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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:CIC-ZFP57 (FusionGDB2 ID:16828) |
Fusion Gene Summary for CIC-ZFP57 |
Fusion gene summary |
Fusion gene information | Fusion gene name: CIC-ZFP57 | Fusion gene ID: 16828 | Hgene | Tgene | Gene symbol | CIC | ZFP57 | Gene ID | 23152 | 346171 |
Gene name | capicua transcriptional repressor | ZFP57 zinc finger protein | |
Synonyms | MRD45 | C6orf40|TNDM1|ZNF698|bA145L22|bA145L22.2 | |
Cytomap | 19q13.2 | 6p22.1 | |
Type of gene | protein-coding | protein-coding | |
Description | protein capicua homolog | zinc finger protein 57 homologzfp-57zinc finger protein 698 | |
Modification date | 20200313 | 20200327 | |
UniProtAcc | Q96RK0 | . | |
Ensembl transtripts involved in fusion gene | ENST00000572681, ENST00000575839, ENST00000160740, ENST00000575354, | ENST00000376881, ENST00000488757, ENST00000376883, ENST00000432222, ENST00000549501, ENST00000549167, ENST00000435906, ENST00000547542, ENST00000548574, ENST00000437216, ENST00000552898, ENST00000552809, ENST00000416974, ENST00000552987, ENST00000548769, ENST00000383628, ENST00000548001, ENST00000548337, ENST00000448114, ENST00000549312, ENST00000553137, ENST00000446005, ENST00000547911, | |
Fusion gene scores | * DoF score | 13 X 12 X 6=936 | 2 X 3 X 2=12 |
# samples | 12 | 2 | |
** MAII score | log2(12/936*10)=-2.96347412397489 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(2/12*10)=0.736965594166206 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: CIC [Title/Abstract] AND ZFP57 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | CIC(42791392)-ZFP57(29641535), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. | CIC-ZFP57 seems lost the major protein functional domain in Hgene partner, which is a transcription factor due to the frame-shifted ORF. CIC-ZFP57 seems lost the major protein functional domain in Hgene partner, which is a CGC due to the frame-shifted ORF. CIC-ZFP57 seems lost the major protein functional domain in Hgene partner, which is a tumor suppressor due to the frame-shifted ORF. CIC-ZFP57 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. CIC-ZFP57 seems lost the major protein functional domain in Tgene partner, which is a transcription factor due to the frame-shifted ORF. CIC-ZFP57 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF. CIC-ZFP57 seems lost the major protein functional domain in Tgene partner, which is a epigenetic factor due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene breakpoints across CIC (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across ZFP57 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | BRCA | TCGA-BH-A1F0-01A | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
ChimerDB4 | BRCA | TCGA-BH-A1F0-01A | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
ChimerDB4 | BRCA | TCGA-BH-A1F0-01A | CIC | chr19 | 42791392 | - | ZFP57 | chr6 | 29641535 | - |
Top |
Fusion Gene ORF analysis for CIC-ZFP57 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000572681 | ENST00000376881 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
Frame-shift | ENST00000572681 | ENST00000488757 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
In-frame | ENST00000572681 | ENST00000376883 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000572681 | ENST00000432222 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000572681 | ENST00000549501 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000572681 | ENST00000549167 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000572681 | ENST00000435906 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000572681 | ENST00000547542 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000572681 | ENST00000548574 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000572681 | ENST00000437216 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000572681 | ENST00000552898 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000572681 | ENST00000552809 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000572681 | ENST00000416974 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000572681 | ENST00000552987 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000572681 | ENST00000548769 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000572681 | ENST00000383628 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000572681 | ENST00000548001 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000572681 | ENST00000548337 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000572681 | ENST00000448114 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000572681 | ENST00000549312 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000572681 | ENST00000553137 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000572681 | ENST00000446005 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000572681 | ENST00000547911 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
intron-3CDS | ENST00000575839 | ENST00000376881 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
intron-3CDS | ENST00000575839 | ENST00000488757 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
intron-3CDS | ENST00000575839 | ENST00000376883 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
intron-intron | ENST00000575839 | ENST00000432222 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
intron-intron | ENST00000575839 | ENST00000549501 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
intron-intron | ENST00000575839 | ENST00000549167 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
intron-intron | ENST00000575839 | ENST00000435906 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
intron-intron | ENST00000575839 | ENST00000547542 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
intron-intron | ENST00000575839 | ENST00000548574 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
intron-intron | ENST00000575839 | ENST00000437216 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
intron-intron | ENST00000575839 | ENST00000552898 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
intron-intron | ENST00000575839 | ENST00000552809 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
intron-intron | ENST00000575839 | ENST00000416974 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
intron-intron | ENST00000575839 | ENST00000552987 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
intron-intron | ENST00000575839 | ENST00000548769 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
intron-intron | ENST00000575839 | ENST00000383628 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
intron-intron | ENST00000575839 | ENST00000548001 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
intron-intron | ENST00000575839 | ENST00000548337 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
intron-intron | ENST00000575839 | ENST00000448114 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
intron-intron | ENST00000575839 | ENST00000549312 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
intron-intron | ENST00000575839 | ENST00000553137 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
intron-intron | ENST00000575839 | ENST00000446005 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
intron-intron | ENST00000575839 | ENST00000547911 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
In-frame | ENST00000160740 | ENST00000376881 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
Frame-shift | ENST00000160740 | ENST00000488757 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
In-frame | ENST00000160740 | ENST00000376883 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000160740 | ENST00000432222 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000160740 | ENST00000549501 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000160740 | ENST00000549167 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000160740 | ENST00000435906 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000160740 | ENST00000547542 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000160740 | ENST00000548574 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000160740 | ENST00000437216 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000160740 | ENST00000552898 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000160740 | ENST00000552809 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000160740 | ENST00000416974 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000160740 | ENST00000552987 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000160740 | ENST00000548769 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000160740 | ENST00000383628 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000160740 | ENST00000548001 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000160740 | ENST00000548337 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000160740 | ENST00000448114 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000160740 | ENST00000549312 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000160740 | ENST00000553137 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000160740 | ENST00000446005 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000160740 | ENST00000547911 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
In-frame | ENST00000575354 | ENST00000376881 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
Frame-shift | ENST00000575354 | ENST00000488757 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
In-frame | ENST00000575354 | ENST00000376883 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000575354 | ENST00000432222 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000575354 | ENST00000549501 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000575354 | ENST00000549167 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000575354 | ENST00000435906 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000575354 | ENST00000547542 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000575354 | ENST00000548574 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000575354 | ENST00000437216 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000575354 | ENST00000552898 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000575354 | ENST00000552809 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000575354 | ENST00000416974 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000575354 | ENST00000552987 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000575354 | ENST00000548769 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000575354 | ENST00000383628 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000575354 | ENST00000548001 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000575354 | ENST00000548337 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000575354 | ENST00000448114 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000575354 | ENST00000549312 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000575354 | ENST00000553137 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000575354 | ENST00000446005 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000575354 | ENST00000547911 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - |
5CDS-intron | ENST00000572681 | ENST00000376881 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000572681 | ENST00000488757 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000572681 | ENST00000376883 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000572681 | ENST00000432222 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000572681 | ENST00000549501 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000572681 | ENST00000549167 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000572681 | ENST00000435906 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000572681 | ENST00000547542 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000572681 | ENST00000548574 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000572681 | ENST00000437216 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000572681 | ENST00000552898 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000572681 | ENST00000552809 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000572681 | ENST00000416974 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000572681 | ENST00000552987 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000572681 | ENST00000548769 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000572681 | ENST00000383628 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000572681 | ENST00000548001 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000572681 | ENST00000548337 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000572681 | ENST00000448114 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000572681 | ENST00000549312 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000572681 | ENST00000553137 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000572681 | ENST00000446005 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000572681 | ENST00000547911 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
intron-intron | ENST00000575839 | ENST00000376881 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
intron-intron | ENST00000575839 | ENST00000488757 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
intron-intron | ENST00000575839 | ENST00000376883 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
intron-intron | ENST00000575839 | ENST00000432222 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
intron-intron | ENST00000575839 | ENST00000549501 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
intron-intron | ENST00000575839 | ENST00000549167 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
intron-intron | ENST00000575839 | ENST00000435906 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
intron-intron | ENST00000575839 | ENST00000547542 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
intron-intron | ENST00000575839 | ENST00000548574 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
intron-intron | ENST00000575839 | ENST00000437216 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
intron-intron | ENST00000575839 | ENST00000552898 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
intron-intron | ENST00000575839 | ENST00000552809 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
intron-intron | ENST00000575839 | ENST00000416974 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
intron-intron | ENST00000575839 | ENST00000552987 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
intron-intron | ENST00000575839 | ENST00000548769 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
intron-intron | ENST00000575839 | ENST00000383628 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
intron-intron | ENST00000575839 | ENST00000548001 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
intron-intron | ENST00000575839 | ENST00000548337 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
intron-intron | ENST00000575839 | ENST00000448114 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
intron-intron | ENST00000575839 | ENST00000549312 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
intron-intron | ENST00000575839 | ENST00000553137 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
intron-intron | ENST00000575839 | ENST00000446005 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
intron-intron | ENST00000575839 | ENST00000547911 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000160740 | ENST00000376881 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000160740 | ENST00000488757 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000160740 | ENST00000376883 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000160740 | ENST00000432222 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000160740 | ENST00000549501 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000160740 | ENST00000549167 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000160740 | ENST00000435906 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000160740 | ENST00000547542 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000160740 | ENST00000548574 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000160740 | ENST00000437216 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000160740 | ENST00000552898 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000160740 | ENST00000552809 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000160740 | ENST00000416974 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000160740 | ENST00000552987 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000160740 | ENST00000548769 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000160740 | ENST00000383628 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000160740 | ENST00000548001 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000160740 | ENST00000548337 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000160740 | ENST00000448114 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000160740 | ENST00000549312 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000160740 | ENST00000553137 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000160740 | ENST00000446005 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000160740 | ENST00000547911 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000575354 | ENST00000376881 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000575354 | ENST00000488757 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000575354 | ENST00000376883 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000575354 | ENST00000432222 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000575354 | ENST00000549501 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000575354 | ENST00000549167 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000575354 | ENST00000435906 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000575354 | ENST00000547542 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000575354 | ENST00000548574 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000575354 | ENST00000437216 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000575354 | ENST00000552898 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000575354 | ENST00000552809 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000575354 | ENST00000416974 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000575354 | ENST00000552987 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000575354 | ENST00000548769 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000575354 | ENST00000383628 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000575354 | ENST00000548001 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000575354 | ENST00000548337 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000575354 | ENST00000448114 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000575354 | ENST00000549312 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000575354 | ENST00000553137 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000575354 | ENST00000446005 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
5CDS-intron | ENST00000575354 | ENST00000547911 | CIC | chr19 | 42791392 | + | ZFP57 | chr6_cox_hap2 | 1160337 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000572681 | CIC | chr19 | 42791392 | + | ENST00000376881 | ZFP57 | chr6 | 29641535 | - | 4614 | 3247 | 68 | 3295 | 1075 |
ENST00000572681 | CIC | chr19 | 42791392 | + | ENST00000376883 | ZFP57 | chr6 | 29641535 | - | 4523 | 3247 | 68 | 3295 | 1075 |
ENST00000160740 | CIC | chr19 | 42791392 | + | ENST00000376881 | ZFP57 | chr6 | 29641535 | - | 2504 | 1137 | 830 | 2395 | 521 |
ENST00000160740 | CIC | chr19 | 42791392 | + | ENST00000376883 | ZFP57 | chr6 | 29641535 | - | 2413 | 1137 | 830 | 2395 | 521 |
ENST00000575354 | CIC | chr19 | 42791392 | + | ENST00000376881 | ZFP57 | chr6 | 29641535 | - | 1859 | 492 | 185 | 1750 | 521 |
ENST00000575354 | CIC | chr19 | 42791392 | + | ENST00000376883 | ZFP57 | chr6 | 29641535 | - | 1768 | 492 | 185 | 1750 | 521 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000572681 | ENST00000376881 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - | 0.003737436 | 0.9962625 |
ENST00000572681 | ENST00000376883 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - | 0.004127581 | 0.99587244 |
ENST00000160740 | ENST00000376881 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - | 0.12888514 | 0.87111485 |
ENST00000160740 | ENST00000376883 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - | 0.13721952 | 0.8627805 |
ENST00000575354 | ENST00000376881 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - | 0.14491233 | 0.85508764 |
ENST00000575354 | ENST00000376883 | CIC | chr19 | 42791392 | + | ZFP57 | chr6 | 29641535 | - | 0.16095063 | 0.8390494 |
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Fusion Genomic Features for CIC-ZFP57 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for CIC-ZFP57 |
Go to FGviewer for the breakpoints of chr19:42791392-chr6:29641535 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
CIC | . |
FUNCTION: Transcriptional repressor which plays a role in development of the central nervous system (CNS). In concert with ATXN1 and ATXN1L, involved in brain development. {ECO:0000250|UniProtKB:Q924A2}. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | CIC | chr19:42791392 | chr6:29641535 | ENST00000575354 | + | 3 | 20 | 42_138 | 150.66666666666666 | 1609.0 | Compositional bias | Note=Pro-rich |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000383628 | 0 | 6 | 16_88 | 0 | 517.0 | Domain | KRAB | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000416974 | 0 | 6 | 16_88 | 0 | 517.0 | Domain | KRAB | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000435906 | 0 | 6 | 16_88 | 0 | 517.0 | Domain | KRAB | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000437216 | 0 | 6 | 16_88 | 0 | 517.0 | Domain | KRAB | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000446005 | 0 | 6 | 16_88 | 0 | 517.0 | Domain | KRAB | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000448114 | 0 | 6 | 16_88 | 0 | 517.0 | Domain | KRAB | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000547542 | 0 | 5 | 16_88 | 0.0 | 517.0 | Domain | KRAB | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548001 | 0 | 5 | 16_88 | 0.0 | 517.0 | Domain | KRAB | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548337 | 0 | 4 | 16_88 | 0 | 537.0 | Domain | KRAB | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548574 | 0 | 4 | 16_88 | 0 | 537.0 | Domain | KRAB | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548769 | 0 | 4 | 16_88 | 0 | 537.0 | Domain | KRAB | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000549167 | 0 | 4 | 16_88 | 0 | 537.0 | Domain | KRAB | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000549312 | 0 | 5 | 16_88 | 0.0 | 517.0 | Domain | KRAB | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000549501 | 0 | 5 | 16_88 | 0.0 | 517.0 | Domain | KRAB | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000552809 | 0 | 4 | 16_88 | 0 | 537.0 | Domain | KRAB | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000552898 | 0 | 5 | 16_88 | 0.0 | 517.0 | Domain | KRAB | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000552987 | 0 | 5 | 16_88 | 0.0 | 517.0 | Domain | KRAB | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000553137 | 0 | 4 | 16_88 | 0 | 537.0 | Domain | KRAB | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000376881 | 3 | 5 | 119_141 | 97.33333333333333 | 517.0 | Zinc finger | C2H2-type 2 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000376881 | 3 | 5 | 147_169 | 97.33333333333333 | 517.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000376881 | 3 | 5 | 175_197 | 97.33333333333333 | 517.0 | Zinc finger | C2H2-type 4 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000376881 | 3 | 5 | 300_322 | 97.33333333333333 | 517.0 | Zinc finger | C2H2-type 5 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000376881 | 3 | 5 | 328_350 | 97.33333333333333 | 517.0 | Zinc finger | C2H2-type 6 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000376881 | 3 | 5 | 356_378 | 97.33333333333333 | 517.0 | Zinc finger | C2H2-type 7%3B degenerate | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000376883 | 4 | 6 | 119_141 | 97.33333333333333 | 517.0 | Zinc finger | C2H2-type 2 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000376883 | 4 | 6 | 147_169 | 97.33333333333333 | 517.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000376883 | 4 | 6 | 175_197 | 97.33333333333333 | 517.0 | Zinc finger | C2H2-type 4 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000376883 | 4 | 6 | 300_322 | 97.33333333333333 | 517.0 | Zinc finger | C2H2-type 5 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000376883 | 4 | 6 | 328_350 | 97.33333333333333 | 517.0 | Zinc finger | C2H2-type 6 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000376883 | 4 | 6 | 356_378 | 97.33333333333333 | 517.0 | Zinc finger | C2H2-type 7%3B degenerate | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000383628 | 0 | 6 | 119_141 | 0 | 517.0 | Zinc finger | C2H2-type 2 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000383628 | 0 | 6 | 147_169 | 0 | 517.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000383628 | 0 | 6 | 175_197 | 0 | 517.0 | Zinc finger | C2H2-type 4 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000383628 | 0 | 6 | 300_322 | 0 | 517.0 | Zinc finger | C2H2-type 5 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000383628 | 0 | 6 | 328_350 | 0 | 517.0 | Zinc finger | C2H2-type 6 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000383628 | 0 | 6 | 356_378 | 0 | 517.0 | Zinc finger | C2H2-type 7%3B degenerate | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000383628 | 0 | 6 | 91_113 | 0 | 517.0 | Zinc finger | C2H2-type 1 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000416974 | 0 | 6 | 119_141 | 0 | 517.0 | Zinc finger | C2H2-type 2 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000416974 | 0 | 6 | 147_169 | 0 | 517.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000416974 | 0 | 6 | 175_197 | 0 | 517.0 | Zinc finger | C2H2-type 4 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000416974 | 0 | 6 | 300_322 | 0 | 517.0 | Zinc finger | C2H2-type 5 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000416974 | 0 | 6 | 328_350 | 0 | 517.0 | Zinc finger | C2H2-type 6 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000416974 | 0 | 6 | 356_378 | 0 | 517.0 | Zinc finger | C2H2-type 7%3B degenerate | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000416974 | 0 | 6 | 91_113 | 0 | 517.0 | Zinc finger | C2H2-type 1 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000435906 | 0 | 6 | 119_141 | 0 | 517.0 | Zinc finger | C2H2-type 2 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000435906 | 0 | 6 | 147_169 | 0 | 517.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000435906 | 0 | 6 | 175_197 | 0 | 517.0 | Zinc finger | C2H2-type 4 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000435906 | 0 | 6 | 300_322 | 0 | 517.0 | Zinc finger | C2H2-type 5 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000435906 | 0 | 6 | 328_350 | 0 | 517.0 | Zinc finger | C2H2-type 6 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000435906 | 0 | 6 | 356_378 | 0 | 517.0 | Zinc finger | C2H2-type 7%3B degenerate | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000435906 | 0 | 6 | 91_113 | 0 | 517.0 | Zinc finger | C2H2-type 1 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000437216 | 0 | 6 | 119_141 | 0 | 517.0 | Zinc finger | C2H2-type 2 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000437216 | 0 | 6 | 147_169 | 0 | 517.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000437216 | 0 | 6 | 175_197 | 0 | 517.0 | Zinc finger | C2H2-type 4 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000437216 | 0 | 6 | 300_322 | 0 | 517.0 | Zinc finger | C2H2-type 5 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000437216 | 0 | 6 | 328_350 | 0 | 517.0 | Zinc finger | C2H2-type 6 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000437216 | 0 | 6 | 356_378 | 0 | 517.0 | Zinc finger | C2H2-type 7%3B degenerate | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000437216 | 0 | 6 | 91_113 | 0 | 517.0 | Zinc finger | C2H2-type 1 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000446005 | 0 | 6 | 119_141 | 0 | 517.0 | Zinc finger | C2H2-type 2 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000446005 | 0 | 6 | 147_169 | 0 | 517.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000446005 | 0 | 6 | 175_197 | 0 | 517.0 | Zinc finger | C2H2-type 4 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000446005 | 0 | 6 | 300_322 | 0 | 517.0 | Zinc finger | C2H2-type 5 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000446005 | 0 | 6 | 328_350 | 0 | 517.0 | Zinc finger | C2H2-type 6 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000446005 | 0 | 6 | 356_378 | 0 | 517.0 | Zinc finger | C2H2-type 7%3B degenerate | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000446005 | 0 | 6 | 91_113 | 0 | 517.0 | Zinc finger | C2H2-type 1 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000448114 | 0 | 6 | 119_141 | 0 | 517.0 | Zinc finger | C2H2-type 2 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000448114 | 0 | 6 | 147_169 | 0 | 517.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000448114 | 0 | 6 | 175_197 | 0 | 517.0 | Zinc finger | C2H2-type 4 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000448114 | 0 | 6 | 300_322 | 0 | 517.0 | Zinc finger | C2H2-type 5 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000448114 | 0 | 6 | 328_350 | 0 | 517.0 | Zinc finger | C2H2-type 6 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000448114 | 0 | 6 | 356_378 | 0 | 517.0 | Zinc finger | C2H2-type 7%3B degenerate | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000448114 | 0 | 6 | 91_113 | 0 | 517.0 | Zinc finger | C2H2-type 1 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000488757 | 2 | 4 | 119_141 | 117.33333333333333 | 537.0 | Zinc finger | C2H2-type 2 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000488757 | 2 | 4 | 147_169 | 117.33333333333333 | 537.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000488757 | 2 | 4 | 175_197 | 117.33333333333333 | 537.0 | Zinc finger | C2H2-type 4 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000488757 | 2 | 4 | 300_322 | 117.33333333333333 | 537.0 | Zinc finger | C2H2-type 5 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000488757 | 2 | 4 | 328_350 | 117.33333333333333 | 537.0 | Zinc finger | C2H2-type 6 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000488757 | 2 | 4 | 356_378 | 117.33333333333333 | 537.0 | Zinc finger | C2H2-type 7%3B degenerate | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000547542 | 0 | 5 | 119_141 | 0.0 | 517.0 | Zinc finger | C2H2-type 2 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000547542 | 0 | 5 | 147_169 | 0.0 | 517.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000547542 | 0 | 5 | 175_197 | 0.0 | 517.0 | Zinc finger | C2H2-type 4 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000547542 | 0 | 5 | 300_322 | 0.0 | 517.0 | Zinc finger | C2H2-type 5 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000547542 | 0 | 5 | 328_350 | 0.0 | 517.0 | Zinc finger | C2H2-type 6 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000547542 | 0 | 5 | 356_378 | 0.0 | 517.0 | Zinc finger | C2H2-type 7%3B degenerate | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000547542 | 0 | 5 | 91_113 | 0.0 | 517.0 | Zinc finger | C2H2-type 1 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548001 | 0 | 5 | 119_141 | 0.0 | 517.0 | Zinc finger | C2H2-type 2 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548001 | 0 | 5 | 147_169 | 0.0 | 517.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548001 | 0 | 5 | 175_197 | 0.0 | 517.0 | Zinc finger | C2H2-type 4 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548001 | 0 | 5 | 300_322 | 0.0 | 517.0 | Zinc finger | C2H2-type 5 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548001 | 0 | 5 | 328_350 | 0.0 | 517.0 | Zinc finger | C2H2-type 6 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548001 | 0 | 5 | 356_378 | 0.0 | 517.0 | Zinc finger | C2H2-type 7%3B degenerate | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548001 | 0 | 5 | 91_113 | 0.0 | 517.0 | Zinc finger | C2H2-type 1 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548337 | 0 | 4 | 119_141 | 0 | 537.0 | Zinc finger | C2H2-type 2 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548337 | 0 | 4 | 147_169 | 0 | 537.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548337 | 0 | 4 | 175_197 | 0 | 537.0 | Zinc finger | C2H2-type 4 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548337 | 0 | 4 | 300_322 | 0 | 537.0 | Zinc finger | C2H2-type 5 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548337 | 0 | 4 | 328_350 | 0 | 537.0 | Zinc finger | C2H2-type 6 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548337 | 0 | 4 | 356_378 | 0 | 537.0 | Zinc finger | C2H2-type 7%3B degenerate | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548337 | 0 | 4 | 91_113 | 0 | 537.0 | Zinc finger | C2H2-type 1 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548574 | 0 | 4 | 119_141 | 0 | 537.0 | Zinc finger | C2H2-type 2 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548574 | 0 | 4 | 147_169 | 0 | 537.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548574 | 0 | 4 | 175_197 | 0 | 537.0 | Zinc finger | C2H2-type 4 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548574 | 0 | 4 | 300_322 | 0 | 537.0 | Zinc finger | C2H2-type 5 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548574 | 0 | 4 | 328_350 | 0 | 537.0 | Zinc finger | C2H2-type 6 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548574 | 0 | 4 | 356_378 | 0 | 537.0 | Zinc finger | C2H2-type 7%3B degenerate | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548574 | 0 | 4 | 91_113 | 0 | 537.0 | Zinc finger | C2H2-type 1 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548769 | 0 | 4 | 119_141 | 0 | 537.0 | Zinc finger | C2H2-type 2 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548769 | 0 | 4 | 147_169 | 0 | 537.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548769 | 0 | 4 | 175_197 | 0 | 537.0 | Zinc finger | C2H2-type 4 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548769 | 0 | 4 | 300_322 | 0 | 537.0 | Zinc finger | C2H2-type 5 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548769 | 0 | 4 | 328_350 | 0 | 537.0 | Zinc finger | C2H2-type 6 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548769 | 0 | 4 | 356_378 | 0 | 537.0 | Zinc finger | C2H2-type 7%3B degenerate | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000548769 | 0 | 4 | 91_113 | 0 | 537.0 | Zinc finger | C2H2-type 1 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000549167 | 0 | 4 | 119_141 | 0 | 537.0 | Zinc finger | C2H2-type 2 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000549167 | 0 | 4 | 147_169 | 0 | 537.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000549167 | 0 | 4 | 175_197 | 0 | 537.0 | Zinc finger | C2H2-type 4 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000549167 | 0 | 4 | 300_322 | 0 | 537.0 | Zinc finger | C2H2-type 5 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000549167 | 0 | 4 | 328_350 | 0 | 537.0 | Zinc finger | C2H2-type 6 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000549167 | 0 | 4 | 356_378 | 0 | 537.0 | Zinc finger | C2H2-type 7%3B degenerate | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000549167 | 0 | 4 | 91_113 | 0 | 537.0 | Zinc finger | C2H2-type 1 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000549312 | 0 | 5 | 119_141 | 0.0 | 517.0 | Zinc finger | C2H2-type 2 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000549312 | 0 | 5 | 147_169 | 0.0 | 517.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000549312 | 0 | 5 | 175_197 | 0.0 | 517.0 | Zinc finger | C2H2-type 4 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000549312 | 0 | 5 | 300_322 | 0.0 | 517.0 | Zinc finger | C2H2-type 5 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000549312 | 0 | 5 | 328_350 | 0.0 | 517.0 | Zinc finger | C2H2-type 6 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000549312 | 0 | 5 | 356_378 | 0.0 | 517.0 | Zinc finger | C2H2-type 7%3B degenerate | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000549312 | 0 | 5 | 91_113 | 0.0 | 517.0 | Zinc finger | C2H2-type 1 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000549501 | 0 | 5 | 119_141 | 0.0 | 517.0 | Zinc finger | C2H2-type 2 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000549501 | 0 | 5 | 147_169 | 0.0 | 517.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000549501 | 0 | 5 | 175_197 | 0.0 | 517.0 | Zinc finger | C2H2-type 4 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000549501 | 0 | 5 | 300_322 | 0.0 | 517.0 | Zinc finger | C2H2-type 5 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000549501 | 0 | 5 | 328_350 | 0.0 | 517.0 | Zinc finger | C2H2-type 6 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000549501 | 0 | 5 | 356_378 | 0.0 | 517.0 | Zinc finger | C2H2-type 7%3B degenerate | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000549501 | 0 | 5 | 91_113 | 0.0 | 517.0 | Zinc finger | C2H2-type 1 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000552809 | 0 | 4 | 119_141 | 0 | 537.0 | Zinc finger | C2H2-type 2 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000552809 | 0 | 4 | 147_169 | 0 | 537.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000552809 | 0 | 4 | 175_197 | 0 | 537.0 | Zinc finger | C2H2-type 4 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000552809 | 0 | 4 | 300_322 | 0 | 537.0 | Zinc finger | C2H2-type 5 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000552809 | 0 | 4 | 328_350 | 0 | 537.0 | Zinc finger | C2H2-type 6 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000552809 | 0 | 4 | 356_378 | 0 | 537.0 | Zinc finger | C2H2-type 7%3B degenerate | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000552809 | 0 | 4 | 91_113 | 0 | 537.0 | Zinc finger | C2H2-type 1 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000552898 | 0 | 5 | 119_141 | 0.0 | 517.0 | Zinc finger | C2H2-type 2 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000552898 | 0 | 5 | 147_169 | 0.0 | 517.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000552898 | 0 | 5 | 175_197 | 0.0 | 517.0 | Zinc finger | C2H2-type 4 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000552898 | 0 | 5 | 300_322 | 0.0 | 517.0 | Zinc finger | C2H2-type 5 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000552898 | 0 | 5 | 328_350 | 0.0 | 517.0 | Zinc finger | C2H2-type 6 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000552898 | 0 | 5 | 356_378 | 0.0 | 517.0 | Zinc finger | C2H2-type 7%3B degenerate | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000552898 | 0 | 5 | 91_113 | 0.0 | 517.0 | Zinc finger | C2H2-type 1 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000552987 | 0 | 5 | 119_141 | 0.0 | 517.0 | Zinc finger | C2H2-type 2 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000552987 | 0 | 5 | 147_169 | 0.0 | 517.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000552987 | 0 | 5 | 175_197 | 0.0 | 517.0 | Zinc finger | C2H2-type 4 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000552987 | 0 | 5 | 300_322 | 0.0 | 517.0 | Zinc finger | C2H2-type 5 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000552987 | 0 | 5 | 328_350 | 0.0 | 517.0 | Zinc finger | C2H2-type 6 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000552987 | 0 | 5 | 356_378 | 0.0 | 517.0 | Zinc finger | C2H2-type 7%3B degenerate | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000552987 | 0 | 5 | 91_113 | 0.0 | 517.0 | Zinc finger | C2H2-type 1 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000553137 | 0 | 4 | 119_141 | 0 | 537.0 | Zinc finger | C2H2-type 2 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000553137 | 0 | 4 | 147_169 | 0 | 537.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000553137 | 0 | 4 | 175_197 | 0 | 537.0 | Zinc finger | C2H2-type 4 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000553137 | 0 | 4 | 300_322 | 0 | 537.0 | Zinc finger | C2H2-type 5 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000553137 | 0 | 4 | 328_350 | 0 | 537.0 | Zinc finger | C2H2-type 6 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000553137 | 0 | 4 | 356_378 | 0 | 537.0 | Zinc finger | C2H2-type 7%3B degenerate | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000553137 | 0 | 4 | 91_113 | 0 | 537.0 | Zinc finger | C2H2-type 1 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | CIC | chr19:42791392 | chr6:29641535 | ENST00000575354 | + | 3 | 20 | 1524_1601 | 150.66666666666666 | 1609.0 | Compositional bias | Note=Pro-rich |
Hgene | CIC | chr19:42791392 | chr6:29641535 | ENST00000575354 | + | 3 | 20 | 508_1303 | 150.66666666666666 | 1609.0 | Compositional bias | Note=Pro-rich |
Hgene | CIC | chr19:42791392 | chr6:29641535 | ENST00000575354 | + | 3 | 20 | 200_268 | 150.66666666666666 | 1609.0 | DNA binding | HMG box |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000376881 | 3 | 5 | 16_88 | 97.33333333333333 | 517.0 | Domain | KRAB | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000376883 | 4 | 6 | 16_88 | 97.33333333333333 | 517.0 | Domain | KRAB | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000488757 | 2 | 4 | 16_88 | 117.33333333333333 | 537.0 | Domain | KRAB | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000376881 | 3 | 5 | 91_113 | 97.33333333333333 | 517.0 | Zinc finger | C2H2-type 1 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000376883 | 4 | 6 | 91_113 | 97.33333333333333 | 517.0 | Zinc finger | C2H2-type 1 | |
Tgene | ZFP57 | chr19:42791392 | chr6:29641535 | ENST00000488757 | 2 | 4 | 91_113 | 117.33333333333333 | 537.0 | Zinc finger | C2H2-type 1 |
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Fusion Gene Sequence for CIC-ZFP57 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000572681_ENST00000376881_TCGA-BH-A1F0-01A_CIC_chr19_42791392_+_ZFP57_chr6_29641535_length(transcript)=4614nt_BP=3247nt GTGCCGCTACCGCTGCCACTGAGAGGAGCCACCGGCGACGCCAGAGCCAGGAATACGGGTGGACAAAAATGAAGCCAATGAAGAAGGCAT GCACTGGCCTTTCAGGTCCTGGCAGTGGCAGCAAGTCCCCCCCAGCCACCAGGGCCAAGGCTCTGAGGCGGCGAGGGGCTGGGGAGGGTG ACAAGCCAGAGGAGGAGGATGACGAGGCACAGCAGCCGCAACCACAGTCCGGGCCCGAAGAGGCTGAGGAAGGGGAGGAGGAGGAGGCTG AGCGGGGCCCTGGGGCTGAAGGTCCTCCACTGGAGCTGCACCCTGGCGACCCGGCTCCAGGCCCAGCAGAGGACCCCAAAGGGGATGGGG AGGCAGGCCGCTGGGAGCCCTCACTCAGCCGCAAGACAGCCACGTTCAAGTCTCGAGCGCCCAAGAAGAAGTATGTGGAGGAGCACGGAG CTGGCAGCAGTGGGGTGGCTGGGGCCCCTGAAGAGCGGGTGCGGACCCCTGAGGAGGCCAGTGGCCTGGGGGTGCCTCCACGGCCACCCA CCTCCACTCGTTCCTCCTCCACTGACACAGCCAGCGAGCACTCGGCGGACCTGGAGGATGAGCCGGCTGAGGCTTGTGGTCCAGGCCCTT GGCCCCCTGGCAGCACCAGTGGCAGCTATGACCTGCGGCAGCTGCGGTCCCAGCGGGTGCTGGCTCGGCGTGGTGATGGCCTTTTCCTGC CGGCTGTGGTGCGCCAGGTGCGCCGAAGCCAGGACCTGGGCGTGCAGTTCCCTGGTGACCGAGCCCTGACTTTCTATGAGGGGGTGCCAG GCGCTGGTGTGGATGTAGTTTTGGATGCCACACCCCCACCAGGTGCCCTGGTGGTGGGCACAGCTGTCTGTACCTGTGTGGAGCCCGGCG TGGCTGCCTACCGGGAAGGTGTGGTGGTGGAGGTGGCCACCAAGCCAGCTGCCTACAAGGTCCGTCTCAGCCCTGGCCCCAGCTCCCAGC CAGGCCTACCAGGCAGCCTCCCGCAGCCCCCACAGCCACTGCACCGTGAGCCAGAGGAGGCTGTGTGGGTGGCCCGCTCCAGCCTACGCC TGCTGCGCCCCCCCTGGGAACCTGAGACCATGCTGAGGAAGCCCCCTACAGGCCCTGAGGAAGAGCAGGCAGAGCCTGGGGCCACCCTGC CACCCTGCCCTGCTGCCCTGGACCCCAAACAGCCCGAGGATGCTGAGGTCTCTAAGATCAGCTTTGGTGGCAACCTGGGTACTCACTGTG AGGAGGGCGAGGAGAAGCACCCTCCAGCCCTGGGTACCCCAGCCCTGCTCCCACTGCCCCCACCCCAGCTCCTGTCACCACCACCCAAGT CTCCAGCCTTTGTGGGCCCCGGCCGCCCTGGCGAGCAGCCCTCGCCCTGCCAGGAGGGGAGCCAGGGCGGCAGCCGCAGCAGCAGCGTGG CCTCCCTGGAAAAGGGGACAGCACCGGCAGCCCGGGCCCGCACGCCACTGACAGCCGCCCAGCAGAAGTACAAGAAGGGCGATGTGGTCT GCACACCCAGCGGAATACGAAAGAAGTTCAACGGCAAGCAGTGGCGCCGGCTGTGCTCACGAGATGGCTGCATGAAGGAGTCACAGCGGC GAGGCTACTGCTCACGCCACCTGTCCATGCGAACCAAAGAGATGGAAGGCCTGGCAGACAGTGGGCCTGGCGGGGCGGGCCGGCCCGCGG CCGTGGCAGCCCGTGAGGGCAGCACGGAGTTTGACTGGGGTGATGAGACGTCGAGGGACAGTGAGGCCAGCAGTGTGGCGGCTCGTGGAG ACTCACGGCCACGCCTGGTGGCCCCTGCTGACTTGTCACGCTTTGAGTTCGACGAGTGTGAGGCGGCCGTGATGCTGGTGTCGCTGGGCA GCTCGCGCTCAGGCACGCCCTCCTTCTCACCCGTCTCCACTCAATCGCCCTTCTCGCCAGCCCCATCACCCTCACCCTCACCACTCTTCG GCTTCCGCCCTGCCAACTTTAGCCCCATCAATGCCTCACCAGTCATCCAGCGCACTGCAGTCCGCAGTCGCCACCTGAGCGCCAGCACCC CTAAGGCAGGCGTGCTGACGCCACCAGACCTGGGCCCCCACCCACCGCCACCTGCCCCCCGAGAGCGCCACTCCTCTGGAATCCTACCCA CCTTCCAGACCAACCTGACCTTCACCGTGCCCATCAGCCCTGGGCGACGGAAGACAGAGCTGTTGCCGCATCCAGGGGCCTTGGGGGCCC CTGGCGCAGGGGGTGGAGGAGCCGCCCCAGACTTTCCCAAGAGTGACAGCTTAGACTCTGGTGTGGACTCAGTGTCCCACACACCTACAC CCTCCACGCCGGCTGGCTTCCGGGCCGTGTCCCCTGCTGTGCCCTTCTCTCGCTCCCGCCAGCCCTCACCATTGCTGCTGTTGCCACCCC CTGCCGGCCTGACCTCGGATCCAGGGCCCTCTGTGCGCAGGGTGCCTGCTGTGCAGCGGGACTCACCTGTTATTGTCCGCAACCCTGATG TGCCACTGCCCTCCAAATTCCCTGGGGAGGTGGGCACTGCTGGTGAGGTGCGGGCTGGGGGACCTGGGCGGGGCTGCCGTGAAACCCCAG TGCCCCCTGGGGTGGCCAGTGGGAAGCCTGGCCTGCCCCCACCTCTGCCAGCCCCCGTGCCCATCACCGTGCCTCCAGCTGCACCAACTG CCGTGGCCCAGCCGATGCCCGCCTTTGGCCTGGCTTCTTCACCCTTTCAGCCTGTGGCCTTCCACCCCTCACCTGCTGCCCTGTTGCCCG TTTTGGTGCCCAGCAGCTATACCAGCCACCCTGCCCCCAAGAAGGAAGTCATCATGGGCCGGCCTGGAACAGTGTGGACGAATGTGGAAC CTCGCTCTGTGGCTGTGTTCCCTTGGCACTCCTTAGTCCCCTTCCTGGCACCCAGCCAGCCTGACCCCTCCGTGCAGCCGAGCGAGGCCC AGCAACCTGCCAGCCACCCAGTGGCCTCCAACCAGAGCAAAGAACCTGCTGAGTCGGCAGCTGTTGCTCATGAACGGCCACCAGGTGGGA CAGGGAGTGCTGACCCTGAGCGGCCCCCTGGAGCCACATGCCCTGAGAGCCCAGGACCCGGACCCCCACACCCTTTGGGGGTGGTGGAAT CTGGTAAGGGTCCGCCTCCCACCACGGAGGAGGAGGCCTCCGGCCCCCCAGGAGAGCCCCGGCTGGACAGTGAGACAGAGAGTGACCATG ATGATGCAAGGCAAGAAGAAAGAGCTTCGAGAACAACATCCCAGTCTGAGAGATGAGGGGACTAGTGATGACAAGGTCTTCCTTGCATGC AGAGGGGCCGGCCAGTGCCCCCTATCTGCCCCAGCTGGGACTATGGACAGGACCCGGGTGCTTCAAGCATCCCAGGCTGGGCCACCCTTT TTTTGCTACACCTGTGGCAAATGTTTCAGCAGGCGCTCCTACCTCTATAGCCACCAGTTTGTTCACAATCCCAAGCTGACTAACAGCTGC AGTCAGTGTGGGAAGTTGTTTCGGAGCCCCAAGTCCCTCAGCTATCACAGACGCATGCATCTTGGGGAGAGGCCCTTCTGTTGCACGCTC TGTGACAAGACCTACTGTGATGCTTCTGGACTAAGTCGTCACCGCCGCGTCCATCTGGGTTACCGGCCCCATTCATGCTCTGTGTGTGGG AAGAGCTTCCGGGACCAGTCTGAGCTCAAACGCCACCAGAAGATACACCAAAACCAGGAGCCAGTGGATGGAAACCAGGAGTGTACTTTG AGGATTCCAGGCACCCAGGCTGAATTCCAGACACCCATCGCCAGAAGCCAGAGGTCCATCCAGGGGCTTTTGGATGTGAACCATGCACCA GTGGCCAGGTCCCAGGAACCCATATTTAGAACTGAGGGTCCTATGGCCCAGAACCAGGCATCTGTACTTAAGAACCAAGCACCTGTGACC AGGACCCAGGCACCCATCACTGGAACCCTCTGTCAGGATGCCAGATCCAACTCTCATCCAGTGAAGCCCTCAAGACTCAATGTCTTCTGT TGCCCCCATTGTTCTTTGACTTTTAGCAAGAAATCCTATCTCTCCAGACACCAGAAGGCCCACCTCACAGAGCCGCCCAACTACTGCTTC CATTGCAGCAAGTCTTTCAGCTCATTTTCCAGGCTGGTCAGACACCAGCAGACCCACTGGAAGCAGAAGAGCTACCTTTGCCCTATCTGT GACCTCTCCTTTGGGGAGAAAGAGGGCCTTATGGATCACTGGAGGGGCTATAAAGGCAAGGACCTGTGCCAGAGCAGCCACCATAAATGC CGGGTGATCCTGGGCCAGTGGCTTGGCTTCTCTCATGATGTCCCCACTATGGCTGGGGAGGAATGGAAGCATGGAGGTGATCAATCTCCC CCCAGGATCCATACCCCCAGGAGAAGAGGCCTAAGAGAGAAGGCCTGCAAAGGAGACAAAACAAAGGAGGCAGTGAGCATCTTGAAACAT AAATAAATGGCCTTTCTGACTGAGCTCTTTCTTTGTGTTTAGTTTTCCTGAGGACTGACCTCTGGGGTAATGAGGCTGGAGTAGAGGGAG >In-frame_ENST00000572681_ENST00000376881_TCGA-BH-A1F0-01A_CIC_chr19_42791392_+_ZFP57_chr6_29641535_length(amino acids)=1075AA_start in transcript=68_stop in transcript=3295 MKPMKKACTGLSGPGSGSKSPPATRAKALRRRGAGEGDKPEEEDDEAQQPQPQSGPEEAEEGEEEEAERGPGAEGPPLELHPGDPAPGPA EDPKGDGEAGRWEPSLSRKTATFKSRAPKKKYVEEHGAGSSGVAGAPEERVRTPEEASGLGVPPRPPTSTRSSSTDTASEHSADLEDEPA EACGPGPWPPGSTSGSYDLRQLRSQRVLARRGDGLFLPAVVRQVRRSQDLGVQFPGDRALTFYEGVPGAGVDVVLDATPPPGALVVGTAV CTCVEPGVAAYREGVVVEVATKPAAYKVRLSPGPSSQPGLPGSLPQPPQPLHREPEEAVWVARSSLRLLRPPWEPETMLRKPPTGPEEEQ AEPGATLPPCPAALDPKQPEDAEVSKISFGGNLGTHCEEGEEKHPPALGTPALLPLPPPQLLSPPPKSPAFVGPGRPGEQPSPCQEGSQG GSRSSSVASLEKGTAPAARARTPLTAAQQKYKKGDVVCTPSGIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEMEGLADSGP GGAGRPAAVAAREGSTEFDWGDETSRDSEASSVAARGDSRPRLVAPADLSRFEFDECEAAVMLVSLGSSRSGTPSFSPVSTQSPFSPAPS PSPSPLFGFRPANFSPINASPVIQRTAVRSRHLSASTPKAGVLTPPDLGPHPPPPAPRERHSSGILPTFQTNLTFTVPISPGRRKTELLP HPGALGAPGAGGGGAAPDFPKSDSLDSGVDSVSHTPTPSTPAGFRAVSPAVPFSRSRQPSPLLLLPPPAGLTSDPGPSVRRVPAVQRDSP VIVRNPDVPLPSKFPGEVGTAGEVRAGGPGRGCRETPVPPGVASGKPGLPPPLPAPVPITVPPAAPTAVAQPMPAFGLASSPFQPVAFHP SPAALLPVLVPSSYTSHPAPKKEVIMGRPGTVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQPSEAQQPASHPVASNQSKEPAESAAVA -------------------------------------------------------------- >In-frame_ENST00000572681_ENST00000376883_TCGA-BH-A1F0-01A_CIC_chr19_42791392_+_ZFP57_chr6_29641535_length(transcript)=4523nt_BP=3247nt GTGCCGCTACCGCTGCCACTGAGAGGAGCCACCGGCGACGCCAGAGCCAGGAATACGGGTGGACAAAAATGAAGCCAATGAAGAAGGCAT GCACTGGCCTTTCAGGTCCTGGCAGTGGCAGCAAGTCCCCCCCAGCCACCAGGGCCAAGGCTCTGAGGCGGCGAGGGGCTGGGGAGGGTG ACAAGCCAGAGGAGGAGGATGACGAGGCACAGCAGCCGCAACCACAGTCCGGGCCCGAAGAGGCTGAGGAAGGGGAGGAGGAGGAGGCTG AGCGGGGCCCTGGGGCTGAAGGTCCTCCACTGGAGCTGCACCCTGGCGACCCGGCTCCAGGCCCAGCAGAGGACCCCAAAGGGGATGGGG AGGCAGGCCGCTGGGAGCCCTCACTCAGCCGCAAGACAGCCACGTTCAAGTCTCGAGCGCCCAAGAAGAAGTATGTGGAGGAGCACGGAG CTGGCAGCAGTGGGGTGGCTGGGGCCCCTGAAGAGCGGGTGCGGACCCCTGAGGAGGCCAGTGGCCTGGGGGTGCCTCCACGGCCACCCA CCTCCACTCGTTCCTCCTCCACTGACACAGCCAGCGAGCACTCGGCGGACCTGGAGGATGAGCCGGCTGAGGCTTGTGGTCCAGGCCCTT GGCCCCCTGGCAGCACCAGTGGCAGCTATGACCTGCGGCAGCTGCGGTCCCAGCGGGTGCTGGCTCGGCGTGGTGATGGCCTTTTCCTGC CGGCTGTGGTGCGCCAGGTGCGCCGAAGCCAGGACCTGGGCGTGCAGTTCCCTGGTGACCGAGCCCTGACTTTCTATGAGGGGGTGCCAG GCGCTGGTGTGGATGTAGTTTTGGATGCCACACCCCCACCAGGTGCCCTGGTGGTGGGCACAGCTGTCTGTACCTGTGTGGAGCCCGGCG TGGCTGCCTACCGGGAAGGTGTGGTGGTGGAGGTGGCCACCAAGCCAGCTGCCTACAAGGTCCGTCTCAGCCCTGGCCCCAGCTCCCAGC CAGGCCTACCAGGCAGCCTCCCGCAGCCCCCACAGCCACTGCACCGTGAGCCAGAGGAGGCTGTGTGGGTGGCCCGCTCCAGCCTACGCC TGCTGCGCCCCCCCTGGGAACCTGAGACCATGCTGAGGAAGCCCCCTACAGGCCCTGAGGAAGAGCAGGCAGAGCCTGGGGCCACCCTGC CACCCTGCCCTGCTGCCCTGGACCCCAAACAGCCCGAGGATGCTGAGGTCTCTAAGATCAGCTTTGGTGGCAACCTGGGTACTCACTGTG AGGAGGGCGAGGAGAAGCACCCTCCAGCCCTGGGTACCCCAGCCCTGCTCCCACTGCCCCCACCCCAGCTCCTGTCACCACCACCCAAGT CTCCAGCCTTTGTGGGCCCCGGCCGCCCTGGCGAGCAGCCCTCGCCCTGCCAGGAGGGGAGCCAGGGCGGCAGCCGCAGCAGCAGCGTGG CCTCCCTGGAAAAGGGGACAGCACCGGCAGCCCGGGCCCGCACGCCACTGACAGCCGCCCAGCAGAAGTACAAGAAGGGCGATGTGGTCT GCACACCCAGCGGAATACGAAAGAAGTTCAACGGCAAGCAGTGGCGCCGGCTGTGCTCACGAGATGGCTGCATGAAGGAGTCACAGCGGC GAGGCTACTGCTCACGCCACCTGTCCATGCGAACCAAAGAGATGGAAGGCCTGGCAGACAGTGGGCCTGGCGGGGCGGGCCGGCCCGCGG CCGTGGCAGCCCGTGAGGGCAGCACGGAGTTTGACTGGGGTGATGAGACGTCGAGGGACAGTGAGGCCAGCAGTGTGGCGGCTCGTGGAG ACTCACGGCCACGCCTGGTGGCCCCTGCTGACTTGTCACGCTTTGAGTTCGACGAGTGTGAGGCGGCCGTGATGCTGGTGTCGCTGGGCA GCTCGCGCTCAGGCACGCCCTCCTTCTCACCCGTCTCCACTCAATCGCCCTTCTCGCCAGCCCCATCACCCTCACCCTCACCACTCTTCG GCTTCCGCCCTGCCAACTTTAGCCCCATCAATGCCTCACCAGTCATCCAGCGCACTGCAGTCCGCAGTCGCCACCTGAGCGCCAGCACCC CTAAGGCAGGCGTGCTGACGCCACCAGACCTGGGCCCCCACCCACCGCCACCTGCCCCCCGAGAGCGCCACTCCTCTGGAATCCTACCCA CCTTCCAGACCAACCTGACCTTCACCGTGCCCATCAGCCCTGGGCGACGGAAGACAGAGCTGTTGCCGCATCCAGGGGCCTTGGGGGCCC CTGGCGCAGGGGGTGGAGGAGCCGCCCCAGACTTTCCCAAGAGTGACAGCTTAGACTCTGGTGTGGACTCAGTGTCCCACACACCTACAC CCTCCACGCCGGCTGGCTTCCGGGCCGTGTCCCCTGCTGTGCCCTTCTCTCGCTCCCGCCAGCCCTCACCATTGCTGCTGTTGCCACCCC CTGCCGGCCTGACCTCGGATCCAGGGCCCTCTGTGCGCAGGGTGCCTGCTGTGCAGCGGGACTCACCTGTTATTGTCCGCAACCCTGATG TGCCACTGCCCTCCAAATTCCCTGGGGAGGTGGGCACTGCTGGTGAGGTGCGGGCTGGGGGACCTGGGCGGGGCTGCCGTGAAACCCCAG TGCCCCCTGGGGTGGCCAGTGGGAAGCCTGGCCTGCCCCCACCTCTGCCAGCCCCCGTGCCCATCACCGTGCCTCCAGCTGCACCAACTG CCGTGGCCCAGCCGATGCCCGCCTTTGGCCTGGCTTCTTCACCCTTTCAGCCTGTGGCCTTCCACCCCTCACCTGCTGCCCTGTTGCCCG TTTTGGTGCCCAGCAGCTATACCAGCCACCCTGCCCCCAAGAAGGAAGTCATCATGGGCCGGCCTGGAACAGTGTGGACGAATGTGGAAC CTCGCTCTGTGGCTGTGTTCCCTTGGCACTCCTTAGTCCCCTTCCTGGCACCCAGCCAGCCTGACCCCTCCGTGCAGCCGAGCGAGGCCC AGCAACCTGCCAGCCACCCAGTGGCCTCCAACCAGAGCAAAGAACCTGCTGAGTCGGCAGCTGTTGCTCATGAACGGCCACCAGGTGGGA CAGGGAGTGCTGACCCTGAGCGGCCCCCTGGAGCCACATGCCCTGAGAGCCCAGGACCCGGACCCCCACACCCTTTGGGGGTGGTGGAAT CTGGTAAGGGTCCGCCTCCCACCACGGAGGAGGAGGCCTCCGGCCCCCCAGGAGAGCCCCGGCTGGACAGTGAGACAGAGAGTGACCATG ATGATGCAAGGCAAGAAGAAAGAGCTTCGAGAACAACATCCCAGTCTGAGAGATGAGGGGACTAGTGATGACAAGGTCTTCCTTGCATGC AGAGGGGCCGGCCAGTGCCCCCTATCTGCCCCAGCTGGGACTATGGACAGGACCCGGGTGCTTCAAGCATCCCAGGCTGGGCCACCCTTT TTTTGCTACACCTGTGGCAAATGTTTCAGCAGGCGCTCCTACCTCTATAGCCACCAGTTTGTTCACAATCCCAAGCTGACTAACAGCTGC AGTCAGTGTGGGAAGTTGTTTCGGAGCCCCAAGTCCCTCAGCTATCACAGACGCATGCATCTTGGGGAGAGGCCCTTCTGTTGCACGCTC TGTGACAAGACCTACTGTGATGCTTCTGGACTAAGTCGTCACCGCCGCGTCCATCTGGGTTACCGGCCCCATTCATGCTCTGTGTGTGGG AAGAGCTTCCGGGACCAGTCTGAGCTCAAACGCCACCAGAAGATACACCAAAACCAGGAGCCAGTGGATGGAAACCAGGAGTGTACTTTG AGGATTCCAGGCACCCAGGCTGAATTCCAGACACCCATCGCCAGAAGCCAGAGGTCCATCCAGGGGCTTTTGGATGTGAACCATGCACCA GTGGCCAGGTCCCAGGAACCCATATTTAGAACTGAGGGTCCTATGGCCCAGAACCAGGCATCTGTACTTAAGAACCAAGCACCTGTGACC AGGACCCAGGCACCCATCACTGGAACCCTCTGTCAGGATGCCAGATCCAACTCTCATCCAGTGAAGCCCTCAAGACTCAATGTCTTCTGT TGCCCCCATTGTTCTTTGACTTTTAGCAAGAAATCCTATCTCTCCAGACACCAGAAGGCCCACCTCACAGAGCCGCCCAACTACTGCTTC CATTGCAGCAAGTCTTTCAGCTCATTTTCCAGGCTGGTCAGACACCAGCAGACCCACTGGAAGCAGAAGAGCTACCTTTGCCCTATCTGT GACCTCTCCTTTGGGGAGAAAGAGGGCCTTATGGATCACTGGAGGGGCTATAAAGGCAAGGACCTGTGCCAGAGCAGCCACCATAAATGC CGGGTGATCCTGGGCCAGTGGCTTGGCTTCTCTCATGATGTCCCCACTATGGCTGGGGAGGAATGGAAGCATGGAGGTGATCAATCTCCC CCCAGGATCCATACCCCCAGGAGAAGAGGCCTAAGAGAGAAGGCCTGCAAAGGAGACAAAACAAAGGAGGCAGTGAGCATCTTGAAACAT >In-frame_ENST00000572681_ENST00000376883_TCGA-BH-A1F0-01A_CIC_chr19_42791392_+_ZFP57_chr6_29641535_length(amino acids)=1075AA_start in transcript=68_stop in transcript=3295 MKPMKKACTGLSGPGSGSKSPPATRAKALRRRGAGEGDKPEEEDDEAQQPQPQSGPEEAEEGEEEEAERGPGAEGPPLELHPGDPAPGPA EDPKGDGEAGRWEPSLSRKTATFKSRAPKKKYVEEHGAGSSGVAGAPEERVRTPEEASGLGVPPRPPTSTRSSSTDTASEHSADLEDEPA EACGPGPWPPGSTSGSYDLRQLRSQRVLARRGDGLFLPAVVRQVRRSQDLGVQFPGDRALTFYEGVPGAGVDVVLDATPPPGALVVGTAV CTCVEPGVAAYREGVVVEVATKPAAYKVRLSPGPSSQPGLPGSLPQPPQPLHREPEEAVWVARSSLRLLRPPWEPETMLRKPPTGPEEEQ AEPGATLPPCPAALDPKQPEDAEVSKISFGGNLGTHCEEGEEKHPPALGTPALLPLPPPQLLSPPPKSPAFVGPGRPGEQPSPCQEGSQG GSRSSSVASLEKGTAPAARARTPLTAAQQKYKKGDVVCTPSGIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEMEGLADSGP GGAGRPAAVAAREGSTEFDWGDETSRDSEASSVAARGDSRPRLVAPADLSRFEFDECEAAVMLVSLGSSRSGTPSFSPVSTQSPFSPAPS PSPSPLFGFRPANFSPINASPVIQRTAVRSRHLSASTPKAGVLTPPDLGPHPPPPAPRERHSSGILPTFQTNLTFTVPISPGRRKTELLP HPGALGAPGAGGGGAAPDFPKSDSLDSGVDSVSHTPTPSTPAGFRAVSPAVPFSRSRQPSPLLLLPPPAGLTSDPGPSVRRVPAVQRDSP VIVRNPDVPLPSKFPGEVGTAGEVRAGGPGRGCRETPVPPGVASGKPGLPPPLPAPVPITVPPAAPTAVAQPMPAFGLASSPFQPVAFHP SPAALLPVLVPSSYTSHPAPKKEVIMGRPGTVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQPSEAQQPASHPVASNQSKEPAESAAVA -------------------------------------------------------------- >In-frame_ENST00000160740_ENST00000376881_TCGA-BH-A1F0-01A_CIC_chr19_42791392_+_ZFP57_chr6_29641535_length(transcript)=2504nt_BP=1137nt GGGGGAGGCGCGGCGGGGGGAGGGGAGCGCGTAGTAGTGGCGGGGCGGGGAGGCGGTGGTGGTTCGGCGCGGGGCTCGCTCGGAGCGCAC GGACGCACGCACGCTGGTCCGTCTGCCCGCCCGGGGCCGGAGGTCGACCCGGCGCTGAGCCTCGGGCCCGGGGCCCGGAAAGGCGGGGCG GCGGCGCCGGCAGCCGGGACGCGCGGGGCCAGAGCCGTTACCCGCCGGAGCTGCGAGGGAGGGAGGGAACGAGCGAGCCAGCGAGCGGGG AAGGGAGGGGGCCGCCCCCGCGCACGCGCGTCGCGCCCCGCCCCGCCTGCCCCGCCTGCCCCGCCCGCCGGACTCCGCGAGGGAGGAGGG AGAGGGAGGGGGCGGTGCCGATGGCCCCCGTGCCGCGCGCCCCGTGACGGCCCCCGCGCGCGCCGGGGGGCGGGGCGGGGCCGGTGCGCG CTGACCTCCCCCGCCCCCCGGGCGGCGGGAGGCAGGCGGCGCTGTGCGCAGGCGCGCCCGGCAGAGACCCCCGCGTGGGGCGGCCGGAGG GGGGCGGCGGGGGGGGGGGCATGCGGCGACGGCCTCCCGCTCCCCCCGGGCCCAAGCGGCGACGGCCGAGGAGCGGGCTGCGGGCGGAGC GGCGTCGGCCGCTGAGGAGGTGCGAGCCCCTGCCGGGTCCCCCCTGCGCCGGACCATGTATTCGGCCCACAGGCCCCTGATGCCCGCGTC CAGCGCGGCCTCCCGTGGCCTCGGCATGTTCGTGTGGACGAATGTGGAACCTCGCTCTGTGGCTGTGTTCCCTTGGCACTCCTTAGTCCC CTTCCTGGCACCCAGCCAGCCTGACCCCTCCGTGCAGCCGAGCGAGGCCCAGCAACCTGCCAGCCACCCAGTGGCCTCCAACCAGAGCAA AGAACCTGCTGAGTCGGCAGCTGTTGCTCATGAACGGCCACCAGGTGGGACAGGGAGTGCTGACCCTGAGCGGCCCCCTGGAGCCACATG CCCTGAGAGCCCAGGACCCGGACCCCCACACCCTTTGGGGGTGGTGGAATCTGGTAAGGGTCCGCCTCCCACCACGGAGGAGGAGGCCTC CGGCCCCCCAGGAGAGCCCCGGCTGGACAGTGAGACAGAGAGTGACCATGATGATGCAAGGCAAGAAGAAAGAGCTTCGAGAACAACATC CCAGTCTGAGAGATGAGGGGACTAGTGATGACAAGGTCTTCCTTGCATGCAGAGGGGCCGGCCAGTGCCCCCTATCTGCCCCAGCTGGGA CTATGGACAGGACCCGGGTGCTTCAAGCATCCCAGGCTGGGCCACCCTTTTTTTGCTACACCTGTGGCAAATGTTTCAGCAGGCGCTCCT ACCTCTATAGCCACCAGTTTGTTCACAATCCCAAGCTGACTAACAGCTGCAGTCAGTGTGGGAAGTTGTTTCGGAGCCCCAAGTCCCTCA GCTATCACAGACGCATGCATCTTGGGGAGAGGCCCTTCTGTTGCACGCTCTGTGACAAGACCTACTGTGATGCTTCTGGACTAAGTCGTC ACCGCCGCGTCCATCTGGGTTACCGGCCCCATTCATGCTCTGTGTGTGGGAAGAGCTTCCGGGACCAGTCTGAGCTCAAACGCCACCAGA AGATACACCAAAACCAGGAGCCAGTGGATGGAAACCAGGAGTGTACTTTGAGGATTCCAGGCACCCAGGCTGAATTCCAGACACCCATCG CCAGAAGCCAGAGGTCCATCCAGGGGCTTTTGGATGTGAACCATGCACCAGTGGCCAGGTCCCAGGAACCCATATTTAGAACTGAGGGTC CTATGGCCCAGAACCAGGCATCTGTACTTAAGAACCAAGCACCTGTGACCAGGACCCAGGCACCCATCACTGGAACCCTCTGTCAGGATG CCAGATCCAACTCTCATCCAGTGAAGCCCTCAAGACTCAATGTCTTCTGTTGCCCCCATTGTTCTTTGACTTTTAGCAAGAAATCCTATC TCTCCAGACACCAGAAGGCCCACCTCACAGAGCCGCCCAACTACTGCTTCCATTGCAGCAAGTCTTTCAGCTCATTTTCCAGGCTGGTCA GACACCAGCAGACCCACTGGAAGCAGAAGAGCTACCTTTGCCCTATCTGTGACCTCTCCTTTGGGGAGAAAGAGGGCCTTATGGATCACT GGAGGGGCTATAAAGGCAAGGACCTGTGCCAGAGCAGCCACCATAAATGCCGGGTGATCCTGGGCCAGTGGCTTGGCTTCTCTCATGATG TCCCCACTATGGCTGGGGAGGAATGGAAGCATGGAGGTGATCAATCTCCCCCCAGGATCCATACCCCCAGGAGAAGAGGCCTAAGAGAGA AGGCCTGCAAAGGAGACAAAACAAAGGAGGCAGTGAGCATCTTGAAACATAAATAAATGGCCTTTCTGACTGAGCTCTTTCTTTGTGTTT >In-frame_ENST00000160740_ENST00000376881_TCGA-BH-A1F0-01A_CIC_chr19_42791392_+_ZFP57_chr6_29641535_length(amino acids)=521AA_start in transcript=830_stop in transcript=2395 MTPPCSRARPSNLPATQWPPTRAKNLLSRQLLLMNGHQVGQGVLTLSGPLEPHALRAQDPDPHTLWGWWNLVRVRLPPRRRRPPAPQESP GWTVRQRVTMMMQGKKKELREQHPSLRDEGTSDDKVFLACRGAGQCPLSAPAGTMDRTRVLQASQAGPPFFCYTCGKCFSRRSYLYSHQF VHNPKLTNSCSQCGKLFRSPKSLSYHRRMHLGERPFCCTLCDKTYCDASGLSRHRRVHLGYRPHSCSVCGKSFRDQSELKRHQKIHQNQE PVDGNQECTLRIPGTQAEFQTPIARSQRSIQGLLDVNHAPVARSQEPIFRTEGPMAQNQASVLKNQAPVTRTQAPITGTLCQDARSNSHP VKPSRLNVFCCPHCSLTFSKKSYLSRHQKAHLTEPPNYCFHCSKSFSSFSRLVRHQQTHWKQKSYLCPICDLSFGEKEGLMDHWRGYKGK -------------------------------------------------------------- >In-frame_ENST00000160740_ENST00000376883_TCGA-BH-A1F0-01A_CIC_chr19_42791392_+_ZFP57_chr6_29641535_length(transcript)=2413nt_BP=1137nt GGGGGAGGCGCGGCGGGGGGAGGGGAGCGCGTAGTAGTGGCGGGGCGGGGAGGCGGTGGTGGTTCGGCGCGGGGCTCGCTCGGAGCGCAC GGACGCACGCACGCTGGTCCGTCTGCCCGCCCGGGGCCGGAGGTCGACCCGGCGCTGAGCCTCGGGCCCGGGGCCCGGAAAGGCGGGGCG GCGGCGCCGGCAGCCGGGACGCGCGGGGCCAGAGCCGTTACCCGCCGGAGCTGCGAGGGAGGGAGGGAACGAGCGAGCCAGCGAGCGGGG AAGGGAGGGGGCCGCCCCCGCGCACGCGCGTCGCGCCCCGCCCCGCCTGCCCCGCCTGCCCCGCCCGCCGGACTCCGCGAGGGAGGAGGG AGAGGGAGGGGGCGGTGCCGATGGCCCCCGTGCCGCGCGCCCCGTGACGGCCCCCGCGCGCGCCGGGGGGCGGGGCGGGGCCGGTGCGCG CTGACCTCCCCCGCCCCCCGGGCGGCGGGAGGCAGGCGGCGCTGTGCGCAGGCGCGCCCGGCAGAGACCCCCGCGTGGGGCGGCCGGAGG GGGGCGGCGGGGGGGGGGGCATGCGGCGACGGCCTCCCGCTCCCCCCGGGCCCAAGCGGCGACGGCCGAGGAGCGGGCTGCGGGCGGAGC GGCGTCGGCCGCTGAGGAGGTGCGAGCCCCTGCCGGGTCCCCCCTGCGCCGGACCATGTATTCGGCCCACAGGCCCCTGATGCCCGCGTC CAGCGCGGCCTCCCGTGGCCTCGGCATGTTCGTGTGGACGAATGTGGAACCTCGCTCTGTGGCTGTGTTCCCTTGGCACTCCTTAGTCCC CTTCCTGGCACCCAGCCAGCCTGACCCCTCCGTGCAGCCGAGCGAGGCCCAGCAACCTGCCAGCCACCCAGTGGCCTCCAACCAGAGCAA AGAACCTGCTGAGTCGGCAGCTGTTGCTCATGAACGGCCACCAGGTGGGACAGGGAGTGCTGACCCTGAGCGGCCCCCTGGAGCCACATG CCCTGAGAGCCCAGGACCCGGACCCCCACACCCTTTGGGGGTGGTGGAATCTGGTAAGGGTCCGCCTCCCACCACGGAGGAGGAGGCCTC CGGCCCCCCAGGAGAGCCCCGGCTGGACAGTGAGACAGAGAGTGACCATGATGATGCAAGGCAAGAAGAAAGAGCTTCGAGAACAACATC CCAGTCTGAGAGATGAGGGGACTAGTGATGACAAGGTCTTCCTTGCATGCAGAGGGGCCGGCCAGTGCCCCCTATCTGCCCCAGCTGGGA CTATGGACAGGACCCGGGTGCTTCAAGCATCCCAGGCTGGGCCACCCTTTTTTTGCTACACCTGTGGCAAATGTTTCAGCAGGCGCTCCT ACCTCTATAGCCACCAGTTTGTTCACAATCCCAAGCTGACTAACAGCTGCAGTCAGTGTGGGAAGTTGTTTCGGAGCCCCAAGTCCCTCA GCTATCACAGACGCATGCATCTTGGGGAGAGGCCCTTCTGTTGCACGCTCTGTGACAAGACCTACTGTGATGCTTCTGGACTAAGTCGTC ACCGCCGCGTCCATCTGGGTTACCGGCCCCATTCATGCTCTGTGTGTGGGAAGAGCTTCCGGGACCAGTCTGAGCTCAAACGCCACCAGA AGATACACCAAAACCAGGAGCCAGTGGATGGAAACCAGGAGTGTACTTTGAGGATTCCAGGCACCCAGGCTGAATTCCAGACACCCATCG CCAGAAGCCAGAGGTCCATCCAGGGGCTTTTGGATGTGAACCATGCACCAGTGGCCAGGTCCCAGGAACCCATATTTAGAACTGAGGGTC CTATGGCCCAGAACCAGGCATCTGTACTTAAGAACCAAGCACCTGTGACCAGGACCCAGGCACCCATCACTGGAACCCTCTGTCAGGATG CCAGATCCAACTCTCATCCAGTGAAGCCCTCAAGACTCAATGTCTTCTGTTGCCCCCATTGTTCTTTGACTTTTAGCAAGAAATCCTATC TCTCCAGACACCAGAAGGCCCACCTCACAGAGCCGCCCAACTACTGCTTCCATTGCAGCAAGTCTTTCAGCTCATTTTCCAGGCTGGTCA GACACCAGCAGACCCACTGGAAGCAGAAGAGCTACCTTTGCCCTATCTGTGACCTCTCCTTTGGGGAGAAAGAGGGCCTTATGGATCACT GGAGGGGCTATAAAGGCAAGGACCTGTGCCAGAGCAGCCACCATAAATGCCGGGTGATCCTGGGCCAGTGGCTTGGCTTCTCTCATGATG TCCCCACTATGGCTGGGGAGGAATGGAAGCATGGAGGTGATCAATCTCCCCCCAGGATCCATACCCCCAGGAGAAGAGGCCTAAGAGAGA >In-frame_ENST00000160740_ENST00000376883_TCGA-BH-A1F0-01A_CIC_chr19_42791392_+_ZFP57_chr6_29641535_length(amino acids)=521AA_start in transcript=830_stop in transcript=2395 MTPPCSRARPSNLPATQWPPTRAKNLLSRQLLLMNGHQVGQGVLTLSGPLEPHALRAQDPDPHTLWGWWNLVRVRLPPRRRRPPAPQESP GWTVRQRVTMMMQGKKKELREQHPSLRDEGTSDDKVFLACRGAGQCPLSAPAGTMDRTRVLQASQAGPPFFCYTCGKCFSRRSYLYSHQF VHNPKLTNSCSQCGKLFRSPKSLSYHRRMHLGERPFCCTLCDKTYCDASGLSRHRRVHLGYRPHSCSVCGKSFRDQSELKRHQKIHQNQE PVDGNQECTLRIPGTQAEFQTPIARSQRSIQGLLDVNHAPVARSQEPIFRTEGPMAQNQASVLKNQAPVTRTQAPITGTLCQDARSNSHP VKPSRLNVFCCPHCSLTFSKKSYLSRHQKAHLTEPPNYCFHCSKSFSSFSRLVRHQQTHWKQKSYLCPICDLSFGEKEGLMDHWRGYKGK -------------------------------------------------------------- >In-frame_ENST00000575354_ENST00000376881_TCGA-BH-A1F0-01A_CIC_chr19_42791392_+_ZFP57_chr6_29641535_length(transcript)=1859nt_BP=492nt GGAGGTGCGAGCCCCTGCCGGGTCCCCCCTGCGCCGGACCATGTATTCGGCCCACAGGCCCCTGATGCCCGCGTCCAGCGCGGCCTCCCG TGGCCTCGGCATGTTCGTGTGGACGAATGTGGAACCTCGCTCTGTGGCTGTGTTCCCTTGGCACTCCTTAGTCCCCTTCCTGGCACCCAG CCAGCCTGACCCCTCCGTGCAGCCGAGCGAGGCCCAGCAACCTGCCAGCCACCCAGTGGCCTCCAACCAGAGCAAAGAACCTGCTGAGTC GGCAGCTGTTGCTCATGAACGGCCACCAGGTGGGACAGGGAGTGCTGACCCTGAGCGGCCCCCTGGAGCCACATGCCCTGAGAGCCCAGG ACCCGGACCCCCACACCCTTTGGGGGTGGTGGAATCTGGTAAGGGTCCGCCTCCCACCACGGAGGAGGAGGCCTCCGGCCCCCCAGGAGA GCCCCGGCTGGACAGTGAGACAGAGAGTGACCATGATGATGCAAGGCAAGAAGAAAGAGCTTCGAGAACAACATCCCAGTCTGAGAGATG AGGGGACTAGTGATGACAAGGTCTTCCTTGCATGCAGAGGGGCCGGCCAGTGCCCCCTATCTGCCCCAGCTGGGACTATGGACAGGACCC GGGTGCTTCAAGCATCCCAGGCTGGGCCACCCTTTTTTTGCTACACCTGTGGCAAATGTTTCAGCAGGCGCTCCTACCTCTATAGCCACC AGTTTGTTCACAATCCCAAGCTGACTAACAGCTGCAGTCAGTGTGGGAAGTTGTTTCGGAGCCCCAAGTCCCTCAGCTATCACAGACGCA TGCATCTTGGGGAGAGGCCCTTCTGTTGCACGCTCTGTGACAAGACCTACTGTGATGCTTCTGGACTAAGTCGTCACCGCCGCGTCCATC TGGGTTACCGGCCCCATTCATGCTCTGTGTGTGGGAAGAGCTTCCGGGACCAGTCTGAGCTCAAACGCCACCAGAAGATACACCAAAACC AGGAGCCAGTGGATGGAAACCAGGAGTGTACTTTGAGGATTCCAGGCACCCAGGCTGAATTCCAGACACCCATCGCCAGAAGCCAGAGGT CCATCCAGGGGCTTTTGGATGTGAACCATGCACCAGTGGCCAGGTCCCAGGAACCCATATTTAGAACTGAGGGTCCTATGGCCCAGAACC AGGCATCTGTACTTAAGAACCAAGCACCTGTGACCAGGACCCAGGCACCCATCACTGGAACCCTCTGTCAGGATGCCAGATCCAACTCTC ATCCAGTGAAGCCCTCAAGACTCAATGTCTTCTGTTGCCCCCATTGTTCTTTGACTTTTAGCAAGAAATCCTATCTCTCCAGACACCAGA AGGCCCACCTCACAGAGCCGCCCAACTACTGCTTCCATTGCAGCAAGTCTTTCAGCTCATTTTCCAGGCTGGTCAGACACCAGCAGACCC ACTGGAAGCAGAAGAGCTACCTTTGCCCTATCTGTGACCTCTCCTTTGGGGAGAAAGAGGGCCTTATGGATCACTGGAGGGGCTATAAAG GCAAGGACCTGTGCCAGAGCAGCCACCATAAATGCCGGGTGATCCTGGGCCAGTGGCTTGGCTTCTCTCATGATGTCCCCACTATGGCTG GGGAGGAATGGAAGCATGGAGGTGATCAATCTCCCCCCAGGATCCATACCCCCAGGAGAAGAGGCCTAAGAGAGAAGGCCTGCAAAGGAG ACAAAACAAAGGAGGCAGTGAGCATCTTGAAACATAAATAAATGGCCTTTCTGACTGAGCTCTTTCTTTGTGTTTAGTTTTCCTGAGGAC >In-frame_ENST00000575354_ENST00000376881_TCGA-BH-A1F0-01A_CIC_chr19_42791392_+_ZFP57_chr6_29641535_length(amino acids)=521AA_start in transcript=185_stop in transcript=1750 MTPPCSRARPSNLPATQWPPTRAKNLLSRQLLLMNGHQVGQGVLTLSGPLEPHALRAQDPDPHTLWGWWNLVRVRLPPRRRRPPAPQESP GWTVRQRVTMMMQGKKKELREQHPSLRDEGTSDDKVFLACRGAGQCPLSAPAGTMDRTRVLQASQAGPPFFCYTCGKCFSRRSYLYSHQF VHNPKLTNSCSQCGKLFRSPKSLSYHRRMHLGERPFCCTLCDKTYCDASGLSRHRRVHLGYRPHSCSVCGKSFRDQSELKRHQKIHQNQE PVDGNQECTLRIPGTQAEFQTPIARSQRSIQGLLDVNHAPVARSQEPIFRTEGPMAQNQASVLKNQAPVTRTQAPITGTLCQDARSNSHP VKPSRLNVFCCPHCSLTFSKKSYLSRHQKAHLTEPPNYCFHCSKSFSSFSRLVRHQQTHWKQKSYLCPICDLSFGEKEGLMDHWRGYKGK -------------------------------------------------------------- >In-frame_ENST00000575354_ENST00000376883_TCGA-BH-A1F0-01A_CIC_chr19_42791392_+_ZFP57_chr6_29641535_length(transcript)=1768nt_BP=492nt GGAGGTGCGAGCCCCTGCCGGGTCCCCCCTGCGCCGGACCATGTATTCGGCCCACAGGCCCCTGATGCCCGCGTCCAGCGCGGCCTCCCG TGGCCTCGGCATGTTCGTGTGGACGAATGTGGAACCTCGCTCTGTGGCTGTGTTCCCTTGGCACTCCTTAGTCCCCTTCCTGGCACCCAG CCAGCCTGACCCCTCCGTGCAGCCGAGCGAGGCCCAGCAACCTGCCAGCCACCCAGTGGCCTCCAACCAGAGCAAAGAACCTGCTGAGTC GGCAGCTGTTGCTCATGAACGGCCACCAGGTGGGACAGGGAGTGCTGACCCTGAGCGGCCCCCTGGAGCCACATGCCCTGAGAGCCCAGG ACCCGGACCCCCACACCCTTTGGGGGTGGTGGAATCTGGTAAGGGTCCGCCTCCCACCACGGAGGAGGAGGCCTCCGGCCCCCCAGGAGA GCCCCGGCTGGACAGTGAGACAGAGAGTGACCATGATGATGCAAGGCAAGAAGAAAGAGCTTCGAGAACAACATCCCAGTCTGAGAGATG AGGGGACTAGTGATGACAAGGTCTTCCTTGCATGCAGAGGGGCCGGCCAGTGCCCCCTATCTGCCCCAGCTGGGACTATGGACAGGACCC GGGTGCTTCAAGCATCCCAGGCTGGGCCACCCTTTTTTTGCTACACCTGTGGCAAATGTTTCAGCAGGCGCTCCTACCTCTATAGCCACC AGTTTGTTCACAATCCCAAGCTGACTAACAGCTGCAGTCAGTGTGGGAAGTTGTTTCGGAGCCCCAAGTCCCTCAGCTATCACAGACGCA TGCATCTTGGGGAGAGGCCCTTCTGTTGCACGCTCTGTGACAAGACCTACTGTGATGCTTCTGGACTAAGTCGTCACCGCCGCGTCCATC TGGGTTACCGGCCCCATTCATGCTCTGTGTGTGGGAAGAGCTTCCGGGACCAGTCTGAGCTCAAACGCCACCAGAAGATACACCAAAACC AGGAGCCAGTGGATGGAAACCAGGAGTGTACTTTGAGGATTCCAGGCACCCAGGCTGAATTCCAGACACCCATCGCCAGAAGCCAGAGGT CCATCCAGGGGCTTTTGGATGTGAACCATGCACCAGTGGCCAGGTCCCAGGAACCCATATTTAGAACTGAGGGTCCTATGGCCCAGAACC AGGCATCTGTACTTAAGAACCAAGCACCTGTGACCAGGACCCAGGCACCCATCACTGGAACCCTCTGTCAGGATGCCAGATCCAACTCTC ATCCAGTGAAGCCCTCAAGACTCAATGTCTTCTGTTGCCCCCATTGTTCTTTGACTTTTAGCAAGAAATCCTATCTCTCCAGACACCAGA AGGCCCACCTCACAGAGCCGCCCAACTACTGCTTCCATTGCAGCAAGTCTTTCAGCTCATTTTCCAGGCTGGTCAGACACCAGCAGACCC ACTGGAAGCAGAAGAGCTACCTTTGCCCTATCTGTGACCTCTCCTTTGGGGAGAAAGAGGGCCTTATGGATCACTGGAGGGGCTATAAAG GCAAGGACCTGTGCCAGAGCAGCCACCATAAATGCCGGGTGATCCTGGGCCAGTGGCTTGGCTTCTCTCATGATGTCCCCACTATGGCTG GGGAGGAATGGAAGCATGGAGGTGATCAATCTCCCCCCAGGATCCATACCCCCAGGAGAAGAGGCCTAAGAGAGAAGGCCTGCAAAGGAG >In-frame_ENST00000575354_ENST00000376883_TCGA-BH-A1F0-01A_CIC_chr19_42791392_+_ZFP57_chr6_29641535_length(amino acids)=521AA_start in transcript=185_stop in transcript=1750 MTPPCSRARPSNLPATQWPPTRAKNLLSRQLLLMNGHQVGQGVLTLSGPLEPHALRAQDPDPHTLWGWWNLVRVRLPPRRRRPPAPQESP GWTVRQRVTMMMQGKKKELREQHPSLRDEGTSDDKVFLACRGAGQCPLSAPAGTMDRTRVLQASQAGPPFFCYTCGKCFSRRSYLYSHQF VHNPKLTNSCSQCGKLFRSPKSLSYHRRMHLGERPFCCTLCDKTYCDASGLSRHRRVHLGYRPHSCSVCGKSFRDQSELKRHQKIHQNQE PVDGNQECTLRIPGTQAEFQTPIARSQRSIQGLLDVNHAPVARSQEPIFRTEGPMAQNQASVLKNQAPVTRTQAPITGTLCQDARSNSHP VKPSRLNVFCCPHCSLTFSKKSYLSRHQKAHLTEPPNYCFHCSKSFSSFSRLVRHQQTHWKQKSYLCPICDLSFGEKEGLMDHWRGYKGK -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for CIC-ZFP57 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
Hgene | CIC | chr19:42791392 | chr6:29641535 | ENST00000575354 | + | 3 | 20 | 28_46 | 150.66666666666666 | 1609.0 | ATXN1 |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for CIC-ZFP57 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for CIC-ZFP57 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | CIC | C4539848 | MENTAL RETARDATION, AUTOSOMAL DOMINANT 45 | 3 | GENOMICS_ENGLAND;UNIPROT |
Hgene | CIC | C0020796 | Profound Mental Retardation | 2 | CTD_human |
Hgene | CIC | C0025363 | Mental Retardation, Psychosocial | 2 | CTD_human |
Hgene | CIC | C0917816 | Mental deficiency | 2 | CTD_human |
Hgene | CIC | C3714756 | Intellectual Disability | 2 | CTD_human |
Hgene | CIC | C0027627 | Neoplasm Metastasis | 1 | CTD_human |
Hgene | CIC | C0041671 | Attention Deficit Disorder | 1 | CTD_human |
Hgene | CIC | C0087012 | Ataxia, Spinocerebellar | 1 | CTD_human |
Hgene | CIC | C0752120 | Spinocerebellar Ataxia Type 1 | 1 | CTD_human |
Hgene | CIC | C0752121 | Spinocerebellar Ataxia Type 2 | 1 | CTD_human |
Hgene | CIC | C0752122 | Spinocerebellar Ataxia Type 4 | 1 | CTD_human |
Hgene | CIC | C0752123 | Spinocerebellar Ataxia Type 5 | 1 | CTD_human |
Hgene | CIC | C0752124 | Spinocerebellar Ataxia Type 6 (disorder) | 1 | CTD_human |
Hgene | CIC | C0752125 | Spinocerebellar Ataxia Type 7 | 1 | CTD_human |
Hgene | CIC | C1263846 | Attention deficit hyperactivity disorder | 1 | CTD_human |
Hgene | CIC | C1321905 | Minimal Brain Dysfunction | 1 | CTD_human |
Hgene | CIC | C1510586 | Autism Spectrum Disorders | 1 | CTD_human |
Tgene | ZFP57 | C1832386 | Diabetes Mellitus, Transient Neonatal, 1 | 4 | CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT |
Tgene | ZFP57 | C0011849 | Diabetes Mellitus | 1 | CTD_human |