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 | Fusion Gene Summary |
| Fusion Gene ORF analysis |
| Fusion Genomic Features |
| Fusion Protein Features |
| Fusion Gene Sequence |
| Fusion Gene PPI analysis |
| Related Drugs |
| Related Diseases |
Fusion gene:CLNS1A-DCBLD1 (FusionGDB2 ID:17280) |
Fusion Gene Summary for CLNS1A-DCBLD1 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: CLNS1A-DCBLD1 | Fusion gene ID: 17280 | Hgene | Tgene | Gene symbol | CLNS1A | DCBLD1 | Gene ID | 1207 | 285761 |
| Gene name | chloride nucleotide-sensitive channel 1A | discoidin, CUB and LCCL domain containing 1 | |
| Synonyms | CLCI|CLNS1B|ICln | dJ94G16.1 | |
| Cytomap | 11q14.1 | 6q22.1 | |
| Type of gene | protein-coding | protein-coding | |
| Description | methylosome subunit pIClnchloride channel regulatory proteinchloride channel, nucleotide sensitive 1Achloride conductance regulatory protein IClnchloride ion current inducer proteini(Cln)reticulocyte pIClnreticulocyte protein ICln | discoidin, CUB and LCCL domain-containing protein 1 | |
| Modification date | 20200313 | 20200313 | |
| UniProtAcc | P54105 | Q8N8Z6 | |
| Ensembl transtripts involved in fusion gene | ENST00000525428, ENST00000263309, ENST00000525064, ENST00000532069, ENST00000528364, ENST00000533957, | ENST00000368503, ENST00000296955, ENST00000338728, ENST00000534777, | |
| Fusion gene scores | * DoF score | 13 X 12 X 5=780 | 6 X 5 X 6=180 |
| # samples | 16 | 6 | |
| ** MAII score | log2(16/780*10)=-2.28540221886225 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(6/180*10)=-1.58496250072116 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: CLNS1A [Title/Abstract] AND DCBLD1 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint | CLNS1A(77348635)-DCBLD1(117853423), # samples:1 | ||
| Anticipated loss of major functional domain due to fusion event. | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | CLNS1A | GO:0000387 | spliceosomal snRNP assembly | 18984161 |
| Fusion gene breakpoints across CLNS1A (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
| Fusion gene breakpoints across DCBLD1 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
| Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB4 | HNSC | TCGA-CV-6933-01A | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + |
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Fusion Gene ORF analysis for CLNS1A-DCBLD1 |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000525428 | ENST00000368503 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + |
| In-frame | ENST00000525428 | ENST00000296955 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + |
| In-frame | ENST00000525428 | ENST00000338728 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + |
| 5CDS-intron | ENST00000525428 | ENST00000534777 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + |
| In-frame | ENST00000263309 | ENST00000368503 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + |
| In-frame | ENST00000263309 | ENST00000296955 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + |
| In-frame | ENST00000263309 | ENST00000338728 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + |
| 5CDS-intron | ENST00000263309 | ENST00000534777 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + |
| In-frame | ENST00000525064 | ENST00000368503 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + |
| In-frame | ENST00000525064 | ENST00000296955 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + |
| In-frame | ENST00000525064 | ENST00000338728 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + |
| 5CDS-intron | ENST00000525064 | ENST00000534777 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + |
| In-frame | ENST00000532069 | ENST00000368503 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + |
| In-frame | ENST00000532069 | ENST00000296955 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + |
| In-frame | ENST00000532069 | ENST00000338728 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + |
| 5CDS-intron | ENST00000532069 | ENST00000534777 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + |
| In-frame | ENST00000528364 | ENST00000368503 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + |
| In-frame | ENST00000528364 | ENST00000296955 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + |
| In-frame | ENST00000528364 | ENST00000338728 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + |
| 5CDS-intron | ENST00000528364 | ENST00000534777 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + |
| intron-3CDS | ENST00000533957 | ENST00000368503 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + |
| intron-3CDS | ENST00000533957 | ENST00000296955 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + |
| intron-3CDS | ENST00000533957 | ENST00000338728 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + |
| intron-intron | ENST00000533957 | ENST00000534777 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + |
| ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
| ENST00000525428 | CLNS1A | chr11 | 77348635 | - | ENST00000368503 | DCBLD1 | chr6 | 117853423 | + | 1182 | 216 | 225 | 1181 | 318 |
| ENST00000525428 | CLNS1A | chr11 | 77348635 | - | ENST00000296955 | DCBLD1 | chr6 | 117853423 | + | 1485 | 216 | 225 | 1250 | 341 |
| ENST00000525428 | CLNS1A | chr11 | 77348635 | - | ENST00000338728 | DCBLD1 | chr6 | 117853423 | + | 3137 | 216 | 225 | 1778 | 517 |
| ENST00000263309 | CLNS1A | chr11 | 77348635 | - | ENST00000368503 | DCBLD1 | chr6 | 117853423 | + | 1128 | 162 | 171 | 1127 | 318 |
| ENST00000263309 | CLNS1A | chr11 | 77348635 | - | ENST00000296955 | DCBLD1 | chr6 | 117853423 | + | 1431 | 162 | 171 | 1196 | 341 |
| ENST00000263309 | CLNS1A | chr11 | 77348635 | - | ENST00000338728 | DCBLD1 | chr6 | 117853423 | + | 3083 | 162 | 171 | 1724 | 517 |
| ENST00000525064 | CLNS1A | chr11 | 77348635 | - | ENST00000368503 | DCBLD1 | chr6 | 117853423 | + | 1149 | 183 | 192 | 1148 | 318 |
| ENST00000525064 | CLNS1A | chr11 | 77348635 | - | ENST00000296955 | DCBLD1 | chr6 | 117853423 | + | 1452 | 183 | 192 | 1217 | 341 |
| ENST00000525064 | CLNS1A | chr11 | 77348635 | - | ENST00000338728 | DCBLD1 | chr6 | 117853423 | + | 3104 | 183 | 192 | 1745 | 517 |
| ENST00000532069 | CLNS1A | chr11 | 77348635 | - | ENST00000368503 | DCBLD1 | chr6 | 117853423 | + | 1171 | 205 | 214 | 1170 | 319 |
| ENST00000532069 | CLNS1A | chr11 | 77348635 | - | ENST00000296955 | DCBLD1 | chr6 | 117853423 | + | 1474 | 205 | 214 | 1239 | 341 |
| ENST00000532069 | CLNS1A | chr11 | 77348635 | - | ENST00000338728 | DCBLD1 | chr6 | 117853423 | + | 3126 | 205 | 214 | 1767 | 517 |
| ENST00000528364 | CLNS1A | chr11 | 77348635 | - | ENST00000368503 | DCBLD1 | chr6 | 117853423 | + | 1153 | 187 | 196 | 1152 | 319 |
| ENST00000528364 | CLNS1A | chr11 | 77348635 | - | ENST00000296955 | DCBLD1 | chr6 | 117853423 | + | 1456 | 187 | 196 | 1221 | 341 |
| ENST00000528364 | CLNS1A | chr11 | 77348635 | - | ENST00000338728 | DCBLD1 | chr6 | 117853423 | + | 3108 | 187 | 196 | 1749 | 517 |
| DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
| ENST00000525428 | ENST00000368503 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + | 0.009202102 | 0.9907979 |
| ENST00000525428 | ENST00000296955 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + | 0.002828075 | 0.99717194 |
| ENST00000525428 | ENST00000338728 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + | 0.000789149 | 0.99921083 |
| ENST00000263309 | ENST00000368503 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + | 0.012651143 | 0.9873489 |
| ENST00000263309 | ENST00000296955 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + | 0.004088538 | 0.9959115 |
| ENST00000263309 | ENST00000338728 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + | 0.000835407 | 0.9991646 |
| ENST00000525064 | ENST00000368503 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + | 0.011287068 | 0.9887129 |
| ENST00000525064 | ENST00000296955 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + | 0.003727723 | 0.9962723 |
| ENST00000525064 | ENST00000338728 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + | 0.00085418 | 0.99914575 |
| ENST00000532069 | ENST00000368503 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + | 0.01043421 | 0.98956585 |
| ENST00000532069 | ENST00000296955 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + | 0.003099737 | 0.9969003 |
| ENST00000532069 | ENST00000338728 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + | 0.000803026 | 0.99919695 |
| ENST00000528364 | ENST00000368503 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + | 0.010687459 | 0.9893126 |
| ENST00000528364 | ENST00000296955 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + | 0.003218532 | 0.99678147 |
| ENST00000528364 | ENST00000338728 | CLNS1A | chr11 | 77348635 | - | DCBLD1 | chr6 | 117853423 | + | 0.000831119 | 0.9991689 |
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Fusion Genomic Features for CLNS1A-DCBLD1 |
| FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
| Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
| CLNS1A | chr11 | 77348634 | - | DCBLD1 | chr6 | 117853422 | + | 0.001709656 | 0.99829036 |
| CLNS1A | chr11 | 77348634 | - | DCBLD1 | chr6 | 117853422 | + | 0.001709656 | 0.99829036 |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for CLNS1A-DCBLD1 |
| Go to FGviewer for the breakpoints of chr11:77348635-chr6:117853423 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
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| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| CLNS1A | DCBLD1 |
| FUNCTION: Involved in both the assembly of spliceosomal snRNPs and the methylation of Sm proteins (PubMed:21081503, PubMed:18984161). Chaperone that regulates the assembly of spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs. Most spliceosomal snRNPs contain a common set of Sm proteins SNRPB, SNRPD1, SNRPD2, SNRPD3, SNRPE, SNRPF and SNRPG that assemble in a heptameric protein ring on the Sm site of the small nuclear RNA to form the core snRNP. In the cytosol, the Sm proteins SNRPD1, SNRPD2, SNRPE, SNRPF and SNRPG are trapped in an inactive 6S pICln-Sm complex by the chaperone CLNS1A that controls the assembly of the core snRNP. Dissociation by the SMN complex of CLNS1A from the trapped Sm proteins and their transfer to an SMN-Sm complex triggers the assembly of core snRNPs and their transport to the nucleus. May also indirectly participate in cellular volume control by activation of a swelling-induced chloride conductance pathway. {ECO:0000269|PubMed:10330151, ECO:0000269|PubMed:11713266, ECO:0000269|PubMed:18984161, ECO:0000269|PubMed:21081503}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Tgene | DCBLD1 | chr11:77348635 | chr6:117853423 | ENST00000296955 | 4 | 15 | 482_486 | 195.0 | 540.0 | Compositional bias | Note=Poly-Lys | |
| Tgene | DCBLD1 | chr11:77348635 | chr6:117853423 | ENST00000338728 | 4 | 15 | 482_486 | 195.0 | 716.0 | Compositional bias | Note=Poly-Lys | |
| Tgene | DCBLD1 | chr11:77348635 | chr6:117853423 | ENST00000296955 | 4 | 15 | 248_412 | 195.0 | 540.0 | Domain | F5/8 type C | |
| Tgene | DCBLD1 | chr11:77348635 | chr6:117853423 | ENST00000338728 | 4 | 15 | 248_412 | 195.0 | 716.0 | Domain | F5/8 type C | |
| Tgene | DCBLD1 | chr11:77348635 | chr6:117853423 | ENST00000296955 | 4 | 15 | 481_715 | 195.0 | 540.0 | Topological domain | Cytoplasmic | |
| Tgene | DCBLD1 | chr11:77348635 | chr6:117853423 | ENST00000338728 | 4 | 15 | 481_715 | 195.0 | 716.0 | Topological domain | Cytoplasmic | |
| Tgene | DCBLD1 | chr11:77348635 | chr6:117853423 | ENST00000296955 | 4 | 15 | 460_480 | 195.0 | 540.0 | Transmembrane | Helical | |
| Tgene | DCBLD1 | chr11:77348635 | chr6:117853423 | ENST00000338728 | 4 | 15 | 460_480 | 195.0 | 716.0 | Transmembrane | Helical |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Tgene | DCBLD1 | chr11:77348635 | chr6:117853423 | ENST00000296955 | 4 | 15 | 152_248 | 195.0 | 540.0 | Domain | LCCL | |
| Tgene | DCBLD1 | chr11:77348635 | chr6:117853423 | ENST00000296955 | 4 | 15 | 41_150 | 195.0 | 540.0 | Domain | CUB | |
| Tgene | DCBLD1 | chr11:77348635 | chr6:117853423 | ENST00000338728 | 4 | 15 | 152_248 | 195.0 | 716.0 | Domain | LCCL | |
| Tgene | DCBLD1 | chr11:77348635 | chr6:117853423 | ENST00000338728 | 4 | 15 | 41_150 | 195.0 | 716.0 | Domain | CUB | |
| Tgene | DCBLD1 | chr11:77348635 | chr6:117853423 | ENST00000296955 | 4 | 15 | 35_459 | 195.0 | 540.0 | Topological domain | Extracellular | |
| Tgene | DCBLD1 | chr11:77348635 | chr6:117853423 | ENST00000338728 | 4 | 15 | 35_459 | 195.0 | 716.0 | Topological domain | Extracellular |
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Fusion Gene Sequence for CLNS1A-DCBLD1 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
| >In-frame_ENST00000525428_ENST00000368503_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(transcript)=1182nt_BP=216nt GGGGTGACTGCCTCTTCCAGGGCGGGCGGTGTGGTGCACGCATTGCTGTGCTCCAACTCCCTCAGGGCCTGTGTTGCCGCACTCTGCTGC TATGAGCTTCCTCAAAAGTTTCCCGCCGCCTGGGCCAGCGGAGGGGCTCCTGCGGCAGCAGCCAGACACTGAGGCTGTGCTGAACGGGAA GGGCCTCGGCACTGGTACCCTTTACATCGCTGAGAGACCTCTTTATTGTGCAAAGCTGCCATCCATGCAGGAATAATTGCTGATGAACTA GGTGGCCAGATCAGTGTGCTTCAGCGCAAAGGGATCAGTCGATATGAAGGGATTCTGGCCAATGGTGTTCTTTCGAGGGATGGTTCCCTG TCAGACAAGCGATTTCTGTTTACCTCCAATGGAATAAACATTACAACGGTGGCTATTCCATTGGTGCTCCTTGTTGTCCTGGTGTTTGCT GGAATGGGGATCTTTGCAGCCTTTAGAAAGAAGAAGAAGAAAGGAAGTCCGTATGGATCAGCAGAGGCTCAGAAAACAGACTGTTGGAAG CAGATTAAATATCCCTTTGCCAGACATCAGTCAGCTGAGTTTACCATCAGCTATGATAATGAGAAGGAGATGACACAAAAGTTAGATCTC ATCACAAGTGATATGGCAGATTACCAGCAGCCCCTCATGATTGGCACCGGGACAGTCACGAGGAAGGGCTCCACCTTCCGGCCCATGGAC ACGGATGCCGAGGAGGCAGGGGTGAGCACCGATGCCGGCGGCCACTATGACTGCCCGCAGCGGGCCGGCCGCCACGAGTACGCGCTGCCC CTGGCGCCCCCGGAGCCCGAGTACGCCACGCCCATCGTGGAGCGGCACGTGCTGCGCGCCCACACGTTCTCTGCGCAGAGCGGCTACCGC GTCCCAGGGCCCCAGCCCGGCCACAAACACTCCCTCTCCTCGGGCGGCTTCTCCCCCGTAGCGGGTGTGGGCGCCCAGGACGGAGACTAT CAAAGGCCACACAGCGCACAGCCTGCGGACAGGGGCTACGACCGGCCCAAAGCTGTCAGCGCCCTCGCCACCGAAAGCGGGCACCCTGAC TCTCAGAAGCCCCCAACGCATCCCGGGACGAGTGACAGCTATTCTGCCCCCAGAGACTGCCTCACACCCCTCAACCAGACGGCCATGACT >In-frame_ENST00000525428_ENST00000368503_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(amino acids)=318AA_start in transcript=225_stop in transcript=1181 MCKAAIHAGIIADELGGQISVLQRKGISRYEGILANGVLSRDGSLSDKRFLFTSNGINITTVAIPLVLLVVLVFAGMGIFAAFRKKKKKG SPYGSAEAQKTDCWKQIKYPFARHQSAEFTISYDNEKEMTQKLDLITSDMADYQQPLMIGTGTVTRKGSTFRPMDTDAEEAGVSTDAGGH YDCPQRAGRHEYALPLAPPEPEYATPIVERHVLRAHTFSAQSGYRVPGPQPGHKHSLSSGGFSPVAGVGAQDGDYQRPHSAQPADRGYDR -------------------------------------------------------------- >In-frame_ENST00000525428_ENST00000296955_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(transcript)=1485nt_BP=216nt GGGGTGACTGCCTCTTCCAGGGCGGGCGGTGTGGTGCACGCATTGCTGTGCTCCAACTCCCTCAGGGCCTGTGTTGCCGCACTCTGCTGC TATGAGCTTCCTCAAAAGTTTCCCGCCGCCTGGGCCAGCGGAGGGGCTCCTGCGGCAGCAGCCAGACACTGAGGCTGTGCTGAACGGGAA GGGCCTCGGCACTGGTACCCTTTACATCGCTGAGAGACCTCTTTATTGTGCAAAGCTGCCATCCATGCAGGAATAATTGCTGATGAACTA GGTGGCCAGATCAGTGTGCTTCAGCGCAAAGGGATCAGTCGATATGAAGGGATTCTGGCCAATGGTGTTCTTTCGAGGGATGGTTCCCTG TCAGACAAGCGATTTCTGTTTACCTCCAATGGTTGCAGCAGATCCTTGAGTTTTGAACCTGACGGGCAAATCAGAGCTTCTTCCTCATGG CAGTCGGTCAATGAGAGTGGAGACCAAGTTCACTGGTCTCCTGGCCAAGCCCGACTTCAGGACCAAGGCCCATCATGGGCTTCGGGCGAC AGTAGCAACAACCACAAACCACGAGAGTGGCTGGAGATCGATTTGGGGGAGAAAAAGAAAATAACAGGAATTAGGACCACAGGATCTACA CAGTCGAACTTCAACTTTTATGTTAAGAGTTTTGTGATGAACTTCAAAAACAATAATTCTAAGTGGAAGACCTATAAAGGAATTGTGAAT AATGAAGAAAAGGTGTTTCAGGGTAACTCTAACTTTCGGGACCCAGTGCAAAACAATTTCATCCCTCCCATCGTGGCCAGATATGTGCGG GTTGTCCCCCAGACATGGCACCAGAGGATAGCCTTGAAGGTGGAGCTCATTGGTTGCCAGATTACACAAGGTAATGATTCATTGGTGTGG CGCAAGACAAGTCAAAGCACCAGTGTTTCAACTAAGAAAGAAGATGAGACAATCACAAGGCCCATCCCCTCGGAAGAAACATCCACAGGA ATAAACATTACAACGGTGGCTATTCCATTGGTGCTCCTTGTTGTCCTGGTGTTTGCTGGAATGGGGATCTTTGCAGCCTTTAGAAAGAAG AAGAAGAAAGGAAGTCCGTATGGATCAGCAGAGGCTCAGAAAACAGACTGTTGGAAGCAGATTAAATATCCCTTTGCCAGACATCAGTCA GCTGAGTTTACCATCAGCTATGATAATGAGAAGGAGATGACACAAAAGTTAGATCTCATCACAAGTGATATGGCAGGTTAACTCCGTTGA CTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTATCAGCAGGTTGCCCCGGATGGATCTCAGAGATGAGGATTGGAACACCAT GTTCTTTCCCACCCTAACAACAACAAAGGGCAGTAAATTAAAGTACTCTTTGTAAGGTACAGTTACCGATTAATCTAGAGATAAAATATT >In-frame_ENST00000525428_ENST00000296955_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(amino acids)=341AA_start in transcript=225_stop in transcript=1250 MCKAAIHAGIIADELGGQISVLQRKGISRYEGILANGVLSRDGSLSDKRFLFTSNGCSRSLSFEPDGQIRASSSWQSVNESGDQVHWSPG QARLQDQGPSWASGDSSNNHKPREWLEIDLGEKKKITGIRTTGSTQSNFNFYVKSFVMNFKNNNSKWKTYKGIVNNEEKVFQGNSNFRDP VQNNFIPPIVARYVRVVPQTWHQRIALKVELIGCQITQGNDSLVWRKTSQSTSVSTKKEDETITRPIPSEETSTGINITTVAIPLVLLVV -------------------------------------------------------------- >In-frame_ENST00000525428_ENST00000338728_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(transcript)=3137nt_BP=216nt GGGGTGACTGCCTCTTCCAGGGCGGGCGGTGTGGTGCACGCATTGCTGTGCTCCAACTCCCTCAGGGCCTGTGTTGCCGCACTCTGCTGC TATGAGCTTCCTCAAAAGTTTCCCGCCGCCTGGGCCAGCGGAGGGGCTCCTGCGGCAGCAGCCAGACACTGAGGCTGTGCTGAACGGGAA GGGCCTCGGCACTGGTACCCTTTACATCGCTGAGAGACCTCTTTATTGTGCAAAGCTGCCATCCATGCAGGAATAATTGCTGATGAACTA GGTGGCCAGATCAGTGTGCTTCAGCGCAAAGGGATCAGTCGATATGAAGGGATTCTGGCCAATGGTGTTCTTTCGAGGGATGGTTCCCTG TCAGACAAGCGATTTCTGTTTACCTCCAATGGTTGCAGCAGATCCTTGAGTTTTGAACCTGACGGGCAAATCAGAGCTTCTTCCTCATGG CAGTCGGTCAATGAGAGTGGAGACCAAGTTCACTGGTCTCCTGGCCAAGCCCGACTTCAGGACCAAGGCCCATCATGGGCTTCGGGCGAC AGTAGCAACAACCACAAACCACGAGAGTGGCTGGAGATCGATTTGGGGGAGAAAAAGAAAATAACAGGAATTAGGACCACAGGATCTACA CAGTCGAACTTCAACTTTTATGTTAAGAGTTTTGTGATGAACTTCAAAAACAATAATTCTAAGTGGAAGACCTATAAAGGAATTGTGAAT AATGAAGAAAAGGTGTTTCAGGGTAACTCTAACTTTCGGGACCCAGTGCAAAACAATTTCATCCCTCCCATCGTGGCCAGATATGTGCGG GTTGTCCCCCAGACATGGCACCAGAGGATAGCCTTGAAGGTGGAGCTCATTGGTTGCCAGATTACACAAGGTAATGATTCATTGGTGTGG CGCAAGACAAGTCAAAGCACCAGTGTTTCAACTAAGAAAGAAGATGAGACAATCACAAGGCCCATCCCCTCGGAAGAAACATCCACAGGA ATAAACATTACAACGGTGGCTATTCCATTGGTGCTCCTTGTTGTCCTGGTGTTTGCTGGAATGGGGATCTTTGCAGCCTTTAGAAAGAAG AAGAAGAAAGGAAGTCCGTATGGATCAGCAGAGGCTCAGAAAACAGACTGTTGGAAGCAGATTAAATATCCCTTTGCCAGACATCAGTCA GCTGAGTTTACCATCAGCTATGATAATGAGAAGGAGATGACACAAAAGTTAGATCTCATCACAAGTGATATGGCAGATTACCAGCAGCCC CTCATGATTGGCACCGGGACAGTCACGAGGAAGGGCTCCACCTTCCGGCCCATGGACACGGATGCCGAGGAGGCAGGGGTGAGCACCGAT GCCGGCGGCCACTATGACTGCCCGCAGCGGGCCGGCCGCCACGAGTACGCGCTGCCCCTGGCGCCCCCGGAGCCCGAGTACGCCACGCCC ATCGTGGAGCGGCACGTGCTGCGCGCCCACACGTTCTCTGCGCAGAGCGGCTACCGCGTCCCAGGGCCCCAGCCCGGCCACAAACACTCC CTCTCCTCGGGCGGCTTCTCCCCCGTAGCGGGTGTGGGCGCCCAGGACGGAGACTATCAAAGGCCACACAGCGCACAGCCTGCGGACAGG GGCTACGACCGGCCCAAAGCTGTCAGCGCCCTCGCCACCGAAAGCGGGCACCCTGACTCTCAGAAGCCCCCAACGCATCCCGGGACGAGT GACAGCTATTCTGCCCCCAGAGACTGCCTCACACCCCTCAACCAGACGGCCATGACTGCCCTTTTGTGAACACAATGTGAAAGAAGCCTG CTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTGGTCCAGAGTGTGCGTGTGTATCGGTGTGTGTGTACA CTTGCATGTGTGTGTGTGATCCAGTAGGATCCTAGAGACAACCTGTCATACTGTTTACAAAATTGTGCAGCTGGTTTCGTGCTGACCCTT AGGGTGCGTCTGTTGGGTTTTGTTGGGCTAGAAAAATGAAAATTTTCAGATGGCGTTTTCATTCCTCTGACTGATATTGAGCTGCTTTGG TGTTAAAGGTGTAATGTGTACAGAGTTGTATTTAACAATAATAAAAGTAACTTAAGTTTGCTCTATCAGATTTTAGTTCTGCACAGAGGT TAAGTGGGAAAATGCAGCTGTTGCAAAATGTATATAAATAGTATGTTCATTTTTTTCAGTATATTATCTGATACTGTGTTAGCAGCAGGT CTGCTTAAACCTAGTCTTGTTGTTATTGAGTCATTTCCTCTCCTTTGATAACTAGAACTGAAAGCATTTTTAACATTCTTCTCCTGGAAG AAATGAATTACTTGAAGCATGAAAAGCACACCAGGGTGGTTGTTTATTTAGCAATTATGACTGTAGATTTAAAAACAAGCAAAGAAACAA CACCTCAGCAGCTGCCCGTTTCCTTAGTCTCCACTTCAGAGGGGGATGCGAAGAGGTCGGCCCAGCTCCGGTGACCATGAAGGTGGCACA GGAATTACAGTGTGAATGGCTGTGTCAGATGTTTTCGTACCTCAGATTAAAAATATTGCTGAGGTCAGACGCCACAATTTTCATGACTTT CTTCAGAAGTAGCACATTTTCGTGACTTCCGCTGTCCTCTGAAAAACAAAGTTATTTGGAACATGTTCATGCAAAAGTGATTCTGACCAA GTCTAAATCGAGCTTTTCTACTGACATGAAACTGTTGGAAACTGATCTCATTTTATAAGAAATGATTTTCCCCTCAAGGAGGCGTCTGTA ATTCCAGAACAGTCCAGACATCAGCTGTACCTCATGCTCAGTAGTTTTTATTTGAGTTTCTTTTGTGAGTTAACTATGGGAGATTTAACC TCTTTTGCCAAAGAGGGAAGTGTGTGTGTTTTTTTAATAGAAAATATGGACCAAAAATTTTTTTCCCTGAAGAATGTATTATAACCCTAT TTGTGTGGTTATTACATCCTGTGAAATGTATATATGTTAAAATAATGGGGGTGCTGGAAGGTCATGGCAGACTAGCTGCTGGTTAGTGTG >In-frame_ENST00000525428_ENST00000338728_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(amino acids)=517AA_start in transcript=225_stop in transcript=1778 MCKAAIHAGIIADELGGQISVLQRKGISRYEGILANGVLSRDGSLSDKRFLFTSNGCSRSLSFEPDGQIRASSSWQSVNESGDQVHWSPG QARLQDQGPSWASGDSSNNHKPREWLEIDLGEKKKITGIRTTGSTQSNFNFYVKSFVMNFKNNNSKWKTYKGIVNNEEKVFQGNSNFRDP VQNNFIPPIVARYVRVVPQTWHQRIALKVELIGCQITQGNDSLVWRKTSQSTSVSTKKEDETITRPIPSEETSTGINITTVAIPLVLLVV LVFAGMGIFAAFRKKKKKGSPYGSAEAQKTDCWKQIKYPFARHQSAEFTISYDNEKEMTQKLDLITSDMADYQQPLMIGTGTVTRKGSTF RPMDTDAEEAGVSTDAGGHYDCPQRAGRHEYALPLAPPEPEYATPIVERHVLRAHTFSAQSGYRVPGPQPGHKHSLSSGGFSPVAGVGAQ -------------------------------------------------------------- >In-frame_ENST00000263309_ENST00000368503_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(transcript)=1128nt_BP=162nt AACTCCCTCAGGGCCTGTGTTGCCGCACTCTGCTGCTATGAGCTTCCTCAAAAGTTTCCCGCCGCCTGGGCCAGCGGAGGGGCTCCTGCG GCAGCAGCCAGACACTGAGGCTGTGCTGAACGGGAAGGGCCTCGGCACTGGTACCCTTTACATCGCTGAGAGACCTCTTTATTGTGCAAA GCTGCCATCCATGCAGGAATAATTGCTGATGAACTAGGTGGCCAGATCAGTGTGCTTCAGCGCAAAGGGATCAGTCGATATGAAGGGATT CTGGCCAATGGTGTTCTTTCGAGGGATGGTTCCCTGTCAGACAAGCGATTTCTGTTTACCTCCAATGGAATAAACATTACAACGGTGGCT ATTCCATTGGTGCTCCTTGTTGTCCTGGTGTTTGCTGGAATGGGGATCTTTGCAGCCTTTAGAAAGAAGAAGAAGAAAGGAAGTCCGTAT GGATCAGCAGAGGCTCAGAAAACAGACTGTTGGAAGCAGATTAAATATCCCTTTGCCAGACATCAGTCAGCTGAGTTTACCATCAGCTAT GATAATGAGAAGGAGATGACACAAAAGTTAGATCTCATCACAAGTGATATGGCAGATTACCAGCAGCCCCTCATGATTGGCACCGGGACA GTCACGAGGAAGGGCTCCACCTTCCGGCCCATGGACACGGATGCCGAGGAGGCAGGGGTGAGCACCGATGCCGGCGGCCACTATGACTGC CCGCAGCGGGCCGGCCGCCACGAGTACGCGCTGCCCCTGGCGCCCCCGGAGCCCGAGTACGCCACGCCCATCGTGGAGCGGCACGTGCTG CGCGCCCACACGTTCTCTGCGCAGAGCGGCTACCGCGTCCCAGGGCCCCAGCCCGGCCACAAACACTCCCTCTCCTCGGGCGGCTTCTCC CCCGTAGCGGGTGTGGGCGCCCAGGACGGAGACTATCAAAGGCCACACAGCGCACAGCCTGCGGACAGGGGCTACGACCGGCCCAAAGCT GTCAGCGCCCTCGCCACCGAAAGCGGGCACCCTGACTCTCAGAAGCCCCCAACGCATCCCGGGACGAGTGACAGCTATTCTGCCCCCAGA >In-frame_ENST00000263309_ENST00000368503_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(amino acids)=318AA_start in transcript=171_stop in transcript=1127 MCKAAIHAGIIADELGGQISVLQRKGISRYEGILANGVLSRDGSLSDKRFLFTSNGINITTVAIPLVLLVVLVFAGMGIFAAFRKKKKKG SPYGSAEAQKTDCWKQIKYPFARHQSAEFTISYDNEKEMTQKLDLITSDMADYQQPLMIGTGTVTRKGSTFRPMDTDAEEAGVSTDAGGH YDCPQRAGRHEYALPLAPPEPEYATPIVERHVLRAHTFSAQSGYRVPGPQPGHKHSLSSGGFSPVAGVGAQDGDYQRPHSAQPADRGYDR -------------------------------------------------------------- >In-frame_ENST00000263309_ENST00000296955_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(transcript)=1431nt_BP=162nt AACTCCCTCAGGGCCTGTGTTGCCGCACTCTGCTGCTATGAGCTTCCTCAAAAGTTTCCCGCCGCCTGGGCCAGCGGAGGGGCTCCTGCG GCAGCAGCCAGACACTGAGGCTGTGCTGAACGGGAAGGGCCTCGGCACTGGTACCCTTTACATCGCTGAGAGACCTCTTTATTGTGCAAA GCTGCCATCCATGCAGGAATAATTGCTGATGAACTAGGTGGCCAGATCAGTGTGCTTCAGCGCAAAGGGATCAGTCGATATGAAGGGATT CTGGCCAATGGTGTTCTTTCGAGGGATGGTTCCCTGTCAGACAAGCGATTTCTGTTTACCTCCAATGGTTGCAGCAGATCCTTGAGTTTT GAACCTGACGGGCAAATCAGAGCTTCTTCCTCATGGCAGTCGGTCAATGAGAGTGGAGACCAAGTTCACTGGTCTCCTGGCCAAGCCCGA CTTCAGGACCAAGGCCCATCATGGGCTTCGGGCGACAGTAGCAACAACCACAAACCACGAGAGTGGCTGGAGATCGATTTGGGGGAGAAA AAGAAAATAACAGGAATTAGGACCACAGGATCTACACAGTCGAACTTCAACTTTTATGTTAAGAGTTTTGTGATGAACTTCAAAAACAAT AATTCTAAGTGGAAGACCTATAAAGGAATTGTGAATAATGAAGAAAAGGTGTTTCAGGGTAACTCTAACTTTCGGGACCCAGTGCAAAAC AATTTCATCCCTCCCATCGTGGCCAGATATGTGCGGGTTGTCCCCCAGACATGGCACCAGAGGATAGCCTTGAAGGTGGAGCTCATTGGT TGCCAGATTACACAAGGTAATGATTCATTGGTGTGGCGCAAGACAAGTCAAAGCACCAGTGTTTCAACTAAGAAAGAAGATGAGACAATC ACAAGGCCCATCCCCTCGGAAGAAACATCCACAGGAATAAACATTACAACGGTGGCTATTCCATTGGTGCTCCTTGTTGTCCTGGTGTTT GCTGGAATGGGGATCTTTGCAGCCTTTAGAAAGAAGAAGAAGAAAGGAAGTCCGTATGGATCAGCAGAGGCTCAGAAAACAGACTGTTGG AAGCAGATTAAATATCCCTTTGCCAGACATCAGTCAGCTGAGTTTACCATCAGCTATGATAATGAGAAGGAGATGACACAAAAGTTAGAT CTCATCACAAGTGATATGGCAGGTTAACTCCGTTGACTGCCAAAATAGCATCCCCAACGTGCAGCCCTCCGCATCTATCAGCAGGTTGCC CCGGATGGATCTCAGAGATGAGGATTGGAACACCATGTTCTTTCCCACCCTAACAACAACAAAGGGCAGTAAATTAAAGTACTCTTTGTA >In-frame_ENST00000263309_ENST00000296955_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(amino acids)=341AA_start in transcript=171_stop in transcript=1196 MCKAAIHAGIIADELGGQISVLQRKGISRYEGILANGVLSRDGSLSDKRFLFTSNGCSRSLSFEPDGQIRASSSWQSVNESGDQVHWSPG QARLQDQGPSWASGDSSNNHKPREWLEIDLGEKKKITGIRTTGSTQSNFNFYVKSFVMNFKNNNSKWKTYKGIVNNEEKVFQGNSNFRDP VQNNFIPPIVARYVRVVPQTWHQRIALKVELIGCQITQGNDSLVWRKTSQSTSVSTKKEDETITRPIPSEETSTGINITTVAIPLVLLVV -------------------------------------------------------------- >In-frame_ENST00000263309_ENST00000338728_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(transcript)=3083nt_BP=162nt AACTCCCTCAGGGCCTGTGTTGCCGCACTCTGCTGCTATGAGCTTCCTCAAAAGTTTCCCGCCGCCTGGGCCAGCGGAGGGGCTCCTGCG GCAGCAGCCAGACACTGAGGCTGTGCTGAACGGGAAGGGCCTCGGCACTGGTACCCTTTACATCGCTGAGAGACCTCTTTATTGTGCAAA GCTGCCATCCATGCAGGAATAATTGCTGATGAACTAGGTGGCCAGATCAGTGTGCTTCAGCGCAAAGGGATCAGTCGATATGAAGGGATT CTGGCCAATGGTGTTCTTTCGAGGGATGGTTCCCTGTCAGACAAGCGATTTCTGTTTACCTCCAATGGTTGCAGCAGATCCTTGAGTTTT GAACCTGACGGGCAAATCAGAGCTTCTTCCTCATGGCAGTCGGTCAATGAGAGTGGAGACCAAGTTCACTGGTCTCCTGGCCAAGCCCGA CTTCAGGACCAAGGCCCATCATGGGCTTCGGGCGACAGTAGCAACAACCACAAACCACGAGAGTGGCTGGAGATCGATTTGGGGGAGAAA AAGAAAATAACAGGAATTAGGACCACAGGATCTACACAGTCGAACTTCAACTTTTATGTTAAGAGTTTTGTGATGAACTTCAAAAACAAT AATTCTAAGTGGAAGACCTATAAAGGAATTGTGAATAATGAAGAAAAGGTGTTTCAGGGTAACTCTAACTTTCGGGACCCAGTGCAAAAC AATTTCATCCCTCCCATCGTGGCCAGATATGTGCGGGTTGTCCCCCAGACATGGCACCAGAGGATAGCCTTGAAGGTGGAGCTCATTGGT TGCCAGATTACACAAGGTAATGATTCATTGGTGTGGCGCAAGACAAGTCAAAGCACCAGTGTTTCAACTAAGAAAGAAGATGAGACAATC ACAAGGCCCATCCCCTCGGAAGAAACATCCACAGGAATAAACATTACAACGGTGGCTATTCCATTGGTGCTCCTTGTTGTCCTGGTGTTT GCTGGAATGGGGATCTTTGCAGCCTTTAGAAAGAAGAAGAAGAAAGGAAGTCCGTATGGATCAGCAGAGGCTCAGAAAACAGACTGTTGG AAGCAGATTAAATATCCCTTTGCCAGACATCAGTCAGCTGAGTTTACCATCAGCTATGATAATGAGAAGGAGATGACACAAAAGTTAGAT CTCATCACAAGTGATATGGCAGATTACCAGCAGCCCCTCATGATTGGCACCGGGACAGTCACGAGGAAGGGCTCCACCTTCCGGCCCATG GACACGGATGCCGAGGAGGCAGGGGTGAGCACCGATGCCGGCGGCCACTATGACTGCCCGCAGCGGGCCGGCCGCCACGAGTACGCGCTG CCCCTGGCGCCCCCGGAGCCCGAGTACGCCACGCCCATCGTGGAGCGGCACGTGCTGCGCGCCCACACGTTCTCTGCGCAGAGCGGCTAC CGCGTCCCAGGGCCCCAGCCCGGCCACAAACACTCCCTCTCCTCGGGCGGCTTCTCCCCCGTAGCGGGTGTGGGCGCCCAGGACGGAGAC TATCAAAGGCCACACAGCGCACAGCCTGCGGACAGGGGCTACGACCGGCCCAAAGCTGTCAGCGCCCTCGCCACCGAAAGCGGGCACCCT GACTCTCAGAAGCCCCCAACGCATCCCGGGACGAGTGACAGCTATTCTGCCCCCAGAGACTGCCTCACACCCCTCAACCAGACGGCCATG ACTGCCCTTTTGTGAACACAATGTGAAAGAAGCCTGCTGTGGTACTGAGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTG GTCCAGAGTGTGCGTGTGTATCGGTGTGTGTGTACACTTGCATGTGTGTGTGTGATCCAGTAGGATCCTAGAGACAACCTGTCATACTGT TTACAAAATTGTGCAGCTGGTTTCGTGCTGACCCTTAGGGTGCGTCTGTTGGGTTTTGTTGGGCTAGAAAAATGAAAATTTTCAGATGGC GTTTTCATTCCTCTGACTGATATTGAGCTGCTTTGGTGTTAAAGGTGTAATGTGTACAGAGTTGTATTTAACAATAATAAAAGTAACTTA AGTTTGCTCTATCAGATTTTAGTTCTGCACAGAGGTTAAGTGGGAAAATGCAGCTGTTGCAAAATGTATATAAATAGTATGTTCATTTTT TTCAGTATATTATCTGATACTGTGTTAGCAGCAGGTCTGCTTAAACCTAGTCTTGTTGTTATTGAGTCATTTCCTCTCCTTTGATAACTA GAACTGAAAGCATTTTTAACATTCTTCTCCTGGAAGAAATGAATTACTTGAAGCATGAAAAGCACACCAGGGTGGTTGTTTATTTAGCAA TTATGACTGTAGATTTAAAAACAAGCAAAGAAACAACACCTCAGCAGCTGCCCGTTTCCTTAGTCTCCACTTCAGAGGGGGATGCGAAGA GGTCGGCCCAGCTCCGGTGACCATGAAGGTGGCACAGGAATTACAGTGTGAATGGCTGTGTCAGATGTTTTCGTACCTCAGATTAAAAAT ATTGCTGAGGTCAGACGCCACAATTTTCATGACTTTCTTCAGAAGTAGCACATTTTCGTGACTTCCGCTGTCCTCTGAAAAACAAAGTTA TTTGGAACATGTTCATGCAAAAGTGATTCTGACCAAGTCTAAATCGAGCTTTTCTACTGACATGAAACTGTTGGAAACTGATCTCATTTT ATAAGAAATGATTTTCCCCTCAAGGAGGCGTCTGTAATTCCAGAACAGTCCAGACATCAGCTGTACCTCATGCTCAGTAGTTTTTATTTG AGTTTCTTTTGTGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGGAAGTGTGTGTGTTTTTTTAATAGAAAATATGGACCAA AAATTTTTTTCCCTGAAGAATGTATTATAACCCTATTTGTGTGGTTATTACATCCTGTGAAATGTATATATGTTAAAATAATGGGGGTGC TGGAAGGTCATGGCAGACTAGCTGCTGGTTAGTGTGGAGGGGAAATGGTTTACTTTGTAGAGTTTACATGGTTTTATGCGCACACTAATT >In-frame_ENST00000263309_ENST00000338728_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(amino acids)=517AA_start in transcript=171_stop in transcript=1724 MCKAAIHAGIIADELGGQISVLQRKGISRYEGILANGVLSRDGSLSDKRFLFTSNGCSRSLSFEPDGQIRASSSWQSVNESGDQVHWSPG QARLQDQGPSWASGDSSNNHKPREWLEIDLGEKKKITGIRTTGSTQSNFNFYVKSFVMNFKNNNSKWKTYKGIVNNEEKVFQGNSNFRDP VQNNFIPPIVARYVRVVPQTWHQRIALKVELIGCQITQGNDSLVWRKTSQSTSVSTKKEDETITRPIPSEETSTGINITTVAIPLVLLVV LVFAGMGIFAAFRKKKKKGSPYGSAEAQKTDCWKQIKYPFARHQSAEFTISYDNEKEMTQKLDLITSDMADYQQPLMIGTGTVTRKGSTF RPMDTDAEEAGVSTDAGGHYDCPQRAGRHEYALPLAPPEPEYATPIVERHVLRAHTFSAQSGYRVPGPQPGHKHSLSSGGFSPVAGVGAQ -------------------------------------------------------------- >In-frame_ENST00000525064_ENST00000368503_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(transcript)=1149nt_BP=183nt GTGCACGCATTGCTGTGCTCCAACTCCCTCAGGGCCTGTGTTGCCGCACTCTGCTGCTATGAGCTTCCTCAAAAGTTTCCCGCCGCCTGG GCCAGCGGAGGGGCTCCTGCGGCAGCAGCCAGACACTGAGGCTGTGCTGAACGGGAAGGGCCTCGGCACTGGTACCCTTTACATCGCTGA GAGACCTCTTTATTGTGCAAAGCTGCCATCCATGCAGGAATAATTGCTGATGAACTAGGTGGCCAGATCAGTGTGCTTCAGCGCAAAGGG ATCAGTCGATATGAAGGGATTCTGGCCAATGGTGTTCTTTCGAGGGATGGTTCCCTGTCAGACAAGCGATTTCTGTTTACCTCCAATGGA ATAAACATTACAACGGTGGCTATTCCATTGGTGCTCCTTGTTGTCCTGGTGTTTGCTGGAATGGGGATCTTTGCAGCCTTTAGAAAGAAG AAGAAGAAAGGAAGTCCGTATGGATCAGCAGAGGCTCAGAAAACAGACTGTTGGAAGCAGATTAAATATCCCTTTGCCAGACATCAGTCA GCTGAGTTTACCATCAGCTATGATAATGAGAAGGAGATGACACAAAAGTTAGATCTCATCACAAGTGATATGGCAGATTACCAGCAGCCC CTCATGATTGGCACCGGGACAGTCACGAGGAAGGGCTCCACCTTCCGGCCCATGGACACGGATGCCGAGGAGGCAGGGGTGAGCACCGAT GCCGGCGGCCACTATGACTGCCCGCAGCGGGCCGGCCGCCACGAGTACGCGCTGCCCCTGGCGCCCCCGGAGCCCGAGTACGCCACGCCC ATCGTGGAGCGGCACGTGCTGCGCGCCCACACGTTCTCTGCGCAGAGCGGCTACCGCGTCCCAGGGCCCCAGCCCGGCCACAAACACTCC CTCTCCTCGGGCGGCTTCTCCCCCGTAGCGGGTGTGGGCGCCCAGGACGGAGACTATCAAAGGCCACACAGCGCACAGCCTGCGGACAGG GGCTACGACCGGCCCAAAGCTGTCAGCGCCCTCGCCACCGAAAGCGGGCACCCTGACTCTCAGAAGCCCCCAACGCATCCCGGGACGAGT >In-frame_ENST00000525064_ENST00000368503_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(amino acids)=318AA_start in transcript=192_stop in transcript=1148 MCKAAIHAGIIADELGGQISVLQRKGISRYEGILANGVLSRDGSLSDKRFLFTSNGINITTVAIPLVLLVVLVFAGMGIFAAFRKKKKKG SPYGSAEAQKTDCWKQIKYPFARHQSAEFTISYDNEKEMTQKLDLITSDMADYQQPLMIGTGTVTRKGSTFRPMDTDAEEAGVSTDAGGH YDCPQRAGRHEYALPLAPPEPEYATPIVERHVLRAHTFSAQSGYRVPGPQPGHKHSLSSGGFSPVAGVGAQDGDYQRPHSAQPADRGYDR -------------------------------------------------------------- >In-frame_ENST00000525064_ENST00000296955_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(transcript)=1452nt_BP=183nt GTGCACGCATTGCTGTGCTCCAACTCCCTCAGGGCCTGTGTTGCCGCACTCTGCTGCTATGAGCTTCCTCAAAAGTTTCCCGCCGCCTGG GCCAGCGGAGGGGCTCCTGCGGCAGCAGCCAGACACTGAGGCTGTGCTGAACGGGAAGGGCCTCGGCACTGGTACCCTTTACATCGCTGA GAGACCTCTTTATTGTGCAAAGCTGCCATCCATGCAGGAATAATTGCTGATGAACTAGGTGGCCAGATCAGTGTGCTTCAGCGCAAAGGG ATCAGTCGATATGAAGGGATTCTGGCCAATGGTGTTCTTTCGAGGGATGGTTCCCTGTCAGACAAGCGATTTCTGTTTACCTCCAATGGT TGCAGCAGATCCTTGAGTTTTGAACCTGACGGGCAAATCAGAGCTTCTTCCTCATGGCAGTCGGTCAATGAGAGTGGAGACCAAGTTCAC TGGTCTCCTGGCCAAGCCCGACTTCAGGACCAAGGCCCATCATGGGCTTCGGGCGACAGTAGCAACAACCACAAACCACGAGAGTGGCTG GAGATCGATTTGGGGGAGAAAAAGAAAATAACAGGAATTAGGACCACAGGATCTACACAGTCGAACTTCAACTTTTATGTTAAGAGTTTT GTGATGAACTTCAAAAACAATAATTCTAAGTGGAAGACCTATAAAGGAATTGTGAATAATGAAGAAAAGGTGTTTCAGGGTAACTCTAAC TTTCGGGACCCAGTGCAAAACAATTTCATCCCTCCCATCGTGGCCAGATATGTGCGGGTTGTCCCCCAGACATGGCACCAGAGGATAGCC TTGAAGGTGGAGCTCATTGGTTGCCAGATTACACAAGGTAATGATTCATTGGTGTGGCGCAAGACAAGTCAAAGCACCAGTGTTTCAACT AAGAAAGAAGATGAGACAATCACAAGGCCCATCCCCTCGGAAGAAACATCCACAGGAATAAACATTACAACGGTGGCTATTCCATTGGTG CTCCTTGTTGTCCTGGTGTTTGCTGGAATGGGGATCTTTGCAGCCTTTAGAAAGAAGAAGAAGAAAGGAAGTCCGTATGGATCAGCAGAG GCTCAGAAAACAGACTGTTGGAAGCAGATTAAATATCCCTTTGCCAGACATCAGTCAGCTGAGTTTACCATCAGCTATGATAATGAGAAG GAGATGACACAAAAGTTAGATCTCATCACAAGTGATATGGCAGGTTAACTCCGTTGACTGCCAAAATAGCATCCCCAACGTGCAGCCCTC CGCATCTATCAGCAGGTTGCCCCGGATGGATCTCAGAGATGAGGATTGGAACACCATGTTCTTTCCCACCCTAACAACAACAAAGGGCAG TAAATTAAAGTACTCTTTGTAAGGTACAGTTACCGATTAATCTAGAGATAAAATATTTTCTTAAAAATATATTTCATTAAACACCTATGC >In-frame_ENST00000525064_ENST00000296955_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(amino acids)=341AA_start in transcript=192_stop in transcript=1217 MCKAAIHAGIIADELGGQISVLQRKGISRYEGILANGVLSRDGSLSDKRFLFTSNGCSRSLSFEPDGQIRASSSWQSVNESGDQVHWSPG QARLQDQGPSWASGDSSNNHKPREWLEIDLGEKKKITGIRTTGSTQSNFNFYVKSFVMNFKNNNSKWKTYKGIVNNEEKVFQGNSNFRDP VQNNFIPPIVARYVRVVPQTWHQRIALKVELIGCQITQGNDSLVWRKTSQSTSVSTKKEDETITRPIPSEETSTGINITTVAIPLVLLVV -------------------------------------------------------------- >In-frame_ENST00000525064_ENST00000338728_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(transcript)=3104nt_BP=183nt GTGCACGCATTGCTGTGCTCCAACTCCCTCAGGGCCTGTGTTGCCGCACTCTGCTGCTATGAGCTTCCTCAAAAGTTTCCCGCCGCCTGG GCCAGCGGAGGGGCTCCTGCGGCAGCAGCCAGACACTGAGGCTGTGCTGAACGGGAAGGGCCTCGGCACTGGTACCCTTTACATCGCTGA GAGACCTCTTTATTGTGCAAAGCTGCCATCCATGCAGGAATAATTGCTGATGAACTAGGTGGCCAGATCAGTGTGCTTCAGCGCAAAGGG ATCAGTCGATATGAAGGGATTCTGGCCAATGGTGTTCTTTCGAGGGATGGTTCCCTGTCAGACAAGCGATTTCTGTTTACCTCCAATGGT TGCAGCAGATCCTTGAGTTTTGAACCTGACGGGCAAATCAGAGCTTCTTCCTCATGGCAGTCGGTCAATGAGAGTGGAGACCAAGTTCAC TGGTCTCCTGGCCAAGCCCGACTTCAGGACCAAGGCCCATCATGGGCTTCGGGCGACAGTAGCAACAACCACAAACCACGAGAGTGGCTG GAGATCGATTTGGGGGAGAAAAAGAAAATAACAGGAATTAGGACCACAGGATCTACACAGTCGAACTTCAACTTTTATGTTAAGAGTTTT GTGATGAACTTCAAAAACAATAATTCTAAGTGGAAGACCTATAAAGGAATTGTGAATAATGAAGAAAAGGTGTTTCAGGGTAACTCTAAC TTTCGGGACCCAGTGCAAAACAATTTCATCCCTCCCATCGTGGCCAGATATGTGCGGGTTGTCCCCCAGACATGGCACCAGAGGATAGCC TTGAAGGTGGAGCTCATTGGTTGCCAGATTACACAAGGTAATGATTCATTGGTGTGGCGCAAGACAAGTCAAAGCACCAGTGTTTCAACT AAGAAAGAAGATGAGACAATCACAAGGCCCATCCCCTCGGAAGAAACATCCACAGGAATAAACATTACAACGGTGGCTATTCCATTGGTG CTCCTTGTTGTCCTGGTGTTTGCTGGAATGGGGATCTTTGCAGCCTTTAGAAAGAAGAAGAAGAAAGGAAGTCCGTATGGATCAGCAGAG GCTCAGAAAACAGACTGTTGGAAGCAGATTAAATATCCCTTTGCCAGACATCAGTCAGCTGAGTTTACCATCAGCTATGATAATGAGAAG GAGATGACACAAAAGTTAGATCTCATCACAAGTGATATGGCAGATTACCAGCAGCCCCTCATGATTGGCACCGGGACAGTCACGAGGAAG GGCTCCACCTTCCGGCCCATGGACACGGATGCCGAGGAGGCAGGGGTGAGCACCGATGCCGGCGGCCACTATGACTGCCCGCAGCGGGCC GGCCGCCACGAGTACGCGCTGCCCCTGGCGCCCCCGGAGCCCGAGTACGCCACGCCCATCGTGGAGCGGCACGTGCTGCGCGCCCACACG TTCTCTGCGCAGAGCGGCTACCGCGTCCCAGGGCCCCAGCCCGGCCACAAACACTCCCTCTCCTCGGGCGGCTTCTCCCCCGTAGCGGGT GTGGGCGCCCAGGACGGAGACTATCAAAGGCCACACAGCGCACAGCCTGCGGACAGGGGCTACGACCGGCCCAAAGCTGTCAGCGCCCTC GCCACCGAAAGCGGGCACCCTGACTCTCAGAAGCCCCCAACGCATCCCGGGACGAGTGACAGCTATTCTGCCCCCAGAGACTGCCTCACA CCCCTCAACCAGACGGCCATGACTGCCCTTTTGTGAACACAATGTGAAAGAAGCCTGCTGTGGTACTGAGCGTCGGGCTGTCACAAGGCA CTGGAAGAAGGGAGCCTGCTGGTCCAGAGTGTGCGTGTGTATCGGTGTGTGTGTACACTTGCATGTGTGTGTGTGATCCAGTAGGATCCT AGAGACAACCTGTCATACTGTTTACAAAATTGTGCAGCTGGTTTCGTGCTGACCCTTAGGGTGCGTCTGTTGGGTTTTGTTGGGCTAGAA AAATGAAAATTTTCAGATGGCGTTTTCATTCCTCTGACTGATATTGAGCTGCTTTGGTGTTAAAGGTGTAATGTGTACAGAGTTGTATTT AACAATAATAAAAGTAACTTAAGTTTGCTCTATCAGATTTTAGTTCTGCACAGAGGTTAAGTGGGAAAATGCAGCTGTTGCAAAATGTAT ATAAATAGTATGTTCATTTTTTTCAGTATATTATCTGATACTGTGTTAGCAGCAGGTCTGCTTAAACCTAGTCTTGTTGTTATTGAGTCA TTTCCTCTCCTTTGATAACTAGAACTGAAAGCATTTTTAACATTCTTCTCCTGGAAGAAATGAATTACTTGAAGCATGAAAAGCACACCA GGGTGGTTGTTTATTTAGCAATTATGACTGTAGATTTAAAAACAAGCAAAGAAACAACACCTCAGCAGCTGCCCGTTTCCTTAGTCTCCA CTTCAGAGGGGGATGCGAAGAGGTCGGCCCAGCTCCGGTGACCATGAAGGTGGCACAGGAATTACAGTGTGAATGGCTGTGTCAGATGTT TTCGTACCTCAGATTAAAAATATTGCTGAGGTCAGACGCCACAATTTTCATGACTTTCTTCAGAAGTAGCACATTTTCGTGACTTCCGCT GTCCTCTGAAAAACAAAGTTATTTGGAACATGTTCATGCAAAAGTGATTCTGACCAAGTCTAAATCGAGCTTTTCTACTGACATGAAACT GTTGGAAACTGATCTCATTTTATAAGAAATGATTTTCCCCTCAAGGAGGCGTCTGTAATTCCAGAACAGTCCAGACATCAGCTGTACCTC ATGCTCAGTAGTTTTTATTTGAGTTTCTTTTGTGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGGAAGTGTGTGTGTTTTT TTAATAGAAAATATGGACCAAAAATTTTTTTCCCTGAAGAATGTATTATAACCCTATTTGTGTGGTTATTACATCCTGTGAAATGTATAT ATGTTAAAATAATGGGGGTGCTGGAAGGTCATGGCAGACTAGCTGCTGGTTAGTGTGGAGGGGAAATGGTTTACTTTGTAGAGTTTACAT >In-frame_ENST00000525064_ENST00000338728_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(amino acids)=517AA_start in transcript=192_stop in transcript=1745 MCKAAIHAGIIADELGGQISVLQRKGISRYEGILANGVLSRDGSLSDKRFLFTSNGCSRSLSFEPDGQIRASSSWQSVNESGDQVHWSPG QARLQDQGPSWASGDSSNNHKPREWLEIDLGEKKKITGIRTTGSTQSNFNFYVKSFVMNFKNNNSKWKTYKGIVNNEEKVFQGNSNFRDP VQNNFIPPIVARYVRVVPQTWHQRIALKVELIGCQITQGNDSLVWRKTSQSTSVSTKKEDETITRPIPSEETSTGINITTVAIPLVLLVV LVFAGMGIFAAFRKKKKKGSPYGSAEAQKTDCWKQIKYPFARHQSAEFTISYDNEKEMTQKLDLITSDMADYQQPLMIGTGTVTRKGSTF RPMDTDAEEAGVSTDAGGHYDCPQRAGRHEYALPLAPPEPEYATPIVERHVLRAHTFSAQSGYRVPGPQPGHKHSLSSGGFSPVAGVGAQ -------------------------------------------------------------- >In-frame_ENST00000532069_ENST00000368503_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(transcript)=1171nt_BP=205nt CTCTTCCAGGGCGGGCGGTGTGGTGCACGCATTGCTGTGCTCCAACTCCCTCAGGGCCTGTGTTGCCGCACTCTGCTGCTATGAGCTTCC TCAAAAGTTTCCCGCCGCCTGGGCCAGCGGAGGGGCTCCTGCGGCAGCAGCCAGACACTGAGGCTGTGCTGAACGGGAAGGGCCTCGGCA CTGGTACCCTTTACATCGCTGAGAGACCTCTTTATTGTGCAAAGCTGCCATCCATGCAGGAATAATTGCTGATGAACTAGGTGGCCAGAT CAGTGTGCTTCAGCGCAAAGGGATCAGTCGATATGAAGGGATTCTGGCCAATGGTGTTCTTTCGAGGGATGGTTCCCTGTCAGACAAGCG ATTTCTGTTTACCTCCAATGGAATAAACATTACAACGGTGGCTATTCCATTGGTGCTCCTTGTTGTCCTGGTGTTTGCTGGAATGGGGAT CTTTGCAGCCTTTAGAAAGAAGAAGAAGAAAGGAAGTCCGTATGGATCAGCAGAGGCTCAGAAAACAGACTGTTGGAAGCAGATTAAATA TCCCTTTGCCAGACATCAGTCAGCTGAGTTTACCATCAGCTATGATAATGAGAAGGAGATGACACAAAAGTTAGATCTCATCACAAGTGA TATGGCAGATTACCAGCAGCCCCTCATGATTGGCACCGGGACAGTCACGAGGAAGGGCTCCACCTTCCGGCCCATGGACACGGATGCCGA GGAGGCAGGGGTGAGCACCGATGCCGGCGGCCACTATGACTGCCCGCAGCGGGCCGGCCGCCACGAGTACGCGCTGCCCCTGGCGCCCCC GGAGCCCGAGTACGCCACGCCCATCGTGGAGCGGCACGTGCTGCGCGCCCACACGTTCTCTGCGCAGAGCGGCTACCGCGTCCCAGGGCC CCAGCCCGGCCACAAACACTCCCTCTCCTCGGGCGGCTTCTCCCCCGTAGCGGGTGTGGGCGCCCAGGACGGAGACTATCAAAGGCCACA CAGCGCACAGCCTGCGGACAGGGGCTACGACCGGCCCAAAGCTGTCAGCGCCCTCGCCACCGAAAGCGGGCACCCTGACTCTCAGAAGCC CCCAACGCATCCCGGGACGAGTGACAGCTATTCTGCCCCCAGAGACTGCCTCACACCCCTCAACCAGACGGCCATGACTGCCCTTTTGTG >In-frame_ENST00000532069_ENST00000368503_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(amino acids)=319AA_start in transcript=214_stop in transcript=1170 MCKAAIHAGIIADELGGQISVLQRKGISRYEGILANGVLSRDGSLSDKRFLFTSNGINITTVAIPLVLLVVLVFAGMGIFAAFRKKKKKG SPYGSAEAQKTDCWKQIKYPFARHQSAEFTISYDNEKEMTQKLDLITSDMADYQQPLMIGTGTVTRKGSTFRPMDTDAEEAGVSTDAGGH YDCPQRAGRHEYALPLAPPEPEYATPIVERHVLRAHTFSAQSGYRVPGPQPGHKHSLSSGGFSPVAGVGAQDGDYQRPHSAQPADRGYDR -------------------------------------------------------------- >In-frame_ENST00000532069_ENST00000296955_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(transcript)=1474nt_BP=205nt CTCTTCCAGGGCGGGCGGTGTGGTGCACGCATTGCTGTGCTCCAACTCCCTCAGGGCCTGTGTTGCCGCACTCTGCTGCTATGAGCTTCC TCAAAAGTTTCCCGCCGCCTGGGCCAGCGGAGGGGCTCCTGCGGCAGCAGCCAGACACTGAGGCTGTGCTGAACGGGAAGGGCCTCGGCA CTGGTACCCTTTACATCGCTGAGAGACCTCTTTATTGTGCAAAGCTGCCATCCATGCAGGAATAATTGCTGATGAACTAGGTGGCCAGAT CAGTGTGCTTCAGCGCAAAGGGATCAGTCGATATGAAGGGATTCTGGCCAATGGTGTTCTTTCGAGGGATGGTTCCCTGTCAGACAAGCG ATTTCTGTTTACCTCCAATGGTTGCAGCAGATCCTTGAGTTTTGAACCTGACGGGCAAATCAGAGCTTCTTCCTCATGGCAGTCGGTCAA TGAGAGTGGAGACCAAGTTCACTGGTCTCCTGGCCAAGCCCGACTTCAGGACCAAGGCCCATCATGGGCTTCGGGCGACAGTAGCAACAA CCACAAACCACGAGAGTGGCTGGAGATCGATTTGGGGGAGAAAAAGAAAATAACAGGAATTAGGACCACAGGATCTACACAGTCGAACTT CAACTTTTATGTTAAGAGTTTTGTGATGAACTTCAAAAACAATAATTCTAAGTGGAAGACCTATAAAGGAATTGTGAATAATGAAGAAAA GGTGTTTCAGGGTAACTCTAACTTTCGGGACCCAGTGCAAAACAATTTCATCCCTCCCATCGTGGCCAGATATGTGCGGGTTGTCCCCCA GACATGGCACCAGAGGATAGCCTTGAAGGTGGAGCTCATTGGTTGCCAGATTACACAAGGTAATGATTCATTGGTGTGGCGCAAGACAAG TCAAAGCACCAGTGTTTCAACTAAGAAAGAAGATGAGACAATCACAAGGCCCATCCCCTCGGAAGAAACATCCACAGGAATAAACATTAC AACGGTGGCTATTCCATTGGTGCTCCTTGTTGTCCTGGTGTTTGCTGGAATGGGGATCTTTGCAGCCTTTAGAAAGAAGAAGAAGAAAGG AAGTCCGTATGGATCAGCAGAGGCTCAGAAAACAGACTGTTGGAAGCAGATTAAATATCCCTTTGCCAGACATCAGTCAGCTGAGTTTAC CATCAGCTATGATAATGAGAAGGAGATGACACAAAAGTTAGATCTCATCACAAGTGATATGGCAGGTTAACTCCGTTGACTGCCAAAATA GCATCCCCAACGTGCAGCCCTCCGCATCTATCAGCAGGTTGCCCCGGATGGATCTCAGAGATGAGGATTGGAACACCATGTTCTTTCCCA CCCTAACAACAACAAAGGGCAGTAAATTAAAGTACTCTTTGTAAGGTACAGTTACCGATTAATCTAGAGATAAAATATTTTCTTAAAAAT >In-frame_ENST00000532069_ENST00000296955_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(amino acids)=341AA_start in transcript=214_stop in transcript=1239 MCKAAIHAGIIADELGGQISVLQRKGISRYEGILANGVLSRDGSLSDKRFLFTSNGCSRSLSFEPDGQIRASSSWQSVNESGDQVHWSPG QARLQDQGPSWASGDSSNNHKPREWLEIDLGEKKKITGIRTTGSTQSNFNFYVKSFVMNFKNNNSKWKTYKGIVNNEEKVFQGNSNFRDP VQNNFIPPIVARYVRVVPQTWHQRIALKVELIGCQITQGNDSLVWRKTSQSTSVSTKKEDETITRPIPSEETSTGINITTVAIPLVLLVV -------------------------------------------------------------- >In-frame_ENST00000532069_ENST00000338728_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(transcript)=3126nt_BP=205nt CTCTTCCAGGGCGGGCGGTGTGGTGCACGCATTGCTGTGCTCCAACTCCCTCAGGGCCTGTGTTGCCGCACTCTGCTGCTATGAGCTTCC TCAAAAGTTTCCCGCCGCCTGGGCCAGCGGAGGGGCTCCTGCGGCAGCAGCCAGACACTGAGGCTGTGCTGAACGGGAAGGGCCTCGGCA CTGGTACCCTTTACATCGCTGAGAGACCTCTTTATTGTGCAAAGCTGCCATCCATGCAGGAATAATTGCTGATGAACTAGGTGGCCAGAT CAGTGTGCTTCAGCGCAAAGGGATCAGTCGATATGAAGGGATTCTGGCCAATGGTGTTCTTTCGAGGGATGGTTCCCTGTCAGACAAGCG ATTTCTGTTTACCTCCAATGGTTGCAGCAGATCCTTGAGTTTTGAACCTGACGGGCAAATCAGAGCTTCTTCCTCATGGCAGTCGGTCAA TGAGAGTGGAGACCAAGTTCACTGGTCTCCTGGCCAAGCCCGACTTCAGGACCAAGGCCCATCATGGGCTTCGGGCGACAGTAGCAACAA CCACAAACCACGAGAGTGGCTGGAGATCGATTTGGGGGAGAAAAAGAAAATAACAGGAATTAGGACCACAGGATCTACACAGTCGAACTT CAACTTTTATGTTAAGAGTTTTGTGATGAACTTCAAAAACAATAATTCTAAGTGGAAGACCTATAAAGGAATTGTGAATAATGAAGAAAA GGTGTTTCAGGGTAACTCTAACTTTCGGGACCCAGTGCAAAACAATTTCATCCCTCCCATCGTGGCCAGATATGTGCGGGTTGTCCCCCA GACATGGCACCAGAGGATAGCCTTGAAGGTGGAGCTCATTGGTTGCCAGATTACACAAGGTAATGATTCATTGGTGTGGCGCAAGACAAG TCAAAGCACCAGTGTTTCAACTAAGAAAGAAGATGAGACAATCACAAGGCCCATCCCCTCGGAAGAAACATCCACAGGAATAAACATTAC AACGGTGGCTATTCCATTGGTGCTCCTTGTTGTCCTGGTGTTTGCTGGAATGGGGATCTTTGCAGCCTTTAGAAAGAAGAAGAAGAAAGG AAGTCCGTATGGATCAGCAGAGGCTCAGAAAACAGACTGTTGGAAGCAGATTAAATATCCCTTTGCCAGACATCAGTCAGCTGAGTTTAC CATCAGCTATGATAATGAGAAGGAGATGACACAAAAGTTAGATCTCATCACAAGTGATATGGCAGATTACCAGCAGCCCCTCATGATTGG CACCGGGACAGTCACGAGGAAGGGCTCCACCTTCCGGCCCATGGACACGGATGCCGAGGAGGCAGGGGTGAGCACCGATGCCGGCGGCCA CTATGACTGCCCGCAGCGGGCCGGCCGCCACGAGTACGCGCTGCCCCTGGCGCCCCCGGAGCCCGAGTACGCCACGCCCATCGTGGAGCG GCACGTGCTGCGCGCCCACACGTTCTCTGCGCAGAGCGGCTACCGCGTCCCAGGGCCCCAGCCCGGCCACAAACACTCCCTCTCCTCGGG CGGCTTCTCCCCCGTAGCGGGTGTGGGCGCCCAGGACGGAGACTATCAAAGGCCACACAGCGCACAGCCTGCGGACAGGGGCTACGACCG GCCCAAAGCTGTCAGCGCCCTCGCCACCGAAAGCGGGCACCCTGACTCTCAGAAGCCCCCAACGCATCCCGGGACGAGTGACAGCTATTC TGCCCCCAGAGACTGCCTCACACCCCTCAACCAGACGGCCATGACTGCCCTTTTGTGAACACAATGTGAAAGAAGCCTGCTGTGGTACTG AGCGTCGGGCTGTCACAAGGCACTGGAAGAAGGGAGCCTGCTGGTCCAGAGTGTGCGTGTGTATCGGTGTGTGTGTACACTTGCATGTGT GTGTGTGATCCAGTAGGATCCTAGAGACAACCTGTCATACTGTTTACAAAATTGTGCAGCTGGTTTCGTGCTGACCCTTAGGGTGCGTCT GTTGGGTTTTGTTGGGCTAGAAAAATGAAAATTTTCAGATGGCGTTTTCATTCCTCTGACTGATATTGAGCTGCTTTGGTGTTAAAGGTG TAATGTGTACAGAGTTGTATTTAACAATAATAAAAGTAACTTAAGTTTGCTCTATCAGATTTTAGTTCTGCACAGAGGTTAAGTGGGAAA ATGCAGCTGTTGCAAAATGTATATAAATAGTATGTTCATTTTTTTCAGTATATTATCTGATACTGTGTTAGCAGCAGGTCTGCTTAAACC TAGTCTTGTTGTTATTGAGTCATTTCCTCTCCTTTGATAACTAGAACTGAAAGCATTTTTAACATTCTTCTCCTGGAAGAAATGAATTAC TTGAAGCATGAAAAGCACACCAGGGTGGTTGTTTATTTAGCAATTATGACTGTAGATTTAAAAACAAGCAAAGAAACAACACCTCAGCAG CTGCCCGTTTCCTTAGTCTCCACTTCAGAGGGGGATGCGAAGAGGTCGGCCCAGCTCCGGTGACCATGAAGGTGGCACAGGAATTACAGT GTGAATGGCTGTGTCAGATGTTTTCGTACCTCAGATTAAAAATATTGCTGAGGTCAGACGCCACAATTTTCATGACTTTCTTCAGAAGTA GCACATTTTCGTGACTTCCGCTGTCCTCTGAAAAACAAAGTTATTTGGAACATGTTCATGCAAAAGTGATTCTGACCAAGTCTAAATCGA GCTTTTCTACTGACATGAAACTGTTGGAAACTGATCTCATTTTATAAGAAATGATTTTCCCCTCAAGGAGGCGTCTGTAATTCCAGAACA GTCCAGACATCAGCTGTACCTCATGCTCAGTAGTTTTTATTTGAGTTTCTTTTGTGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAA AGAGGGAAGTGTGTGTGTTTTTTTAATAGAAAATATGGACCAAAAATTTTTTTCCCTGAAGAATGTATTATAACCCTATTTGTGTGGTTA TTACATCCTGTGAAATGTATATATGTTAAAATAATGGGGGTGCTGGAAGGTCATGGCAGACTAGCTGCTGGTTAGTGTGGAGGGGAAATG >In-frame_ENST00000532069_ENST00000338728_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(amino acids)=517AA_start in transcript=214_stop in transcript=1767 MCKAAIHAGIIADELGGQISVLQRKGISRYEGILANGVLSRDGSLSDKRFLFTSNGCSRSLSFEPDGQIRASSSWQSVNESGDQVHWSPG QARLQDQGPSWASGDSSNNHKPREWLEIDLGEKKKITGIRTTGSTQSNFNFYVKSFVMNFKNNNSKWKTYKGIVNNEEKVFQGNSNFRDP VQNNFIPPIVARYVRVVPQTWHQRIALKVELIGCQITQGNDSLVWRKTSQSTSVSTKKEDETITRPIPSEETSTGINITTVAIPLVLLVV LVFAGMGIFAAFRKKKKKGSPYGSAEAQKTDCWKQIKYPFARHQSAEFTISYDNEKEMTQKLDLITSDMADYQQPLMIGTGTVTRKGSTF RPMDTDAEEAGVSTDAGGHYDCPQRAGRHEYALPLAPPEPEYATPIVERHVLRAHTFSAQSGYRVPGPQPGHKHSLSSGGFSPVAGVGAQ -------------------------------------------------------------- >In-frame_ENST00000528364_ENST00000368503_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(transcript)=1153nt_BP=187nt TGTGGTGCACGCATTGCTGTGCTCCAACTCCCTCAGGGCCTGTGTTGCCGCACTCTGCTGCTATGAGCTTCCTCAAAAGTTTCCCGCCGC CTGGGCCAGCGGAGGGGCTCCTGCGGCAGCAGCCAGACACTGAGGCTGTGCTGAACGGGAAGGGCCTCGGCACTGGTACCCTTTACATCG CTGAGAGACCTCTTTATTGTGCAAAGCTGCCATCCATGCAGGAATAATTGCTGATGAACTAGGTGGCCAGATCAGTGTGCTTCAGCGCAA AGGGATCAGTCGATATGAAGGGATTCTGGCCAATGGTGTTCTTTCGAGGGATGGTTCCCTGTCAGACAAGCGATTTCTGTTTACCTCCAA TGGAATAAACATTACAACGGTGGCTATTCCATTGGTGCTCCTTGTTGTCCTGGTGTTTGCTGGAATGGGGATCTTTGCAGCCTTTAGAAA GAAGAAGAAGAAAGGAAGTCCGTATGGATCAGCAGAGGCTCAGAAAACAGACTGTTGGAAGCAGATTAAATATCCCTTTGCCAGACATCA GTCAGCTGAGTTTACCATCAGCTATGATAATGAGAAGGAGATGACACAAAAGTTAGATCTCATCACAAGTGATATGGCAGATTACCAGCA GCCCCTCATGATTGGCACCGGGACAGTCACGAGGAAGGGCTCCACCTTCCGGCCCATGGACACGGATGCCGAGGAGGCAGGGGTGAGCAC CGATGCCGGCGGCCACTATGACTGCCCGCAGCGGGCCGGCCGCCACGAGTACGCGCTGCCCCTGGCGCCCCCGGAGCCCGAGTACGCCAC GCCCATCGTGGAGCGGCACGTGCTGCGCGCCCACACGTTCTCTGCGCAGAGCGGCTACCGCGTCCCAGGGCCCCAGCCCGGCCACAAACA CTCCCTCTCCTCGGGCGGCTTCTCCCCCGTAGCGGGTGTGGGCGCCCAGGACGGAGACTATCAAAGGCCACACAGCGCACAGCCTGCGGA CAGGGGCTACGACCGGCCCAAAGCTGTCAGCGCCCTCGCCACCGAAAGCGGGCACCCTGACTCTCAGAAGCCCCCAACGCATCCCGGGAC >In-frame_ENST00000528364_ENST00000368503_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(amino acids)=319AA_start in transcript=196_stop in transcript=1152 MCKAAIHAGIIADELGGQISVLQRKGISRYEGILANGVLSRDGSLSDKRFLFTSNGINITTVAIPLVLLVVLVFAGMGIFAAFRKKKKKG SPYGSAEAQKTDCWKQIKYPFARHQSAEFTISYDNEKEMTQKLDLITSDMADYQQPLMIGTGTVTRKGSTFRPMDTDAEEAGVSTDAGGH YDCPQRAGRHEYALPLAPPEPEYATPIVERHVLRAHTFSAQSGYRVPGPQPGHKHSLSSGGFSPVAGVGAQDGDYQRPHSAQPADRGYDR -------------------------------------------------------------- >In-frame_ENST00000528364_ENST00000296955_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(transcript)=1456nt_BP=187nt TGTGGTGCACGCATTGCTGTGCTCCAACTCCCTCAGGGCCTGTGTTGCCGCACTCTGCTGCTATGAGCTTCCTCAAAAGTTTCCCGCCGC CTGGGCCAGCGGAGGGGCTCCTGCGGCAGCAGCCAGACACTGAGGCTGTGCTGAACGGGAAGGGCCTCGGCACTGGTACCCTTTACATCG CTGAGAGACCTCTTTATTGTGCAAAGCTGCCATCCATGCAGGAATAATTGCTGATGAACTAGGTGGCCAGATCAGTGTGCTTCAGCGCAA AGGGATCAGTCGATATGAAGGGATTCTGGCCAATGGTGTTCTTTCGAGGGATGGTTCCCTGTCAGACAAGCGATTTCTGTTTACCTCCAA TGGTTGCAGCAGATCCTTGAGTTTTGAACCTGACGGGCAAATCAGAGCTTCTTCCTCATGGCAGTCGGTCAATGAGAGTGGAGACCAAGT TCACTGGTCTCCTGGCCAAGCCCGACTTCAGGACCAAGGCCCATCATGGGCTTCGGGCGACAGTAGCAACAACCACAAACCACGAGAGTG GCTGGAGATCGATTTGGGGGAGAAAAAGAAAATAACAGGAATTAGGACCACAGGATCTACACAGTCGAACTTCAACTTTTATGTTAAGAG TTTTGTGATGAACTTCAAAAACAATAATTCTAAGTGGAAGACCTATAAAGGAATTGTGAATAATGAAGAAAAGGTGTTTCAGGGTAACTC TAACTTTCGGGACCCAGTGCAAAACAATTTCATCCCTCCCATCGTGGCCAGATATGTGCGGGTTGTCCCCCAGACATGGCACCAGAGGAT AGCCTTGAAGGTGGAGCTCATTGGTTGCCAGATTACACAAGGTAATGATTCATTGGTGTGGCGCAAGACAAGTCAAAGCACCAGTGTTTC AACTAAGAAAGAAGATGAGACAATCACAAGGCCCATCCCCTCGGAAGAAACATCCACAGGAATAAACATTACAACGGTGGCTATTCCATT GGTGCTCCTTGTTGTCCTGGTGTTTGCTGGAATGGGGATCTTTGCAGCCTTTAGAAAGAAGAAGAAGAAAGGAAGTCCGTATGGATCAGC AGAGGCTCAGAAAACAGACTGTTGGAAGCAGATTAAATATCCCTTTGCCAGACATCAGTCAGCTGAGTTTACCATCAGCTATGATAATGA GAAGGAGATGACACAAAAGTTAGATCTCATCACAAGTGATATGGCAGGTTAACTCCGTTGACTGCCAAAATAGCATCCCCAACGTGCAGC CCTCCGCATCTATCAGCAGGTTGCCCCGGATGGATCTCAGAGATGAGGATTGGAACACCATGTTCTTTCCCACCCTAACAACAACAAAGG GCAGTAAATTAAAGTACTCTTTGTAAGGTACAGTTACCGATTAATCTAGAGATAAAATATTTTCTTAAAAATATATTTCATTAAACACCT >In-frame_ENST00000528364_ENST00000296955_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(amino acids)=341AA_start in transcript=196_stop in transcript=1221 MCKAAIHAGIIADELGGQISVLQRKGISRYEGILANGVLSRDGSLSDKRFLFTSNGCSRSLSFEPDGQIRASSSWQSVNESGDQVHWSPG QARLQDQGPSWASGDSSNNHKPREWLEIDLGEKKKITGIRTTGSTQSNFNFYVKSFVMNFKNNNSKWKTYKGIVNNEEKVFQGNSNFRDP VQNNFIPPIVARYVRVVPQTWHQRIALKVELIGCQITQGNDSLVWRKTSQSTSVSTKKEDETITRPIPSEETSTGINITTVAIPLVLLVV -------------------------------------------------------------- >In-frame_ENST00000528364_ENST00000338728_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(transcript)=3108nt_BP=187nt TGTGGTGCACGCATTGCTGTGCTCCAACTCCCTCAGGGCCTGTGTTGCCGCACTCTGCTGCTATGAGCTTCCTCAAAAGTTTCCCGCCGC CTGGGCCAGCGGAGGGGCTCCTGCGGCAGCAGCCAGACACTGAGGCTGTGCTGAACGGGAAGGGCCTCGGCACTGGTACCCTTTACATCG CTGAGAGACCTCTTTATTGTGCAAAGCTGCCATCCATGCAGGAATAATTGCTGATGAACTAGGTGGCCAGATCAGTGTGCTTCAGCGCAA AGGGATCAGTCGATATGAAGGGATTCTGGCCAATGGTGTTCTTTCGAGGGATGGTTCCCTGTCAGACAAGCGATTTCTGTTTACCTCCAA TGGTTGCAGCAGATCCTTGAGTTTTGAACCTGACGGGCAAATCAGAGCTTCTTCCTCATGGCAGTCGGTCAATGAGAGTGGAGACCAAGT TCACTGGTCTCCTGGCCAAGCCCGACTTCAGGACCAAGGCCCATCATGGGCTTCGGGCGACAGTAGCAACAACCACAAACCACGAGAGTG GCTGGAGATCGATTTGGGGGAGAAAAAGAAAATAACAGGAATTAGGACCACAGGATCTACACAGTCGAACTTCAACTTTTATGTTAAGAG TTTTGTGATGAACTTCAAAAACAATAATTCTAAGTGGAAGACCTATAAAGGAATTGTGAATAATGAAGAAAAGGTGTTTCAGGGTAACTC TAACTTTCGGGACCCAGTGCAAAACAATTTCATCCCTCCCATCGTGGCCAGATATGTGCGGGTTGTCCCCCAGACATGGCACCAGAGGAT AGCCTTGAAGGTGGAGCTCATTGGTTGCCAGATTACACAAGGTAATGATTCATTGGTGTGGCGCAAGACAAGTCAAAGCACCAGTGTTTC AACTAAGAAAGAAGATGAGACAATCACAAGGCCCATCCCCTCGGAAGAAACATCCACAGGAATAAACATTACAACGGTGGCTATTCCATT GGTGCTCCTTGTTGTCCTGGTGTTTGCTGGAATGGGGATCTTTGCAGCCTTTAGAAAGAAGAAGAAGAAAGGAAGTCCGTATGGATCAGC AGAGGCTCAGAAAACAGACTGTTGGAAGCAGATTAAATATCCCTTTGCCAGACATCAGTCAGCTGAGTTTACCATCAGCTATGATAATGA GAAGGAGATGACACAAAAGTTAGATCTCATCACAAGTGATATGGCAGATTACCAGCAGCCCCTCATGATTGGCACCGGGACAGTCACGAG GAAGGGCTCCACCTTCCGGCCCATGGACACGGATGCCGAGGAGGCAGGGGTGAGCACCGATGCCGGCGGCCACTATGACTGCCCGCAGCG GGCCGGCCGCCACGAGTACGCGCTGCCCCTGGCGCCCCCGGAGCCCGAGTACGCCACGCCCATCGTGGAGCGGCACGTGCTGCGCGCCCA CACGTTCTCTGCGCAGAGCGGCTACCGCGTCCCAGGGCCCCAGCCCGGCCACAAACACTCCCTCTCCTCGGGCGGCTTCTCCCCCGTAGC GGGTGTGGGCGCCCAGGACGGAGACTATCAAAGGCCACACAGCGCACAGCCTGCGGACAGGGGCTACGACCGGCCCAAAGCTGTCAGCGC CCTCGCCACCGAAAGCGGGCACCCTGACTCTCAGAAGCCCCCAACGCATCCCGGGACGAGTGACAGCTATTCTGCCCCCAGAGACTGCCT CACACCCCTCAACCAGACGGCCATGACTGCCCTTTTGTGAACACAATGTGAAAGAAGCCTGCTGTGGTACTGAGCGTCGGGCTGTCACAA GGCACTGGAAGAAGGGAGCCTGCTGGTCCAGAGTGTGCGTGTGTATCGGTGTGTGTGTACACTTGCATGTGTGTGTGTGATCCAGTAGGA TCCTAGAGACAACCTGTCATACTGTTTACAAAATTGTGCAGCTGGTTTCGTGCTGACCCTTAGGGTGCGTCTGTTGGGTTTTGTTGGGCT AGAAAAATGAAAATTTTCAGATGGCGTTTTCATTCCTCTGACTGATATTGAGCTGCTTTGGTGTTAAAGGTGTAATGTGTACAGAGTTGT ATTTAACAATAATAAAAGTAACTTAAGTTTGCTCTATCAGATTTTAGTTCTGCACAGAGGTTAAGTGGGAAAATGCAGCTGTTGCAAAAT GTATATAAATAGTATGTTCATTTTTTTCAGTATATTATCTGATACTGTGTTAGCAGCAGGTCTGCTTAAACCTAGTCTTGTTGTTATTGA GTCATTTCCTCTCCTTTGATAACTAGAACTGAAAGCATTTTTAACATTCTTCTCCTGGAAGAAATGAATTACTTGAAGCATGAAAAGCAC ACCAGGGTGGTTGTTTATTTAGCAATTATGACTGTAGATTTAAAAACAAGCAAAGAAACAACACCTCAGCAGCTGCCCGTTTCCTTAGTC TCCACTTCAGAGGGGGATGCGAAGAGGTCGGCCCAGCTCCGGTGACCATGAAGGTGGCACAGGAATTACAGTGTGAATGGCTGTGTCAGA TGTTTTCGTACCTCAGATTAAAAATATTGCTGAGGTCAGACGCCACAATTTTCATGACTTTCTTCAGAAGTAGCACATTTTCGTGACTTC CGCTGTCCTCTGAAAAACAAAGTTATTTGGAACATGTTCATGCAAAAGTGATTCTGACCAAGTCTAAATCGAGCTTTTCTACTGACATGA AACTGTTGGAAACTGATCTCATTTTATAAGAAATGATTTTCCCCTCAAGGAGGCGTCTGTAATTCCAGAACAGTCCAGACATCAGCTGTA CCTCATGCTCAGTAGTTTTTATTTGAGTTTCTTTTGTGAGTTAACTATGGGAGATTTAACCTCTTTTGCCAAAGAGGGAAGTGTGTGTGT TTTTTTAATAGAAAATATGGACCAAAAATTTTTTTCCCTGAAGAATGTATTATAACCCTATTTGTGTGGTTATTACATCCTGTGAAATGT ATATATGTTAAAATAATGGGGGTGCTGGAAGGTCATGGCAGACTAGCTGCTGGTTAGTGTGGAGGGGAAATGGTTTACTTTGTAGAGTTT >In-frame_ENST00000528364_ENST00000338728_TCGA-CV-6933-01A_CLNS1A_chr11_77348635_-_DCBLD1_chr6_117853423_length(amino acids)=517AA_start in transcript=196_stop in transcript=1749 MCKAAIHAGIIADELGGQISVLQRKGISRYEGILANGVLSRDGSLSDKRFLFTSNGCSRSLSFEPDGQIRASSSWQSVNESGDQVHWSPG QARLQDQGPSWASGDSSNNHKPREWLEIDLGEKKKITGIRTTGSTQSNFNFYVKSFVMNFKNNNSKWKTYKGIVNNEEKVFQGNSNFRDP VQNNFIPPIVARYVRVVPQTWHQRIALKVELIGCQITQGNDSLVWRKTSQSTSVSTKKEDETITRPIPSEETSTGINITTVAIPLVLLVV LVFAGMGIFAAFRKKKKKGSPYGSAEAQKTDCWKQIKYPFARHQSAEFTISYDNEKEMTQKLDLITSDMADYQQPLMIGTGTVTRKGSTF RPMDTDAEEAGVSTDAGGHYDCPQRAGRHEYALPLAPPEPEYATPIVERHVLRAHTFSAQSGYRVPGPQPGHKHSLSSGGFSPVAGVGAQ -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for CLNS1A-DCBLD1 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for CLNS1A-DCBLD1 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for CLNS1A-DCBLD1 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Hgene | CLNS1A | C0025202 | melanoma | 1 | CTD_human |
| Tgene | DCBLD1 | C0025202 | melanoma | 1 | CTD_human |
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