGGTCATCTTCTAT TTCCAAAGTATGTTGCACCCAGGAATAGCCAGGCCAGAAGAAGGAAGGCCTGTGGTGAGTGGGACAGGAAATGACATCACCACCCCACCG AACAAGGAGCTCCCACCAAGCCCAGAGAAGAAAACAAAGCCTTTGGCCACCACTCAACCTGCAAAGACTTCAACATCGAAAGCCAAAACA CAGCCCACTTCTCTCCCTAAGCAGCCAGCTCCCACCACCATTGGTGGGTTGAATAAAAAACCCATGAGCCTTGCTTCAGGCTTAGTGCCA GCTGCCCCACCCAAACGCCCTGCCGTCGCCTCTGCCAGGCCTTCCATCTTACCTTCAAAAGACGTGAAGCCAAAGCCCATTGCAGATGCA AAGGCTCCTGAGAAGCGGGCCTCACCATCCAAGCCAGCTTCTGCCCCAGCCTCCAGATCTGGGTCCAAGAGCACTCAGACTGTTGCAAAA ACCACAACAGCTGCTGCTGTTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCTCCACGCTCCTGCCCAAGAAGCCCACTGCCATTAAGACT GAGGGAAAACCTGCAGAAGTCAAGAAGATGACTGCAAAGTCTGTACCAGCTGACTTGAGTCGCCCAAAGAGCACCTCCACCAGTTCCATG AAGAAAACCACCACTCTCAGTGGGACAGCCCCCGCTGCAGGGGTGGTTCCCAGCCGAGTCAAGGCCACACCCATGCCCTCCCGGCCCTCC ACAACTCCTTTCATAGACAAGAAGCCCACCTCGGCCAAACCCAGCTCCACCACCCCCCGGCTCAGCCGCCTGGCCACCAATACTTCTGCT CCTGATCTGAAGAATGTCCGCTCCAAGGTTGGCTCCACGGAAAACATCAAGCATCAGCCTGGAGGAGGCCGGGCCAAAGTAGAGAAAAAA ACAGAGGCAGCTGCTACAACCCGAAAGCCTGAATCTAATGCAGTCACTAAAACAGCCGGCCCAATTGCAAGTGCACAGAAACAACCTGCG GGGAAAGTCCAGATAGTCTCCAAAAAAGTGAGCTACAGCCATATTCAGTCCAAGTGTGGTTCCAAGGACAATATTAAGCATGTCCCTGGA GGTGGTAATGTTCAGATTCAGAACAAGAAAGTGGACATCTCTAAGGTCTCCTCCAAGTGTGGGTCTAAGGCTAACATCAAGCACAAGCCT GGTGGAGGAGATGTCAAGATTGAAAGTCAGAAGTTGAACTTCAAGGAGAAGGCCCAGGCCAAGGTGGGATCCCTCGATAATGTGGGCCAC CTACCTGCAGGAGGTGCTGTGAAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCACGGGGCCGACATT GTCTCCCGCCCCCCACACTTCCCTGGCGGCCCCAACTCGGGCTCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAG CGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCCACACCTCC TCTCACTCCCCAGCCTGGGCCCATCTCCCTGCTTTGGTCTTGCCCCATCACTGCGCCACTGCTCCGTGGAGGAGGTTGGGAGGGGGTTGG GGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTTTTGGTTCTTTGGTCCAAACCCAAAAGAAAC TGACATGCCCTCCCTTCTCCCTGGATCTACCTGGAGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAA GCCACTGCCTCTCCCTCTGGTCCCACAAATGGGCGCCCCCCCCTCCCCATGCAGGTGGTGTCGGGCCCTTCTTGCTGCCCTGCCCCAAGT TGGGGGTCAGTGCTGCCTGTCCCCATGCTTAACATACCCGCCTAGCTGCTGTCACATTTTTCTTGTTTTGTCCTTTTATTTTTTTCTAAT AACCTAAAAACTGGCAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAGGGCGGAGATA TCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTGGAGGCGGTGCGGCAGGGAAGAGGGGTGCAGAGGCTGTGGCTGGT GAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCCATTTTGTTGTGTGTATGCTGCTTTTCTTTTCTAACCA AGAGGCTGGTTTTGGCATCTCTGTCCCATTCCCTGGGATCTGGTGGTCAGCCCTAGGATAAAAAGCCAGGGCTGGAGAACAAGAAAGGGC CAGGAGATGGAATTCCTTCAGGCCGGCACCCACACCCTAGGACATGTAAGCCCTCATGTCCAAGGGAGCCTCATGCAGATAGTAGGAAAT CAGGTCTGGAAATTTAAAAATAAAAGGCATGAGACTAAGGCTATCTGCTTCCCTTATGCCCTGACTGGAGAGGGGAGGGAGGAGAGGCAA GGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGAACTGTATTGACACAAAGATTCTTATTGCA CTTGTATTTTTTGTATTAAAGTTTGCATGGTTTCTAATAAAGGATTCAAACATAAGTTTGTAGTGAAATGGCCTGGGAGATTCCAAGGGC TTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCCCCAGACTTGGCCTCCTCATGCCCCCTCCTGACCTCTGC CCTTCTCTGGTCCTGGCATCCCTGGAGAAGGTAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTGTCCTGGGCC TGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGC AGGGGCTCACGGAGGAAGTGCTGCCTGGGCCAGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAA CATGAGGGAGCCAGTGTTTTGTCAGCAGGAAGAAAGGGCCTGCTGGGATGAAAGTGGGAAGGAAACAGGGTTGCGTAGTCAGGAGACACC TCAGGGGCAACAGCACAGGCCCAGAGTACCTGCTGCCTCCACTGCGTCTGTCCTGGGGTCATGAGGATGCTGAGGTTGACGACAGGTTCC AGGTCCTTTCACTCCTTTGGCCAAAGGTTGGGGGTAGGTGGCCCAAGTGGCGTGCTCTCTAGGTAGACAACAGGAGTGGTCAGAGTTCCC TCAAAGGATCCTCCACTCCAGAGCACCTGAGAAGGCCGGGACCAGAGGCCCTGTGTGATGTGTACTCCGCAGCTGTTTGGGGTGGGACAT TTCTGTACTTCTCGATTTGCTTATGGCTCAGCCATTACCTGTGTCAGTCCATGATTCTGTTGTAACAGTTTTAAGAGTAAATAAATAAAG >In-frame_ENST00000547956_ENST00000395734_TCGA-CD-5800_CHST11_chr12_104851307_+_MAP4_chr3_47919013_length(amino acids)=651AA_start in transcript=15_stop in transcript=1970 MERNEVAFGEKGEGPSDSHSGQRSGSGGGTTITARTPAARPATRQRRPPAGSEEAAERRGGGAGARSQRVHASQHFQTNSGTFHTPARAG GSESGREATPILPLSLAQLCPAPPGLRSARRGPCSCAPGALPGHPGPRSQDKAMKPALLEVMRMNRICRMVLATCLGSFILVIFYFQSML HPGIARPEEGRPVVSGTGNDITTPPNKELPPSPEKKTKPLATTQPAKTSTSKAKTQPTSLPKQPAPTTIGGLNKKPMSLASGLVPAAPPK RPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEGKPA EVKKMTAKSVPADLSRPKSTSTSSMKKTTTLSGTAPAAGVVPSRVKATPMPSRPSTTPFIDKKPTSAKPSSTTPRLSRLATNTSAPDLKN VRSKVGSTENIKHQPGGGRAKVEKKTEAAATTRKPESNAVTKTAGPIASAQKQPAGKVQIVSKKVSYSHIQSKCGSKDNIKHVPGGGNVQ IQNKKVDISKVSSKCGSKANIKHKPGGGDVKIESQKLNFKEKAQAKVGSLDNVGHLPAGGAVKIETYRLTFRANARARTDHGADIVSRPP -------------------------------------------------------------- >In-frame_ENST00000547956_ENST00000426837_TCGA-CD-5800_CHST11_chr12_104851307_+_MAP4_chr3_47919013_length(transcript)=3960nt_BP=562nt GGAATATATAGATCGTTGGAGCGCAATGAAGTAGCCTTTGGAGAGAAGGGAGAGGGCCCGTCGGACAGCCACAGCGGCCAGCGCAGCGGC AGCGGCGGCGGCACCACCATCACCGCTCGCACCCCAGCCGCCCGGCCCGCGACCAGGCAGCGGCGGCCGCCGGCGGGATCGGAGGAGGCG GCGGAGCGGCGAGGAGGAGGAGCAGGAGCGCGCAGCCAGCGGGTCCACGCATCTCAGCACTTCCAGACCAACTCCGGCACCTTCCACACC CCTGCCCGGGCTGGGGGCTCCGAGAGCGGCCGCGAAGCGACTCCGATCCTCCCTCTGAGCCTTGCTCAGCTCTGCCCCGCGCCTCCCGGG CTCCGGTCCGCGCGGCGGGGTCCCTGCTCCTGCGCCCCGGGCGCGCTTCCCGGACACCCCGGTCCCCGCAGCCAGGACAAAGCCATGAAG CCAGCGCTGCTGGAAGTGATGAGGATGAACAGAATCTGCCGGATGGTGCTGGCCACTTGCTTGGGATCCTTTATCCTGGTCATCTTCTAT TTCCAAAGTATGTTGCACCCAGGAATAGCCAGGCCAGAAGAAGGAAGGCCTGTGGTGAGTGGGACAGGAAATGACATCACCACCCCACCG AACAAGGAGCTCCCACCAAGCCCAGAGAAGAAAACAAAGCCTTTGGCCACCACTCAACCTGCAAAGACTTCAACATCGAAAGCCAAAACA CAGCCCACTTCTCTCCCTAAGCAGCCAGCTCCCACCACCATTGGTGGGTTGAATAAAAAACCCATGAGCCTTGCTTCAGGCTTAGTGCCA GCTGCCCCACCCAAACGCCCTGCCGTCGCCTCTGCCAGGCCTTCCATCTTACCTTCAAAAGACGTGAAGCCAAAGCCCATTGCAGATGCA AAGGCTCCTGAGAAGCGGGCCTCACCATCCAAGCCAGCTTCTGCCCCAGCCTCCAGATCTGGGTCCAAGAGCACTCAGACTGTTGCAAAA ACCACAACAGCTGCTGCTGTTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCTCCACGCTCCTGCCCAAGAAGCCCACTGCCATTAAGACT GAGGGAAAACCTGCAGAAGTCAAGAAGATGACTGCAAAGTCTGTACCAGCTGACTTGAGTCGCCCAAAGAGCACCTCCACCAGTTCCATG AAGAAAACCACCACTCTCAGTGGGACAGCCCCCGCTGCAGGGGTGGTTCCCAGCCGAGTCAAGGCCACACCCATGCCCTCCCGGCCCTCC ACAACTCCTTTCATAGACAAGAAGCCCACCTCGGCCAAACCCAGCTCCACCACCCCCCGGCTCAGCCGCCTGGCCACCAATACTTCTGCT CCTGATCTGAAGAATGTCCGCTCCAAGGTTGGCTCCACGGAAAACATCAAGCATCAGCCTGGAGGAGGCCGGGCCAAAGTAGAGAAAAAA ACAGAGGCAGCTGCTACAACCCGAAAGCCTGAATCTAATGCAGTCACTAAAACAGCCGGCCCAATTGCAAGTGCACAGAAACAACCTGCG GGGAAAGTCCAGATAGTCTCCAAAAAAGTGAGCTACAGCCATATTCAGTCCAAGTGTGGTTCCAAGGACAATATTAAGCATGTCCCTGGA GGTGGTAATGTTCAGATTCAGAACAAGAAAGTGGACATCTCTAAGGTCTCCTCCAAGTGTGGGTCTAAGGCTAACATCAAGCACAAGCCT GGTGGAGGAGATGTCAAGATTGAAAGTCAGAAGTTGAACTTCAAGGAGAAGGCCCAGGCCAAGGTGGGATCCCTCGATAATGTGGGCCAC CTACCTGCAGGAGGTGCTGTGAAGACTGAGGGCGGTGGCAGCGAGGCTCCTCTGTGTCCGGGTCCCCCTGCTGGGGAGGAGCCGGCCATC TCTGAGGCAGCGCCTGAAGCTGGCGCCCCCACTTCAGCCAGTGGCCTCAATGGCCACCCCACCCTGTCAGGGGGTGGTGACCAAAGGGAG GCCCAGACCTTGGACAGCCAGATCCAGGAGACAAGCATCTAATGATGACATTCTGGTCTCGTCTTCCGTCTCCCCCGTGTTCCCCTCTTG TCTCCCCTGTTCCCCTCTCCCTTCCCTCCTCCCATGTCACTGCAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGC ACCGACCACGGGGCCGACATTGTCTCCCGCCCCCCACACTTCCCTGGCGGCCCCAACTCGGGCTCCCGGGTCCTTGGCCCCCTTTCCCGG GCTGTCCACTAGACCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCA GCAGCCCTGCCCCACACCTCCTCTCACTCCCCAGCCTGGGCCCATCTCCCTGCTTTGGTCTTGCCCCATCACTGCGCCACTGCTCCGTGG AGGAGGTTGGGAGGGGGTTGGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTTTTGGTTCTT TGGTCCAAACCCAAAAGAAACTGACATGCCCTCCCTTCTCCCTGGATCTACCTGGAGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAG GACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCCACAAATGGGCGCCCCCCCCTCCCCATGCAGGTGGTGTCGGGCCCT TCTTGCTGCCCTGCCCCAAGTTGGGGGTCAGTGCTGCCTGTCCCCATGCTTAACATACCCGCCTAGCTGCTGTCACATTTTTCTTGTTTT GTCCTTTTATTTTTTTCTAATAACCTAAAAACTGGCAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTT AGAGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTGGAGGCGGTGCGGCAGGGAAGAGG GGTGCAGAGGCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCCATTTTGTTGTGTGTAT GCTGCTTTTCTTTTCTAACCAAGAGGCTGGTTTTGGCATCTCTGTCCCATTCCCTGGGATCTGGTGGTCAGCCCTAGGATAAAAAGCCAG GGCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCACCCACACCCTAGGACATGTAAGCCCTCATGTCCAAGGGAGC CTCATGCAGATAGTAGGAAATCAGGTCTGGAAATTTAAAAATAAAAGGCATGAGACTAAGGCTATCTGCTTCCCTTATGCCCTGACTGGA GAGGGGAGGGAGGAGAGGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGAACTGTATT GACACAAAGATTCTTATTGCACTTGTATTTTTTGTATTAAAGTTTGCATGGTTTCTAATAAAGGATTCAAACATAAGTTTGTAGTGAAAT GGCCTGGGAGATTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCCCCAGACTTGGCCTCCTC ATGCCCCCTCCTGACCTCTGCCCTTCTCTGGTCCTGGCATCCCTGGAGAAGGTAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGT GCAGGGAGGCTGTCCTGGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCC AAGCACACACCAGGAAACTGCAGGGGCTCACGGAGGAAGTGCTGCCTGGGCCAGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGA ACACTTCTGCTGTGCCAAGAACATGAGGGAGCCAGTGTTTTGTCAGCAGGAAGAAAGGGCCTGCTGGGATGAAAGTGGGAAGGAAACAGG >In-frame_ENST00000547956_ENST00000426837_TCGA-CD-5800_CHST11_chr12_104851307_+_MAP4_chr3_47919013_length(amino acids)=668AA_start in transcript=15_stop in transcript=2021 MERNEVAFGEKGEGPSDSHSGQRSGSGGGTTITARTPAARPATRQRRPPAGSEEAAERRGGGAGARSQRVHASQHFQTNSGTFHTPARAG GSESGREATPILPLSLAQLCPAPPGLRSARRGPCSCAPGALPGHPGPRSQDKAMKPALLEVMRMNRICRMVLATCLGSFILVIFYFQSML HPGIARPEEGRPVVSGTGNDITTPPNKELPPSPEKKTKPLATTQPAKTSTSKAKTQPTSLPKQPAPTTIGGLNKKPMSLASGLVPAAPPK RPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEGKPA EVKKMTAKSVPADLSRPKSTSTSSMKKTTTLSGTAPAAGVVPSRVKATPMPSRPSTTPFIDKKPTSAKPSSTTPRLSRLATNTSAPDLKN VRSKVGSTENIKHQPGGGRAKVEKKTEAAATTRKPESNAVTKTAGPIASAQKQPAGKVQIVSKKVSYSHIQSKCGSKDNIKHVPGGGNVQ IQNKKVDISKVSSKCGSKANIKHKPGGGDVKIESQKLNFKEKAQAKVGSLDNVGHLPAGGAVKTEGGGSEAPLCPGPPAGEEPAISEAAP -------------------------------------------------------------- >In-frame_ENST00000547956_ENST00000360240_TCGA-CD-5800_CHST11_chr12_104851307_+_MAP4_chr3_47919013_length(transcript)=3186nt_BP=562nt GGAATATATAGATCGTTGGAGCGCAATGAAGTAGCCTTTGGAGAGAAGGGAGAGGGCCCGTCGGACAGCCACAGCGGCCAGCGCAGCGGC AGCGGCGGCGGCACCACCATCACCGCTCGCACCCCAGCCGCCCGGCCCGCGACCAGGCAGCGGCGGCCGCCGGCGGGATCGGAGGAGGCG GCGGAGCGGCGAGGAGGAGGAGCAGGAGCGCGCAGCCAGCGGGTCCACGCATCTCAGCACTTCCAGACCAACTCCGGCACCTTCCACACC CCTGCCCGGGCTGGGGGCTCCGAGAGCGGCCGCGAAGCGACTCCGATCCTCCCTCTGAGCCTTGCTCAGCTCTGCCCCGCGCCTCCCGGG CTCCGGTCCGCGCGGCGGGGTCCCTGCTCCTGCGCCCCGGGCGCGCTTCCCGGACACCCCGGTCCCCGCAGCCAGGACAAAGCCATGAAG CCAGCGCTGCTGGAAGTGATGAGGATGAACAGAATCTGCCGGATGGTGCTGGCCACTTGCTTGGGATCCTTTATCCTGGTCATCTTCTAT TTCCAAAGTATGTTGCACCCAGGAATAGCCAGGCCAGAAGAAGGAAGGCCTGTGGTGAGTGGGACAGGAAATGACATCACCACCCCACCG AACAAGGAGCTCCCACCAAGCCCAGAGAAGAAAACAAAGCCTTTGGCCACCACTCAACCTGCAAAGACTTCAACATCGAAAGCCAAAACA CAGCCCACTTCTCTCCCTAAGCAGCCAGCTCCCACCACCATTGGTGGGTTGAATAAAAAACCCATGAGCCTTGCTTCAGGCTTAGTGCCA GCTGCCCCACCCAAACGCCCTGCCGTCGCCTCTGCCAGGCCTTCCATCTTACCTTCAAAAGACGTGAAGCCAAAGCCCATTGCAGATGCA AAGGCTCCTGAGAAGCGGGCCTCACCATCCAAGCCAGCTTCTGCCCCAGCCTCCAGATCTGGGTCCAAGAGCACTCAGACTGTTGCAAAA ACCACAACAGCTGCTGCTGTTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCTCCACGCTCCTGCCCAAGAAGCCCACTGCCATTAAGACT GAGGGAAAACCTGCAGAAGTCAAGAAGATGACTGCAAAGTCTGTACCAGCTGACTTGAGTCGCCCAAAGAGCACCTCCACCAGTTCCATG AAGAAAACCACCACTCTCAGTGGGACAGCCCCCGCTGCAGGGGTGGTTCCCAGCCGAGTCAAGGCCACACCCATGCCCTCCCGGCCCTCC ACAACTCCTTTCATAGACAAGAAGCCCACCTCGGCCAAACCCAGCTCCACCACCCCCCGGCTCAGCCGCCTGGCCACCAATACTTCTGCT CCTGATCTGAAGAATGTCCGCTCCAAGGTTGGCTCCACGGAAAACATCAAGCATCAGCCTGGAGGAGGCCGGGCCAAAGTAGAGAAAAAA ACAGAGGCAGCTGCTACAACCCGAAAGCCTGAATCTAATGCAGTCACTAAAACAGCCGGCCCAATTGCAAGTGCACAGAAACAACCTGCG GGGAAAGTCCAGATAGTCTCCAAAAAAGTGAGCTACAGCCATATTCAGTCCAAGTGTGGTTCCAAGGACAATATTAAGCATGTCCCTGGA GGTGGTAATGTTCAGATTCAGAACAAGAAAGTGGACATCTCTAAGGTCTCCTCCAAGTGTGGGTCTAAGGCTAACATCAAGCACAAGCCT GGTGGAGGAGATGTCAAGATTGAAAGTCAGAAGTTGAACTTCAAGGAGAAGGCCCAGGCCAAGGTGGGATCCCTCGATAATGTGGGCCAC CTACCTGCAGGAGGTGCTGTGAAGACTGAGGGCGGTGGCAGCGAGGCTCCTCTGTGTCCGGGTCCCCCTGCTGGGGAGGAGCCGGCCATC TCTGAGGCAGCGCCTGAAGCTGGCGCCCCCACTTCAGCCAGTGGCCTCAATGGCCACCCCACCCTGTCAGGGGGTGGTGACCAAAGGGAG GCCCAGACCTTGGACAGCCAGATCCAGGAGACAAGCATCTAATGATGACATTCTGGTCTCGTCTTCCGTCTCCCCCGTGTTCCCCTCTTG TCTCCCCTGTTCCCCTCTCCCTTCCCTCCTCCCATGTCACTGCAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGC ACCGACCACGGGGCCGACATTGTCTCCCGCCCCCCACACTTCCCTGGCGGCCCCAACTCGGGCTCCCGGGTCCTTGGCCCCCTTTCCCGG GCTGTCCACTAGACCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCA GCAGCCCTGCCCCACACCTCCTCTCACTCCCCAGCCTGGGCCCATCTCCCTGCTTTGGTCTTGCCCCATCACTGCGCCACTGCTCCGTGG AGGAGGTTGGGAGGGGGTTGGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTTTTGGTTCTT TGGTCCAAACCCAAAAGAAACTGACATGCCCTCCCTTCTCCCTGGATCTACCTGGAGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAG GACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCCACAAATGGGCGCCCCCCCCTCCCCATGCAGGTGGTGTCGGGCCCT TCTTGCTGCCCTGCCCCAAGTTGGGGGTCAGTGCTGCCTGTCCCCATGCTTAACATACCCGCCTAGCTGCTGTCACATTTTTCTTGTTTT GTCCTTTTATTTTTTTCTAATAACCTAAAAACTGGCAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTT AGAGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTGGAGGCGGTGCGGCAGGGAAGAGG GGTGCAGAGGCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCCATTTTGTTGTGTGTAT GCTGCTTTTCTTTTCTAACCAAGAGGCTGGTTTTGGCATCTCTGTCCCATTCCCTGGGATCTGGTGGTCAGCCCTAGGATAAAAAGCCAG >In-frame_ENST00000547956_ENST00000360240_TCGA-CD-5800_CHST11_chr12_104851307_+_MAP4_chr3_47919013_length(amino acids)=668AA_start in transcript=15_stop in transcript=2021 MERNEVAFGEKGEGPSDSHSGQRSGSGGGTTITARTPAARPATRQRRPPAGSEEAAERRGGGAGARSQRVHASQHFQTNSGTFHTPARAG GSESGREATPILPLSLAQLCPAPPGLRSARRGPCSCAPGALPGHPGPRSQDKAMKPALLEVMRMNRICRMVLATCLGSFILVIFYFQSML HPGIARPEEGRPVVSGTGNDITTPPNKELPPSPEKKTKPLATTQPAKTSTSKAKTQPTSLPKQPAPTTIGGLNKKPMSLASGLVPAAPPK RPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEGKPA EVKKMTAKSVPADLSRPKSTSTSSMKKTTTLSGTAPAAGVVPSRVKATPMPSRPSTTPFIDKKPTSAKPSSTTPRLSRLATNTSAPDLKN VRSKVGSTENIKHQPGGGRAKVEKKTEAAATTRKPESNAVTKTAGPIASAQKQPAGKVQIVSKKVSYSHIQSKCGSKDNIKHVPGGGNVQ IQNKKVDISKVSSKCGSKANIKHKPGGGDVKIESQKLNFKEKAQAKVGSLDNVGHLPAGGAVKTEGGGSEAPLCPGPPAGEEPAISEAAP -------------------------------------------------------------- >In-frame_ENST00000303694_ENST00000383737_TCGA-CD-5800_CHST11_chr12_104851307_+_MAP4_chr3_47919013_length(transcript)=4150nt_BP=557nt ATATAGATCGTTGGAGCGCAATGAAGTAGCCTTTGGAGAGAAGGGAGAGGGCCCGTCGGACAGCCACAGCGGCCAGCGCAGCGGCAGCGG CGGCGGCACCACCATCACCGCTCGCACCCCAGCCGCCCGGCCCGCGACCAGGCAGCGGCGGCCGCCGGCGGGATCGGAGGAGGCGGCGGA GCGGCGAGGAGGAGGAGCAGGAGCGCGCAGCCAGCGGGTCCACGCATCTCAGCACTTCCAGACCAACTCCGGCACCTTCCACACCCCTGC CCGGGCTGGGGGCTCCGAGAGCGGCCGCGAAGCGACTCCGATCCTCCCTCTGAGCCTTGCTCAGCTCTGCCCCGCGCCTCCCGGGCTCCG GTCCGCGCGGCGGGGTCCCTGCTCCTGCGCCCCGGGCGCGCTTCCCGGACACCCCGGTCCCCGCAGCCAGGACAAAGCCATGAAGCCAGC GCTGCTGGAAGTGATGAGGATGAACAGAATCTGCCGGATGGTGCTGGCCACTTGCTTGGGATCCTTTATCCTGGTCATCTTCTATTTCCA AAGTATGTTGCACCCAGGAATAGCCAGGCCAGAAGAAGGAAGGCCTGTGGTGAGTGGGACAGGAAATGACATCACCACCCCACCGAACAA GGAGCTCCCACCAAGCCCAGAGAAGAAAACAAAGCCTTTGGCCACCACTCAACCTGCAAAGACTTCAACATCGAAAGCCAAAACACAGCC CACTTCTCTCCCTAAGCAGCCAGCTCCCACCACCATTGGTGGGTTGAATAAAAAACCCATGAGCCTTGCTTCAGGCTTAGTGCCAGCTGC CCCACCCAAACGCCCTGCCGTCGCCTCTGCCAGGCCTTCCATCTTACCTTCAAAAGACGTGAAGCCAAAGCCCATTGCAGATGCAAAGGC TCCTGAGAAGCGGGCCTCACCATCCAAGCCAGCTTCTGCCCCAGCCTCCAGATCTGGGTCCAAGAGCACTCAGACTGTTGCAAAAACCAC AACAGCTGCTGCTGTTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCTCCACGCTCCTGCCCAAGAAGCCCACTGCCATTAAGACTGAGGG AAAACCTGCAGAAGTCAAGAAGATGACTGCAAAGTCTGTACCAGCTGACTTGAGTCGCCCAAAGAGCACCTCCACCAGTTCCATGAAGAA AACCACCACTCTCAGTGGGACAGCCCCCGCTGCAGGGGTGGTTCCCAGCCGAGTCAAGGCCACACCCATGCCCTCCCGGCCCTCCACAAC TCCTTTCATAGACAAGAAGCCCACCTCGGCCAAACCCAGCTCCACCACCCCCCGGCTCAGCCGCCTGGCCACCAATACTTCTGCTCCTGA TCTGAAGAATGTCCGCTCCAAGGTTGGCTCCACGGAAAACATCAAGCATCAGCCTGGAGGAGGCCGGGTTCAGATTCAGAACAAGAAAGT GGACATCTCTAAGGTCTCCTCCAAGTGTGGGTCTAAGGCTAACATCAAGCACAAGCCTGGTGGAGGAGATGTCAAGATTGAAAGTCAGAA GTTGAACTTCAAGGAGAAGGCCCAGGCCAAGGTGGGATCCCTCGATAATGTGGGCCACCTACCTGCAGGAGGTGCTGTGAAGACTGAGGG CGGTGGCAGCGAGGCTCCTCTGTGTCCGGGTCCCCCTGCTGGGGAGGAGCCGGCCATCTCTGAGGCAGCGCCTGAAGCTGGCGCCCCCAC TTCAGCCAGTGGCCTCAATGGCCACCCCACCCTGTCAGGGGGTGGTGACCAAAGGGAGGCCCAGACCTTGGACAGCCAGATCCAGGAGAC AAGCATCTAATGATGACATTCTGGTCTCGTCTTCCGTCTCCCCCGTGTTCCCCTCTTGTCTCCCCTGTTCCCCTCTCCCTTCCCTCCTCC CATGTCACTGCAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCACGGGGCCGACATTGTCTCCCGCCC CCCACACTTCCCTGGCGGCCCCAACTCGGGCTCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCGC CGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCCACACCTCCTCTCACTCCCC AGCCTGGGCCCATCTCCCTGCTTTGGTCTTGCCCCATCACTGCGCCACTGCTCCGTGGAGGAGGTTGGGAGGGGGTTGGGGTGGTTGAGG CTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTTTTGGTTCTTTGGTCCAAACCCAAAAGAAACTGACATGCCCT CCCTTCTCCCTGGATCTACCTGGAGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTC TCCCTCTGGTCCCACAAATGGGCGCCCCCCCCTCCCCATGCAGGTGGTGTCGGGCCCTTCTTGCTGCCCTGCCCCAAGTTGGGGGTCAGT GCTGCCTGTCCCCATGCTTAACATACCCGCCTAGCTGCTGTCACATTTTTCTTGTTTTGTCCTTTTATTTTTTTCTAATAACCTAAAAAC TGGCAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAGGGCGGAGATATCCTTATGCCA CCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTGGAGGCGGTGCGGCAGGGAAGAGGGGTGCAGAGGCTGTGGCTGGTGAGCCGGTCAG GCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCCATTTTGTTGTGTGTATGCTGCTTTTCTTTTCTAACCAAGAGGCTGGTT TTGGCATCTCTGTCCCATTCCCTGGGATCTGGTGGTCAGCCCTAGGATAAAAAGCCAGGGCTGGAGAACAAGAAAGGGCCAGGAGATGGA ATTCCTTCAGGCCGGCACCCACACCCTAGGACATGTAAGCCCTCATGTCCAAGGGAGCCTCATGCAGATAGTAGGAAATCAGGTCTGGAA ATTTAAAAATAAAAGGCATGAGACTAAGGCTATCTGCTTCCCTTATGCCCTGACTGGAGAGGGGAGGGAGGAGAGGCAAGGCCCACAGAG GGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGAACTGTATTGACACAAAGATTCTTATTGCACTTGTATTTTT TGTATTAAAGTTTGCATGGTTTCTAATAAAGGATTCAAACATAAGTTTGTAGTGAAATGGCCTGGGAGATTCCAAGGGCTTCTCTGGAGG GGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCCCCAGACTTGGCCTCCTCATGCCCCCTCCTGACCTCTGCCCTTCTCTGGT CCTGGCATCCCTGGAGAAGGTAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTGTCCTGGGCCTGACAGGTCCT CCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGCAGGGGCTCACG GAGGAAGTGCTGCCTGGGCCAGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGAGGGAGC CAGTGTTTTGTCAGCAGGAAGAAAGGGCCTGCTGGGATGAAAGTGGGAAGGAAACAGGGTTGCGTAGTCAGGAGACACCTCAGGGGCAAC AGCACAGGCCCAGAGTACCTGCTGCCTCCACTGCGTCTGTCCTGGGGTCATGAGGATGCTGAGGTTGACGACAGGTTCCAGGTCCTTTCA CTCCTTTGGCCAAAGGTTGGGGGTAGGTGGCCCAAGTGGCGTGCTCTCTAGGTAGACAACAGGAGTGGTCAGAGTTCCCTCAAAGGATCC TCCACTCCAGAGCACCTGAGAAGGCCGGGACCAGAGGCCCTGTGTGATGTGTACTCCGCAGCTGTTTGGGGTGGGACATTTCTGTACTTC TCGATTTGCTTATGGCTCAGCCATTACCTGTGTCAGTCCATGATTCTGTTGTAACAGTTTTAAGAGTAAATAAATAAAGCTGCCTGATGT >In-frame_ENST00000303694_ENST00000383737_TCGA-CD-5800_CHST11_chr12_104851307_+_MAP4_chr3_47919013_length(amino acids)=599AA_start in transcript=10_stop in transcript=1809 MERNEVAFGEKGEGPSDSHSGQRSGSGGGTTITARTPAARPATRQRRPPAGSEEAAERRGGGAGARSQRVHASQHFQTNSGTFHTPARAG GSESGREATPILPLSLAQLCPAPPGLRSARRGPCSCAPGALPGHPGPRSQDKAMKPALLEVMRMNRICRMVLATCLGSFILVIFYFQSML HPGIARPEEGRPVVSGTGNDITTPPNKELPPSPEKKTKPLATTQPAKTSTSKAKTQPTSLPKQPAPTTIGGLNKKPMSLASGLVPAAPPK RPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEGKPA EVKKMTAKSVPADLSRPKSTSTSSMKKTTTLSGTAPAAGVVPSRVKATPMPSRPSTTPFIDKKPTSAKPSSTTPRLSRLATNTSAPDLKN VRSKVGSTENIKHQPGGGRVQIQNKKVDISKVSSKCGSKANIKHKPGGGDVKIESQKLNFKEKAQAKVGSLDNVGHLPAGGAVKTEGGGS -------------------------------------------------------------- >In-frame_ENST00000303694_ENST00000395734_TCGA-CD-5800_CHST11_chr12_104851307_+_MAP4_chr3_47919013_length(transcript)=4062nt_BP=557nt ATATAGATCGTTGGAGCGCAATGAAGTAGCCTTTGGAGAGAAGGGAGAGGGCCCGTCGGACAGCCACAGCGGCCAGCGCAGCGGCAGCGG CGGCGGCACCACCATCACCGCTCGCACCCCAGCCGCCCGGCCCGCGACCAGGCAGCGGCGGCCGCCGGCGGGATCGGAGGAGGCGGCGGA GCGGCGAGGAGGAGGAGCAGGAGCGCGCAGCCAGCGGGTCCACGCATCTCAGCACTTCCAGACCAACTCCGGCACCTTCCACACCCCTGC CCGGGCTGGGGGCTCCGAGAGCGGCCGCGAAGCGACTCCGATCCTCCCTCTGAGCCTTGCTCAGCTCTGCCCCGCGCCTCCCGGGCTCCG GTCCGCGCGGCGGGGTCCCTGCTCCTGCGCCCCGGGCGCGCTTCCCGGACACCCCGGTCCCCGCAGCCAGGACAAAGCCATGAAGCCAGC GCTGCTGGAAGTGATGAGGATGAACAGAATCTGCCGGATGGTGCTGGCCACTTGCTTGGGATCCTTTATCCTGGTCATCTTCTATTTCCA AAGTATGTTGCACCCAGGAATAGCCAGGCCAGAAGAAGGAAGGCCTGTGGTGAGTGGGACAGGAAATGACATCACCACCCCACCGAACAA GGAGCTCCCACCAAGCCCAGAGAAGAAAACAAAGCCTTTGGCCACCACTCAACCTGCAAAGACTTCAACATCGAAAGCCAAAACACAGCC CACTTCTCTCCCTAAGCAGCCAGCTCCCACCACCATTGGTGGGTTGAATAAAAAACCCATGAGCCTTGCTTCAGGCTTAGTGCCAGCTGC CCCACCCAAACGCCCTGCCGTCGCCTCTGCCAGGCCTTCCATCTTACCTTCAAAAGACGTGAAGCCAAAGCCCATTGCAGATGCAAAGGC TCCTGAGAAGCGGGCCTCACCATCCAAGCCAGCTTCTGCCCCAGCCTCCAGATCTGGGTCCAAGAGCACTCAGACTGTTGCAAAAACCAC AACAGCTGCTGCTGTTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCTCCACGCTCCTGCCCAAGAAGCCCACTGCCATTAAGACTGAGGG AAAACCTGCAGAAGTCAAGAAGATGACTGCAAAGTCTGTACCAGCTGACTTGAGTCGCCCAAAGAGCACCTCCACCAGTTCCATGAAGAA AACCACCACTCTCAGTGGGACAGCCCCCGCTGCAGGGGTGGTTCCCAGCCGAGTCAAGGCCACACCCATGCCCTCCCGGCCCTCCACAAC TCCTTTCATAGACAAGAAGCCCACCTCGGCCAAACCCAGCTCCACCACCCCCCGGCTCAGCCGCCTGGCCACCAATACTTCTGCTCCTGA TCTGAAGAATGTCCGCTCCAAGGTTGGCTCCACGGAAAACATCAAGCATCAGCCTGGAGGAGGCCGGGCCAAAGTAGAGAAAAAAACAGA GGCAGCTGCTACAACCCGAAAGCCTGAATCTAATGCAGTCACTAAAACAGCCGGCCCAATTGCAAGTGCACAGAAACAACCTGCGGGGAA AGTCCAGATAGTCTCCAAAAAAGTGAGCTACAGCCATATTCAGTCCAAGTGTGGTTCCAAGGACAATATTAAGCATGTCCCTGGAGGTGG TAATGTTCAGATTCAGAACAAGAAAGTGGACATCTCTAAGGTCTCCTCCAAGTGTGGGTCTAAGGCTAACATCAAGCACAAGCCTGGTGG AGGAGATGTCAAGATTGAAAGTCAGAAGTTGAACTTCAAGGAGAAGGCCCAGGCCAAGGTGGGATCCCTCGATAATGTGGGCCACCTACC TGCAGGAGGTGCTGTGAAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCACGGGGCCGACATTGTCTC CCGCCCCCCACACTTCCCTGGCGGCCCCAACTCGGGCTCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTT GGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCCACACCTCCTCTCA CTCCCCAGCCTGGGCCCATCTCCCTGCTTTGGTCTTGCCCCATCACTGCGCCACTGCTCCGTGGAGGAGGTTGGGAGGGGGTTGGGGTGG TTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTTTTGGTTCTTTGGTCCAAACCCAAAAGAAACTGACA TGCCCTCCCTTCTCCCTGGATCTACCTGGAGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCAC TGCCTCTCCCTCTGGTCCCACAAATGGGCGCCCCCCCCTCCCCATGCAGGTGGTGTCGGGCCCTTCTTGCTGCCCTGCCCCAAGTTGGGG GTCAGTGCTGCCTGTCCCCATGCTTAACATACCCGCCTAGCTGCTGTCACATTTTTCTTGTTTTGTCCTTTTATTTTTTTCTAATAACCT AAAAACTGGCAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAGGGCGGAGATATCCTT ATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTGGAGGCGGTGCGGCAGGGAAGAGGGGTGCAGAGGCTGTGGCTGGTGAGCC GGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCCATTTTGTTGTGTGTATGCTGCTTTTCTTTTCTAACCAAGAGG CTGGTTTTGGCATCTCTGTCCCATTCCCTGGGATCTGGTGGTCAGCCCTAGGATAAAAAGCCAGGGCTGGAGAACAAGAAAGGGCCAGGA GATGGAATTCCTTCAGGCCGGCACCCACACCCTAGGACATGTAAGCCCTCATGTCCAAGGGAGCCTCATGCAGATAGTAGGAAATCAGGT CTGGAAATTTAAAAATAAAAGGCATGAGACTAAGGCTATCTGCTTCCCTTATGCCCTGACTGGAGAGGGGAGGGAGGAGAGGCAAGGCCC ACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGAACTGTATTGACACAAAGATTCTTATTGCACTTGT ATTTTTTGTATTAAAGTTTGCATGGTTTCTAATAAAGGATTCAAACATAAGTTTGTAGTGAAATGGCCTGGGAGATTCCAAGGGCTTCTC TGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCCCCAGACTTGGCCTCCTCATGCCCCCTCCTGACCTCTGCCCTTC TCTGGTCCTGGCATCCCTGGAGAAGGTAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTGTCCTGGGCCTGACA GGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGCAGGGG CTCACGGAGGAAGTGCTGCCTGGGCCAGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGA GGGAGCCAGTGTTTTGTCAGCAGGAAGAAAGGGCCTGCTGGGATGAAAGTGGGAAGGAAACAGGGTTGCGTAGTCAGGAGACACCTCAGG GGCAACAGCACAGGCCCAGAGTACCTGCTGCCTCCACTGCGTCTGTCCTGGGGTCATGAGGATGCTGAGGTTGACGACAGGTTCCAGGTC CTTTCACTCCTTTGGCCAAAGGTTGGGGGTAGGTGGCCCAAGTGGCGTGCTCTCTAGGTAGACAACAGGAGTGGTCAGAGTTCCCTCAAA GGATCCTCCACTCCAGAGCACCTGAGAAGGCCGGGACCAGAGGCCCTGTGTGATGTGTACTCCGCAGCTGTTTGGGGTGGGACATTTCTG TACTTCTCGATTTGCTTATGGCTCAGCCATTACCTGTGTCAGTCCATGATTCTGTTGTAACAGTTTTAAGAGTAAATAAATAAAGCTGCC >In-frame_ENST00000303694_ENST00000395734_TCGA-CD-5800_CHST11_chr12_104851307_+_MAP4_chr3_47919013_length(amino acids)=651AA_start in transcript=10_stop in transcript=1965 MERNEVAFGEKGEGPSDSHSGQRSGSGGGTTITARTPAARPATRQRRPPAGSEEAAERRGGGAGARSQRVHASQHFQTNSGTFHTPARAG GSESGREATPILPLSLAQLCPAPPGLRSARRGPCSCAPGALPGHPGPRSQDKAMKPALLEVMRMNRICRMVLATCLGSFILVIFYFQSML HPGIARPEEGRPVVSGTGNDITTPPNKELPPSPEKKTKPLATTQPAKTSTSKAKTQPTSLPKQPAPTTIGGLNKKPMSLASGLVPAAPPK RPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEGKPA EVKKMTAKSVPADLSRPKSTSTSSMKKTTTLSGTAPAAGVVPSRVKATPMPSRPSTTPFIDKKPTSAKPSSTTPRLSRLATNTSAPDLKN VRSKVGSTENIKHQPGGGRAKVEKKTEAAATTRKPESNAVTKTAGPIASAQKQPAGKVQIVSKKVSYSHIQSKCGSKDNIKHVPGGGNVQ IQNKKVDISKVSSKCGSKANIKHKPGGGDVKIESQKLNFKEKAQAKVGSLDNVGHLPAGGAVKIETYRLTFRANARARTDHGADIVSRPP -------------------------------------------------------------- >In-frame_ENST00000303694_ENST00000426837_TCGA-CD-5800_CHST11_chr12_104851307_+_MAP4_chr3_47919013_length(transcript)=3955nt_BP=557nt ATATAGATCGTTGGAGCGCAATGAAGTAGCCTTTGGAGAGAAGGGAGAGGGCCCGTCGGACAGCCACAGCGGCCAGCGCAGCGGCAGCGG CGGCGGCACCACCATCACCGCTCGCACCCCAGCCGCCCGGCCCGCGACCAGGCAGCGGCGGCCGCCGGCGGGATCGGAGGAGGCGGCGGA GCGGCGAGGAGGAGGAGCAGGAGCGCGCAGCCAGCGGGTCCACGCATCTCAGCACTTCCAGACCAACTCCGGCACCTTCCACACCCCTGC CCGGGCTGGGGGCTCCGAGAGCGGCCGCGAAGCGACTCCGATCCTCCCTCTGAGCCTTGCTCAGCTCTGCCCCGCGCCTCCCGGGCTCCG GTCCGCGCGGCGGGGTCCCTGCTCCTGCGCCCCGGGCGCGCTTCCCGGACACCCCGGTCCCCGCAGCCAGGACAAAGCCATGAAGCCAGC GCTGCTGGAAGTGATGAGGATGAACAGAATCTGCCGGATGGTGCTGGCCACTTGCTTGGGATCCTTTATCCTGGTCATCTTCTATTTCCA AAGTATGTTGCACCCAGGAATAGCCAGGCCAGAAGAAGGAAGGCCTGTGGTGAGTGGGACAGGAAATGACATCACCACCCCACCGAACAA GGAGCTCCCACCAAGCCCAGAGAAGAAAACAAAGCCTTTGGCCACCACTCAACCTGCAAAGACTTCAACATCGAAAGCCAAAACACAGCC CACTTCTCTCCCTAAGCAGCCAGCTCCCACCACCATTGGTGGGTTGAATAAAAAACCCATGAGCCTTGCTTCAGGCTTAGTGCCAGCTGC CCCACCCAAACGCCCTGCCGTCGCCTCTGCCAGGCCTTCCATCTTACCTTCAAAAGACGTGAAGCCAAAGCCCATTGCAGATGCAAAGGC TCCTGAGAAGCGGGCCTCACCATCCAAGCCAGCTTCTGCCCCAGCCTCCAGATCTGGGTCCAAGAGCACTCAGACTGTTGCAAAAACCAC AACAGCTGCTGCTGTTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCTCCACGCTCCTGCCCAAGAAGCCCACTGCCATTAAGACTGAGGG AAAACCTGCAGAAGTCAAGAAGATGACTGCAAAGTCTGTACCAGCTGACTTGAGTCGCCCAAAGAGCACCTCCACCAGTTCCATGAAGAA AACCACCACTCTCAGTGGGACAGCCCCCGCTGCAGGGGTGGTTCCCAGCCGAGTCAAGGCCACACCCATGCCCTCCCGGCCCTCCACAAC TCCTTTCATAGACAAGAAGCCCACCTCGGCCAAACCCAGCTCCACCACCCCCCGGCTCAGCCGCCTGGCCACCAATACTTCTGCTCCTGA TCTGAAGAATGTCCGCTCCAAGGTTGGCTCCACGGAAAACATCAAGCATCAGCCTGGAGGAGGCCGGGCCAAAGTAGAGAAAAAAACAGA GGCAGCTGCTACAACCCGAAAGCCTGAATCTAATGCAGTCACTAAAACAGCCGGCCCAATTGCAAGTGCACAGAAACAACCTGCGGGGAA AGTCCAGATAGTCTCCAAAAAAGTGAGCTACAGCCATATTCAGTCCAAGTGTGGTTCCAAGGACAATATTAAGCATGTCCCTGGAGGTGG TAATGTTCAGATTCAGAACAAGAAAGTGGACATCTCTAAGGTCTCCTCCAAGTGTGGGTCTAAGGCTAACATCAAGCACAAGCCTGGTGG AGGAGATGTCAAGATTGAAAGTCAGAAGTTGAACTTCAAGGAGAAGGCCCAGGCCAAGGTGGGATCCCTCGATAATGTGGGCCACCTACC TGCAGGAGGTGCTGTGAAGACTGAGGGCGGTGGCAGCGAGGCTCCTCTGTGTCCGGGTCCCCCTGCTGGGGAGGAGCCGGCCATCTCTGA GGCAGCGCCTGAAGCTGGCGCCCCCACTTCAGCCAGTGGCCTCAATGGCCACCCCACCCTGTCAGGGGGTGGTGACCAAAGGGAGGCCCA GACCTTGGACAGCCAGATCCAGGAGACAAGCATCTAATGATGACATTCTGGTCTCGTCTTCCGTCTCCCCCGTGTTCCCCTCTTGTCTCC CCTGTTCCCCTCTCCCTTCCCTCCTCCCATGTCACTGCAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGA CCACGGGGCCGACATTGTCTCCCGCCCCCCACACTTCCCTGGCGGCCCCAACTCGGGCTCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGT CCACTAGACCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC CCTGCCCCACACCTCCTCTCACTCCCCAGCCTGGGCCCATCTCCCTGCTTTGGTCTTGCCCCATCACTGCGCCACTGCTCCGTGGAGGAG GTTGGGAGGGGGTTGGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTTTTGGTTCTTTGGTC CAAACCCAAAAGAAACTGACATGCCCTCCCTTCTCCCTGGATCTACCTGGAGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGC TGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCCACAAATGGGCGCCCCCCCCTCCCCATGCAGGTGGTGTCGGGCCCTTCTTG CTGCCCTGCCCCAAGTTGGGGGTCAGTGCTGCCTGTCCCCATGCTTAACATACCCGCCTAGCTGCTGTCACATTTTTCTTGTTTTGTCCT TTTATTTTTTTCTAATAACCTAAAAACTGGCAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGG GAACAGGGCGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTGGAGGCGGTGCGGCAGGGAAGAGGGGTGC AGAGGCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCCATTTTGTTGTGTGTATGCTGC TTTTCTTTTCTAACCAAGAGGCTGGTTTTGGCATCTCTGTCCCATTCCCTGGGATCTGGTGGTCAGCCCTAGGATAAAAAGCCAGGGCTG GAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCACCCACACCCTAGGACATGTAAGCCCTCATGTCCAAGGGAGCCTCAT GCAGATAGTAGGAAATCAGGTCTGGAAATTTAAAAATAAAAGGCATGAGACTAAGGCTATCTGCTTCCCTTATGCCCTGACTGGAGAGGG GAGGGAGGAGAGGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGAACTGTATTGACAC AAAGATTCTTATTGCACTTGTATTTTTTGTATTAAAGTTTGCATGGTTTCTAATAAAGGATTCAAACATAAGTTTGTAGTGAAATGGCCT GGGAGATTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCCCCAGACTTGGCCTCCTCATGCC CCCTCCTGACCTCTGCCCTTCTCTGGTCCTGGCATCCCTGGAGAAGGTAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGG GAGGCTGTCCTGGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCA CACACCAGGAAACTGCAGGGGCTCACGGAGGAAGTGCTGCCTGGGCCAGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACT >In-frame_ENST00000303694_ENST00000426837_TCGA-CD-5800_CHST11_chr12_104851307_+_MAP4_chr3_47919013_length(amino acids)=668AA_start in transcript=10_stop in transcript=2016 MERNEVAFGEKGEGPSDSHSGQRSGSGGGTTITARTPAARPATRQRRPPAGSEEAAERRGGGAGARSQRVHASQHFQTNSGTFHTPARAG GSESGREATPILPLSLAQLCPAPPGLRSARRGPCSCAPGALPGHPGPRSQDKAMKPALLEVMRMNRICRMVLATCLGSFILVIFYFQSML HPGIARPEEGRPVVSGTGNDITTPPNKELPPSPEKKTKPLATTQPAKTSTSKAKTQPTSLPKQPAPTTIGGLNKKPMSLASGLVPAAPPK RPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEGKPA EVKKMTAKSVPADLSRPKSTSTSSMKKTTTLSGTAPAAGVVPSRVKATPMPSRPSTTPFIDKKPTSAKPSSTTPRLSRLATNTSAPDLKN VRSKVGSTENIKHQPGGGRAKVEKKTEAAATTRKPESNAVTKTAGPIASAQKQPAGKVQIVSKKVSYSHIQSKCGSKDNIKHVPGGGNVQ IQNKKVDISKVSSKCGSKANIKHKPGGGDVKIESQKLNFKEKAQAKVGSLDNVGHLPAGGAVKTEGGGSEAPLCPGPPAGEEPAISEAAP -------------------------------------------------------------- >In-frame_ENST00000303694_ENST00000360240_TCGA-CD-5800_CHST11_chr12_104851307_+_MAP4_chr3_47919013_length(transcript)=3181nt_BP=557nt ATATAGATCGTTGGAGCGCAATGAAGTAGCCTTTGGAGAGAAGGGAGAGGGCCCGTCGGACAGCCACAGCGGCCAGCGCAGCGGCAGCGG CGGCGGCACCACCATCACCGCTCGCACCCCAGCCGCCCGGCCCGCGACCAGGCAGCGGCGGCCGCCGGCGGGATCGGAGGAGGCGGCGGA GCGGCGAGGAGGAGGAGCAGGAGCGCGCAGCCAGCGGGTCCACGCATCTCAGCACTTCCAGACCAACTCCGGCACCTTCCACACCCCTGC CCGGGCTGGGGGCTCCGAGAGCGGCCGCGAAGCGACTCCGATCCTCCCTCTGAGCCTTGCTCAGCTCTGCCCCGCGCCTCCCGGGCTCCG GTCCGCGCGGCGGGGTCCCTGCTCCTGCGCCCCGGGCGCGCTTCCCGGACACCCCGGTCCCCGCAGCCAGGACAAAGCCATGAAGCCAGC GCTGCTGGAAGTGATGAGGATGAACAGAATCTGCCGGATGGTGCTGGCCACTTGCTTGGGATCCTTTATCCTGGTCATCTTCTATTTCCA AAGTATGTTGCACCCAGGAATAGCCAGGCCAGAAGAAGGAAGGCCTGTGGTGAGTGGGACAGGAAATGACATCACCACCCCACCGAACAA GGAGCTCCCACCAAGCCCAGAGAAGAAAACAAAGCCTTTGGCCACCACTCAACCTGCAAAGACTTCAACATCGAAAGCCAAAACACAGCC CACTTCTCTCCCTAAGCAGCCAGCTCCCACCACCATTGGTGGGTTGAATAAAAAACCCATGAGCCTTGCTTCAGGCTTAGTGCCAGCTGC CCCACCCAAACGCCCTGCCGTCGCCTCTGCCAGGCCTTCCATCTTACCTTCAAAAGACGTGAAGCCAAAGCCCATTGCAGATGCAAAGGC TCCTGAGAAGCGGGCCTCACCATCCAAGCCAGCTTCTGCCCCAGCCTCCAGATCTGGGTCCAAGAGCACTCAGACTGTTGCAAAAACCAC AACAGCTGCTGCTGTTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCTCCACGCTCCTGCCCAAGAAGCCCACTGCCATTAAGACTGAGGG AAAACCTGCAGAAGTCAAGAAGATGACTGCAAAGTCTGTACCAGCTGACTTGAGTCGCCCAAAGAGCACCTCCACCAGTTCCATGAAGAA AACCACCACTCTCAGTGGGACAGCCCCCGCTGCAGGGGTGGTTCCCAGCCGAGTCAAGGCCACACCCATGCCCTCCCGGCCCTCCACAAC TCCTTTCATAGACAAGAAGCCCACCTCGGCCAAACCCAGCTCCACCACCCCCCGGCTCAGCCGCCTGGCCACCAATACTTCTGCTCCTGA TCTGAAGAATGTCCGCTCCAAGGTTGGCTCCACGGAAAACATCAAGCATCAGCCTGGAGGAGGCCGGGCCAAAGTAGAGAAAAAAACAGA GGCAGCTGCTACAACCCGAAAGCCTGAATCTAATGCAGTCACTAAAACAGCCGGCCCAATTGCAAGTGCACAGAAACAACCTGCGGGGAA AGTCCAGATAGTCTCCAAAAAAGTGAGCTACAGCCATATTCAGTCCAAGTGTGGTTCCAAGGACAATATTAAGCATGTCCCTGGAGGTGG TAATGTTCAGATTCAGAACAAGAAAGTGGACATCTCTAAGGTCTCCTCCAAGTGTGGGTCTAAGGCTAACATCAAGCACAAGCCTGGTGG AGGAGATGTCAAGATTGAAAGTCAGAAGTTGAACTTCAAGGAGAAGGCCCAGGCCAAGGTGGGATCCCTCGATAATGTGGGCCACCTACC TGCAGGAGGTGCTGTGAAGACTGAGGGCGGTGGCAGCGAGGCTCCTCTGTGTCCGGGTCCCCCTGCTGGGGAGGAGCCGGCCATCTCTGA GGCAGCGCCTGAAGCTGGCGCCCCCACTTCAGCCAGTGGCCTCAATGGCCACCCCACCCTGTCAGGGGGTGGTGACCAAAGGGAGGCCCA GACCTTGGACAGCCAGATCCAGGAGACAAGCATCTAATGATGACATTCTGGTCTCGTCTTCCGTCTCCCCCGTGTTCCCCTCTTGTCTCC CCTGTTCCCCTCTCCCTTCCCTCCTCCCATGTCACTGCAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGA CCACGGGGCCGACATTGTCTCCCGCCCCCCACACTTCCCTGGCGGCCCCAACTCGGGCTCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGT CCACTAGACCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC CCTGCCCCACACCTCCTCTCACTCCCCAGCCTGGGCCCATCTCCCTGCTTTGGTCTTGCCCCATCACTGCGCCACTGCTCCGTGGAGGAG GTTGGGAGGGGGTTGGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTTTTGGTTCTTTGGTC CAAACCCAAAAGAAACTGACATGCCCTCCCTTCTCCCTGGATCTACCTGGAGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGC TGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCCACAAATGGGCGCCCCCCCCTCCCCATGCAGGTGGTGTCGGGCCCTTCTTG CTGCCCTGCCCCAAGTTGGGGGTCAGTGCTGCCTGTCCCCATGCTTAACATACCCGCCTAGCTGCTGTCACATTTTTCTTGTTTTGTCCT TTTATTTTTTTCTAATAACCTAAAAACTGGCAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGG GAACAGGGCGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTGGAGGCGGTGCGGCAGGGAAGAGGGGTGC AGAGGCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCCATTTTGTTGTGTGTATGCTGC TTTTCTTTTCTAACCAAGAGGCTGGTTTTGGCATCTCTGTCCCATTCCCTGGGATCTGGTGGTCAGCCCTAGGATAAAAAGCCAGGGCTG >In-frame_ENST00000303694_ENST00000360240_TCGA-CD-5800_CHST11_chr12_104851307_+_MAP4_chr3_47919013_length(amino acids)=668AA_start in transcript=10_stop in transcript=2016 MERNEVAFGEKGEGPSDSHSGQRSGSGGGTTITARTPAARPATRQRRPPAGSEEAAERRGGGAGARSQRVHASQHFQTNSGTFHTPARAG GSESGREATPILPLSLAQLCPAPPGLRSARRGPCSCAPGALPGHPGPRSQDKAMKPALLEVMRMNRICRMVLATCLGSFILVIFYFQSML HPGIARPEEGRPVVSGTGNDITTPPNKELPPSPEKKTKPLATTQPAKTSTSKAKTQPTSLPKQPAPTTIGGLNKKPMSLASGLVPAAPPK RPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEGKPA EVKKMTAKSVPADLSRPKSTSTSSMKKTTTLSGTAPAAGVVPSRVKATPMPSRPSTTPFIDKKPTSAKPSSTTPRLSRLATNTSAPDLKN VRSKVGSTENIKHQPGGGRAKVEKKTEAAATTRKPESNAVTKTAGPIASAQKQPAGKVQIVSKKVSYSHIQSKCGSKDNIKHVPGGGNVQ IQNKKVDISKVSSKCGSKANIKHKPGGGDVKIESQKLNFKEKAQAKVGSLDNVGHLPAGGAVKTEGGGSEAPLCPGPPAGEEPAISEAAP -------------------------------------------------------------- |
Top |
Fusion Gene PPI Analysis for CHST11-MAP4 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
Related Drugs for CHST11-MAP4 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Tgene | MAP4 | Q9Y4K4 | DB12010 | Fostamatinib | Inhibitor | Small molecule | Approved|Investigational |
Top |
Related Diseases for CHST11-MAP4 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | MAP4 | C0043094 | Weight Gain | 1 | CTD_human |