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	Fusion Gene Summary
	Fusion Gene ORF analysis
	Fusion Genomic Features
	Fusion Protein Features
	Fusion Gene Sequence
	Fusion Gene PPI analysis
	Related Drugs
	Related Diseases

Fusion gene:CPNE2-NUP93 (FusionGDB2 ID:19047)

Fusion Gene Summary for CPNE2-NUP93

Fusion gene summary

Fusion gene information	Fusion gene name: CPNE2-NUP93
	Fusion gene ID: 19047
		Hgene	Tgene
	Gene symbol	CPNE2	NUP93
	Gene ID	221184	9688
	Gene name	copine 2	nucleoporin 93
	Synonyms	COPN2\|CPN2	NIC96
	Cytomap	16q13	16q13
	Type of gene	protein-coding	protein-coding
	Description	copine-2copine II	nuclear pore complex protein Nup9393 kDa nucleoporinnucleoporin 93kDanucleoporin Nup93
	Modification date	20200313	20200329
	UniProtAcc	.	.
	Ensembl transtripts involved in fusion gene	ENST00000290776, ENST00000537605, ENST00000535318, ENST00000565874, ENST00000565951,	ENST00000308159, ENST00000569842, ENST00000564887, ENST00000569595, ENST00000542526,
Fusion gene scores	* DoF score	9 X 6 X 5=270	13 X 15 X 8=1560
	# samples	11	17
	** MAII score	log2(11/270*10)=-1.29545588352617 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0	log2(17/1560*10)=-3.19793937761191 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0
Context	PubMed: CPNE2 [Title/Abstract] AND NUP93 [Title/Abstract] AND fusion [Title/Abstract]
Most frequent breakpoint	CPNE2(57171194)-NUP93(56857618), # samples:1 CPNE2(57171194)-NUP93(56857619), # samples:1
Anticipated loss of major functional domain due to fusion event.

* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Partner	Gene	GO ID	GO term	PubMed ID
Tgene	NUP93	GO:0006998	nuclear envelope organization	26878725
Tgene	NUP93	GO:0051292	nuclear pore complex assembly	26878725
Tgene	NUP93	GO:0060391	positive regulation of SMAD protein signal transduction	26878725
Tgene	NUP93	GO:0060395	SMAD protein signal transduction	26878725

Fusion gene breakpoints across CPNE2 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

Fusion gene breakpoints across NUP93 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.

Source	Disease	Sample	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand
ChimerDB4	UCEC	TCGA-BS-A0U9	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+
ChimerDB4	UCEC	TCGA-BS-A0U9-01B	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+

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Fusion Gene ORF analysis for CPNE2-NUP93

Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.

ORF	Henst	Tenst	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand
In-frame	ENST00000290776	ENST00000308159	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+
In-frame	ENST00000290776	ENST00000569842	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+
In-frame	ENST00000290776	ENST00000564887	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+
5CDS-intron	ENST00000290776	ENST00000569595	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+
5CDS-intron	ENST00000290776	ENST00000542526	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+
In-frame	ENST00000537605	ENST00000308159	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+
In-frame	ENST00000537605	ENST00000569842	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+
In-frame	ENST00000537605	ENST00000564887	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+
5CDS-intron	ENST00000537605	ENST00000569595	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+
5CDS-intron	ENST00000537605	ENST00000542526	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+
In-frame	ENST00000535318	ENST00000308159	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+
In-frame	ENST00000535318	ENST00000569842	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+
In-frame	ENST00000535318	ENST00000564887	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+
5CDS-intron	ENST00000535318	ENST00000569595	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+
5CDS-intron	ENST00000535318	ENST00000542526	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+
In-frame	ENST00000565874	ENST00000308159	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+
In-frame	ENST00000565874	ENST00000569842	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+
In-frame	ENST00000565874	ENST00000564887	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+
5CDS-intron	ENST00000565874	ENST00000569595	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+
5CDS-intron	ENST00000565874	ENST00000542526	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+
intron-3CDS	ENST00000565951	ENST00000308159	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+
intron-3CDS	ENST00000565951	ENST00000569842	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+
intron-3CDS	ENST00000565951	ENST00000564887	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+
intron-intron	ENST00000565951	ENST00000569595	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+
intron-intron	ENST00000565951	ENST00000542526	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+
In-frame	ENST00000290776	ENST00000308159	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+
In-frame	ENST00000290776	ENST00000569842	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+
In-frame	ENST00000290776	ENST00000564887	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+
5CDS-intron	ENST00000290776	ENST00000569595	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+
5CDS-intron	ENST00000290776	ENST00000542526	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+
In-frame	ENST00000537605	ENST00000308159	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+
In-frame	ENST00000537605	ENST00000569842	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+
In-frame	ENST00000537605	ENST00000564887	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+
5CDS-intron	ENST00000537605	ENST00000569595	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+
5CDS-intron	ENST00000537605	ENST00000542526	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+
In-frame	ENST00000535318	ENST00000308159	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+
In-frame	ENST00000535318	ENST00000569842	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+
In-frame	ENST00000535318	ENST00000564887	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+
5CDS-intron	ENST00000535318	ENST00000569595	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+
5CDS-intron	ENST00000535318	ENST00000542526	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+
In-frame	ENST00000565874	ENST00000308159	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+
In-frame	ENST00000565874	ENST00000569842	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+
In-frame	ENST00000565874	ENST00000564887	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+
5CDS-intron	ENST00000565874	ENST00000569595	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+
5CDS-intron	ENST00000565874	ENST00000542526	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+
intron-3CDS	ENST00000565951	ENST00000308159	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+
intron-3CDS	ENST00000565951	ENST00000569842	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+
intron-3CDS	ENST00000565951	ENST00000564887	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+
intron-intron	ENST00000565951	ENST00000569595	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+
intron-intron	ENST00000565951	ENST00000542526	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+

ORFfinder result based on the fusion transcript sequence of in-frame fusion genes.

Henst	Tenst	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand	Seq length (transcript)	BP loci (transcript)	Predicted start (transcript)	Predicted stop (transcript)	Seq length (amino acids)
ENST00000290776	CPNE2	chr16	57171194	+	ENST00000308159	NUP93	chr16	56857618	+	3557	1591	88	3396	1102
ENST00000290776	CPNE2	chr16	57171194	+	ENST00000569842	NUP93	chr16	56857618	+	3675	1591	88	3579	1163
ENST00000290776	CPNE2	chr16	57171194	+	ENST00000564887	NUP93	chr16	56857618	+	3552	1591	88	3396	1102
ENST00000537605	CPNE2	chr16	57171194	+	ENST00000308159	NUP93	chr16	56857618	+	3500	1534	31	3339	1102
ENST00000537605	CPNE2	chr16	57171194	+	ENST00000569842	NUP93	chr16	56857618	+	3618	1534	31	3522	1163
ENST00000537605	CPNE2	chr16	57171194	+	ENST00000564887	NUP93	chr16	56857618	+	3495	1534	31	3339	1102
ENST00000535318	CPNE2	chr16	57171194	+	ENST00000308159	NUP93	chr16	56857618	+	3629	1663	265	3468	1067
ENST00000535318	CPNE2	chr16	57171194	+	ENST00000569842	NUP93	chr16	56857618	+	3747	1663	265	3651	1128
ENST00000535318	CPNE2	chr16	57171194	+	ENST00000564887	NUP93	chr16	56857618	+	3624	1663	265	3468	1067
ENST00000565874	CPNE2	chr16	57171194	+	ENST00000308159	NUP93	chr16	56857618	+	3460	1494	132	3299	1055
ENST00000565874	CPNE2	chr16	57171194	+	ENST00000569842	NUP93	chr16	56857618	+	3578	1494	132	3482	1116
ENST00000565874	CPNE2	chr16	57171194	+	ENST00000564887	NUP93	chr16	56857618	+	3455	1494	132	3299	1055
ENST00000290776	CPNE2	chr16	57171194	+	ENST00000308159	NUP93	chr16	56857619	+	3557	1591	88	3396	1102
ENST00000290776	CPNE2	chr16	57171194	+	ENST00000569842	NUP93	chr16	56857619	+	3675	1591	88	3579	1163
ENST00000290776	CPNE2	chr16	57171194	+	ENST00000564887	NUP93	chr16	56857619	+	3552	1591	88	3396	1102
ENST00000537605	CPNE2	chr16	57171194	+	ENST00000308159	NUP93	chr16	56857619	+	3500	1534	31	3339	1102
ENST00000537605	CPNE2	chr16	57171194	+	ENST00000569842	NUP93	chr16	56857619	+	3618	1534	31	3522	1163
ENST00000537605	CPNE2	chr16	57171194	+	ENST00000564887	NUP93	chr16	56857619	+	3495	1534	31	3339	1102
ENST00000535318	CPNE2	chr16	57171194	+	ENST00000308159	NUP93	chr16	56857619	+	3629	1663	265	3468	1067
ENST00000535318	CPNE2	chr16	57171194	+	ENST00000569842	NUP93	chr16	56857619	+	3747	1663	265	3651	1128
ENST00000535318	CPNE2	chr16	57171194	+	ENST00000564887	NUP93	chr16	56857619	+	3624	1663	265	3468	1067
ENST00000565874	CPNE2	chr16	57171194	+	ENST00000308159	NUP93	chr16	56857619	+	3460	1494	132	3299	1055
ENST00000565874	CPNE2	chr16	57171194	+	ENST00000569842	NUP93	chr16	56857619	+	3578	1494	132	3482	1116
ENST00000565874	CPNE2	chr16	57171194	+	ENST00000564887	NUP93	chr16	56857619	+	3455	1494	132	3299	1055

DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.

Henst	Tenst	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand	No-coding score	Coding score
ENST00000290776	ENST00000308159	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+	0.002586467	0.9974136
ENST00000290776	ENST00000569842	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+	0.001995107	0.99800485
ENST00000290776	ENST00000564887	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+	0.002564725	0.9974353
ENST00000537605	ENST00000308159	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+	0.002244815	0.9977552
ENST00000537605	ENST00000569842	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+	0.00173918	0.9982608
ENST00000537605	ENST00000564887	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+	0.002228682	0.9977714
ENST00000535318	ENST00000308159	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+	0.002355824	0.9976441
ENST00000535318	ENST00000569842	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+	0.001816271	0.99818367
ENST00000535318	ENST00000564887	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+	0.00233657	0.9976635
ENST00000565874	ENST00000308159	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+	0.001944778	0.9980552
ENST00000565874	ENST00000569842	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+	0.001464749	0.9985353
ENST00000565874	ENST00000564887	CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+	0.001936938	0.998063
ENST00000290776	ENST00000308159	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+	0.002586467	0.9974136
ENST00000290776	ENST00000569842	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+	0.001995107	0.99800485
ENST00000290776	ENST00000564887	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+	0.002564725	0.9974353
ENST00000537605	ENST00000308159	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+	0.002244815	0.9977552
ENST00000537605	ENST00000569842	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+	0.00173918	0.9982608
ENST00000537605	ENST00000564887	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+	0.002228682	0.9977714
ENST00000535318	ENST00000308159	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+	0.002355824	0.9976441
ENST00000535318	ENST00000569842	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+	0.001816271	0.99818367
ENST00000535318	ENST00000564887	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+	0.00233657	0.9976635
ENST00000565874	ENST00000308159	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+	0.001944778	0.9980552
ENST00000565874	ENST00000569842	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+	0.001464749	0.9985353
ENST00000565874	ENST00000564887	CPNE2	chr16	57171194	+	NUP93	chr16	56857619	+	0.001936938	0.998063

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Fusion Genomic Features for CPNE2-NUP93

FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.

Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand	1-p	p (fusion gene breakpoint)
CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+	0.00024975	0.9997502
CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+	0.00024975	0.9997502
CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+	0.00024975	0.9997502
CPNE2	chr16	57171194	+	NUP93	chr16	56857618	+	0.00024975	0.9997502

Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for CPNE2-NUP93

Go to
FGviewer for the breakpoints of chr16:57171194-chr16:56857618
.
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.

Main function of each fusion partner protein. (from UniProt)

Hgene	Tgene
.	.
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.	FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.

Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at
download page

* Minus value of BPloci means that the break pointn is located before the CDS.

- In-frame and retained protein feature among the 13 regional features.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Protein feature

Protein feature note

Hgene

CPNE2

chr16:57171194

chr16:56857618

ENST00000290776

138_263

434.0

549.0

Domain

C2 2

Hgene

CPNE2

chr16:57171194

chr16:56857618

ENST00000290776

5_131

434.0

549.0

Domain

C2 1

Hgene

CPNE2

chr16:57171194

chr16:56857618

ENST00000535318

138_263

434.0

549.0

Domain

C2 2

Hgene

CPNE2

chr16:57171194

chr16:56857618

ENST00000535318

5_131

434.0

549.0

Domain

C2 1

Hgene

CPNE2

chr16:57171194

chr16:56857618

ENST00000565874

138_263

434.0

549.0

Domain

C2 2

Hgene

CPNE2

chr16:57171194

chr16:56857618

ENST00000565874

5_131

434.0

549.0

Domain

C2 1

Hgene

CPNE2

chr16:57171194

chr16:56857619

ENST00000290776

138_263

434.0

549.0

Domain

C2 2

Hgene

CPNE2

chr16:57171194

chr16:56857619

ENST00000290776

5_131

434.0

549.0

Domain

C2 1

Hgene

CPNE2

chr16:57171194

chr16:56857619

ENST00000535318

138_263

434.0

549.0

Domain

C2 2

Hgene

CPNE2

chr16:57171194

chr16:56857619

ENST00000535318

5_131

434.0

549.0

Domain

C2 1

Hgene

CPNE2

chr16:57171194

chr16:56857619

ENST00000565874

138_263

434.0

549.0

Domain

C2 2

Hgene

CPNE2

chr16:57171194

chr16:56857619

ENST00000565874

5_131

434.0

549.0

Domain

C2 1

Hgene

CPNE2

chr16:57171194

chr16:56857618

ENST00000290776

247_304

434.0

549.0

Region

Linker region

Hgene

CPNE2

chr16:57171194

chr16:56857618

ENST00000535318

247_304

434.0

549.0

Region

Linker region

Hgene

CPNE2

chr16:57171194

chr16:56857618

ENST00000565874

247_304

434.0

549.0

Region

Linker region

Hgene

CPNE2

chr16:57171194

chr16:56857619

ENST00000290776

247_304

434.0

549.0

Region

Linker region

Hgene

CPNE2

chr16:57171194

chr16:56857619

ENST00000535318

247_304

434.0

549.0

Region

Linker region

Hgene

CPNE2

chr16:57171194

chr16:56857619

ENST00000565874

247_304

434.0

549.0

Region

Linker region

- In-frame and not-retained protein feature among the 13 regional features.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Protein feature

Protein feature note

Hgene

CPNE2

chr16:57171194

chr16:56857618

ENST00000290776

305_507

434.0

549.0

Domain

VWFA

Hgene

CPNE2

chr16:57171194

chr16:56857618

ENST00000535318

305_507

434.0

549.0

Domain

VWFA

Hgene

CPNE2

chr16:57171194

chr16:56857618

ENST00000565874

305_507

434.0

549.0

Domain

VWFA

Hgene

CPNE2

chr16:57171194

chr16:56857619

ENST00000290776

305_507

434.0

549.0

Domain

VWFA

Hgene

CPNE2

chr16:57171194

chr16:56857619

ENST00000535318

305_507

434.0

549.0

Domain

VWFA

Hgene

CPNE2

chr16:57171194

chr16:56857619

ENST00000565874

305_507

434.0

549.0

Domain

VWFA

Top

Fusion Gene Sequence for CPNE2-NUP93

For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.

>In-frame_ENST00000290776_ENST00000308159_TCGA-BS-A0U9_CPNE2_chr16_57171194_+_NUP93_chr16_56857618_length(transcript)=3557nt_BP=1591nt
CCCTCCTCGGCCGGAGGGAGGAGCCCGAGCCGCCGCCGCCGCCGCCGCCCGCCCGCCCGGCCCGGGAGGAGGACCGGACCCCGAGCGGCT
GGGAGCGCACGCGAGCGGGCCGTGGCCGCGCGGGCAGCGCCCTGAGCCTGTCCCGCGCCCGCGGGCCCGGCCGAGCAGGAGCAGCTCCCG
GGGATGCCCGGGCGGCTCGGAGCGCGGGCAGCGGCAGCCGTGCGGTGAGGGCGGTGGCGCCCGCGGGACCTGCGACTGCCAGGAACTCCT
GCCACCGCCACCGGCTCCCATGGCCCACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTGCGTGTG
CAAGGTGGAGCTGTCAGTGAGTGGCCAGAACCTACTGGACCGGGATGTTACCTCCAAGTCCGACCCCTTCTGTGTCCTCTTTACAGAGAA
CAATGGCAGATGGATCGAGTACGACAGGACAGAAACCGCGATCAACAACCTCAACCCCGCCTTCTCCAAGAAGTTCGTGCTTGACTACCA
CTTCGAGGAGGTACAGAAGCTCAAGTTCGCGCTCTTTGACCAGGACAAGTCCAGTATGCGGCTGGACGAGCATGACTTCCTGGGCCAGTT
CTCCTGCAGCCTGGGCACGATCGTCTCCAGCAAGAAGATCACTAGGCCTCTGCTGCTGCTGAATGACAAGCCTGCGGGGAAGGGCTTGAT
TACGATCGCTGCCCAGGAGCTGTCCGACAACCGCGTCATCACACTAAGCCTGGCGGGCAGGAGGCTGGACAAGAAGGACCTCTTTGGGAA
GTCAGACCCCTTTCTGGAGTTTTATAAGCCAGGAGACGATGGCAAGTGGATGCTGGTCCACAGGACTGAGGTGATCAAGTACACACTGGA
CCCTGTGTGGAAGCCATTCACAGTGCCCTTGGTGTCCCTGTGTGATGGGGACATGGAGAAGCCCATCCAGGTCATGTGCTACGACTATGA
CAATGACGGGGGCCATGACTTCATCGGCGAGTTCCAGACCTCAGTGTCACAGATGTGTGAGGCTCGAGACAGCGTCCCGCTGGAGTTCGA
GTGCATCAACCCCAAGAAGCAGAGGAAGAAGAAGAACTATAAAAACTCGGGCATCATCATCCTGCGATCCTGCAAGATAAACCGAGACTA
CTCCTTCCTTGACTACATCCTGGGAGGCTGCCAGCTCATGTTCACCGTTGGAATAGACTTTACAGCCTCCAACGGGAATCCCCTCGACCC
TTCCTCTTTGCACTATATCAACCCTATGGGCACCAACGAATATCTGTCGGCCATCTGGGCTGTTGGGCAGATCATTCAGGACTACGACAG
TGATAAGATGTTTCCAGCTCTGGGATTCGGGGCCCAGTTACCCCCAGACTGGAAGGTCTCCCATGAGTTTGCCATCAACTTCAACCCCAC
CAACCCCTTCTGCTCAGGTGTGGATGGTATTGCCCAGGCGTACTCAGCTTGCCTGCCCCACATCCGCTTCTACGGTCCTACCAATTTCTC
CCCCATCGTCAACCACGTGGCCCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGCCACGAGCATTTCCGACATGTGGACCATGGTAAA
ACAAATGACAGACGTGTTGTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGCGCATGGAGTTTGTCAGGCAGGC
CTTGGCGTACCTTGAGCAGAGTTATAAGAATTACACCCTTGTGACTGTCTTTGGAAATTTGCATCAGGCCCAGCTGGGCGGGGTGCCTGG
GACTTACCAATTGGTTCGAAGTTTCCTGAACATTAAACTGCCAGCTCCCTTGCCTGGACTACAGGATGGAGAGGTGGAAGGCCATCCTGT
GTGGGCGCTAATTTACTACTGCATGCGCTGTGGAGACCTGCTTGCCGCTTCACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAGTT
TAAAACCTGGTTCCAGGAGTACATGAACAGCAAGGACAGAAGATTGTCCCCAGCTACGGAAAACAAGCTCCGGCTGCATTACCGTAGGGC
CCTCAGGAACAATACAGATCCCTACAAGCGGGCCGTGTACTGTATCATTGGCAGATGTGACGTCACCGACAACCAGAGTGAAGTGGCGGA
CAAAACTGAGGATTACCTGTGGCTGAAGTTGAACCAAGTGTGTTTTGACGACGATGGCACCAGCTCCCCACAAGACAGGCTCACTCTCTC
ACAGTTCCAGAAGCAGTTGTTGGAAGACTATGGCGAGTCCCACTTTACGGTGAACCAGCAACCCTTCCTCTACTTCCAAGTCCTGTTCCT
GACAGCGCAGTTTGAAGCAGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCATGCTGTCCATGTAGCACTGGTGCTGTTTGA
GCTGAAGCTGCTTTTAAAGTCCTCTGGACAGAGTGCTCAGCTCCTCAGCCACGAGCCTGGTGACCCTCCTTGCTTGCGGCGGCTGAACTT
CGTGCGGCTCCTCATGCTGTACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGGCCCTCCAGTACTTCTATTTCCTCAGGGATGAGAA
AGATAGTCAAGGAGAAAACATGTTTCTGCGCTGTGTGAGTGAGCTTGTGATTGAAAGCCGAGAGTTCGATATGATTCTTGGGAAACTAGA
GAATGACGGAAGTAGAAAGCCTGGAGTCATAGATAAGTTTACTAGTGACACAAAGCCTATTATCAACAAAGTTGCTTCTGTGGCAGAAAA
TAAAGGACTGTTTGAAGAGGCAGCAAAGCTGTATGACCTTGCCAAGAATGCTGACAAGGTACTGGAGCTGATGAACAAACTGCTGAGCCC
TGTCGTCCCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGCACTCTCCATTGCCGAACGGTATAGGGCTCAAGG
AATAAGCGCAAATAAATTTGTGGACTCCACGTTCTATCTTCTTTTGGACTTGATCACCTTTTTTGACGAGTATCATAGTGGTCATATTGA
TAGAGCTTTTGATATCATTGAGCGCTTGAAGCTGGTGCCCCTGAATCAGGAAAGTGTGGAAGAGAGAGTGGCTGCCTTCAGAAATTTCAG
TGATGAAATCAGGCACAACCTCTCAGAAGTGCTTCTTGCCACCATGAACATCTTGTTCACACAGTTTAAGAGGCTCAAGGGGACAAGTCC
ATCCTCGTCATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACTCTCAACTCCGAAGTCAAGCCCGCACTCTGATTACCTTTGCTGGAAT
GATACCATACCGAACGTCTGGGGACACCAATGCGAGGCTGGTGCAGATGGAGGTCCTCATGAATTAAGTGCCATGCTTTGTGGGAGTCTG
GGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCACTAGGCTGGGGTTTCTGGTTTTGTTTCTGTTGTGTTTTGTTTTGGTTTCTGT

>In-frame_ENST00000290776_ENST00000308159_TCGA-BS-A0U9_CPNE2_chr16_57171194_+_NUP93_chr16_56857618_length(amino acids)=1102AA_start in transcript=88_stop in transcript=3396
MGAHASGPWPRGQRPEPVPRPRARPSRSSSRGCPGGSERGQRQPCGEGGGARGTCDCQELLPPPPAPMAHIPSGGAPAAGAAPMGPQYCV
CKVELSVSGQNLLDRDVTSKSDPFCVLFTENNGRWIEYDRTETAINNLNPAFSKKFVLDYHFEEVQKLKFALFDQDKSSMRLDEHDFLGQ
FSCSLGTIVSSKKITRPLLLLNDKPAGKGLITIAAQELSDNRVITLSLAGRRLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTL
DPVWKPFTVPLVSLCDGDMEKPIQVMCYDYDNDGGHDFIGEFQTSVSQMCEARDSVPLEFECINPKKQRKKKNYKNSGIIILRSCKINRD
YSFLDYILGGCQLMFTVGIDFTASNGNPLDPSSLHYINPMGTNEYLSAIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNP
TNPFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVNHVARFAAQATQQRTATSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQ
ALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGE
FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTL
SQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLN
FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAE
NKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
DRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTSPSSSSRPQRVIEDRDSQLRSQARTLITFAG

--------------------------------------------------------------
>In-frame_ENST00000290776_ENST00000569842_TCGA-BS-A0U9_CPNE2_chr16_57171194_+_NUP93_chr16_56857618_length(transcript)=3675nt_BP=1591nt
CCCTCCTCGGCCGGAGGGAGGAGCCCGAGCCGCCGCCGCCGCCGCCGCCCGCCCGCCCGGCCCGGGAGGAGGACCGGACCCCGAGCGGCT
GGGAGCGCACGCGAGCGGGCCGTGGCCGCGCGGGCAGCGCCCTGAGCCTGTCCCGCGCCCGCGGGCCCGGCCGAGCAGGAGCAGCTCCCG
GGGATGCCCGGGCGGCTCGGAGCGCGGGCAGCGGCAGCCGTGCGGTGAGGGCGGTGGCGCCCGCGGGACCTGCGACTGCCAGGAACTCCT
GCCACCGCCACCGGCTCCCATGGCCCACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTGCGTGTG
CAAGGTGGAGCTGTCAGTGAGTGGCCAGAACCTACTGGACCGGGATGTTACCTCCAAGTCCGACCCCTTCTGTGTCCTCTTTACAGAGAA
CAATGGCAGATGGATCGAGTACGACAGGACAGAAACCGCGATCAACAACCTCAACCCCGCCTTCTCCAAGAAGTTCGTGCTTGACTACCA
CTTCGAGGAGGTACAGAAGCTCAAGTTCGCGCTCTTTGACCAGGACAAGTCCAGTATGCGGCTGGACGAGCATGACTTCCTGGGCCAGTT
CTCCTGCAGCCTGGGCACGATCGTCTCCAGCAAGAAGATCACTAGGCCTCTGCTGCTGCTGAATGACAAGCCTGCGGGGAAGGGCTTGAT
TACGATCGCTGCCCAGGAGCTGTCCGACAACCGCGTCATCACACTAAGCCTGGCGGGCAGGAGGCTGGACAAGAAGGACCTCTTTGGGAA
GTCAGACCCCTTTCTGGAGTTTTATAAGCCAGGAGACGATGGCAAGTGGATGCTGGTCCACAGGACTGAGGTGATCAAGTACACACTGGA
CCCTGTGTGGAAGCCATTCACAGTGCCCTTGGTGTCCCTGTGTGATGGGGACATGGAGAAGCCCATCCAGGTCATGTGCTACGACTATGA
CAATGACGGGGGCCATGACTTCATCGGCGAGTTCCAGACCTCAGTGTCACAGATGTGTGAGGCTCGAGACAGCGTCCCGCTGGAGTTCGA
GTGCATCAACCCCAAGAAGCAGAGGAAGAAGAAGAACTATAAAAACTCGGGCATCATCATCCTGCGATCCTGCAAGATAAACCGAGACTA
CTCCTTCCTTGACTACATCCTGGGAGGCTGCCAGCTCATGTTCACCGTTGGAATAGACTTTACAGCCTCCAACGGGAATCCCCTCGACCC
TTCCTCTTTGCACTATATCAACCCTATGGGCACCAACGAATATCTGTCGGCCATCTGGGCTGTTGGGCAGATCATTCAGGACTACGACAG
TGATAAGATGTTTCCAGCTCTGGGATTCGGGGCCCAGTTACCCCCAGACTGGAAGGTCTCCCATGAGTTTGCCATCAACTTCAACCCCAC
CAACCCCTTCTGCTCAGGTGTGGATGGTATTGCCCAGGCGTACTCAGCTTGCCTGCCCCACATCCGCTTCTACGGTCCTACCAATTTCTC
CCCCATCGTCAACCACGTGGCCCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGCCACGAGCATTTCCGACATGTGGACCATGGTAAA
ACAAATGACAGACGTGTTGTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGCGCATGGAGTTTGTCAGGCAGGC
CTTGGCGTACCTTGAGCAGAGTTATAAGAATTACACCCTTGTGACTGTCTTTGGAAATTTGCATCAGGCCCAGCTGGGCGGGGTGCCTGG
GACTTACCAATTGGTTCGAAGTTTCCTGAACATTAAACTGCCAGCTCCCTTGCCTGGACTACAGGATGGAGAGGTGGAAGGCCATCCTGT
GTGGGCGCTAATTTACTACTGCATGCGCTGTGGAGACCTGCTTGCCGCTTCACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAGTT
TAAAACCTGGTTCCAGGAGTACATGAACAGCAAGGACAGAAGATTGTCCCCAGCTACGGAAAACAAGCTCCGGCTGCATTACCGTAGGGC
CCTCAGGAACAATACAGATCCCTACAAGCGGGCCGTGTACTGTATCATTGGCAGATGTGACGTCACCGACAACCAGAGTGAAGTGGCGGA
CAAAACTGAGGATTACCTGTGGCTGAAGTTGAACCAAGTGTGTTTTGACGACGATGGCACCAGCTCCCCACAAGACAGGCTCACTCTCTC
ACAGTTCCAGAAGCAGTTGTTGGAAGACTATGGCGAGTCCCACTTTACGGTGAACCAGCAACCCTTCCTCTACTTCCAAGTCCTGTTCCT
GACAGCGCAGTTTGAAGCAGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCATGCTGTCCATGTAGCACTGGTGCTGTTTGA
GCTGAAGCTGCTTTTAAAGTCCTCTGGACAGAGTGCTCAGCTCCTCAGCCACGAGCCTGGTGACCCTCCTTGCTTGCGGCGGCTGAACTT
CGTGCGGCTCCTCATGCTGTACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGGCCCTCCAGTACTTCTATTTCCTCAGGGATGAGAA
AGATAGTCAAGGAGAAAACATGTTTCTGCGCTGTGTGAGTGAGCTTGTGATTGAAAGCCGAGAGTTCGATATGATTCTTGGGAAACTAGA
GAATGACGGAAGTAGAAAGCCTGGAGTCATAGATAAGTTTACTAGTGACACAAAGCCTATTATCAACAAAGTTGCTTCTGTGGCAGAAAA
TAAAGGACTGTTTGAAGAGGCAGCAAAGCTGTATGACCTTGCCAAGAATGCTGACAAGGTACTGGAGCTGATGAACAAACTGCTGAGCCC
TGTCGTCCCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGCACTCTCCATTGCCGAACGGTATAGGGCTCAAGG
AATAAGCGCAAATAAATTTGTGGACTCCACGTTCTATCTTCTTTTGGACTTGATCACCTTTTTTGACGAGTATCATAGTGGTCATATTGA
TAGAGCTTTTGATATCATTGAGCGCTTGAAGCTGGTGCCCCTGAATCAGGAAAGTGTGGAAGAGAGAGTGGCTGCCTTCAGAAATTTCAG
TGATGAAATCAGGCACAACCTCTCAGAAGTGCTTCTTGCCACCATGAACATCTTGTTCACACAGTTTAAGAGGCTCAAGGGGACAAGTCC
ATCCTCGTCATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACTCTGGCCTGGCTCTGTTGCCCAGGCTGGAATGCAATGACACGATCTC
AGCTCACTGCAACCTCTACCTCTTGGGCTCAAGCCACCCTCCCACCTCACCCTCCCAAGTAGCTGGGACTACAGCAACTCCGAAGTCAAG
CCCGCACTCTGATTACCTTTGCTGGAATGATACCATACCGAACGTCTGGGGACACCAATGCGAGGCTGGTGCAGATGGAGGTCCTCATGA
ATTAAGTGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCACTAGGCTGGGGTTTCTGGTTTTGT

>In-frame_ENST00000290776_ENST00000569842_TCGA-BS-A0U9_CPNE2_chr16_57171194_+_NUP93_chr16_56857618_length(amino acids)=1163AA_start in transcript=88_stop in transcript=3579
MGAHASGPWPRGQRPEPVPRPRARPSRSSSRGCPGGSERGQRQPCGEGGGARGTCDCQELLPPPPAPMAHIPSGGAPAAGAAPMGPQYCV
CKVELSVSGQNLLDRDVTSKSDPFCVLFTENNGRWIEYDRTETAINNLNPAFSKKFVLDYHFEEVQKLKFALFDQDKSSMRLDEHDFLGQ
FSCSLGTIVSSKKITRPLLLLNDKPAGKGLITIAAQELSDNRVITLSLAGRRLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTL
DPVWKPFTVPLVSLCDGDMEKPIQVMCYDYDNDGGHDFIGEFQTSVSQMCEARDSVPLEFECINPKKQRKKKNYKNSGIIILRSCKINRD
YSFLDYILGGCQLMFTVGIDFTASNGNPLDPSSLHYINPMGTNEYLSAIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNP
TNPFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVNHVARFAAQATQQRTATSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQ
ALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGE
FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTL
SQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLN
FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAE
NKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
DRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTSPSSSSRPQRVIEDRDSGLALLPRLECNDTI

--------------------------------------------------------------
>In-frame_ENST00000290776_ENST00000564887_TCGA-BS-A0U9_CPNE2_chr16_57171194_+_NUP93_chr16_56857618_length(transcript)=3552nt_BP=1591nt
CCCTCCTCGGCCGGAGGGAGGAGCCCGAGCCGCCGCCGCCGCCGCCGCCCGCCCGCCCGGCCCGGGAGGAGGACCGGACCCCGAGCGGCT
GGGAGCGCACGCGAGCGGGCCGTGGCCGCGCGGGCAGCGCCCTGAGCCTGTCCCGCGCCCGCGGGCCCGGCCGAGCAGGAGCAGCTCCCG
GGGATGCCCGGGCGGCTCGGAGCGCGGGCAGCGGCAGCCGTGCGGTGAGGGCGGTGGCGCCCGCGGGACCTGCGACTGCCAGGAACTCCT
GCCACCGCCACCGGCTCCCATGGCCCACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTGCGTGTG
CAAGGTGGAGCTGTCAGTGAGTGGCCAGAACCTACTGGACCGGGATGTTACCTCCAAGTCCGACCCCTTCTGTGTCCTCTTTACAGAGAA
CAATGGCAGATGGATCGAGTACGACAGGACAGAAACCGCGATCAACAACCTCAACCCCGCCTTCTCCAAGAAGTTCGTGCTTGACTACCA
CTTCGAGGAGGTACAGAAGCTCAAGTTCGCGCTCTTTGACCAGGACAAGTCCAGTATGCGGCTGGACGAGCATGACTTCCTGGGCCAGTT
CTCCTGCAGCCTGGGCACGATCGTCTCCAGCAAGAAGATCACTAGGCCTCTGCTGCTGCTGAATGACAAGCCTGCGGGGAAGGGCTTGAT
TACGATCGCTGCCCAGGAGCTGTCCGACAACCGCGTCATCACACTAAGCCTGGCGGGCAGGAGGCTGGACAAGAAGGACCTCTTTGGGAA
GTCAGACCCCTTTCTGGAGTTTTATAAGCCAGGAGACGATGGCAAGTGGATGCTGGTCCACAGGACTGAGGTGATCAAGTACACACTGGA
CCCTGTGTGGAAGCCATTCACAGTGCCCTTGGTGTCCCTGTGTGATGGGGACATGGAGAAGCCCATCCAGGTCATGTGCTACGACTATGA
CAATGACGGGGGCCATGACTTCATCGGCGAGTTCCAGACCTCAGTGTCACAGATGTGTGAGGCTCGAGACAGCGTCCCGCTGGAGTTCGA
GTGCATCAACCCCAAGAAGCAGAGGAAGAAGAAGAACTATAAAAACTCGGGCATCATCATCCTGCGATCCTGCAAGATAAACCGAGACTA
CTCCTTCCTTGACTACATCCTGGGAGGCTGCCAGCTCATGTTCACCGTTGGAATAGACTTTACAGCCTCCAACGGGAATCCCCTCGACCC
TTCCTCTTTGCACTATATCAACCCTATGGGCACCAACGAATATCTGTCGGCCATCTGGGCTGTTGGGCAGATCATTCAGGACTACGACAG
TGATAAGATGTTTCCAGCTCTGGGATTCGGGGCCCAGTTACCCCCAGACTGGAAGGTCTCCCATGAGTTTGCCATCAACTTCAACCCCAC
CAACCCCTTCTGCTCAGGTGTGGATGGTATTGCCCAGGCGTACTCAGCTTGCCTGCCCCACATCCGCTTCTACGGTCCTACCAATTTCTC
CCCCATCGTCAACCACGTGGCCCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGCCACGAGCATTTCCGACATGTGGACCATGGTAAA
ACAAATGACAGACGTGTTGTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGCGCATGGAGTTTGTCAGGCAGGC
CTTGGCGTACCTTGAGCAGAGTTATAAGAATTACACCCTTGTGACTGTCTTTGGAAATTTGCATCAGGCCCAGCTGGGCGGGGTGCCTGG
GACTTACCAATTGGTTCGAAGTTTCCTGAACATTAAACTGCCAGCTCCCTTGCCTGGACTACAGGATGGAGAGGTGGAAGGCCATCCTGT
GTGGGCGCTAATTTACTACTGCATGCGCTGTGGAGACCTGCTTGCCGCTTCACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAGTT
TAAAACCTGGTTCCAGGAGTACATGAACAGCAAGGACAGAAGATTGTCCCCAGCTACGGAAAACAAGCTCCGGCTGCATTACCGTAGGGC
CCTCAGGAACAATACAGATCCCTACAAGCGGGCCGTGTACTGTATCATTGGCAGATGTGACGTCACCGACAACCAGAGTGAAGTGGCGGA
CAAAACTGAGGATTACCTGTGGCTGAAGTTGAACCAAGTGTGTTTTGACGACGATGGCACCAGCTCCCCACAAGACAGGCTCACTCTCTC
ACAGTTCCAGAAGCAGTTGTTGGAAGACTATGGCGAGTCCCACTTTACGGTGAACCAGCAACCCTTCCTCTACTTCCAAGTCCTGTTCCT
GACAGCGCAGTTTGAAGCAGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCATGCTGTCCATGTAGCACTGGTGCTGTTTGA
GCTGAAGCTGCTTTTAAAGTCCTCTGGACAGAGTGCTCAGCTCCTCAGCCACGAGCCTGGTGACCCTCCTTGCTTGCGGCGGCTGAACTT
CGTGCGGCTCCTCATGCTGTACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGGCCCTCCAGTACTTCTATTTCCTCAGGGATGAGAA
AGATAGTCAAGGAGAAAACATGTTTCTGCGCTGTGTGAGTGAGCTTGTGATTGAAAGCCGAGAGTTCGATATGATTCTTGGGAAACTAGA
GAATGACGGAAGTAGAAAGCCTGGAGTCATAGATAAGTTTACTAGTGACACAAAGCCTATTATCAACAAAGTTGCTTCTGTGGCAGAAAA
TAAAGGACTGTTTGAAGAGGCAGCAAAGCTGTATGACCTTGCCAAGAATGCTGACAAGGTACTGGAGCTGATGAACAAACTGCTGAGCCC
TGTCGTCCCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGCACTCTCCATTGCCGAACGGTATAGGGCTCAAGG
AATAAGCGCAAATAAATTTGTGGACTCCACGTTCTATCTTCTTTTGGACTTGATCACCTTTTTTGACGAGTATCATAGTGGTCATATTGA
TAGAGCTTTTGATATCATTGAGCGCTTGAAGCTGGTGCCCCTGAATCAGGAAAGTGTGGAAGAGAGAGTGGCTGCCTTCAGAAATTTCAG
TGATGAAATCAGGCACAACCTCTCAGAAGTGCTTCTTGCCACCATGAACATCTTGTTCACACAGTTTAAGAGGCTCAAGGGGACAAGTCC
ATCCTCGTCATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACTCTCAACTCCGAAGTCAAGCCCGCACTCTGATTACCTTTGCTGGAAT
GATACCATACCGAACGTCTGGGGACACCAATGCGAGGCTGGTGCAGATGGAGGTCCTCATGAATTAAGTGCCATGCTTTGTGGGAGTCTG
GGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCACTAGGCTGGGGTTTCTGGTTTTGTTTCTGTTGTGTTTTGTTTTGGTTTCTGT

>In-frame_ENST00000290776_ENST00000564887_TCGA-BS-A0U9_CPNE2_chr16_57171194_+_NUP93_chr16_56857618_length(amino acids)=1102AA_start in transcript=88_stop in transcript=3396
MGAHASGPWPRGQRPEPVPRPRARPSRSSSRGCPGGSERGQRQPCGEGGGARGTCDCQELLPPPPAPMAHIPSGGAPAAGAAPMGPQYCV
CKVELSVSGQNLLDRDVTSKSDPFCVLFTENNGRWIEYDRTETAINNLNPAFSKKFVLDYHFEEVQKLKFALFDQDKSSMRLDEHDFLGQ
FSCSLGTIVSSKKITRPLLLLNDKPAGKGLITIAAQELSDNRVITLSLAGRRLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTL
DPVWKPFTVPLVSLCDGDMEKPIQVMCYDYDNDGGHDFIGEFQTSVSQMCEARDSVPLEFECINPKKQRKKKNYKNSGIIILRSCKINRD
YSFLDYILGGCQLMFTVGIDFTASNGNPLDPSSLHYINPMGTNEYLSAIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNP
TNPFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVNHVARFAAQATQQRTATSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQ
ALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGE
FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTL
SQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLN
FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAE
NKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
DRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTSPSSSSRPQRVIEDRDSQLRSQARTLITFAG

--------------------------------------------------------------
>In-frame_ENST00000537605_ENST00000308159_TCGA-BS-A0U9_CPNE2_chr16_57171194_+_NUP93_chr16_56857618_length(transcript)=3500nt_BP=1534nt
CGGCCCGGGAGGAGGACCGGACCCCGAGCGGCTGGGAGCGCACGCGAGCGGGCCGTGGCCGCGCGGGCAGCGCCCTGAGCCTGTCCCGCG
CCCGCGGGCCCGGCCGAGCAGGAGCAGCTCCCGGGGATGCCCGGGCGGCTCGGAGCGCGGGCAGCGGCAGCCGTGCGGTGAGGGCGGTGG
CGCCCGCGGGACCTGCGACTGCCAGGAACTCCTGCCACCGCCACCGGCTCCCATGGCCCACATACCCAGTGGGGGTGCCCCAGCAGCGGG
GGCAGCCCCCATGGGCCCCCAGTATTGCGTGTGCAAGGTGGAGCTGTCAGTGAGTGGCCAGAACCTACTGGACCGGGATGTTACCTCCAA
GTCCGACCCCTTCTGTGTCCTCTTTACAGAGAACAATGGCAGATGGATCGAGTACGACAGGACAGAAACCGCGATCAACAACCTCAACCC
CGCCTTCTCCAAGAAGTTCGTGCTTGACTACCACTTCGAGGAGGTACAGAAGCTCAAGTTCGCGCTCTTTGACCAGGACAAGTCCAGTAT
GCGGCTGGACGAGCATGACTTCCTGGGCCAGTTCTCCTGCAGCCTGGGCACGATCGTCTCCAGCAAGAAGATCACTAGGCCTCTGCTGCT
GCTGAATGACAAGCCTGCGGGGAAGGGCTTGATTACGATCGCTGCCCAGGAGCTGTCCGACAACCGCGTCATCACACTAAGCCTGGCGGG
CAGGAGGCTGGACAAGAAGGACCTCTTTGGGAAGTCAGACCCCTTTCTGGAGTTTTATAAGCCAGGAGACGATGGCAAGTGGATGCTGGT
CCACAGGACTGAGGTGATCAAGTACACACTGGACCCTGTGTGGAAGCCATTCACAGTGCCCTTGGTGTCCCTGTGTGATGGGGACATGGA
GAAGCCCATCCAGGTCATGTGCTACGACTATGACAATGACGGGGGCCATGACTTCATCGGCGAGTTCCAGACCTCAGTGTCACAGATGTG
TGAGGCTCGAGACAGCGTCCCGCTGGAGTTCGAGTGCATCAACCCCAAGAAGCAGAGGAAGAAGAAGAACTATAAAAACTCGGGCATCAT
CATCCTGCGATCCTGCAAGATAAACCGAGACTACTCCTTCCTTGACTACATCCTGGGAGGCTGCCAGCTCATGTTCACCGTTGGAATAGA
CTTTACAGCCTCCAACGGGAATCCCCTCGACCCTTCCTCTTTGCACTATATCAACCCTATGGGCACCAACGAATATCTGTCGGCCATCTG
GGCTGTTGGGCAGATCATTCAGGACTACGACAGTGATAAGATGTTTCCAGCTCTGGGATTCGGGGCCCAGTTACCCCCAGACTGGAAGGT
CTCCCATGAGTTTGCCATCAACTTCAACCCCACCAACCCCTTCTGCTCAGGTGTGGATGGTATTGCCCAGGCGTACTCAGCTTGCCTGCC
CCACATCCGCTTCTACGGTCCTACCAATTTCTCCCCCATCGTCAACCACGTGGCCCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGC
CACGAGCATTTCCGACATGTGGACCATGGTAAAACAAATGACAGACGTGTTGTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAG
CGTGGAAGTGCGCATGGAGTTTGTCAGGCAGGCCTTGGCGTACCTTGAGCAGAGTTATAAGAATTACACCCTTGTGACTGTCTTTGGAAA
TTTGCATCAGGCCCAGCTGGGCGGGGTGCCTGGGACTTACCAATTGGTTCGAAGTTTCCTGAACATTAAACTGCCAGCTCCCTTGCCTGG
ACTACAGGATGGAGAGGTGGAAGGCCATCCTGTGTGGGCGCTAATTTACTACTGCATGCGCTGTGGAGACCTGCTTGCCGCTTCACAGGT
AGTTAATCGAGCCCAGCACCAGCTGGGAGAGTTTAAAACCTGGTTCCAGGAGTACATGAACAGCAAGGACAGAAGATTGTCCCCAGCTAC
GGAAAACAAGCTCCGGCTGCATTACCGTAGGGCCCTCAGGAACAATACAGATCCCTACAAGCGGGCCGTGTACTGTATCATTGGCAGATG
TGACGTCACCGACAACCAGAGTGAAGTGGCGGACAAAACTGAGGATTACCTGTGGCTGAAGTTGAACCAAGTGTGTTTTGACGACGATGG
CACCAGCTCCCCACAAGACAGGCTCACTCTCTCACAGTTCCAGAAGCAGTTGTTGGAAGACTATGGCGAGTCCCACTTTACGGTGAACCA
GCAACCCTTCCTCTACTTCCAAGTCCTGTTCCTGACAGCGCAGTTTGAAGCAGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTG
CCATGCTGTCCATGTAGCACTGGTGCTGTTTGAGCTGAAGCTGCTTTTAAAGTCCTCTGGACAGAGTGCTCAGCTCCTCAGCCACGAGCC
TGGTGACCCTCCTTGCTTGCGGCGGCTGAACTTCGTGCGGCTCCTCATGCTGTACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGGC
CCTCCAGTACTTCTATTTCCTCAGGGATGAGAAAGATAGTCAAGGAGAAAACATGTTTCTGCGCTGTGTGAGTGAGCTTGTGATTGAAAG
CCGAGAGTTCGATATGATTCTTGGGAAACTAGAGAATGACGGAAGTAGAAAGCCTGGAGTCATAGATAAGTTTACTAGTGACACAAAGCC
TATTATCAACAAAGTTGCTTCTGTGGCAGAAAATAAAGGACTGTTTGAAGAGGCAGCAAAGCTGTATGACCTTGCCAAGAATGCTGACAA
GGTACTGGAGCTGATGAACAAACTGCTGAGCCCTGTCGTCCCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGC
ACTCTCCATTGCCGAACGGTATAGGGCTCAAGGAATAAGCGCAAATAAATTTGTGGACTCCACGTTCTATCTTCTTTTGGACTTGATCAC
CTTTTTTGACGAGTATCATAGTGGTCATATTGATAGAGCTTTTGATATCATTGAGCGCTTGAAGCTGGTGCCCCTGAATCAGGAAAGTGT
GGAAGAGAGAGTGGCTGCCTTCAGAAATTTCAGTGATGAAATCAGGCACAACCTCTCAGAAGTGCTTCTTGCCACCATGAACATCTTGTT
CACACAGTTTAAGAGGCTCAAGGGGACAAGTCCATCCTCGTCATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACTCTCAACTCCGAAG
TCAAGCCCGCACTCTGATTACCTTTGCTGGAATGATACCATACCGAACGTCTGGGGACACCAATGCGAGGCTGGTGCAGATGGAGGTCCT
CATGAATTAAGTGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCACTAGGCTGGGGTTTCTGGT

>In-frame_ENST00000537605_ENST00000308159_TCGA-BS-A0U9_CPNE2_chr16_57171194_+_NUP93_chr16_56857618_length(amino acids)=1102AA_start in transcript=31_stop in transcript=3339
MGAHASGPWPRGQRPEPVPRPRARPSRSSSRGCPGGSERGQRQPCGEGGGARGTCDCQELLPPPPAPMAHIPSGGAPAAGAAPMGPQYCV
CKVELSVSGQNLLDRDVTSKSDPFCVLFTENNGRWIEYDRTETAINNLNPAFSKKFVLDYHFEEVQKLKFALFDQDKSSMRLDEHDFLGQ
FSCSLGTIVSSKKITRPLLLLNDKPAGKGLITIAAQELSDNRVITLSLAGRRLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTL
DPVWKPFTVPLVSLCDGDMEKPIQVMCYDYDNDGGHDFIGEFQTSVSQMCEARDSVPLEFECINPKKQRKKKNYKNSGIIILRSCKINRD
YSFLDYILGGCQLMFTVGIDFTASNGNPLDPSSLHYINPMGTNEYLSAIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNP
TNPFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVNHVARFAAQATQQRTATSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQ
ALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGE
FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTL
SQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLN
FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAE
NKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
DRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTSPSSSSRPQRVIEDRDSQLRSQARTLITFAG

--------------------------------------------------------------
>In-frame_ENST00000537605_ENST00000569842_TCGA-BS-A0U9_CPNE2_chr16_57171194_+_NUP93_chr16_56857618_length(transcript)=3618nt_BP=1534nt
CGGCCCGGGAGGAGGACCGGACCCCGAGCGGCTGGGAGCGCACGCGAGCGGGCCGTGGCCGCGCGGGCAGCGCCCTGAGCCTGTCCCGCG
CCCGCGGGCCCGGCCGAGCAGGAGCAGCTCCCGGGGATGCCCGGGCGGCTCGGAGCGCGGGCAGCGGCAGCCGTGCGGTGAGGGCGGTGG
CGCCCGCGGGACCTGCGACTGCCAGGAACTCCTGCCACCGCCACCGGCTCCCATGGCCCACATACCCAGTGGGGGTGCCCCAGCAGCGGG
GGCAGCCCCCATGGGCCCCCAGTATTGCGTGTGCAAGGTGGAGCTGTCAGTGAGTGGCCAGAACCTACTGGACCGGGATGTTACCTCCAA
GTCCGACCCCTTCTGTGTCCTCTTTACAGAGAACAATGGCAGATGGATCGAGTACGACAGGACAGAAACCGCGATCAACAACCTCAACCC
CGCCTTCTCCAAGAAGTTCGTGCTTGACTACCACTTCGAGGAGGTACAGAAGCTCAAGTTCGCGCTCTTTGACCAGGACAAGTCCAGTAT
GCGGCTGGACGAGCATGACTTCCTGGGCCAGTTCTCCTGCAGCCTGGGCACGATCGTCTCCAGCAAGAAGATCACTAGGCCTCTGCTGCT
GCTGAATGACAAGCCTGCGGGGAAGGGCTTGATTACGATCGCTGCCCAGGAGCTGTCCGACAACCGCGTCATCACACTAAGCCTGGCGGG
CAGGAGGCTGGACAAGAAGGACCTCTTTGGGAAGTCAGACCCCTTTCTGGAGTTTTATAAGCCAGGAGACGATGGCAAGTGGATGCTGGT
CCACAGGACTGAGGTGATCAAGTACACACTGGACCCTGTGTGGAAGCCATTCACAGTGCCCTTGGTGTCCCTGTGTGATGGGGACATGGA
GAAGCCCATCCAGGTCATGTGCTACGACTATGACAATGACGGGGGCCATGACTTCATCGGCGAGTTCCAGACCTCAGTGTCACAGATGTG
TGAGGCTCGAGACAGCGTCCCGCTGGAGTTCGAGTGCATCAACCCCAAGAAGCAGAGGAAGAAGAAGAACTATAAAAACTCGGGCATCAT
CATCCTGCGATCCTGCAAGATAAACCGAGACTACTCCTTCCTTGACTACATCCTGGGAGGCTGCCAGCTCATGTTCACCGTTGGAATAGA
CTTTACAGCCTCCAACGGGAATCCCCTCGACCCTTCCTCTTTGCACTATATCAACCCTATGGGCACCAACGAATATCTGTCGGCCATCTG
GGCTGTTGGGCAGATCATTCAGGACTACGACAGTGATAAGATGTTTCCAGCTCTGGGATTCGGGGCCCAGTTACCCCCAGACTGGAAGGT
CTCCCATGAGTTTGCCATCAACTTCAACCCCACCAACCCCTTCTGCTCAGGTGTGGATGGTATTGCCCAGGCGTACTCAGCTTGCCTGCC
CCACATCCGCTTCTACGGTCCTACCAATTTCTCCCCCATCGTCAACCACGTGGCCCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGC
CACGAGCATTTCCGACATGTGGACCATGGTAAAACAAATGACAGACGTGTTGTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAG
CGTGGAAGTGCGCATGGAGTTTGTCAGGCAGGCCTTGGCGTACCTTGAGCAGAGTTATAAGAATTACACCCTTGTGACTGTCTTTGGAAA
TTTGCATCAGGCCCAGCTGGGCGGGGTGCCTGGGACTTACCAATTGGTTCGAAGTTTCCTGAACATTAAACTGCCAGCTCCCTTGCCTGG
ACTACAGGATGGAGAGGTGGAAGGCCATCCTGTGTGGGCGCTAATTTACTACTGCATGCGCTGTGGAGACCTGCTTGCCGCTTCACAGGT
AGTTAATCGAGCCCAGCACCAGCTGGGAGAGTTTAAAACCTGGTTCCAGGAGTACATGAACAGCAAGGACAGAAGATTGTCCCCAGCTAC
GGAAAACAAGCTCCGGCTGCATTACCGTAGGGCCCTCAGGAACAATACAGATCCCTACAAGCGGGCCGTGTACTGTATCATTGGCAGATG
TGACGTCACCGACAACCAGAGTGAAGTGGCGGACAAAACTGAGGATTACCTGTGGCTGAAGTTGAACCAAGTGTGTTTTGACGACGATGG
CACCAGCTCCCCACAAGACAGGCTCACTCTCTCACAGTTCCAGAAGCAGTTGTTGGAAGACTATGGCGAGTCCCACTTTACGGTGAACCA
GCAACCCTTCCTCTACTTCCAAGTCCTGTTCCTGACAGCGCAGTTTGAAGCAGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTG
CCATGCTGTCCATGTAGCACTGGTGCTGTTTGAGCTGAAGCTGCTTTTAAAGTCCTCTGGACAGAGTGCTCAGCTCCTCAGCCACGAGCC
TGGTGACCCTCCTTGCTTGCGGCGGCTGAACTTCGTGCGGCTCCTCATGCTGTACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGGC
CCTCCAGTACTTCTATTTCCTCAGGGATGAGAAAGATAGTCAAGGAGAAAACATGTTTCTGCGCTGTGTGAGTGAGCTTGTGATTGAAAG
CCGAGAGTTCGATATGATTCTTGGGAAACTAGAGAATGACGGAAGTAGAAAGCCTGGAGTCATAGATAAGTTTACTAGTGACACAAAGCC
TATTATCAACAAAGTTGCTTCTGTGGCAGAAAATAAAGGACTGTTTGAAGAGGCAGCAAAGCTGTATGACCTTGCCAAGAATGCTGACAA
GGTACTGGAGCTGATGAACAAACTGCTGAGCCCTGTCGTCCCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGC
ACTCTCCATTGCCGAACGGTATAGGGCTCAAGGAATAAGCGCAAATAAATTTGTGGACTCCACGTTCTATCTTCTTTTGGACTTGATCAC
CTTTTTTGACGAGTATCATAGTGGTCATATTGATAGAGCTTTTGATATCATTGAGCGCTTGAAGCTGGTGCCCCTGAATCAGGAAAGTGT
GGAAGAGAGAGTGGCTGCCTTCAGAAATTTCAGTGATGAAATCAGGCACAACCTCTCAGAAGTGCTTCTTGCCACCATGAACATCTTGTT
CACACAGTTTAAGAGGCTCAAGGGGACAAGTCCATCCTCGTCATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACTCTGGCCTGGCTCT
GTTGCCCAGGCTGGAATGCAATGACACGATCTCAGCTCACTGCAACCTCTACCTCTTGGGCTCAAGCCACCCTCCCACCTCACCCTCCCA
AGTAGCTGGGACTACAGCAACTCCGAAGTCAAGCCCGCACTCTGATTACCTTTGCTGGAATGATACCATACCGAACGTCTGGGGACACCA
ATGCGAGGCTGGTGCAGATGGAGGTCCTCATGAATTAAGTGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCAC
ATGGGCCCACTAGGCTGGGGTTTCTGGTTTTGTTTCTGTTGTGTTTTGTTTTGGTTTCTGTATTATGTATTTTTGTCAACGCCAATAAAT

>In-frame_ENST00000537605_ENST00000569842_TCGA-BS-A0U9_CPNE2_chr16_57171194_+_NUP93_chr16_56857618_length(amino acids)=1163AA_start in transcript=31_stop in transcript=3522
MGAHASGPWPRGQRPEPVPRPRARPSRSSSRGCPGGSERGQRQPCGEGGGARGTCDCQELLPPPPAPMAHIPSGGAPAAGAAPMGPQYCV
CKVELSVSGQNLLDRDVTSKSDPFCVLFTENNGRWIEYDRTETAINNLNPAFSKKFVLDYHFEEVQKLKFALFDQDKSSMRLDEHDFLGQ
FSCSLGTIVSSKKITRPLLLLNDKPAGKGLITIAAQELSDNRVITLSLAGRRLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTL
DPVWKPFTVPLVSLCDGDMEKPIQVMCYDYDNDGGHDFIGEFQTSVSQMCEARDSVPLEFECINPKKQRKKKNYKNSGIIILRSCKINRD
YSFLDYILGGCQLMFTVGIDFTASNGNPLDPSSLHYINPMGTNEYLSAIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNP
TNPFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVNHVARFAAQATQQRTATSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQ
ALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGE
FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTL
SQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLN
FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAE
NKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
DRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTSPSSSSRPQRVIEDRDSGLALLPRLECNDTI

--------------------------------------------------------------
>In-frame_ENST00000537605_ENST00000564887_TCGA-BS-A0U9_CPNE2_chr16_57171194_+_NUP93_chr16_56857618_length(transcript)=3495nt_BP=1534nt
CGGCCCGGGAGGAGGACCGGACCCCGAGCGGCTGGGAGCGCACGCGAGCGGGCCGTGGCCGCGCGGGCAGCGCCCTGAGCCTGTCCCGCG
CCCGCGGGCCCGGCCGAGCAGGAGCAGCTCCCGGGGATGCCCGGGCGGCTCGGAGCGCGGGCAGCGGCAGCCGTGCGGTGAGGGCGGTGG
CGCCCGCGGGACCTGCGACTGCCAGGAACTCCTGCCACCGCCACCGGCTCCCATGGCCCACATACCCAGTGGGGGTGCCCCAGCAGCGGG
GGCAGCCCCCATGGGCCCCCAGTATTGCGTGTGCAAGGTGGAGCTGTCAGTGAGTGGCCAGAACCTACTGGACCGGGATGTTACCTCCAA
GTCCGACCCCTTCTGTGTCCTCTTTACAGAGAACAATGGCAGATGGATCGAGTACGACAGGACAGAAACCGCGATCAACAACCTCAACCC
CGCCTTCTCCAAGAAGTTCGTGCTTGACTACCACTTCGAGGAGGTACAGAAGCTCAAGTTCGCGCTCTTTGACCAGGACAAGTCCAGTAT
GCGGCTGGACGAGCATGACTTCCTGGGCCAGTTCTCCTGCAGCCTGGGCACGATCGTCTCCAGCAAGAAGATCACTAGGCCTCTGCTGCT
GCTGAATGACAAGCCTGCGGGGAAGGGCTTGATTACGATCGCTGCCCAGGAGCTGTCCGACAACCGCGTCATCACACTAAGCCTGGCGGG
CAGGAGGCTGGACAAGAAGGACCTCTTTGGGAAGTCAGACCCCTTTCTGGAGTTTTATAAGCCAGGAGACGATGGCAAGTGGATGCTGGT
CCACAGGACTGAGGTGATCAAGTACACACTGGACCCTGTGTGGAAGCCATTCACAGTGCCCTTGGTGTCCCTGTGTGATGGGGACATGGA
GAAGCCCATCCAGGTCATGTGCTACGACTATGACAATGACGGGGGCCATGACTTCATCGGCGAGTTCCAGACCTCAGTGTCACAGATGTG
TGAGGCTCGAGACAGCGTCCCGCTGGAGTTCGAGTGCATCAACCCCAAGAAGCAGAGGAAGAAGAAGAACTATAAAAACTCGGGCATCAT
CATCCTGCGATCCTGCAAGATAAACCGAGACTACTCCTTCCTTGACTACATCCTGGGAGGCTGCCAGCTCATGTTCACCGTTGGAATAGA
CTTTACAGCCTCCAACGGGAATCCCCTCGACCCTTCCTCTTTGCACTATATCAACCCTATGGGCACCAACGAATATCTGTCGGCCATCTG
GGCTGTTGGGCAGATCATTCAGGACTACGACAGTGATAAGATGTTTCCAGCTCTGGGATTCGGGGCCCAGTTACCCCCAGACTGGAAGGT
CTCCCATGAGTTTGCCATCAACTTCAACCCCACCAACCCCTTCTGCTCAGGTGTGGATGGTATTGCCCAGGCGTACTCAGCTTGCCTGCC
CCACATCCGCTTCTACGGTCCTACCAATTTCTCCCCCATCGTCAACCACGTGGCCCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGC
CACGAGCATTTCCGACATGTGGACCATGGTAAAACAAATGACAGACGTGTTGTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAG
CGTGGAAGTGCGCATGGAGTTTGTCAGGCAGGCCTTGGCGTACCTTGAGCAGAGTTATAAGAATTACACCCTTGTGACTGTCTTTGGAAA
TTTGCATCAGGCCCAGCTGGGCGGGGTGCCTGGGACTTACCAATTGGTTCGAAGTTTCCTGAACATTAAACTGCCAGCTCCCTTGCCTGG
ACTACAGGATGGAGAGGTGGAAGGCCATCCTGTGTGGGCGCTAATTTACTACTGCATGCGCTGTGGAGACCTGCTTGCCGCTTCACAGGT
AGTTAATCGAGCCCAGCACCAGCTGGGAGAGTTTAAAACCTGGTTCCAGGAGTACATGAACAGCAAGGACAGAAGATTGTCCCCAGCTAC
GGAAAACAAGCTCCGGCTGCATTACCGTAGGGCCCTCAGGAACAATACAGATCCCTACAAGCGGGCCGTGTACTGTATCATTGGCAGATG
TGACGTCACCGACAACCAGAGTGAAGTGGCGGACAAAACTGAGGATTACCTGTGGCTGAAGTTGAACCAAGTGTGTTTTGACGACGATGG
CACCAGCTCCCCACAAGACAGGCTCACTCTCTCACAGTTCCAGAAGCAGTTGTTGGAAGACTATGGCGAGTCCCACTTTACGGTGAACCA
GCAACCCTTCCTCTACTTCCAAGTCCTGTTCCTGACAGCGCAGTTTGAAGCAGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTG
CCATGCTGTCCATGTAGCACTGGTGCTGTTTGAGCTGAAGCTGCTTTTAAAGTCCTCTGGACAGAGTGCTCAGCTCCTCAGCCACGAGCC
TGGTGACCCTCCTTGCTTGCGGCGGCTGAACTTCGTGCGGCTCCTCATGCTGTACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGGC
CCTCCAGTACTTCTATTTCCTCAGGGATGAGAAAGATAGTCAAGGAGAAAACATGTTTCTGCGCTGTGTGAGTGAGCTTGTGATTGAAAG
CCGAGAGTTCGATATGATTCTTGGGAAACTAGAGAATGACGGAAGTAGAAAGCCTGGAGTCATAGATAAGTTTACTAGTGACACAAAGCC
TATTATCAACAAAGTTGCTTCTGTGGCAGAAAATAAAGGACTGTTTGAAGAGGCAGCAAAGCTGTATGACCTTGCCAAGAATGCTGACAA
GGTACTGGAGCTGATGAACAAACTGCTGAGCCCTGTCGTCCCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGC
ACTCTCCATTGCCGAACGGTATAGGGCTCAAGGAATAAGCGCAAATAAATTTGTGGACTCCACGTTCTATCTTCTTTTGGACTTGATCAC
CTTTTTTGACGAGTATCATAGTGGTCATATTGATAGAGCTTTTGATATCATTGAGCGCTTGAAGCTGGTGCCCCTGAATCAGGAAAGTGT
GGAAGAGAGAGTGGCTGCCTTCAGAAATTTCAGTGATGAAATCAGGCACAACCTCTCAGAAGTGCTTCTTGCCACCATGAACATCTTGTT
CACACAGTTTAAGAGGCTCAAGGGGACAAGTCCATCCTCGTCATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACTCTCAACTCCGAAG
TCAAGCCCGCACTCTGATTACCTTTGCTGGAATGATACCATACCGAACGTCTGGGGACACCAATGCGAGGCTGGTGCAGATGGAGGTCCT
CATGAATTAAGTGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCACTAGGCTGGGGTTTCTGGT

>In-frame_ENST00000537605_ENST00000564887_TCGA-BS-A0U9_CPNE2_chr16_57171194_+_NUP93_chr16_56857618_length(amino acids)=1102AA_start in transcript=31_stop in transcript=3339
MGAHASGPWPRGQRPEPVPRPRARPSRSSSRGCPGGSERGQRQPCGEGGGARGTCDCQELLPPPPAPMAHIPSGGAPAAGAAPMGPQYCV
CKVELSVSGQNLLDRDVTSKSDPFCVLFTENNGRWIEYDRTETAINNLNPAFSKKFVLDYHFEEVQKLKFALFDQDKSSMRLDEHDFLGQ
FSCSLGTIVSSKKITRPLLLLNDKPAGKGLITIAAQELSDNRVITLSLAGRRLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTL
DPVWKPFTVPLVSLCDGDMEKPIQVMCYDYDNDGGHDFIGEFQTSVSQMCEARDSVPLEFECINPKKQRKKKNYKNSGIIILRSCKINRD
YSFLDYILGGCQLMFTVGIDFTASNGNPLDPSSLHYINPMGTNEYLSAIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNP
TNPFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVNHVARFAAQATQQRTATSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQ
ALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGE
FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTL
SQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLN
FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAE
NKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
DRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTSPSSSSRPQRVIEDRDSQLRSQARTLITFAG

--------------------------------------------------------------
>In-frame_ENST00000535318_ENST00000308159_TCGA-BS-A0U9_CPNE2_chr16_57171194_+_NUP93_chr16_56857618_length(transcript)=3629nt_BP=1663nt
GGACCGGACCCCGAGCGGCTGGGAGCGCACGCGAGCGGGCCGTGGCCGCGCGGGCAGCGCCCTGAGCCTGTCCCGCGCCCGCGGGCCCGG
CCGAGCAGGAGCAGCTCCCGGGGATGCCCGGGCGGCTCGGAGCGCGGGCAGCGGCAGCCGTGCGGTGAGGGCGGTGGCGCCCGCGGGACC
TGCGGGAACTTGGCCCAGACCCTCCCCCCCTGTGGCCCTCTGGGTCACCATCTGTGAAATGGGCTGATGTTCCGGGGCCTGCCTCCTGGA
GAATGGACACAGCATGAAGGCGTGGTTTTATGGCATTCCGCCTGGCATAGGTCCAGACTGCCAGGAACTCCTGCCACCGCCACCGGCTCC
CATGGCCCACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTGCGTGTGCAAGGTGGAGCTGTCAGT
GAGTGGCCAGAACCTACTGGACCGGGATGTTACCTCCAAGTCCGACCCCTTCTGTGTCCTCTTTACAGAGAACAATGGCAGATGGATCGA
GTACGACAGGACAGAAACCGCGATCAACAACCTCAACCCCGCCTTCTCCAAGAAGTTCGTGCTTGACTACCACTTCGAGGAGGTACAGAA
GCTCAAGTTCGCGCTCTTTGACCAGGACAAGTCCAGTATGCGGCTGGACGAGCATGACTTCCTGGGCCAGTTCTCCTGCAGCCTGGGCAC
GATCGTCTCCAGCAAGAAGATCACTAGGCCTCTGCTGCTGCTGAATGACAAGCCTGCGGGGAAGGGCTTGATTACGATCGCTGCCCAGGA
GCTGTCCGACAACCGCGTCATCACACTAAGCCTGGCGGGCAGGAGGCTGGACAAGAAGGACCTCTTTGGGAAGTCAGACCCCTTTCTGGA
GTTTTATAAGCCAGGAGACGATGGCAAGTGGATGCTGGTCCACAGGACTGAGGTGATCAAGTACACACTGGACCCTGTGTGGAAGCCATT
CACAGTGCCCTTGGTGTCCCTGTGTGATGGGGACATGGAGAAGCCCATCCAGGTCATGTGCTACGACTATGACAATGACGGGGGCCATGA
CTTCATCGGCGAGTTCCAGACCTCAGTGTCACAGATGTGTGAGGCTCGAGACAGCGTCCCGCTGGAGTTCGAGTGCATCAACCCCAAGAA
GCAGAGGAAGAAGAAGAACTATAAAAACTCGGGCATCATCATCCTGCGATCCTGCAAGATAAACCGAGACTACTCCTTCCTTGACTACAT
CCTGGGAGGCTGCCAGCTCATGTTCACCGTTGGAATAGACTTTACAGCCTCCAACGGGAATCCCCTCGACCCTTCCTCTTTGCACTATAT
CAACCCTATGGGCACCAACGAATATCTGTCGGCCATCTGGGCTGTTGGGCAGATCATTCAGGACTACGACAGTGATAAGATGTTTCCAGC
TCTGGGATTCGGGGCCCAGTTACCCCCAGACTGGAAGGTCTCCCATGAGTTTGCCATCAACTTCAACCCCACCAACCCCTTCTGCTCAGG
TGTGGATGGTATTGCCCAGGCGTACTCAGCTTGCCTGCCCCACATCCGCTTCTACGGTCCTACCAATTTCTCCCCCATCGTCAACCACGT
GGCCCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGCCACGAGCATTTCCGACATGTGGACCATGGTAAAACAAATGACAGACGTGTT
GTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGCGCATGGAGTTTGTCAGGCAGGCCTTGGCGTACCTTGAGCA
GAGTTATAAGAATTACACCCTTGTGACTGTCTTTGGAAATTTGCATCAGGCCCAGCTGGGCGGGGTGCCTGGGACTTACCAATTGGTTCG
AAGTTTCCTGAACATTAAACTGCCAGCTCCCTTGCCTGGACTACAGGATGGAGAGGTGGAAGGCCATCCTGTGTGGGCGCTAATTTACTA
CTGCATGCGCTGTGGAGACCTGCTTGCCGCTTCACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAGTTTAAAACCTGGTTCCAGGA
GTACATGAACAGCAAGGACAGAAGATTGTCCCCAGCTACGGAAAACAAGCTCCGGCTGCATTACCGTAGGGCCCTCAGGAACAATACAGA
TCCCTACAAGCGGGCCGTGTACTGTATCATTGGCAGATGTGACGTCACCGACAACCAGAGTGAAGTGGCGGACAAAACTGAGGATTACCT
GTGGCTGAAGTTGAACCAAGTGTGTTTTGACGACGATGGCACCAGCTCCCCACAAGACAGGCTCACTCTCTCACAGTTCCAGAAGCAGTT
GTTGGAAGACTATGGCGAGTCCCACTTTACGGTGAACCAGCAACCCTTCCTCTACTTCCAAGTCCTGTTCCTGACAGCGCAGTTTGAAGC
AGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCATGCTGTCCATGTAGCACTGGTGCTGTTTGAGCTGAAGCTGCTTTTAAA
GTCCTCTGGACAGAGTGCTCAGCTCCTCAGCCACGAGCCTGGTGACCCTCCTTGCTTGCGGCGGCTGAACTTCGTGCGGCTCCTCATGCT
GTACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGGCCCTCCAGTACTTCTATTTCCTCAGGGATGAGAAAGATAGTCAAGGAGAAAA
CATGTTTCTGCGCTGTGTGAGTGAGCTTGTGATTGAAAGCCGAGAGTTCGATATGATTCTTGGGAAACTAGAGAATGACGGAAGTAGAAA
GCCTGGAGTCATAGATAAGTTTACTAGTGACACAAAGCCTATTATCAACAAAGTTGCTTCTGTGGCAGAAAATAAAGGACTGTTTGAAGA
GGCAGCAAAGCTGTATGACCTTGCCAAGAATGCTGACAAGGTACTGGAGCTGATGAACAAACTGCTGAGCCCTGTCGTCCCCCAGATCAG
TGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGCACTCTCCATTGCCGAACGGTATAGGGCTCAAGGAATAAGCGCAAATAAATT
TGTGGACTCCACGTTCTATCTTCTTTTGGACTTGATCACCTTTTTTGACGAGTATCATAGTGGTCATATTGATAGAGCTTTTGATATCAT
TGAGCGCTTGAAGCTGGTGCCCCTGAATCAGGAAAGTGTGGAAGAGAGAGTGGCTGCCTTCAGAAATTTCAGTGATGAAATCAGGCACAA
CCTCTCAGAAGTGCTTCTTGCCACCATGAACATCTTGTTCACACAGTTTAAGAGGCTCAAGGGGACAAGTCCATCCTCGTCATCCAGGCC
CCAGCGAGTCATCGAGGACCGCGACTCTCAACTCCGAAGTCAAGCCCGCACTCTGATTACCTTTGCTGGAATGATACCATACCGAACGTC
TGGGGACACCAATGCGAGGCTGGTGCAGATGGAGGTCCTCATGAATTAAGTGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGT
ACATCAGGCACATGGGCCCACTAGGCTGGGGTTTCTGGTTTTGTTTCTGTTGTGTTTTGTTTTGGTTTCTGTATTATGTATTTTTGTCAA

>In-frame_ENST00000535318_ENST00000308159_TCGA-BS-A0U9_CPNE2_chr16_57171194_+_NUP93_chr16_56857618_length(amino acids)=1067AA_start in transcript=265_stop in transcript=3468
MENGHSMKAWFYGIPPGIGPDCQELLPPPPAPMAHIPSGGAPAAGAAPMGPQYCVCKVELSVSGQNLLDRDVTSKSDPFCVLFTENNGRW
IEYDRTETAINNLNPAFSKKFVLDYHFEEVQKLKFALFDQDKSSMRLDEHDFLGQFSCSLGTIVSSKKITRPLLLLNDKPAGKGLITIAA
QELSDNRVITLSLAGRRLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTLDPVWKPFTVPLVSLCDGDMEKPIQVMCYDYDNDGG
HDFIGEFQTSVSQMCEARDSVPLEFECINPKKQRKKKNYKNSGIIILRSCKINRDYSFLDYILGGCQLMFTVGIDFTASNGNPLDPSSLH
YINPMGTNEYLSAIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNPTNPFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVN
HVARFAAQATQQRTATSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQL
VRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNN
TDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQF
EAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQG
ENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQ
ISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIR

--------------------------------------------------------------
>In-frame_ENST00000535318_ENST00000569842_TCGA-BS-A0U9_CPNE2_chr16_57171194_+_NUP93_chr16_56857618_length(transcript)=3747nt_BP=1663nt
GGACCGGACCCCGAGCGGCTGGGAGCGCACGCGAGCGGGCCGTGGCCGCGCGGGCAGCGCCCTGAGCCTGTCCCGCGCCCGCGGGCCCGG
CCGAGCAGGAGCAGCTCCCGGGGATGCCCGGGCGGCTCGGAGCGCGGGCAGCGGCAGCCGTGCGGTGAGGGCGGTGGCGCCCGCGGGACC
TGCGGGAACTTGGCCCAGACCCTCCCCCCCTGTGGCCCTCTGGGTCACCATCTGTGAAATGGGCTGATGTTCCGGGGCCTGCCTCCTGGA
GAATGGACACAGCATGAAGGCGTGGTTTTATGGCATTCCGCCTGGCATAGGTCCAGACTGCCAGGAACTCCTGCCACCGCCACCGGCTCC
CATGGCCCACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTGCGTGTGCAAGGTGGAGCTGTCAGT
GAGTGGCCAGAACCTACTGGACCGGGATGTTACCTCCAAGTCCGACCCCTTCTGTGTCCTCTTTACAGAGAACAATGGCAGATGGATCGA
GTACGACAGGACAGAAACCGCGATCAACAACCTCAACCCCGCCTTCTCCAAGAAGTTCGTGCTTGACTACCACTTCGAGGAGGTACAGAA
GCTCAAGTTCGCGCTCTTTGACCAGGACAAGTCCAGTATGCGGCTGGACGAGCATGACTTCCTGGGCCAGTTCTCCTGCAGCCTGGGCAC
GATCGTCTCCAGCAAGAAGATCACTAGGCCTCTGCTGCTGCTGAATGACAAGCCTGCGGGGAAGGGCTTGATTACGATCGCTGCCCAGGA
GCTGTCCGACAACCGCGTCATCACACTAAGCCTGGCGGGCAGGAGGCTGGACAAGAAGGACCTCTTTGGGAAGTCAGACCCCTTTCTGGA
GTTTTATAAGCCAGGAGACGATGGCAAGTGGATGCTGGTCCACAGGACTGAGGTGATCAAGTACACACTGGACCCTGTGTGGAAGCCATT
CACAGTGCCCTTGGTGTCCCTGTGTGATGGGGACATGGAGAAGCCCATCCAGGTCATGTGCTACGACTATGACAATGACGGGGGCCATGA
CTTCATCGGCGAGTTCCAGACCTCAGTGTCACAGATGTGTGAGGCTCGAGACAGCGTCCCGCTGGAGTTCGAGTGCATCAACCCCAAGAA
GCAGAGGAAGAAGAAGAACTATAAAAACTCGGGCATCATCATCCTGCGATCCTGCAAGATAAACCGAGACTACTCCTTCCTTGACTACAT
CCTGGGAGGCTGCCAGCTCATGTTCACCGTTGGAATAGACTTTACAGCCTCCAACGGGAATCCCCTCGACCCTTCCTCTTTGCACTATAT
CAACCCTATGGGCACCAACGAATATCTGTCGGCCATCTGGGCTGTTGGGCAGATCATTCAGGACTACGACAGTGATAAGATGTTTCCAGC
TCTGGGATTCGGGGCCCAGTTACCCCCAGACTGGAAGGTCTCCCATGAGTTTGCCATCAACTTCAACCCCACCAACCCCTTCTGCTCAGG
TGTGGATGGTATTGCCCAGGCGTACTCAGCTTGCCTGCCCCACATCCGCTTCTACGGTCCTACCAATTTCTCCCCCATCGTCAACCACGT
GGCCCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGCCACGAGCATTTCCGACATGTGGACCATGGTAAAACAAATGACAGACGTGTT
GTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGCGCATGGAGTTTGTCAGGCAGGCCTTGGCGTACCTTGAGCA
GAGTTATAAGAATTACACCCTTGTGACTGTCTTTGGAAATTTGCATCAGGCCCAGCTGGGCGGGGTGCCTGGGACTTACCAATTGGTTCG
AAGTTTCCTGAACATTAAACTGCCAGCTCCCTTGCCTGGACTACAGGATGGAGAGGTGGAAGGCCATCCTGTGTGGGCGCTAATTTACTA
CTGCATGCGCTGTGGAGACCTGCTTGCCGCTTCACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAGTTTAAAACCTGGTTCCAGGA
GTACATGAACAGCAAGGACAGAAGATTGTCCCCAGCTACGGAAAACAAGCTCCGGCTGCATTACCGTAGGGCCCTCAGGAACAATACAGA
TCCCTACAAGCGGGCCGTGTACTGTATCATTGGCAGATGTGACGTCACCGACAACCAGAGTGAAGTGGCGGACAAAACTGAGGATTACCT
GTGGCTGAAGTTGAACCAAGTGTGTTTTGACGACGATGGCACCAGCTCCCCACAAGACAGGCTCACTCTCTCACAGTTCCAGAAGCAGTT
GTTGGAAGACTATGGCGAGTCCCACTTTACGGTGAACCAGCAACCCTTCCTCTACTTCCAAGTCCTGTTCCTGACAGCGCAGTTTGAAGC
AGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCATGCTGTCCATGTAGCACTGGTGCTGTTTGAGCTGAAGCTGCTTTTAAA
GTCCTCTGGACAGAGTGCTCAGCTCCTCAGCCACGAGCCTGGTGACCCTCCTTGCTTGCGGCGGCTGAACTTCGTGCGGCTCCTCATGCT
GTACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGGCCCTCCAGTACTTCTATTTCCTCAGGGATGAGAAAGATAGTCAAGGAGAAAA
CATGTTTCTGCGCTGTGTGAGTGAGCTTGTGATTGAAAGCCGAGAGTTCGATATGATTCTTGGGAAACTAGAGAATGACGGAAGTAGAAA
GCCTGGAGTCATAGATAAGTTTACTAGTGACACAAAGCCTATTATCAACAAAGTTGCTTCTGTGGCAGAAAATAAAGGACTGTTTGAAGA
GGCAGCAAAGCTGTATGACCTTGCCAAGAATGCTGACAAGGTACTGGAGCTGATGAACAAACTGCTGAGCCCTGTCGTCCCCCAGATCAG
TGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGCACTCTCCATTGCCGAACGGTATAGGGCTCAAGGAATAAGCGCAAATAAATT
TGTGGACTCCACGTTCTATCTTCTTTTGGACTTGATCACCTTTTTTGACGAGTATCATAGTGGTCATATTGATAGAGCTTTTGATATCAT
TGAGCGCTTGAAGCTGGTGCCCCTGAATCAGGAAAGTGTGGAAGAGAGAGTGGCTGCCTTCAGAAATTTCAGTGATGAAATCAGGCACAA
CCTCTCAGAAGTGCTTCTTGCCACCATGAACATCTTGTTCACACAGTTTAAGAGGCTCAAGGGGACAAGTCCATCCTCGTCATCCAGGCC
CCAGCGAGTCATCGAGGACCGCGACTCTGGCCTGGCTCTGTTGCCCAGGCTGGAATGCAATGACACGATCTCAGCTCACTGCAACCTCTA
CCTCTTGGGCTCAAGCCACCCTCCCACCTCACCCTCCCAAGTAGCTGGGACTACAGCAACTCCGAAGTCAAGCCCGCACTCTGATTACCT
TTGCTGGAATGATACCATACCGAACGTCTGGGGACACCAATGCGAGGCTGGTGCAGATGGAGGTCCTCATGAATTAAGTGCCATGCTTTG
TGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCACTAGGCTGGGGTTTCTGGTTTTGTTTCTGTTGTGTTTTGTTT

>In-frame_ENST00000535318_ENST00000569842_TCGA-BS-A0U9_CPNE2_chr16_57171194_+_NUP93_chr16_56857618_length(amino acids)=1128AA_start in transcript=265_stop in transcript=3651
MENGHSMKAWFYGIPPGIGPDCQELLPPPPAPMAHIPSGGAPAAGAAPMGPQYCVCKVELSVSGQNLLDRDVTSKSDPFCVLFTENNGRW
IEYDRTETAINNLNPAFSKKFVLDYHFEEVQKLKFALFDQDKSSMRLDEHDFLGQFSCSLGTIVSSKKITRPLLLLNDKPAGKGLITIAA
QELSDNRVITLSLAGRRLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTLDPVWKPFTVPLVSLCDGDMEKPIQVMCYDYDNDGG
HDFIGEFQTSVSQMCEARDSVPLEFECINPKKQRKKKNYKNSGIIILRSCKINRDYSFLDYILGGCQLMFTVGIDFTASNGNPLDPSSLH
YINPMGTNEYLSAIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNPTNPFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVN
HVARFAAQATQQRTATSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQL
VRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNN
TDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQF
EAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQG
ENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQ
ISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIR
HNLSEVLLATMNILFTQFKRLKGTSPSSSSRPQRVIEDRDSGLALLPRLECNDTISAHCNLYLLGSSHPPTSPSQVAGTTATPKSSPHSD

--------------------------------------------------------------
>In-frame_ENST00000535318_ENST00000564887_TCGA-BS-A0U9_CPNE2_chr16_57171194_+_NUP93_chr16_56857618_length(transcript)=3624nt_BP=1663nt
GGACCGGACCCCGAGCGGCTGGGAGCGCACGCGAGCGGGCCGTGGCCGCGCGGGCAGCGCCCTGAGCCTGTCCCGCGCCCGCGGGCCCGG
CCGAGCAGGAGCAGCTCCCGGGGATGCCCGGGCGGCTCGGAGCGCGGGCAGCGGCAGCCGTGCGGTGAGGGCGGTGGCGCCCGCGGGACC
TGCGGGAACTTGGCCCAGACCCTCCCCCCCTGTGGCCCTCTGGGTCACCATCTGTGAAATGGGCTGATGTTCCGGGGCCTGCCTCCTGGA
GAATGGACACAGCATGAAGGCGTGGTTTTATGGCATTCCGCCTGGCATAGGTCCAGACTGCCAGGAACTCCTGCCACCGCCACCGGCTCC
CATGGCCCACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTGCGTGTGCAAGGTGGAGCTGTCAGT
GAGTGGCCAGAACCTACTGGACCGGGATGTTACCTCCAAGTCCGACCCCTTCTGTGTCCTCTTTACAGAGAACAATGGCAGATGGATCGA
GTACGACAGGACAGAAACCGCGATCAACAACCTCAACCCCGCCTTCTCCAAGAAGTTCGTGCTTGACTACCACTTCGAGGAGGTACAGAA
GCTCAAGTTCGCGCTCTTTGACCAGGACAAGTCCAGTATGCGGCTGGACGAGCATGACTTCCTGGGCCAGTTCTCCTGCAGCCTGGGCAC
GATCGTCTCCAGCAAGAAGATCACTAGGCCTCTGCTGCTGCTGAATGACAAGCCTGCGGGGAAGGGCTTGATTACGATCGCTGCCCAGGA
GCTGTCCGACAACCGCGTCATCACACTAAGCCTGGCGGGCAGGAGGCTGGACAAGAAGGACCTCTTTGGGAAGTCAGACCCCTTTCTGGA
GTTTTATAAGCCAGGAGACGATGGCAAGTGGATGCTGGTCCACAGGACTGAGGTGATCAAGTACACACTGGACCCTGTGTGGAAGCCATT
CACAGTGCCCTTGGTGTCCCTGTGTGATGGGGACATGGAGAAGCCCATCCAGGTCATGTGCTACGACTATGACAATGACGGGGGCCATGA
CTTCATCGGCGAGTTCCAGACCTCAGTGTCACAGATGTGTGAGGCTCGAGACAGCGTCCCGCTGGAGTTCGAGTGCATCAACCCCAAGAA
GCAGAGGAAGAAGAAGAACTATAAAAACTCGGGCATCATCATCCTGCGATCCTGCAAGATAAACCGAGACTACTCCTTCCTTGACTACAT
CCTGGGAGGCTGCCAGCTCATGTTCACCGTTGGAATAGACTTTACAGCCTCCAACGGGAATCCCCTCGACCCTTCCTCTTTGCACTATAT
CAACCCTATGGGCACCAACGAATATCTGTCGGCCATCTGGGCTGTTGGGCAGATCATTCAGGACTACGACAGTGATAAGATGTTTCCAGC
TCTGGGATTCGGGGCCCAGTTACCCCCAGACTGGAAGGTCTCCCATGAGTTTGCCATCAACTTCAACCCCACCAACCCCTTCTGCTCAGG
TGTGGATGGTATTGCCCAGGCGTACTCAGCTTGCCTGCCCCACATCCGCTTCTACGGTCCTACCAATTTCTCCCCCATCGTCAACCACGT
GGCCCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGCCACGAGCATTTCCGACATGTGGACCATGGTAAAACAAATGACAGACGTGTT
GTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGCGCATGGAGTTTGTCAGGCAGGCCTTGGCGTACCTTGAGCA
GAGTTATAAGAATTACACCCTTGTGACTGTCTTTGGAAATTTGCATCAGGCCCAGCTGGGCGGGGTGCCTGGGACTTACCAATTGGTTCG
AAGTTTCCTGAACATTAAACTGCCAGCTCCCTTGCCTGGACTACAGGATGGAGAGGTGGAAGGCCATCCTGTGTGGGCGCTAATTTACTA
CTGCATGCGCTGTGGAGACCTGCTTGCCGCTTCACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAGTTTAAAACCTGGTTCCAGGA
GTACATGAACAGCAAGGACAGAAGATTGTCCCCAGCTACGGAAAACAAGCTCCGGCTGCATTACCGTAGGGCCCTCAGGAACAATACAGA
TCCCTACAAGCGGGCCGTGTACTGTATCATTGGCAGATGTGACGTCACCGACAACCAGAGTGAAGTGGCGGACAAAACTGAGGATTACCT
GTGGCTGAAGTTGAACCAAGTGTGTTTTGACGACGATGGCACCAGCTCCCCACAAGACAGGCTCACTCTCTCACAGTTCCAGAAGCAGTT
GTTGGAAGACTATGGCGAGTCCCACTTTACGGTGAACCAGCAACCCTTCCTCTACTTCCAAGTCCTGTTCCTGACAGCGCAGTTTGAAGC
AGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCATGCTGTCCATGTAGCACTGGTGCTGTTTGAGCTGAAGCTGCTTTTAAA
GTCCTCTGGACAGAGTGCTCAGCTCCTCAGCCACGAGCCTGGTGACCCTCCTTGCTTGCGGCGGCTGAACTTCGTGCGGCTCCTCATGCT
GTACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGGCCCTCCAGTACTTCTATTTCCTCAGGGATGAGAAAGATAGTCAAGGAGAAAA
CATGTTTCTGCGCTGTGTGAGTGAGCTTGTGATTGAAAGCCGAGAGTTCGATATGATTCTTGGGAAACTAGAGAATGACGGAAGTAGAAA
GCCTGGAGTCATAGATAAGTTTACTAGTGACACAAAGCCTATTATCAACAAAGTTGCTTCTGTGGCAGAAAATAAAGGACTGTTTGAAGA
GGCAGCAAAGCTGTATGACCTTGCCAAGAATGCTGACAAGGTACTGGAGCTGATGAACAAACTGCTGAGCCCTGTCGTCCCCCAGATCAG
TGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGCACTCTCCATTGCCGAACGGTATAGGGCTCAAGGAATAAGCGCAAATAAATT
TGTGGACTCCACGTTCTATCTTCTTTTGGACTTGATCACCTTTTTTGACGAGTATCATAGTGGTCATATTGATAGAGCTTTTGATATCAT
TGAGCGCTTGAAGCTGGTGCCCCTGAATCAGGAAAGTGTGGAAGAGAGAGTGGCTGCCTTCAGAAATTTCAGTGATGAAATCAGGCACAA
CCTCTCAGAAGTGCTTCTTGCCACCATGAACATCTTGTTCACACAGTTTAAGAGGCTCAAGGGGACAAGTCCATCCTCGTCATCCAGGCC
CCAGCGAGTCATCGAGGACCGCGACTCTCAACTCCGAAGTCAAGCCCGCACTCTGATTACCTTTGCTGGAATGATACCATACCGAACGTC
TGGGGACACCAATGCGAGGCTGGTGCAGATGGAGGTCCTCATGAATTAAGTGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGT
ACATCAGGCACATGGGCCCACTAGGCTGGGGTTTCTGGTTTTGTTTCTGTTGTGTTTTGTTTTGGTTTCTGTATTATGTATTTTTGTCAA

>In-frame_ENST00000535318_ENST00000564887_TCGA-BS-A0U9_CPNE2_chr16_57171194_+_NUP93_chr16_56857618_length(amino acids)=1067AA_start in transcript=265_stop in transcript=3468
MENGHSMKAWFYGIPPGIGPDCQELLPPPPAPMAHIPSGGAPAAGAAPMGPQYCVCKVELSVSGQNLLDRDVTSKSDPFCVLFTENNGRW
IEYDRTETAINNLNPAFSKKFVLDYHFEEVQKLKFALFDQDKSSMRLDEHDFLGQFSCSLGTIVSSKKITRPLLLLNDKPAGKGLITIAA
QELSDNRVITLSLAGRRLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTLDPVWKPFTVPLVSLCDGDMEKPIQVMCYDYDNDGG
HDFIGEFQTSVSQMCEARDSVPLEFECINPKKQRKKKNYKNSGIIILRSCKINRDYSFLDYILGGCQLMFTVGIDFTASNGNPLDPSSLH
YINPMGTNEYLSAIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNPTNPFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVN
HVARFAAQATQQRTATSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQL
VRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNN
TDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQF
EAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQG
ENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQ
ISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIR

--------------------------------------------------------------
>In-frame_ENST00000565874_ENST00000308159_TCGA-BS-A0U9_CPNE2_chr16_57171194_+_NUP93_chr16_56857618_length(transcript)=3460nt_BP=1494nt
TTTCTTCAAACCTTTGCCTATGTTATTTGACAACCCGCCTCAATTTGCCTTCCATCTCTCCACTCACCTCTTAAAGGCCAGGTGGTAATG
CCTCCCTATGGTGGGGCAGCATAGCAGGTGTCTGTCCACTCTCTGACCCTCACTTCTGTTCCCCTAGACTGCCAGGAACTCCTGCCACCG
CCACCGGCTCCCATGGCCCACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTGCGTGTGCAAGGTG
GAGCTGTCAGTGAGTGGCCAGAACCTACTGGACCGGGATGTTACCTCCAAGTCCGACCCCTTCTGTGTCCTCTTTACAGAGAACAATGGC
AGATGGATCGAGTACGACAGGACAGAAACCGCGATCAACAACCTCAACCCCGCCTTCTCCAAGAAGTTCGTGCTTGACTACCACTTCGAG
GAGGTACAGAAGCTCAAGTTCGCGCTCTTTGACCAGGACAAGTCCAGTATGCGGCTGGACGAGCATGACTTCCTGGGCCAGTTCTCCTGC
AGCCTGGGCACGATCGTCTCCAGCAAGAAGATCACTAGGCCTCTGCTGCTGCTGAATGACAAGCCTGCGGGGAAGGGCTTGATTACGATC
GCTGCCCAGGAGCTGTCCGACAACCGCGTCATCACACTAAGCCTGGCGGGCAGGAGGCTGGACAAGAAGGACCTCTTTGGGAAGTCAGAC
CCCTTTCTGGAGTTTTATAAGCCAGGAGACGATGGCAAGTGGATGCTGGTCCACAGGACTGAGGTGATCAAGTACACACTGGACCCTGTG
TGGAAGCCATTCACAGTGCCCTTGGTGTCCCTGTGTGATGGGGACATGGAGAAGCCCATCCAGGTCATGTGCTACGACTATGACAATGAC
GGGGGCCATGACTTCATCGGCGAGTTCCAGACCTCAGTGTCACAGATGTGTGAGGCTCGAGACAGCGTCCCGCTGGAGTTCGAGTGCATC
AACCCCAAGAAGCAGAGGAAGAAGAAGAACTATAAAAACTCGGGCATCATCATCCTGCGATCCTGCAAGATAAACCGAGACTACTCCTTC
CTTGACTACATCCTGGGAGGCTGCCAGCTCATGTTCACCGTTGGAATAGACTTTACAGCCTCCAACGGGAATCCCCTCGACCCTTCCTCT
TTGCACTATATCAACCCTATGGGCACCAACGAATATCTGTCGGCCATCTGGGCTGTTGGGCAGATCATTCAGGACTACGACAGTGATAAG
ATGTTTCCAGCTCTGGGATTCGGGGCCCAGTTACCCCCAGACTGGAAGGTCTCCCATGAGTTTGCCATCAACTTCAACCCCACCAACCCC
TTCTGCTCAGGTGTGGATGGTATTGCCCAGGCGTACTCAGCTTGCCTGCCCCACATCCGCTTCTACGGTCCTACCAATTTCTCCCCCATC
GTCAACCACGTGGCCCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGCCACGAGCATTTCCGACATGTGGACCATGGTAAAACAAATG
ACAGACGTGTTGTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGCGCATGGAGTTTGTCAGGCAGGCCTTGGCG
TACCTTGAGCAGAGTTATAAGAATTACACCCTTGTGACTGTCTTTGGAAATTTGCATCAGGCCCAGCTGGGCGGGGTGCCTGGGACTTAC
CAATTGGTTCGAAGTTTCCTGAACATTAAACTGCCAGCTCCCTTGCCTGGACTACAGGATGGAGAGGTGGAAGGCCATCCTGTGTGGGCG
CTAATTTACTACTGCATGCGCTGTGGAGACCTGCTTGCCGCTTCACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAGTTTAAAACC
TGGTTCCAGGAGTACATGAACAGCAAGGACAGAAGATTGTCCCCAGCTACGGAAAACAAGCTCCGGCTGCATTACCGTAGGGCCCTCAGG
AACAATACAGATCCCTACAAGCGGGCCGTGTACTGTATCATTGGCAGATGTGACGTCACCGACAACCAGAGTGAAGTGGCGGACAAAACT
GAGGATTACCTGTGGCTGAAGTTGAACCAAGTGTGTTTTGACGACGATGGCACCAGCTCCCCACAAGACAGGCTCACTCTCTCACAGTTC
CAGAAGCAGTTGTTGGAAGACTATGGCGAGTCCCACTTTACGGTGAACCAGCAACCCTTCCTCTACTTCCAAGTCCTGTTCCTGACAGCG
CAGTTTGAAGCAGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCATGCTGTCCATGTAGCACTGGTGCTGTTTGAGCTGAAG
CTGCTTTTAAAGTCCTCTGGACAGAGTGCTCAGCTCCTCAGCCACGAGCCTGGTGACCCTCCTTGCTTGCGGCGGCTGAACTTCGTGCGG
CTCCTCATGCTGTACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGGCCCTCCAGTACTTCTATTTCCTCAGGGATGAGAAAGATAGT
CAAGGAGAAAACATGTTTCTGCGCTGTGTGAGTGAGCTTGTGATTGAAAGCCGAGAGTTCGATATGATTCTTGGGAAACTAGAGAATGAC
GGAAGTAGAAAGCCTGGAGTCATAGATAAGTTTACTAGTGACACAAAGCCTATTATCAACAAAGTTGCTTCTGTGGCAGAAAATAAAGGA
CTGTTTGAAGAGGCAGCAAAGCTGTATGACCTTGCCAAGAATGCTGACAAGGTACTGGAGCTGATGAACAAACTGCTGAGCCCTGTCGTC
CCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGCACTCTCCATTGCCGAACGGTATAGGGCTCAAGGAATAAGC
GCAAATAAATTTGTGGACTCCACGTTCTATCTTCTTTTGGACTTGATCACCTTTTTTGACGAGTATCATAGTGGTCATATTGATAGAGCT
TTTGATATCATTGAGCGCTTGAAGCTGGTGCCCCTGAATCAGGAAAGTGTGGAAGAGAGAGTGGCTGCCTTCAGAAATTTCAGTGATGAA
ATCAGGCACAACCTCTCAGAAGTGCTTCTTGCCACCATGAACATCTTGTTCACACAGTTTAAGAGGCTCAAGGGGACAAGTCCATCCTCG
TCATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACTCTCAACTCCGAAGTCAAGCCCGCACTCTGATTACCTTTGCTGGAATGATACCA
TACCGAACGTCTGGGGACACCAATGCGAGGCTGGTGCAGATGGAGGTCCTCATGAATTAAGTGCCATGCTTTGTGGGAGTCTGGGTCGGC
ACACTGTCAGTACATCAGGCACATGGGCCCACTAGGCTGGGGTTTCTGGTTTTGTTTCTGTTGTGTTTTGTTTTGGTTTCTGTATTATGT

>In-frame_ENST00000565874_ENST00000308159_TCGA-BS-A0U9_CPNE2_chr16_57171194_+_NUP93_chr16_56857618_length(amino acids)=1055AA_start in transcript=132_stop in transcript=3299
MTLTSVPLDCQELLPPPPAPMAHIPSGGAPAAGAAPMGPQYCVCKVELSVSGQNLLDRDVTSKSDPFCVLFTENNGRWIEYDRTETAINN
LNPAFSKKFVLDYHFEEVQKLKFALFDQDKSSMRLDEHDFLGQFSCSLGTIVSSKKITRPLLLLNDKPAGKGLITIAAQELSDNRVITLS
LAGRRLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTLDPVWKPFTVPLVSLCDGDMEKPIQVMCYDYDNDGGHDFIGEFQTSVS
QMCEARDSVPLEFECINPKKQRKKKNYKNSGIIILRSCKINRDYSFLDYILGGCQLMFTVGIDFTASNGNPLDPSSLHYINPMGTNEYLS
AIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNPTNPFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVNHVARFAAQATQQ
RTATSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAP
LPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCII
GRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMER
LRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELV
IESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKERLK
NMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMN

--------------------------------------------------------------
>In-frame_ENST00000565874_ENST00000569842_TCGA-BS-A0U9_CPNE2_chr16_57171194_+_NUP93_chr16_56857618_length(transcript)=3578nt_BP=1494nt
TTTCTTCAAACCTTTGCCTATGTTATTTGACAACCCGCCTCAATTTGCCTTCCATCTCTCCACTCACCTCTTAAAGGCCAGGTGGTAATG
CCTCCCTATGGTGGGGCAGCATAGCAGGTGTCTGTCCACTCTCTGACCCTCACTTCTGTTCCCCTAGACTGCCAGGAACTCCTGCCACCG
CCACCGGCTCCCATGGCCCACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTGCGTGTGCAAGGTG
GAGCTGTCAGTGAGTGGCCAGAACCTACTGGACCGGGATGTTACCTCCAAGTCCGACCCCTTCTGTGTCCTCTTTACAGAGAACAATGGC
AGATGGATCGAGTACGACAGGACAGAAACCGCGATCAACAACCTCAACCCCGCCTTCTCCAAGAAGTTCGTGCTTGACTACCACTTCGAG
GAGGTACAGAAGCTCAAGTTCGCGCTCTTTGACCAGGACAAGTCCAGTATGCGGCTGGACGAGCATGACTTCCTGGGCCAGTTCTCCTGC
AGCCTGGGCACGATCGTCTCCAGCAAGAAGATCACTAGGCCTCTGCTGCTGCTGAATGACAAGCCTGCGGGGAAGGGCTTGATTACGATC
GCTGCCCAGGAGCTGTCCGACAACCGCGTCATCACACTAAGCCTGGCGGGCAGGAGGCTGGACAAGAAGGACCTCTTTGGGAAGTCAGAC
CCCTTTCTGGAGTTTTATAAGCCAGGAGACGATGGCAAGTGGATGCTGGTCCACAGGACTGAGGTGATCAAGTACACACTGGACCCTGTG
TGGAAGCCATTCACAGTGCCCTTGGTGTCCCTGTGTGATGGGGACATGGAGAAGCCCATCCAGGTCATGTGCTACGACTATGACAATGAC
GGGGGCCATGACTTCATCGGCGAGTTCCAGACCTCAGTGTCACAGATGTGTGAGGCTCGAGACAGCGTCCCGCTGGAGTTCGAGTGCATC
AACCCCAAGAAGCAGAGGAAGAAGAAGAACTATAAAAACTCGGGCATCATCATCCTGCGATCCTGCAAGATAAACCGAGACTACTCCTTC
CTTGACTACATCCTGGGAGGCTGCCAGCTCATGTTCACCGTTGGAATAGACTTTACAGCCTCCAACGGGAATCCCCTCGACCCTTCCTCT
TTGCACTATATCAACCCTATGGGCACCAACGAATATCTGTCGGCCATCTGGGCTGTTGGGCAGATCATTCAGGACTACGACAGTGATAAG
ATGTTTCCAGCTCTGGGATTCGGGGCCCAGTTACCCCCAGACTGGAAGGTCTCCCATGAGTTTGCCATCAACTTCAACCCCACCAACCCC
TTCTGCTCAGGTGTGGATGGTATTGCCCAGGCGTACTCAGCTTGCCTGCCCCACATCCGCTTCTACGGTCCTACCAATTTCTCCCCCATC
GTCAACCACGTGGCCCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGCCACGAGCATTTCCGACATGTGGACCATGGTAAAACAAATG
ACAGACGTGTTGTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGCGCATGGAGTTTGTCAGGCAGGCCTTGGCG
TACCTTGAGCAGAGTTATAAGAATTACACCCTTGTGACTGTCTTTGGAAATTTGCATCAGGCCCAGCTGGGCGGGGTGCCTGGGACTTAC
CAATTGGTTCGAAGTTTCCTGAACATTAAACTGCCAGCTCCCTTGCCTGGACTACAGGATGGAGAGGTGGAAGGCCATCCTGTGTGGGCG
CTAATTTACTACTGCATGCGCTGTGGAGACCTGCTTGCCGCTTCACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAGTTTAAAACC
TGGTTCCAGGAGTACATGAACAGCAAGGACAGAAGATTGTCCCCAGCTACGGAAAACAAGCTCCGGCTGCATTACCGTAGGGCCCTCAGG
AACAATACAGATCCCTACAAGCGGGCCGTGTACTGTATCATTGGCAGATGTGACGTCACCGACAACCAGAGTGAAGTGGCGGACAAAACT
GAGGATTACCTGTGGCTGAAGTTGAACCAAGTGTGTTTTGACGACGATGGCACCAGCTCCCCACAAGACAGGCTCACTCTCTCACAGTTC
CAGAAGCAGTTGTTGGAAGACTATGGCGAGTCCCACTTTACGGTGAACCAGCAACCCTTCCTCTACTTCCAAGTCCTGTTCCTGACAGCG
CAGTTTGAAGCAGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCATGCTGTCCATGTAGCACTGGTGCTGTTTGAGCTGAAG
CTGCTTTTAAAGTCCTCTGGACAGAGTGCTCAGCTCCTCAGCCACGAGCCTGGTGACCCTCCTTGCTTGCGGCGGCTGAACTTCGTGCGG
CTCCTCATGCTGTACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGGCCCTCCAGTACTTCTATTTCCTCAGGGATGAGAAAGATAGT
CAAGGAGAAAACATGTTTCTGCGCTGTGTGAGTGAGCTTGTGATTGAAAGCCGAGAGTTCGATATGATTCTTGGGAAACTAGAGAATGAC
GGAAGTAGAAAGCCTGGAGTCATAGATAAGTTTACTAGTGACACAAAGCCTATTATCAACAAAGTTGCTTCTGTGGCAGAAAATAAAGGA
CTGTTTGAAGAGGCAGCAAAGCTGTATGACCTTGCCAAGAATGCTGACAAGGTACTGGAGCTGATGAACAAACTGCTGAGCCCTGTCGTC
CCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGCACTCTCCATTGCCGAACGGTATAGGGCTCAAGGAATAAGC
GCAAATAAATTTGTGGACTCCACGTTCTATCTTCTTTTGGACTTGATCACCTTTTTTGACGAGTATCATAGTGGTCATATTGATAGAGCT
TTTGATATCATTGAGCGCTTGAAGCTGGTGCCCCTGAATCAGGAAAGTGTGGAAGAGAGAGTGGCTGCCTTCAGAAATTTCAGTGATGAA
ATCAGGCACAACCTCTCAGAAGTGCTTCTTGCCACCATGAACATCTTGTTCACACAGTTTAAGAGGCTCAAGGGGACAAGTCCATCCTCG
TCATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACTCTGGCCTGGCTCTGTTGCCCAGGCTGGAATGCAATGACACGATCTCAGCTCAC
TGCAACCTCTACCTCTTGGGCTCAAGCCACCCTCCCACCTCACCCTCCCAAGTAGCTGGGACTACAGCAACTCCGAAGTCAAGCCCGCAC
TCTGATTACCTTTGCTGGAATGATACCATACCGAACGTCTGGGGACACCAATGCGAGGCTGGTGCAGATGGAGGTCCTCATGAATTAAGT
GCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCACTAGGCTGGGGTTTCTGGTTTTGTTTCTGTT

>In-frame_ENST00000565874_ENST00000569842_TCGA-BS-A0U9_CPNE2_chr16_57171194_+_NUP93_chr16_56857618_length(amino acids)=1116AA_start in transcript=132_stop in transcript=3482
MTLTSVPLDCQELLPPPPAPMAHIPSGGAPAAGAAPMGPQYCVCKVELSVSGQNLLDRDVTSKSDPFCVLFTENNGRWIEYDRTETAINN
LNPAFSKKFVLDYHFEEVQKLKFALFDQDKSSMRLDEHDFLGQFSCSLGTIVSSKKITRPLLLLNDKPAGKGLITIAAQELSDNRVITLS
LAGRRLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTLDPVWKPFTVPLVSLCDGDMEKPIQVMCYDYDNDGGHDFIGEFQTSVS
QMCEARDSVPLEFECINPKKQRKKKNYKNSGIIILRSCKINRDYSFLDYILGGCQLMFTVGIDFTASNGNPLDPSSLHYINPMGTNEYLS
AIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNPTNPFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVNHVARFAAQATQQ
RTATSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAP
LPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCII
GRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMER
LRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELV
IESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKERLK
NMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMN
ILFTQFKRLKGTSPSSSSRPQRVIEDRDSGLALLPRLECNDTISAHCNLYLLGSSHPPTSPSQVAGTTATPKSSPHSDYLCWNDTIPNVW

--------------------------------------------------------------
>In-frame_ENST00000565874_ENST00000564887_TCGA-BS-A0U9_CPNE2_chr16_57171194_+_NUP93_chr16_56857618_length(transcript)=3455nt_BP=1494nt
TTTCTTCAAACCTTTGCCTATGTTATTTGACAACCCGCCTCAATTTGCCTTCCATCTCTCCACTCACCTCTTAAAGGCCAGGTGGTAATG
CCTCCCTATGGTGGGGCAGCATAGCAGGTGTCTGTCCACTCTCTGACCCTCACTTCTGTTCCCCTAGACTGCCAGGAACTCCTGCCACCG
CCACCGGCTCCCATGGCCCACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTGCGTGTGCAAGGTG
GAGCTGTCAGTGAGTGGCCAGAACCTACTGGACCGGGATGTTACCTCCAAGTCCGACCCCTTCTGTGTCCTCTTTACAGAGAACAATGGC
AGATGGATCGAGTACGACAGGACAGAAACCGCGATCAACAACCTCAACCCCGCCTTCTCCAAGAAGTTCGTGCTTGACTACCACTTCGAG
GAGGTACAGAAGCTCAAGTTCGCGCTCTTTGACCAGGACAAGTCCAGTATGCGGCTGGACGAGCATGACTTCCTGGGCCAGTTCTCCTGC
AGCCTGGGCACGATCGTCTCCAGCAAGAAGATCACTAGGCCTCTGCTGCTGCTGAATGACAAGCCTGCGGGGAAGGGCTTGATTACGATC
GCTGCCCAGGAGCTGTCCGACAACCGCGTCATCACACTAAGCCTGGCGGGCAGGAGGCTGGACAAGAAGGACCTCTTTGGGAAGTCAGAC
CCCTTTCTGGAGTTTTATAAGCCAGGAGACGATGGCAAGTGGATGCTGGTCCACAGGACTGAGGTGATCAAGTACACACTGGACCCTGTG
TGGAAGCCATTCACAGTGCCCTTGGTGTCCCTGTGTGATGGGGACATGGAGAAGCCCATCCAGGTCATGTGCTACGACTATGACAATGAC
GGGGGCCATGACTTCATCGGCGAGTTCCAGACCTCAGTGTCACAGATGTGTGAGGCTCGAGACAGCGTCCCGCTGGAGTTCGAGTGCATC
AACCCCAAGAAGCAGAGGAAGAAGAAGAACTATAAAAACTCGGGCATCATCATCCTGCGATCCTGCAAGATAAACCGAGACTACTCCTTC
CTTGACTACATCCTGGGAGGCTGCCAGCTCATGTTCACCGTTGGAATAGACTTTACAGCCTCCAACGGGAATCCCCTCGACCCTTCCTCT
TTGCACTATATCAACCCTATGGGCACCAACGAATATCTGTCGGCCATCTGGGCTGTTGGGCAGATCATTCAGGACTACGACAGTGATAAG
ATGTTTCCAGCTCTGGGATTCGGGGCCCAGTTACCCCCAGACTGGAAGGTCTCCCATGAGTTTGCCATCAACTTCAACCCCACCAACCCC
TTCTGCTCAGGTGTGGATGGTATTGCCCAGGCGTACTCAGCTTGCCTGCCCCACATCCGCTTCTACGGTCCTACCAATTTCTCCCCCATC
GTCAACCACGTGGCCCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGCCACGAGCATTTCCGACATGTGGACCATGGTAAAACAAATG
ACAGACGTGTTGTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGCGCATGGAGTTTGTCAGGCAGGCCTTGGCG
TACCTTGAGCAGAGTTATAAGAATTACACCCTTGTGACTGTCTTTGGAAATTTGCATCAGGCCCAGCTGGGCGGGGTGCCTGGGACTTAC
CAATTGGTTCGAAGTTTCCTGAACATTAAACTGCCAGCTCCCTTGCCTGGACTACAGGATGGAGAGGTGGAAGGCCATCCTGTGTGGGCG
CTAATTTACTACTGCATGCGCTGTGGAGACCTGCTTGCCGCTTCACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAGTTTAAAACC
TGGTTCCAGGAGTACATGAACAGCAAGGACAGAAGATTGTCCCCAGCTACGGAAAACAAGCTCCGGCTGCATTACCGTAGGGCCCTCAGG
AACAATACAGATCCCTACAAGCGGGCCGTGTACTGTATCATTGGCAGATGTGACGTCACCGACAACCAGAGTGAAGTGGCGGACAAAACT
GAGGATTACCTGTGGCTGAAGTTGAACCAAGTGTGTTTTGACGACGATGGCACCAGCTCCCCACAAGACAGGCTCACTCTCTCACAGTTC
CAGAAGCAGTTGTTGGAAGACTATGGCGAGTCCCACTTTACGGTGAACCAGCAACCCTTCCTCTACTTCCAAGTCCTGTTCCTGACAGCG
CAGTTTGAAGCAGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCATGCTGTCCATGTAGCACTGGTGCTGTTTGAGCTGAAG
CTGCTTTTAAAGTCCTCTGGACAGAGTGCTCAGCTCCTCAGCCACGAGCCTGGTGACCCTCCTTGCTTGCGGCGGCTGAACTTCGTGCGG
CTCCTCATGCTGTACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGGCCCTCCAGTACTTCTATTTCCTCAGGGATGAGAAAGATAGT
CAAGGAGAAAACATGTTTCTGCGCTGTGTGAGTGAGCTTGTGATTGAAAGCCGAGAGTTCGATATGATTCTTGGGAAACTAGAGAATGAC
GGAAGTAGAAAGCCTGGAGTCATAGATAAGTTTACTAGTGACACAAAGCCTATTATCAACAAAGTTGCTTCTGTGGCAGAAAATAAAGGA
CTGTTTGAAGAGGCAGCAAAGCTGTATGACCTTGCCAAGAATGCTGACAAGGTACTGGAGCTGATGAACAAACTGCTGAGCCCTGTCGTC
CCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGCACTCTCCATTGCCGAACGGTATAGGGCTCAAGGAATAAGC
GCAAATAAATTTGTGGACTCCACGTTCTATCTTCTTTTGGACTTGATCACCTTTTTTGACGAGTATCATAGTGGTCATATTGATAGAGCT
TTTGATATCATTGAGCGCTTGAAGCTGGTGCCCCTGAATCAGGAAAGTGTGGAAGAGAGAGTGGCTGCCTTCAGAAATTTCAGTGATGAA
ATCAGGCACAACCTCTCAGAAGTGCTTCTTGCCACCATGAACATCTTGTTCACACAGTTTAAGAGGCTCAAGGGGACAAGTCCATCCTCG
TCATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACTCTCAACTCCGAAGTCAAGCCCGCACTCTGATTACCTTTGCTGGAATGATACCA
TACCGAACGTCTGGGGACACCAATGCGAGGCTGGTGCAGATGGAGGTCCTCATGAATTAAGTGCCATGCTTTGTGGGAGTCTGGGTCGGC
ACACTGTCAGTACATCAGGCACATGGGCCCACTAGGCTGGGGTTTCTGGTTTTGTTTCTGTTGTGTTTTGTTTTGGTTTCTGTATTATGT

>In-frame_ENST00000565874_ENST00000564887_TCGA-BS-A0U9_CPNE2_chr16_57171194_+_NUP93_chr16_56857618_length(amino acids)=1055AA_start in transcript=132_stop in transcript=3299
MTLTSVPLDCQELLPPPPAPMAHIPSGGAPAAGAAPMGPQYCVCKVELSVSGQNLLDRDVTSKSDPFCVLFTENNGRWIEYDRTETAINN
LNPAFSKKFVLDYHFEEVQKLKFALFDQDKSSMRLDEHDFLGQFSCSLGTIVSSKKITRPLLLLNDKPAGKGLITIAAQELSDNRVITLS
LAGRRLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTLDPVWKPFTVPLVSLCDGDMEKPIQVMCYDYDNDGGHDFIGEFQTSVS
QMCEARDSVPLEFECINPKKQRKKKNYKNSGIIILRSCKINRDYSFLDYILGGCQLMFTVGIDFTASNGNPLDPSSLHYINPMGTNEYLS
AIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNPTNPFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVNHVARFAAQATQQ
RTATSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAP
LPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCII
GRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMER
LRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELV
IESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKERLK
NMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMN

--------------------------------------------------------------
>In-frame_ENST00000290776_ENST00000308159_TCGA-BS-A0U9-01B_CPNE2_chr16_57171194_+_NUP93_chr16_56857619_length(transcript)=3557nt_BP=1591nt
CCCTCCTCGGCCGGAGGGAGGAGCCCGAGCCGCCGCCGCCGCCGCCGCCCGCCCGCCCGGCCCGGGAGGAGGACCGGACCCCGAGCGGCT
GGGAGCGCACGCGAGCGGGCCGTGGCCGCGCGGGCAGCGCCCTGAGCCTGTCCCGCGCCCGCGGGCCCGGCCGAGCAGGAGCAGCTCCCG
GGGATGCCCGGGCGGCTCGGAGCGCGGGCAGCGGCAGCCGTGCGGTGAGGGCGGTGGCGCCCGCGGGACCTGCGACTGCCAGGAACTCCT
GCCACCGCCACCGGCTCCCATGGCCCACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTGCGTGTG
CAAGGTGGAGCTGTCAGTGAGTGGCCAGAACCTACTGGACCGGGATGTTACCTCCAAGTCCGACCCCTTCTGTGTCCTCTTTACAGAGAA
CAATGGCAGATGGATCGAGTACGACAGGACAGAAACCGCGATCAACAACCTCAACCCCGCCTTCTCCAAGAAGTTCGTGCTTGACTACCA
CTTCGAGGAGGTACAGAAGCTCAAGTTCGCGCTCTTTGACCAGGACAAGTCCAGTATGCGGCTGGACGAGCATGACTTCCTGGGCCAGTT
CTCCTGCAGCCTGGGCACGATCGTCTCCAGCAAGAAGATCACTAGGCCTCTGCTGCTGCTGAATGACAAGCCTGCGGGGAAGGGCTTGAT
TACGATCGCTGCCCAGGAGCTGTCCGACAACCGCGTCATCACACTAAGCCTGGCGGGCAGGAGGCTGGACAAGAAGGACCTCTTTGGGAA
GTCAGACCCCTTTCTGGAGTTTTATAAGCCAGGAGACGATGGCAAGTGGATGCTGGTCCACAGGACTGAGGTGATCAAGTACACACTGGA
CCCTGTGTGGAAGCCATTCACAGTGCCCTTGGTGTCCCTGTGTGATGGGGACATGGAGAAGCCCATCCAGGTCATGTGCTACGACTATGA
CAATGACGGGGGCCATGACTTCATCGGCGAGTTCCAGACCTCAGTGTCACAGATGTGTGAGGCTCGAGACAGCGTCCCGCTGGAGTTCGA
GTGCATCAACCCCAAGAAGCAGAGGAAGAAGAAGAACTATAAAAACTCGGGCATCATCATCCTGCGATCCTGCAAGATAAACCGAGACTA
CTCCTTCCTTGACTACATCCTGGGAGGCTGCCAGCTCATGTTCACCGTTGGAATAGACTTTACAGCCTCCAACGGGAATCCCCTCGACCC
TTCCTCTTTGCACTATATCAACCCTATGGGCACCAACGAATATCTGTCGGCCATCTGGGCTGTTGGGCAGATCATTCAGGACTACGACAG
TGATAAGATGTTTCCAGCTCTGGGATTCGGGGCCCAGTTACCCCCAGACTGGAAGGTCTCCCATGAGTTTGCCATCAACTTCAACCCCAC
CAACCCCTTCTGCTCAGGTGTGGATGGTATTGCCCAGGCGTACTCAGCTTGCCTGCCCCACATCCGCTTCTACGGTCCTACCAATTTCTC
CCCCATCGTCAACCACGTGGCCCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGCCACGAGCATTTCCGACATGTGGACCATGGTAAA
ACAAATGACAGACGTGTTGTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGCGCATGGAGTTTGTCAGGCAGGC
CTTGGCGTACCTTGAGCAGAGTTATAAGAATTACACCCTTGTGACTGTCTTTGGAAATTTGCATCAGGCCCAGCTGGGCGGGGTGCCTGG
GACTTACCAATTGGTTCGAAGTTTCCTGAACATTAAACTGCCAGCTCCCTTGCCTGGACTACAGGATGGAGAGGTGGAAGGCCATCCTGT
GTGGGCGCTAATTTACTACTGCATGCGCTGTGGAGACCTGCTTGCCGCTTCACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAGTT
TAAAACCTGGTTCCAGGAGTACATGAACAGCAAGGACAGAAGATTGTCCCCAGCTACGGAAAACAAGCTCCGGCTGCATTACCGTAGGGC
CCTCAGGAACAATACAGATCCCTACAAGCGGGCCGTGTACTGTATCATTGGCAGATGTGACGTCACCGACAACCAGAGTGAAGTGGCGGA
CAAAACTGAGGATTACCTGTGGCTGAAGTTGAACCAAGTGTGTTTTGACGACGATGGCACCAGCTCCCCACAAGACAGGCTCACTCTCTC
ACAGTTCCAGAAGCAGTTGTTGGAAGACTATGGCGAGTCCCACTTTACGGTGAACCAGCAACCCTTCCTCTACTTCCAAGTCCTGTTCCT
GACAGCGCAGTTTGAAGCAGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCATGCTGTCCATGTAGCACTGGTGCTGTTTGA
GCTGAAGCTGCTTTTAAAGTCCTCTGGACAGAGTGCTCAGCTCCTCAGCCACGAGCCTGGTGACCCTCCTTGCTTGCGGCGGCTGAACTT
CGTGCGGCTCCTCATGCTGTACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGGCCCTCCAGTACTTCTATTTCCTCAGGGATGAGAA
AGATAGTCAAGGAGAAAACATGTTTCTGCGCTGTGTGAGTGAGCTTGTGATTGAAAGCCGAGAGTTCGATATGATTCTTGGGAAACTAGA
GAATGACGGAAGTAGAAAGCCTGGAGTCATAGATAAGTTTACTAGTGACACAAAGCCTATTATCAACAAAGTTGCTTCTGTGGCAGAAAA
TAAAGGACTGTTTGAAGAGGCAGCAAAGCTGTATGACCTTGCCAAGAATGCTGACAAGGTACTGGAGCTGATGAACAAACTGCTGAGCCC
TGTCGTCCCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGCACTCTCCATTGCCGAACGGTATAGGGCTCAAGG
AATAAGCGCAAATAAATTTGTGGACTCCACGTTCTATCTTCTTTTGGACTTGATCACCTTTTTTGACGAGTATCATAGTGGTCATATTGA
TAGAGCTTTTGATATCATTGAGCGCTTGAAGCTGGTGCCCCTGAATCAGGAAAGTGTGGAAGAGAGAGTGGCTGCCTTCAGAAATTTCAG
TGATGAAATCAGGCACAACCTCTCAGAAGTGCTTCTTGCCACCATGAACATCTTGTTCACACAGTTTAAGAGGCTCAAGGGGACAAGTCC
ATCCTCGTCATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACTCTCAACTCCGAAGTCAAGCCCGCACTCTGATTACCTTTGCTGGAAT
GATACCATACCGAACGTCTGGGGACACCAATGCGAGGCTGGTGCAGATGGAGGTCCTCATGAATTAAGTGCCATGCTTTGTGGGAGTCTG
GGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCACTAGGCTGGGGTTTCTGGTTTTGTTTCTGTTGTGTTTTGTTTTGGTTTCTGT

>In-frame_ENST00000290776_ENST00000308159_TCGA-BS-A0U9-01B_CPNE2_chr16_57171194_+_NUP93_chr16_56857619_length(amino acids)=1102AA_start in transcript=88_stop in transcript=3396
MGAHASGPWPRGQRPEPVPRPRARPSRSSSRGCPGGSERGQRQPCGEGGGARGTCDCQELLPPPPAPMAHIPSGGAPAAGAAPMGPQYCV
CKVELSVSGQNLLDRDVTSKSDPFCVLFTENNGRWIEYDRTETAINNLNPAFSKKFVLDYHFEEVQKLKFALFDQDKSSMRLDEHDFLGQ
FSCSLGTIVSSKKITRPLLLLNDKPAGKGLITIAAQELSDNRVITLSLAGRRLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTL
DPVWKPFTVPLVSLCDGDMEKPIQVMCYDYDNDGGHDFIGEFQTSVSQMCEARDSVPLEFECINPKKQRKKKNYKNSGIIILRSCKINRD
YSFLDYILGGCQLMFTVGIDFTASNGNPLDPSSLHYINPMGTNEYLSAIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNP
TNPFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVNHVARFAAQATQQRTATSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQ
ALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGE
FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTL
SQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLN
FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAE
NKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
DRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTSPSSSSRPQRVIEDRDSQLRSQARTLITFAG

--------------------------------------------------------------
>In-frame_ENST00000290776_ENST00000569842_TCGA-BS-A0U9-01B_CPNE2_chr16_57171194_+_NUP93_chr16_56857619_length(transcript)=3675nt_BP=1591nt
CCCTCCTCGGCCGGAGGGAGGAGCCCGAGCCGCCGCCGCCGCCGCCGCCCGCCCGCCCGGCCCGGGAGGAGGACCGGACCCCGAGCGGCT
GGGAGCGCACGCGAGCGGGCCGTGGCCGCGCGGGCAGCGCCCTGAGCCTGTCCCGCGCCCGCGGGCCCGGCCGAGCAGGAGCAGCTCCCG
GGGATGCCCGGGCGGCTCGGAGCGCGGGCAGCGGCAGCCGTGCGGTGAGGGCGGTGGCGCCCGCGGGACCTGCGACTGCCAGGAACTCCT
GCCACCGCCACCGGCTCCCATGGCCCACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTGCGTGTG
CAAGGTGGAGCTGTCAGTGAGTGGCCAGAACCTACTGGACCGGGATGTTACCTCCAAGTCCGACCCCTTCTGTGTCCTCTTTACAGAGAA
CAATGGCAGATGGATCGAGTACGACAGGACAGAAACCGCGATCAACAACCTCAACCCCGCCTTCTCCAAGAAGTTCGTGCTTGACTACCA
CTTCGAGGAGGTACAGAAGCTCAAGTTCGCGCTCTTTGACCAGGACAAGTCCAGTATGCGGCTGGACGAGCATGACTTCCTGGGCCAGTT
CTCCTGCAGCCTGGGCACGATCGTCTCCAGCAAGAAGATCACTAGGCCTCTGCTGCTGCTGAATGACAAGCCTGCGGGGAAGGGCTTGAT
TACGATCGCTGCCCAGGAGCTGTCCGACAACCGCGTCATCACACTAAGCCTGGCGGGCAGGAGGCTGGACAAGAAGGACCTCTTTGGGAA
GTCAGACCCCTTTCTGGAGTTTTATAAGCCAGGAGACGATGGCAAGTGGATGCTGGTCCACAGGACTGAGGTGATCAAGTACACACTGGA
CCCTGTGTGGAAGCCATTCACAGTGCCCTTGGTGTCCCTGTGTGATGGGGACATGGAGAAGCCCATCCAGGTCATGTGCTACGACTATGA
CAATGACGGGGGCCATGACTTCATCGGCGAGTTCCAGACCTCAGTGTCACAGATGTGTGAGGCTCGAGACAGCGTCCCGCTGGAGTTCGA
GTGCATCAACCCCAAGAAGCAGAGGAAGAAGAAGAACTATAAAAACTCGGGCATCATCATCCTGCGATCCTGCAAGATAAACCGAGACTA
CTCCTTCCTTGACTACATCCTGGGAGGCTGCCAGCTCATGTTCACCGTTGGAATAGACTTTACAGCCTCCAACGGGAATCCCCTCGACCC
TTCCTCTTTGCACTATATCAACCCTATGGGCACCAACGAATATCTGTCGGCCATCTGGGCTGTTGGGCAGATCATTCAGGACTACGACAG
TGATAAGATGTTTCCAGCTCTGGGATTCGGGGCCCAGTTACCCCCAGACTGGAAGGTCTCCCATGAGTTTGCCATCAACTTCAACCCCAC
CAACCCCTTCTGCTCAGGTGTGGATGGTATTGCCCAGGCGTACTCAGCTTGCCTGCCCCACATCCGCTTCTACGGTCCTACCAATTTCTC
CCCCATCGTCAACCACGTGGCCCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGCCACGAGCATTTCCGACATGTGGACCATGGTAAA
ACAAATGACAGACGTGTTGTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGCGCATGGAGTTTGTCAGGCAGGC
CTTGGCGTACCTTGAGCAGAGTTATAAGAATTACACCCTTGTGACTGTCTTTGGAAATTTGCATCAGGCCCAGCTGGGCGGGGTGCCTGG
GACTTACCAATTGGTTCGAAGTTTCCTGAACATTAAACTGCCAGCTCCCTTGCCTGGACTACAGGATGGAGAGGTGGAAGGCCATCCTGT
GTGGGCGCTAATTTACTACTGCATGCGCTGTGGAGACCTGCTTGCCGCTTCACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAGTT
TAAAACCTGGTTCCAGGAGTACATGAACAGCAAGGACAGAAGATTGTCCCCAGCTACGGAAAACAAGCTCCGGCTGCATTACCGTAGGGC
CCTCAGGAACAATACAGATCCCTACAAGCGGGCCGTGTACTGTATCATTGGCAGATGTGACGTCACCGACAACCAGAGTGAAGTGGCGGA
CAAAACTGAGGATTACCTGTGGCTGAAGTTGAACCAAGTGTGTTTTGACGACGATGGCACCAGCTCCCCACAAGACAGGCTCACTCTCTC
ACAGTTCCAGAAGCAGTTGTTGGAAGACTATGGCGAGTCCCACTTTACGGTGAACCAGCAACCCTTCCTCTACTTCCAAGTCCTGTTCCT
GACAGCGCAGTTTGAAGCAGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCATGCTGTCCATGTAGCACTGGTGCTGTTTGA
GCTGAAGCTGCTTTTAAAGTCCTCTGGACAGAGTGCTCAGCTCCTCAGCCACGAGCCTGGTGACCCTCCTTGCTTGCGGCGGCTGAACTT
CGTGCGGCTCCTCATGCTGTACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGGCCCTCCAGTACTTCTATTTCCTCAGGGATGAGAA
AGATAGTCAAGGAGAAAACATGTTTCTGCGCTGTGTGAGTGAGCTTGTGATTGAAAGCCGAGAGTTCGATATGATTCTTGGGAAACTAGA
GAATGACGGAAGTAGAAAGCCTGGAGTCATAGATAAGTTTACTAGTGACACAAAGCCTATTATCAACAAAGTTGCTTCTGTGGCAGAAAA
TAAAGGACTGTTTGAAGAGGCAGCAAAGCTGTATGACCTTGCCAAGAATGCTGACAAGGTACTGGAGCTGATGAACAAACTGCTGAGCCC
TGTCGTCCCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGCACTCTCCATTGCCGAACGGTATAGGGCTCAAGG
AATAAGCGCAAATAAATTTGTGGACTCCACGTTCTATCTTCTTTTGGACTTGATCACCTTTTTTGACGAGTATCATAGTGGTCATATTGA
TAGAGCTTTTGATATCATTGAGCGCTTGAAGCTGGTGCCCCTGAATCAGGAAAGTGTGGAAGAGAGAGTGGCTGCCTTCAGAAATTTCAG
TGATGAAATCAGGCACAACCTCTCAGAAGTGCTTCTTGCCACCATGAACATCTTGTTCACACAGTTTAAGAGGCTCAAGGGGACAAGTCC
ATCCTCGTCATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACTCTGGCCTGGCTCTGTTGCCCAGGCTGGAATGCAATGACACGATCTC
AGCTCACTGCAACCTCTACCTCTTGGGCTCAAGCCACCCTCCCACCTCACCCTCCCAAGTAGCTGGGACTACAGCAACTCCGAAGTCAAG
CCCGCACTCTGATTACCTTTGCTGGAATGATACCATACCGAACGTCTGGGGACACCAATGCGAGGCTGGTGCAGATGGAGGTCCTCATGA
ATTAAGTGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCACTAGGCTGGGGTTTCTGGTTTTGT

>In-frame_ENST00000290776_ENST00000569842_TCGA-BS-A0U9-01B_CPNE2_chr16_57171194_+_NUP93_chr16_56857619_length(amino acids)=1163AA_start in transcript=88_stop in transcript=3579
MGAHASGPWPRGQRPEPVPRPRARPSRSSSRGCPGGSERGQRQPCGEGGGARGTCDCQELLPPPPAPMAHIPSGGAPAAGAAPMGPQYCV
CKVELSVSGQNLLDRDVTSKSDPFCVLFTENNGRWIEYDRTETAINNLNPAFSKKFVLDYHFEEVQKLKFALFDQDKSSMRLDEHDFLGQ
FSCSLGTIVSSKKITRPLLLLNDKPAGKGLITIAAQELSDNRVITLSLAGRRLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTL
DPVWKPFTVPLVSLCDGDMEKPIQVMCYDYDNDGGHDFIGEFQTSVSQMCEARDSVPLEFECINPKKQRKKKNYKNSGIIILRSCKINRD
YSFLDYILGGCQLMFTVGIDFTASNGNPLDPSSLHYINPMGTNEYLSAIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNP
TNPFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVNHVARFAAQATQQRTATSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQ
ALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGE
FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTL
SQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLN
FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAE
NKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
DRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTSPSSSSRPQRVIEDRDSGLALLPRLECNDTI

--------------------------------------------------------------
>In-frame_ENST00000290776_ENST00000564887_TCGA-BS-A0U9-01B_CPNE2_chr16_57171194_+_NUP93_chr16_56857619_length(transcript)=3552nt_BP=1591nt
CCCTCCTCGGCCGGAGGGAGGAGCCCGAGCCGCCGCCGCCGCCGCCGCCCGCCCGCCCGGCCCGGGAGGAGGACCGGACCCCGAGCGGCT
GGGAGCGCACGCGAGCGGGCCGTGGCCGCGCGGGCAGCGCCCTGAGCCTGTCCCGCGCCCGCGGGCCCGGCCGAGCAGGAGCAGCTCCCG
GGGATGCCCGGGCGGCTCGGAGCGCGGGCAGCGGCAGCCGTGCGGTGAGGGCGGTGGCGCCCGCGGGACCTGCGACTGCCAGGAACTCCT
GCCACCGCCACCGGCTCCCATGGCCCACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTGCGTGTG
CAAGGTGGAGCTGTCAGTGAGTGGCCAGAACCTACTGGACCGGGATGTTACCTCCAAGTCCGACCCCTTCTGTGTCCTCTTTACAGAGAA
CAATGGCAGATGGATCGAGTACGACAGGACAGAAACCGCGATCAACAACCTCAACCCCGCCTTCTCCAAGAAGTTCGTGCTTGACTACCA
CTTCGAGGAGGTACAGAAGCTCAAGTTCGCGCTCTTTGACCAGGACAAGTCCAGTATGCGGCTGGACGAGCATGACTTCCTGGGCCAGTT
CTCCTGCAGCCTGGGCACGATCGTCTCCAGCAAGAAGATCACTAGGCCTCTGCTGCTGCTGAATGACAAGCCTGCGGGGAAGGGCTTGAT
TACGATCGCTGCCCAGGAGCTGTCCGACAACCGCGTCATCACACTAAGCCTGGCGGGCAGGAGGCTGGACAAGAAGGACCTCTTTGGGAA
GTCAGACCCCTTTCTGGAGTTTTATAAGCCAGGAGACGATGGCAAGTGGATGCTGGTCCACAGGACTGAGGTGATCAAGTACACACTGGA
CCCTGTGTGGAAGCCATTCACAGTGCCCTTGGTGTCCCTGTGTGATGGGGACATGGAGAAGCCCATCCAGGTCATGTGCTACGACTATGA
CAATGACGGGGGCCATGACTTCATCGGCGAGTTCCAGACCTCAGTGTCACAGATGTGTGAGGCTCGAGACAGCGTCCCGCTGGAGTTCGA
GTGCATCAACCCCAAGAAGCAGAGGAAGAAGAAGAACTATAAAAACTCGGGCATCATCATCCTGCGATCCTGCAAGATAAACCGAGACTA
CTCCTTCCTTGACTACATCCTGGGAGGCTGCCAGCTCATGTTCACCGTTGGAATAGACTTTACAGCCTCCAACGGGAATCCCCTCGACCC
TTCCTCTTTGCACTATATCAACCCTATGGGCACCAACGAATATCTGTCGGCCATCTGGGCTGTTGGGCAGATCATTCAGGACTACGACAG
TGATAAGATGTTTCCAGCTCTGGGATTCGGGGCCCAGTTACCCCCAGACTGGAAGGTCTCCCATGAGTTTGCCATCAACTTCAACCCCAC
CAACCCCTTCTGCTCAGGTGTGGATGGTATTGCCCAGGCGTACTCAGCTTGCCTGCCCCACATCCGCTTCTACGGTCCTACCAATTTCTC
CCCCATCGTCAACCACGTGGCCCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGCCACGAGCATTTCCGACATGTGGACCATGGTAAA
ACAAATGACAGACGTGTTGTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGCGCATGGAGTTTGTCAGGCAGGC
CTTGGCGTACCTTGAGCAGAGTTATAAGAATTACACCCTTGTGACTGTCTTTGGAAATTTGCATCAGGCCCAGCTGGGCGGGGTGCCTGG
GACTTACCAATTGGTTCGAAGTTTCCTGAACATTAAACTGCCAGCTCCCTTGCCTGGACTACAGGATGGAGAGGTGGAAGGCCATCCTGT
GTGGGCGCTAATTTACTACTGCATGCGCTGTGGAGACCTGCTTGCCGCTTCACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAGTT
TAAAACCTGGTTCCAGGAGTACATGAACAGCAAGGACAGAAGATTGTCCCCAGCTACGGAAAACAAGCTCCGGCTGCATTACCGTAGGGC
CCTCAGGAACAATACAGATCCCTACAAGCGGGCCGTGTACTGTATCATTGGCAGATGTGACGTCACCGACAACCAGAGTGAAGTGGCGGA
CAAAACTGAGGATTACCTGTGGCTGAAGTTGAACCAAGTGTGTTTTGACGACGATGGCACCAGCTCCCCACAAGACAGGCTCACTCTCTC
ACAGTTCCAGAAGCAGTTGTTGGAAGACTATGGCGAGTCCCACTTTACGGTGAACCAGCAACCCTTCCTCTACTTCCAAGTCCTGTTCCT
GACAGCGCAGTTTGAAGCAGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCATGCTGTCCATGTAGCACTGGTGCTGTTTGA
GCTGAAGCTGCTTTTAAAGTCCTCTGGACAGAGTGCTCAGCTCCTCAGCCACGAGCCTGGTGACCCTCCTTGCTTGCGGCGGCTGAACTT
CGTGCGGCTCCTCATGCTGTACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGGCCCTCCAGTACTTCTATTTCCTCAGGGATGAGAA
AGATAGTCAAGGAGAAAACATGTTTCTGCGCTGTGTGAGTGAGCTTGTGATTGAAAGCCGAGAGTTCGATATGATTCTTGGGAAACTAGA
GAATGACGGAAGTAGAAAGCCTGGAGTCATAGATAAGTTTACTAGTGACACAAAGCCTATTATCAACAAAGTTGCTTCTGTGGCAGAAAA
TAAAGGACTGTTTGAAGAGGCAGCAAAGCTGTATGACCTTGCCAAGAATGCTGACAAGGTACTGGAGCTGATGAACAAACTGCTGAGCCC
TGTCGTCCCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGCACTCTCCATTGCCGAACGGTATAGGGCTCAAGG
AATAAGCGCAAATAAATTTGTGGACTCCACGTTCTATCTTCTTTTGGACTTGATCACCTTTTTTGACGAGTATCATAGTGGTCATATTGA
TAGAGCTTTTGATATCATTGAGCGCTTGAAGCTGGTGCCCCTGAATCAGGAAAGTGTGGAAGAGAGAGTGGCTGCCTTCAGAAATTTCAG
TGATGAAATCAGGCACAACCTCTCAGAAGTGCTTCTTGCCACCATGAACATCTTGTTCACACAGTTTAAGAGGCTCAAGGGGACAAGTCC
ATCCTCGTCATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACTCTCAACTCCGAAGTCAAGCCCGCACTCTGATTACCTTTGCTGGAAT
GATACCATACCGAACGTCTGGGGACACCAATGCGAGGCTGGTGCAGATGGAGGTCCTCATGAATTAAGTGCCATGCTTTGTGGGAGTCTG
GGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCACTAGGCTGGGGTTTCTGGTTTTGTTTCTGTTGTGTTTTGTTTTGGTTTCTGT

>In-frame_ENST00000290776_ENST00000564887_TCGA-BS-A0U9-01B_CPNE2_chr16_57171194_+_NUP93_chr16_56857619_length(amino acids)=1102AA_start in transcript=88_stop in transcript=3396
MGAHASGPWPRGQRPEPVPRPRARPSRSSSRGCPGGSERGQRQPCGEGGGARGTCDCQELLPPPPAPMAHIPSGGAPAAGAAPMGPQYCV
CKVELSVSGQNLLDRDVTSKSDPFCVLFTENNGRWIEYDRTETAINNLNPAFSKKFVLDYHFEEVQKLKFALFDQDKSSMRLDEHDFLGQ
FSCSLGTIVSSKKITRPLLLLNDKPAGKGLITIAAQELSDNRVITLSLAGRRLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTL
DPVWKPFTVPLVSLCDGDMEKPIQVMCYDYDNDGGHDFIGEFQTSVSQMCEARDSVPLEFECINPKKQRKKKNYKNSGIIILRSCKINRD
YSFLDYILGGCQLMFTVGIDFTASNGNPLDPSSLHYINPMGTNEYLSAIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNP
TNPFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVNHVARFAAQATQQRTATSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQ
ALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGE
FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTL
SQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLN
FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAE
NKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
DRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTSPSSSSRPQRVIEDRDSQLRSQARTLITFAG

--------------------------------------------------------------
>In-frame_ENST00000537605_ENST00000308159_TCGA-BS-A0U9-01B_CPNE2_chr16_57171194_+_NUP93_chr16_56857619_length(transcript)=3500nt_BP=1534nt
CGGCCCGGGAGGAGGACCGGACCCCGAGCGGCTGGGAGCGCACGCGAGCGGGCCGTGGCCGCGCGGGCAGCGCCCTGAGCCTGTCCCGCG
CCCGCGGGCCCGGCCGAGCAGGAGCAGCTCCCGGGGATGCCCGGGCGGCTCGGAGCGCGGGCAGCGGCAGCCGTGCGGTGAGGGCGGTGG
CGCCCGCGGGACCTGCGACTGCCAGGAACTCCTGCCACCGCCACCGGCTCCCATGGCCCACATACCCAGTGGGGGTGCCCCAGCAGCGGG
GGCAGCCCCCATGGGCCCCCAGTATTGCGTGTGCAAGGTGGAGCTGTCAGTGAGTGGCCAGAACCTACTGGACCGGGATGTTACCTCCAA
GTCCGACCCCTTCTGTGTCCTCTTTACAGAGAACAATGGCAGATGGATCGAGTACGACAGGACAGAAACCGCGATCAACAACCTCAACCC
CGCCTTCTCCAAGAAGTTCGTGCTTGACTACCACTTCGAGGAGGTACAGAAGCTCAAGTTCGCGCTCTTTGACCAGGACAAGTCCAGTAT
GCGGCTGGACGAGCATGACTTCCTGGGCCAGTTCTCCTGCAGCCTGGGCACGATCGTCTCCAGCAAGAAGATCACTAGGCCTCTGCTGCT
GCTGAATGACAAGCCTGCGGGGAAGGGCTTGATTACGATCGCTGCCCAGGAGCTGTCCGACAACCGCGTCATCACACTAAGCCTGGCGGG
CAGGAGGCTGGACAAGAAGGACCTCTTTGGGAAGTCAGACCCCTTTCTGGAGTTTTATAAGCCAGGAGACGATGGCAAGTGGATGCTGGT
CCACAGGACTGAGGTGATCAAGTACACACTGGACCCTGTGTGGAAGCCATTCACAGTGCCCTTGGTGTCCCTGTGTGATGGGGACATGGA
GAAGCCCATCCAGGTCATGTGCTACGACTATGACAATGACGGGGGCCATGACTTCATCGGCGAGTTCCAGACCTCAGTGTCACAGATGTG
TGAGGCTCGAGACAGCGTCCCGCTGGAGTTCGAGTGCATCAACCCCAAGAAGCAGAGGAAGAAGAAGAACTATAAAAACTCGGGCATCAT
CATCCTGCGATCCTGCAAGATAAACCGAGACTACTCCTTCCTTGACTACATCCTGGGAGGCTGCCAGCTCATGTTCACCGTTGGAATAGA
CTTTACAGCCTCCAACGGGAATCCCCTCGACCCTTCCTCTTTGCACTATATCAACCCTATGGGCACCAACGAATATCTGTCGGCCATCTG
GGCTGTTGGGCAGATCATTCAGGACTACGACAGTGATAAGATGTTTCCAGCTCTGGGATTCGGGGCCCAGTTACCCCCAGACTGGAAGGT
CTCCCATGAGTTTGCCATCAACTTCAACCCCACCAACCCCTTCTGCTCAGGTGTGGATGGTATTGCCCAGGCGTACTCAGCTTGCCTGCC
CCACATCCGCTTCTACGGTCCTACCAATTTCTCCCCCATCGTCAACCACGTGGCCCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGC
CACGAGCATTTCCGACATGTGGACCATGGTAAAACAAATGACAGACGTGTTGTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAG
CGTGGAAGTGCGCATGGAGTTTGTCAGGCAGGCCTTGGCGTACCTTGAGCAGAGTTATAAGAATTACACCCTTGTGACTGTCTTTGGAAA
TTTGCATCAGGCCCAGCTGGGCGGGGTGCCTGGGACTTACCAATTGGTTCGAAGTTTCCTGAACATTAAACTGCCAGCTCCCTTGCCTGG
ACTACAGGATGGAGAGGTGGAAGGCCATCCTGTGTGGGCGCTAATTTACTACTGCATGCGCTGTGGAGACCTGCTTGCCGCTTCACAGGT
AGTTAATCGAGCCCAGCACCAGCTGGGAGAGTTTAAAACCTGGTTCCAGGAGTACATGAACAGCAAGGACAGAAGATTGTCCCCAGCTAC
GGAAAACAAGCTCCGGCTGCATTACCGTAGGGCCCTCAGGAACAATACAGATCCCTACAAGCGGGCCGTGTACTGTATCATTGGCAGATG
TGACGTCACCGACAACCAGAGTGAAGTGGCGGACAAAACTGAGGATTACCTGTGGCTGAAGTTGAACCAAGTGTGTTTTGACGACGATGG
CACCAGCTCCCCACAAGACAGGCTCACTCTCTCACAGTTCCAGAAGCAGTTGTTGGAAGACTATGGCGAGTCCCACTTTACGGTGAACCA
GCAACCCTTCCTCTACTTCCAAGTCCTGTTCCTGACAGCGCAGTTTGAAGCAGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTG
CCATGCTGTCCATGTAGCACTGGTGCTGTTTGAGCTGAAGCTGCTTTTAAAGTCCTCTGGACAGAGTGCTCAGCTCCTCAGCCACGAGCC
TGGTGACCCTCCTTGCTTGCGGCGGCTGAACTTCGTGCGGCTCCTCATGCTGTACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGGC
CCTCCAGTACTTCTATTTCCTCAGGGATGAGAAAGATAGTCAAGGAGAAAACATGTTTCTGCGCTGTGTGAGTGAGCTTGTGATTGAAAG
CCGAGAGTTCGATATGATTCTTGGGAAACTAGAGAATGACGGAAGTAGAAAGCCTGGAGTCATAGATAAGTTTACTAGTGACACAAAGCC
TATTATCAACAAAGTTGCTTCTGTGGCAGAAAATAAAGGACTGTTTGAAGAGGCAGCAAAGCTGTATGACCTTGCCAAGAATGCTGACAA
GGTACTGGAGCTGATGAACAAACTGCTGAGCCCTGTCGTCCCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGC
ACTCTCCATTGCCGAACGGTATAGGGCTCAAGGAATAAGCGCAAATAAATTTGTGGACTCCACGTTCTATCTTCTTTTGGACTTGATCAC
CTTTTTTGACGAGTATCATAGTGGTCATATTGATAGAGCTTTTGATATCATTGAGCGCTTGAAGCTGGTGCCCCTGAATCAGGAAAGTGT
GGAAGAGAGAGTGGCTGCCTTCAGAAATTTCAGTGATGAAATCAGGCACAACCTCTCAGAAGTGCTTCTTGCCACCATGAACATCTTGTT
CACACAGTTTAAGAGGCTCAAGGGGACAAGTCCATCCTCGTCATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACTCTCAACTCCGAAG
TCAAGCCCGCACTCTGATTACCTTTGCTGGAATGATACCATACCGAACGTCTGGGGACACCAATGCGAGGCTGGTGCAGATGGAGGTCCT
CATGAATTAAGTGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCACTAGGCTGGGGTTTCTGGT

>In-frame_ENST00000537605_ENST00000308159_TCGA-BS-A0U9-01B_CPNE2_chr16_57171194_+_NUP93_chr16_56857619_length(amino acids)=1102AA_start in transcript=31_stop in transcript=3339
MGAHASGPWPRGQRPEPVPRPRARPSRSSSRGCPGGSERGQRQPCGEGGGARGTCDCQELLPPPPAPMAHIPSGGAPAAGAAPMGPQYCV
CKVELSVSGQNLLDRDVTSKSDPFCVLFTENNGRWIEYDRTETAINNLNPAFSKKFVLDYHFEEVQKLKFALFDQDKSSMRLDEHDFLGQ
FSCSLGTIVSSKKITRPLLLLNDKPAGKGLITIAAQELSDNRVITLSLAGRRLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTL
DPVWKPFTVPLVSLCDGDMEKPIQVMCYDYDNDGGHDFIGEFQTSVSQMCEARDSVPLEFECINPKKQRKKKNYKNSGIIILRSCKINRD
YSFLDYILGGCQLMFTVGIDFTASNGNPLDPSSLHYINPMGTNEYLSAIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNP
TNPFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVNHVARFAAQATQQRTATSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQ
ALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGE
FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTL
SQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLN
FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAE
NKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
DRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTSPSSSSRPQRVIEDRDSQLRSQARTLITFAG

--------------------------------------------------------------
>In-frame_ENST00000537605_ENST00000569842_TCGA-BS-A0U9-01B_CPNE2_chr16_57171194_+_NUP93_chr16_56857619_length(transcript)=3618nt_BP=1534nt
CGGCCCGGGAGGAGGACCGGACCCCGAGCGGCTGGGAGCGCACGCGAGCGGGCCGTGGCCGCGCGGGCAGCGCCCTGAGCCTGTCCCGCG
CCCGCGGGCCCGGCCGAGCAGGAGCAGCTCCCGGGGATGCCCGGGCGGCTCGGAGCGCGGGCAGCGGCAGCCGTGCGGTGAGGGCGGTGG
CGCCCGCGGGACCTGCGACTGCCAGGAACTCCTGCCACCGCCACCGGCTCCCATGGCCCACATACCCAGTGGGGGTGCCCCAGCAGCGGG
GGCAGCCCCCATGGGCCCCCAGTATTGCGTGTGCAAGGTGGAGCTGTCAGTGAGTGGCCAGAACCTACTGGACCGGGATGTTACCTCCAA
GTCCGACCCCTTCTGTGTCCTCTTTACAGAGAACAATGGCAGATGGATCGAGTACGACAGGACAGAAACCGCGATCAACAACCTCAACCC
CGCCTTCTCCAAGAAGTTCGTGCTTGACTACCACTTCGAGGAGGTACAGAAGCTCAAGTTCGCGCTCTTTGACCAGGACAAGTCCAGTAT
GCGGCTGGACGAGCATGACTTCCTGGGCCAGTTCTCCTGCAGCCTGGGCACGATCGTCTCCAGCAAGAAGATCACTAGGCCTCTGCTGCT
GCTGAATGACAAGCCTGCGGGGAAGGGCTTGATTACGATCGCTGCCCAGGAGCTGTCCGACAACCGCGTCATCACACTAAGCCTGGCGGG
CAGGAGGCTGGACAAGAAGGACCTCTTTGGGAAGTCAGACCCCTTTCTGGAGTTTTATAAGCCAGGAGACGATGGCAAGTGGATGCTGGT
CCACAGGACTGAGGTGATCAAGTACACACTGGACCCTGTGTGGAAGCCATTCACAGTGCCCTTGGTGTCCCTGTGTGATGGGGACATGGA
GAAGCCCATCCAGGTCATGTGCTACGACTATGACAATGACGGGGGCCATGACTTCATCGGCGAGTTCCAGACCTCAGTGTCACAGATGTG
TGAGGCTCGAGACAGCGTCCCGCTGGAGTTCGAGTGCATCAACCCCAAGAAGCAGAGGAAGAAGAAGAACTATAAAAACTCGGGCATCAT
CATCCTGCGATCCTGCAAGATAAACCGAGACTACTCCTTCCTTGACTACATCCTGGGAGGCTGCCAGCTCATGTTCACCGTTGGAATAGA
CTTTACAGCCTCCAACGGGAATCCCCTCGACCCTTCCTCTTTGCACTATATCAACCCTATGGGCACCAACGAATATCTGTCGGCCATCTG
GGCTGTTGGGCAGATCATTCAGGACTACGACAGTGATAAGATGTTTCCAGCTCTGGGATTCGGGGCCCAGTTACCCCCAGACTGGAAGGT
CTCCCATGAGTTTGCCATCAACTTCAACCCCACCAACCCCTTCTGCTCAGGTGTGGATGGTATTGCCCAGGCGTACTCAGCTTGCCTGCC
CCACATCCGCTTCTACGGTCCTACCAATTTCTCCCCCATCGTCAACCACGTGGCCCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGC
CACGAGCATTTCCGACATGTGGACCATGGTAAAACAAATGACAGACGTGTTGTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAG
CGTGGAAGTGCGCATGGAGTTTGTCAGGCAGGCCTTGGCGTACCTTGAGCAGAGTTATAAGAATTACACCCTTGTGACTGTCTTTGGAAA
TTTGCATCAGGCCCAGCTGGGCGGGGTGCCTGGGACTTACCAATTGGTTCGAAGTTTCCTGAACATTAAACTGCCAGCTCCCTTGCCTGG
ACTACAGGATGGAGAGGTGGAAGGCCATCCTGTGTGGGCGCTAATTTACTACTGCATGCGCTGTGGAGACCTGCTTGCCGCTTCACAGGT
AGTTAATCGAGCCCAGCACCAGCTGGGAGAGTTTAAAACCTGGTTCCAGGAGTACATGAACAGCAAGGACAGAAGATTGTCCCCAGCTAC
GGAAAACAAGCTCCGGCTGCATTACCGTAGGGCCCTCAGGAACAATACAGATCCCTACAAGCGGGCCGTGTACTGTATCATTGGCAGATG
TGACGTCACCGACAACCAGAGTGAAGTGGCGGACAAAACTGAGGATTACCTGTGGCTGAAGTTGAACCAAGTGTGTTTTGACGACGATGG
CACCAGCTCCCCACAAGACAGGCTCACTCTCTCACAGTTCCAGAAGCAGTTGTTGGAAGACTATGGCGAGTCCCACTTTACGGTGAACCA
GCAACCCTTCCTCTACTTCCAAGTCCTGTTCCTGACAGCGCAGTTTGAAGCAGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTG
CCATGCTGTCCATGTAGCACTGGTGCTGTTTGAGCTGAAGCTGCTTTTAAAGTCCTCTGGACAGAGTGCTCAGCTCCTCAGCCACGAGCC
TGGTGACCCTCCTTGCTTGCGGCGGCTGAACTTCGTGCGGCTCCTCATGCTGTACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGGC
CCTCCAGTACTTCTATTTCCTCAGGGATGAGAAAGATAGTCAAGGAGAAAACATGTTTCTGCGCTGTGTGAGTGAGCTTGTGATTGAAAG
CCGAGAGTTCGATATGATTCTTGGGAAACTAGAGAATGACGGAAGTAGAAAGCCTGGAGTCATAGATAAGTTTACTAGTGACACAAAGCC
TATTATCAACAAAGTTGCTTCTGTGGCAGAAAATAAAGGACTGTTTGAAGAGGCAGCAAAGCTGTATGACCTTGCCAAGAATGCTGACAA
GGTACTGGAGCTGATGAACAAACTGCTGAGCCCTGTCGTCCCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGC
ACTCTCCATTGCCGAACGGTATAGGGCTCAAGGAATAAGCGCAAATAAATTTGTGGACTCCACGTTCTATCTTCTTTTGGACTTGATCAC
CTTTTTTGACGAGTATCATAGTGGTCATATTGATAGAGCTTTTGATATCATTGAGCGCTTGAAGCTGGTGCCCCTGAATCAGGAAAGTGT
GGAAGAGAGAGTGGCTGCCTTCAGAAATTTCAGTGATGAAATCAGGCACAACCTCTCAGAAGTGCTTCTTGCCACCATGAACATCTTGTT
CACACAGTTTAAGAGGCTCAAGGGGACAAGTCCATCCTCGTCATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACTCTGGCCTGGCTCT
GTTGCCCAGGCTGGAATGCAATGACACGATCTCAGCTCACTGCAACCTCTACCTCTTGGGCTCAAGCCACCCTCCCACCTCACCCTCCCA
AGTAGCTGGGACTACAGCAACTCCGAAGTCAAGCCCGCACTCTGATTACCTTTGCTGGAATGATACCATACCGAACGTCTGGGGACACCA
ATGCGAGGCTGGTGCAGATGGAGGTCCTCATGAATTAAGTGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCAC
ATGGGCCCACTAGGCTGGGGTTTCTGGTTTTGTTTCTGTTGTGTTTTGTTTTGGTTTCTGTATTATGTATTTTTGTCAACGCCAATAAAT

>In-frame_ENST00000537605_ENST00000569842_TCGA-BS-A0U9-01B_CPNE2_chr16_57171194_+_NUP93_chr16_56857619_length(amino acids)=1163AA_start in transcript=31_stop in transcript=3522
MGAHASGPWPRGQRPEPVPRPRARPSRSSSRGCPGGSERGQRQPCGEGGGARGTCDCQELLPPPPAPMAHIPSGGAPAAGAAPMGPQYCV
CKVELSVSGQNLLDRDVTSKSDPFCVLFTENNGRWIEYDRTETAINNLNPAFSKKFVLDYHFEEVQKLKFALFDQDKSSMRLDEHDFLGQ
FSCSLGTIVSSKKITRPLLLLNDKPAGKGLITIAAQELSDNRVITLSLAGRRLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTL
DPVWKPFTVPLVSLCDGDMEKPIQVMCYDYDNDGGHDFIGEFQTSVSQMCEARDSVPLEFECINPKKQRKKKNYKNSGIIILRSCKINRD
YSFLDYILGGCQLMFTVGIDFTASNGNPLDPSSLHYINPMGTNEYLSAIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNP
TNPFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVNHVARFAAQATQQRTATSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQ
ALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGE
FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTL
SQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLN
FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAE
NKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
DRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTSPSSSSRPQRVIEDRDSGLALLPRLECNDTI

--------------------------------------------------------------
>In-frame_ENST00000537605_ENST00000564887_TCGA-BS-A0U9-01B_CPNE2_chr16_57171194_+_NUP93_chr16_56857619_length(transcript)=3495nt_BP=1534nt
CGGCCCGGGAGGAGGACCGGACCCCGAGCGGCTGGGAGCGCACGCGAGCGGGCCGTGGCCGCGCGGGCAGCGCCCTGAGCCTGTCCCGCG
CCCGCGGGCCCGGCCGAGCAGGAGCAGCTCCCGGGGATGCCCGGGCGGCTCGGAGCGCGGGCAGCGGCAGCCGTGCGGTGAGGGCGGTGG
CGCCCGCGGGACCTGCGACTGCCAGGAACTCCTGCCACCGCCACCGGCTCCCATGGCCCACATACCCAGTGGGGGTGCCCCAGCAGCGGG
GGCAGCCCCCATGGGCCCCCAGTATTGCGTGTGCAAGGTGGAGCTGTCAGTGAGTGGCCAGAACCTACTGGACCGGGATGTTACCTCCAA
GTCCGACCCCTTCTGTGTCCTCTTTACAGAGAACAATGGCAGATGGATCGAGTACGACAGGACAGAAACCGCGATCAACAACCTCAACCC
CGCCTTCTCCAAGAAGTTCGTGCTTGACTACCACTTCGAGGAGGTACAGAAGCTCAAGTTCGCGCTCTTTGACCAGGACAAGTCCAGTAT
GCGGCTGGACGAGCATGACTTCCTGGGCCAGTTCTCCTGCAGCCTGGGCACGATCGTCTCCAGCAAGAAGATCACTAGGCCTCTGCTGCT
GCTGAATGACAAGCCTGCGGGGAAGGGCTTGATTACGATCGCTGCCCAGGAGCTGTCCGACAACCGCGTCATCACACTAAGCCTGGCGGG
CAGGAGGCTGGACAAGAAGGACCTCTTTGGGAAGTCAGACCCCTTTCTGGAGTTTTATAAGCCAGGAGACGATGGCAAGTGGATGCTGGT
CCACAGGACTGAGGTGATCAAGTACACACTGGACCCTGTGTGGAAGCCATTCACAGTGCCCTTGGTGTCCCTGTGTGATGGGGACATGGA
GAAGCCCATCCAGGTCATGTGCTACGACTATGACAATGACGGGGGCCATGACTTCATCGGCGAGTTCCAGACCTCAGTGTCACAGATGTG
TGAGGCTCGAGACAGCGTCCCGCTGGAGTTCGAGTGCATCAACCCCAAGAAGCAGAGGAAGAAGAAGAACTATAAAAACTCGGGCATCAT
CATCCTGCGATCCTGCAAGATAAACCGAGACTACTCCTTCCTTGACTACATCCTGGGAGGCTGCCAGCTCATGTTCACCGTTGGAATAGA
CTTTACAGCCTCCAACGGGAATCCCCTCGACCCTTCCTCTTTGCACTATATCAACCCTATGGGCACCAACGAATATCTGTCGGCCATCTG
GGCTGTTGGGCAGATCATTCAGGACTACGACAGTGATAAGATGTTTCCAGCTCTGGGATTCGGGGCCCAGTTACCCCCAGACTGGAAGGT
CTCCCATGAGTTTGCCATCAACTTCAACCCCACCAACCCCTTCTGCTCAGGTGTGGATGGTATTGCCCAGGCGTACTCAGCTTGCCTGCC
CCACATCCGCTTCTACGGTCCTACCAATTTCTCCCCCATCGTCAACCACGTGGCCCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGC
CACGAGCATTTCCGACATGTGGACCATGGTAAAACAAATGACAGACGTGTTGTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAG
CGTGGAAGTGCGCATGGAGTTTGTCAGGCAGGCCTTGGCGTACCTTGAGCAGAGTTATAAGAATTACACCCTTGTGACTGTCTTTGGAAA
TTTGCATCAGGCCCAGCTGGGCGGGGTGCCTGGGACTTACCAATTGGTTCGAAGTTTCCTGAACATTAAACTGCCAGCTCCCTTGCCTGG
ACTACAGGATGGAGAGGTGGAAGGCCATCCTGTGTGGGCGCTAATTTACTACTGCATGCGCTGTGGAGACCTGCTTGCCGCTTCACAGGT
AGTTAATCGAGCCCAGCACCAGCTGGGAGAGTTTAAAACCTGGTTCCAGGAGTACATGAACAGCAAGGACAGAAGATTGTCCCCAGCTAC
GGAAAACAAGCTCCGGCTGCATTACCGTAGGGCCCTCAGGAACAATACAGATCCCTACAAGCGGGCCGTGTACTGTATCATTGGCAGATG
TGACGTCACCGACAACCAGAGTGAAGTGGCGGACAAAACTGAGGATTACCTGTGGCTGAAGTTGAACCAAGTGTGTTTTGACGACGATGG
CACCAGCTCCCCACAAGACAGGCTCACTCTCTCACAGTTCCAGAAGCAGTTGTTGGAAGACTATGGCGAGTCCCACTTTACGGTGAACCA
GCAACCCTTCCTCTACTTCCAAGTCCTGTTCCTGACAGCGCAGTTTGAAGCAGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTG
CCATGCTGTCCATGTAGCACTGGTGCTGTTTGAGCTGAAGCTGCTTTTAAAGTCCTCTGGACAGAGTGCTCAGCTCCTCAGCCACGAGCC
TGGTGACCCTCCTTGCTTGCGGCGGCTGAACTTCGTGCGGCTCCTCATGCTGTACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGGC
CCTCCAGTACTTCTATTTCCTCAGGGATGAGAAAGATAGTCAAGGAGAAAACATGTTTCTGCGCTGTGTGAGTGAGCTTGTGATTGAAAG
CCGAGAGTTCGATATGATTCTTGGGAAACTAGAGAATGACGGAAGTAGAAAGCCTGGAGTCATAGATAAGTTTACTAGTGACACAAAGCC
TATTATCAACAAAGTTGCTTCTGTGGCAGAAAATAAAGGACTGTTTGAAGAGGCAGCAAAGCTGTATGACCTTGCCAAGAATGCTGACAA
GGTACTGGAGCTGATGAACAAACTGCTGAGCCCTGTCGTCCCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGC
ACTCTCCATTGCCGAACGGTATAGGGCTCAAGGAATAAGCGCAAATAAATTTGTGGACTCCACGTTCTATCTTCTTTTGGACTTGATCAC
CTTTTTTGACGAGTATCATAGTGGTCATATTGATAGAGCTTTTGATATCATTGAGCGCTTGAAGCTGGTGCCCCTGAATCAGGAAAGTGT
GGAAGAGAGAGTGGCTGCCTTCAGAAATTTCAGTGATGAAATCAGGCACAACCTCTCAGAAGTGCTTCTTGCCACCATGAACATCTTGTT
CACACAGTTTAAGAGGCTCAAGGGGACAAGTCCATCCTCGTCATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACTCTCAACTCCGAAG
TCAAGCCCGCACTCTGATTACCTTTGCTGGAATGATACCATACCGAACGTCTGGGGACACCAATGCGAGGCTGGTGCAGATGGAGGTCCT
CATGAATTAAGTGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCACTAGGCTGGGGTTTCTGGT

>In-frame_ENST00000537605_ENST00000564887_TCGA-BS-A0U9-01B_CPNE2_chr16_57171194_+_NUP93_chr16_56857619_length(amino acids)=1102AA_start in transcript=31_stop in transcript=3339
MGAHASGPWPRGQRPEPVPRPRARPSRSSSRGCPGGSERGQRQPCGEGGGARGTCDCQELLPPPPAPMAHIPSGGAPAAGAAPMGPQYCV
CKVELSVSGQNLLDRDVTSKSDPFCVLFTENNGRWIEYDRTETAINNLNPAFSKKFVLDYHFEEVQKLKFALFDQDKSSMRLDEHDFLGQ
FSCSLGTIVSSKKITRPLLLLNDKPAGKGLITIAAQELSDNRVITLSLAGRRLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTL
DPVWKPFTVPLVSLCDGDMEKPIQVMCYDYDNDGGHDFIGEFQTSVSQMCEARDSVPLEFECINPKKQRKKKNYKNSGIIILRSCKINRD
YSFLDYILGGCQLMFTVGIDFTASNGNPLDPSSLHYINPMGTNEYLSAIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNP
TNPFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVNHVARFAAQATQQRTATSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQ
ALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGE
FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTL
SQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLN
FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAE
NKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
DRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTSPSSSSRPQRVIEDRDSQLRSQARTLITFAG

--------------------------------------------------------------
>In-frame_ENST00000535318_ENST00000308159_TCGA-BS-A0U9-01B_CPNE2_chr16_57171194_+_NUP93_chr16_56857619_length(transcript)=3629nt_BP=1663nt
GGACCGGACCCCGAGCGGCTGGGAGCGCACGCGAGCGGGCCGTGGCCGCGCGGGCAGCGCCCTGAGCCTGTCCCGCGCCCGCGGGCCCGG
CCGAGCAGGAGCAGCTCCCGGGGATGCCCGGGCGGCTCGGAGCGCGGGCAGCGGCAGCCGTGCGGTGAGGGCGGTGGCGCCCGCGGGACC
TGCGGGAACTTGGCCCAGACCCTCCCCCCCTGTGGCCCTCTGGGTCACCATCTGTGAAATGGGCTGATGTTCCGGGGCCTGCCTCCTGGA
GAATGGACACAGCATGAAGGCGTGGTTTTATGGCATTCCGCCTGGCATAGGTCCAGACTGCCAGGAACTCCTGCCACCGCCACCGGCTCC
CATGGCCCACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTGCGTGTGCAAGGTGGAGCTGTCAGT
GAGTGGCCAGAACCTACTGGACCGGGATGTTACCTCCAAGTCCGACCCCTTCTGTGTCCTCTTTACAGAGAACAATGGCAGATGGATCGA
GTACGACAGGACAGAAACCGCGATCAACAACCTCAACCCCGCCTTCTCCAAGAAGTTCGTGCTTGACTACCACTTCGAGGAGGTACAGAA
GCTCAAGTTCGCGCTCTTTGACCAGGACAAGTCCAGTATGCGGCTGGACGAGCATGACTTCCTGGGCCAGTTCTCCTGCAGCCTGGGCAC
GATCGTCTCCAGCAAGAAGATCACTAGGCCTCTGCTGCTGCTGAATGACAAGCCTGCGGGGAAGGGCTTGATTACGATCGCTGCCCAGGA
GCTGTCCGACAACCGCGTCATCACACTAAGCCTGGCGGGCAGGAGGCTGGACAAGAAGGACCTCTTTGGGAAGTCAGACCCCTTTCTGGA
GTTTTATAAGCCAGGAGACGATGGCAAGTGGATGCTGGTCCACAGGACTGAGGTGATCAAGTACACACTGGACCCTGTGTGGAAGCCATT
CACAGTGCCCTTGGTGTCCCTGTGTGATGGGGACATGGAGAAGCCCATCCAGGTCATGTGCTACGACTATGACAATGACGGGGGCCATGA
CTTCATCGGCGAGTTCCAGACCTCAGTGTCACAGATGTGTGAGGCTCGAGACAGCGTCCCGCTGGAGTTCGAGTGCATCAACCCCAAGAA
GCAGAGGAAGAAGAAGAACTATAAAAACTCGGGCATCATCATCCTGCGATCCTGCAAGATAAACCGAGACTACTCCTTCCTTGACTACAT
CCTGGGAGGCTGCCAGCTCATGTTCACCGTTGGAATAGACTTTACAGCCTCCAACGGGAATCCCCTCGACCCTTCCTCTTTGCACTATAT
CAACCCTATGGGCACCAACGAATATCTGTCGGCCATCTGGGCTGTTGGGCAGATCATTCAGGACTACGACAGTGATAAGATGTTTCCAGC
TCTGGGATTCGGGGCCCAGTTACCCCCAGACTGGAAGGTCTCCCATGAGTTTGCCATCAACTTCAACCCCACCAACCCCTTCTGCTCAGG
TGTGGATGGTATTGCCCAGGCGTACTCAGCTTGCCTGCCCCACATCCGCTTCTACGGTCCTACCAATTTCTCCCCCATCGTCAACCACGT
GGCCCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGCCACGAGCATTTCCGACATGTGGACCATGGTAAAACAAATGACAGACGTGTT
GTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGCGCATGGAGTTTGTCAGGCAGGCCTTGGCGTACCTTGAGCA
GAGTTATAAGAATTACACCCTTGTGACTGTCTTTGGAAATTTGCATCAGGCCCAGCTGGGCGGGGTGCCTGGGACTTACCAATTGGTTCG
AAGTTTCCTGAACATTAAACTGCCAGCTCCCTTGCCTGGACTACAGGATGGAGAGGTGGAAGGCCATCCTGTGTGGGCGCTAATTTACTA
CTGCATGCGCTGTGGAGACCTGCTTGCCGCTTCACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAGTTTAAAACCTGGTTCCAGGA
GTACATGAACAGCAAGGACAGAAGATTGTCCCCAGCTACGGAAAACAAGCTCCGGCTGCATTACCGTAGGGCCCTCAGGAACAATACAGA
TCCCTACAAGCGGGCCGTGTACTGTATCATTGGCAGATGTGACGTCACCGACAACCAGAGTGAAGTGGCGGACAAAACTGAGGATTACCT
GTGGCTGAAGTTGAACCAAGTGTGTTTTGACGACGATGGCACCAGCTCCCCACAAGACAGGCTCACTCTCTCACAGTTCCAGAAGCAGTT
GTTGGAAGACTATGGCGAGTCCCACTTTACGGTGAACCAGCAACCCTTCCTCTACTTCCAAGTCCTGTTCCTGACAGCGCAGTTTGAAGC
AGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCATGCTGTCCATGTAGCACTGGTGCTGTTTGAGCTGAAGCTGCTTTTAAA
GTCCTCTGGACAGAGTGCTCAGCTCCTCAGCCACGAGCCTGGTGACCCTCCTTGCTTGCGGCGGCTGAACTTCGTGCGGCTCCTCATGCT
GTACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGGCCCTCCAGTACTTCTATTTCCTCAGGGATGAGAAAGATAGTCAAGGAGAAAA
CATGTTTCTGCGCTGTGTGAGTGAGCTTGTGATTGAAAGCCGAGAGTTCGATATGATTCTTGGGAAACTAGAGAATGACGGAAGTAGAAA
GCCTGGAGTCATAGATAAGTTTACTAGTGACACAAAGCCTATTATCAACAAAGTTGCTTCTGTGGCAGAAAATAAAGGACTGTTTGAAGA
GGCAGCAAAGCTGTATGACCTTGCCAAGAATGCTGACAAGGTACTGGAGCTGATGAACAAACTGCTGAGCCCTGTCGTCCCCCAGATCAG
TGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGCACTCTCCATTGCCGAACGGTATAGGGCTCAAGGAATAAGCGCAAATAAATT
TGTGGACTCCACGTTCTATCTTCTTTTGGACTTGATCACCTTTTTTGACGAGTATCATAGTGGTCATATTGATAGAGCTTTTGATATCAT
TGAGCGCTTGAAGCTGGTGCCCCTGAATCAGGAAAGTGTGGAAGAGAGAGTGGCTGCCTTCAGAAATTTCAGTGATGAAATCAGGCACAA
CCTCTCAGAAGTGCTTCTTGCCACCATGAACATCTTGTTCACACAGTTTAAGAGGCTCAAGGGGACAAGTCCATCCTCGTCATCCAGGCC
CCAGCGAGTCATCGAGGACCGCGACTCTCAACTCCGAAGTCAAGCCCGCACTCTGATTACCTTTGCTGGAATGATACCATACCGAACGTC
TGGGGACACCAATGCGAGGCTGGTGCAGATGGAGGTCCTCATGAATTAAGTGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGT
ACATCAGGCACATGGGCCCACTAGGCTGGGGTTTCTGGTTTTGTTTCTGTTGTGTTTTGTTTTGGTTTCTGTATTATGTATTTTTGTCAA

>In-frame_ENST00000535318_ENST00000308159_TCGA-BS-A0U9-01B_CPNE2_chr16_57171194_+_NUP93_chr16_56857619_length(amino acids)=1067AA_start in transcript=265_stop in transcript=3468
MENGHSMKAWFYGIPPGIGPDCQELLPPPPAPMAHIPSGGAPAAGAAPMGPQYCVCKVELSVSGQNLLDRDVTSKSDPFCVLFTENNGRW
IEYDRTETAINNLNPAFSKKFVLDYHFEEVQKLKFALFDQDKSSMRLDEHDFLGQFSCSLGTIVSSKKITRPLLLLNDKPAGKGLITIAA
QELSDNRVITLSLAGRRLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTLDPVWKPFTVPLVSLCDGDMEKPIQVMCYDYDNDGG
HDFIGEFQTSVSQMCEARDSVPLEFECINPKKQRKKKNYKNSGIIILRSCKINRDYSFLDYILGGCQLMFTVGIDFTASNGNPLDPSSLH
YINPMGTNEYLSAIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNPTNPFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVN
HVARFAAQATQQRTATSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQL
VRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNN
TDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQF
EAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQG
ENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQ
ISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIR

--------------------------------------------------------------
>In-frame_ENST00000535318_ENST00000569842_TCGA-BS-A0U9-01B_CPNE2_chr16_57171194_+_NUP93_chr16_56857619_length(transcript)=3747nt_BP=1663nt
GGACCGGACCCCGAGCGGCTGGGAGCGCACGCGAGCGGGCCGTGGCCGCGCGGGCAGCGCCCTGAGCCTGTCCCGCGCCCGCGGGCCCGG
CCGAGCAGGAGCAGCTCCCGGGGATGCCCGGGCGGCTCGGAGCGCGGGCAGCGGCAGCCGTGCGGTGAGGGCGGTGGCGCCCGCGGGACC
TGCGGGAACTTGGCCCAGACCCTCCCCCCCTGTGGCCCTCTGGGTCACCATCTGTGAAATGGGCTGATGTTCCGGGGCCTGCCTCCTGGA
GAATGGACACAGCATGAAGGCGTGGTTTTATGGCATTCCGCCTGGCATAGGTCCAGACTGCCAGGAACTCCTGCCACCGCCACCGGCTCC
CATGGCCCACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTGCGTGTGCAAGGTGGAGCTGTCAGT
GAGTGGCCAGAACCTACTGGACCGGGATGTTACCTCCAAGTCCGACCCCTTCTGTGTCCTCTTTACAGAGAACAATGGCAGATGGATCGA
GTACGACAGGACAGAAACCGCGATCAACAACCTCAACCCCGCCTTCTCCAAGAAGTTCGTGCTTGACTACCACTTCGAGGAGGTACAGAA
GCTCAAGTTCGCGCTCTTTGACCAGGACAAGTCCAGTATGCGGCTGGACGAGCATGACTTCCTGGGCCAGTTCTCCTGCAGCCTGGGCAC
GATCGTCTCCAGCAAGAAGATCACTAGGCCTCTGCTGCTGCTGAATGACAAGCCTGCGGGGAAGGGCTTGATTACGATCGCTGCCCAGGA
GCTGTCCGACAACCGCGTCATCACACTAAGCCTGGCGGGCAGGAGGCTGGACAAGAAGGACCTCTTTGGGAAGTCAGACCCCTTTCTGGA
GTTTTATAAGCCAGGAGACGATGGCAAGTGGATGCTGGTCCACAGGACTGAGGTGATCAAGTACACACTGGACCCTGTGTGGAAGCCATT
CACAGTGCCCTTGGTGTCCCTGTGTGATGGGGACATGGAGAAGCCCATCCAGGTCATGTGCTACGACTATGACAATGACGGGGGCCATGA
CTTCATCGGCGAGTTCCAGACCTCAGTGTCACAGATGTGTGAGGCTCGAGACAGCGTCCCGCTGGAGTTCGAGTGCATCAACCCCAAGAA
GCAGAGGAAGAAGAAGAACTATAAAAACTCGGGCATCATCATCCTGCGATCCTGCAAGATAAACCGAGACTACTCCTTCCTTGACTACAT
CCTGGGAGGCTGCCAGCTCATGTTCACCGTTGGAATAGACTTTACAGCCTCCAACGGGAATCCCCTCGACCCTTCCTCTTTGCACTATAT
CAACCCTATGGGCACCAACGAATATCTGTCGGCCATCTGGGCTGTTGGGCAGATCATTCAGGACTACGACAGTGATAAGATGTTTCCAGC
TCTGGGATTCGGGGCCCAGTTACCCCCAGACTGGAAGGTCTCCCATGAGTTTGCCATCAACTTCAACCCCACCAACCCCTTCTGCTCAGG
TGTGGATGGTATTGCCCAGGCGTACTCAGCTTGCCTGCCCCACATCCGCTTCTACGGTCCTACCAATTTCTCCCCCATCGTCAACCACGT
GGCCCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGCCACGAGCATTTCCGACATGTGGACCATGGTAAAACAAATGACAGACGTGTT
GTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGCGCATGGAGTTTGTCAGGCAGGCCTTGGCGTACCTTGAGCA
GAGTTATAAGAATTACACCCTTGTGACTGTCTTTGGAAATTTGCATCAGGCCCAGCTGGGCGGGGTGCCTGGGACTTACCAATTGGTTCG
AAGTTTCCTGAACATTAAACTGCCAGCTCCCTTGCCTGGACTACAGGATGGAGAGGTGGAAGGCCATCCTGTGTGGGCGCTAATTTACTA
CTGCATGCGCTGTGGAGACCTGCTTGCCGCTTCACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAGTTTAAAACCTGGTTCCAGGA
GTACATGAACAGCAAGGACAGAAGATTGTCCCCAGCTACGGAAAACAAGCTCCGGCTGCATTACCGTAGGGCCCTCAGGAACAATACAGA
TCCCTACAAGCGGGCCGTGTACTGTATCATTGGCAGATGTGACGTCACCGACAACCAGAGTGAAGTGGCGGACAAAACTGAGGATTACCT
GTGGCTGAAGTTGAACCAAGTGTGTTTTGACGACGATGGCACCAGCTCCCCACAAGACAGGCTCACTCTCTCACAGTTCCAGAAGCAGTT
GTTGGAAGACTATGGCGAGTCCCACTTTACGGTGAACCAGCAACCCTTCCTCTACTTCCAAGTCCTGTTCCTGACAGCGCAGTTTGAAGC
AGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCATGCTGTCCATGTAGCACTGGTGCTGTTTGAGCTGAAGCTGCTTTTAAA
GTCCTCTGGACAGAGTGCTCAGCTCCTCAGCCACGAGCCTGGTGACCCTCCTTGCTTGCGGCGGCTGAACTTCGTGCGGCTCCTCATGCT
GTACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGGCCCTCCAGTACTTCTATTTCCTCAGGGATGAGAAAGATAGTCAAGGAGAAAA
CATGTTTCTGCGCTGTGTGAGTGAGCTTGTGATTGAAAGCCGAGAGTTCGATATGATTCTTGGGAAACTAGAGAATGACGGAAGTAGAAA
GCCTGGAGTCATAGATAAGTTTACTAGTGACACAAAGCCTATTATCAACAAAGTTGCTTCTGTGGCAGAAAATAAAGGACTGTTTGAAGA
GGCAGCAAAGCTGTATGACCTTGCCAAGAATGCTGACAAGGTACTGGAGCTGATGAACAAACTGCTGAGCCCTGTCGTCCCCCAGATCAG
TGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGCACTCTCCATTGCCGAACGGTATAGGGCTCAAGGAATAAGCGCAAATAAATT
TGTGGACTCCACGTTCTATCTTCTTTTGGACTTGATCACCTTTTTTGACGAGTATCATAGTGGTCATATTGATAGAGCTTTTGATATCAT
TGAGCGCTTGAAGCTGGTGCCCCTGAATCAGGAAAGTGTGGAAGAGAGAGTGGCTGCCTTCAGAAATTTCAGTGATGAAATCAGGCACAA
CCTCTCAGAAGTGCTTCTTGCCACCATGAACATCTTGTTCACACAGTTTAAGAGGCTCAAGGGGACAAGTCCATCCTCGTCATCCAGGCC
CCAGCGAGTCATCGAGGACCGCGACTCTGGCCTGGCTCTGTTGCCCAGGCTGGAATGCAATGACACGATCTCAGCTCACTGCAACCTCTA
CCTCTTGGGCTCAAGCCACCCTCCCACCTCACCCTCCCAAGTAGCTGGGACTACAGCAACTCCGAAGTCAAGCCCGCACTCTGATTACCT
TTGCTGGAATGATACCATACCGAACGTCTGGGGACACCAATGCGAGGCTGGTGCAGATGGAGGTCCTCATGAATTAAGTGCCATGCTTTG
TGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCACTAGGCTGGGGTTTCTGGTTTTGTTTCTGTTGTGTTTTGTTT

>In-frame_ENST00000535318_ENST00000569842_TCGA-BS-A0U9-01B_CPNE2_chr16_57171194_+_NUP93_chr16_56857619_length(amino acids)=1128AA_start in transcript=265_stop in transcript=3651
MENGHSMKAWFYGIPPGIGPDCQELLPPPPAPMAHIPSGGAPAAGAAPMGPQYCVCKVELSVSGQNLLDRDVTSKSDPFCVLFTENNGRW
IEYDRTETAINNLNPAFSKKFVLDYHFEEVQKLKFALFDQDKSSMRLDEHDFLGQFSCSLGTIVSSKKITRPLLLLNDKPAGKGLITIAA
QELSDNRVITLSLAGRRLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTLDPVWKPFTVPLVSLCDGDMEKPIQVMCYDYDNDGG
HDFIGEFQTSVSQMCEARDSVPLEFECINPKKQRKKKNYKNSGIIILRSCKINRDYSFLDYILGGCQLMFTVGIDFTASNGNPLDPSSLH
YINPMGTNEYLSAIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNPTNPFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVN
HVARFAAQATQQRTATSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQL
VRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNN
TDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQF
EAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQG
ENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQ
ISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIR
HNLSEVLLATMNILFTQFKRLKGTSPSSSSRPQRVIEDRDSGLALLPRLECNDTISAHCNLYLLGSSHPPTSPSQVAGTTATPKSSPHSD

--------------------------------------------------------------
>In-frame_ENST00000535318_ENST00000564887_TCGA-BS-A0U9-01B_CPNE2_chr16_57171194_+_NUP93_chr16_56857619_length(transcript)=3624nt_BP=1663nt
GGACCGGACCCCGAGCGGCTGGGAGCGCACGCGAGCGGGCCGTGGCCGCGCGGGCAGCGCCCTGAGCCTGTCCCGCGCCCGCGGGCCCGG
CCGAGCAGGAGCAGCTCCCGGGGATGCCCGGGCGGCTCGGAGCGCGGGCAGCGGCAGCCGTGCGGTGAGGGCGGTGGCGCCCGCGGGACC
TGCGGGAACTTGGCCCAGACCCTCCCCCCCTGTGGCCCTCTGGGTCACCATCTGTGAAATGGGCTGATGTTCCGGGGCCTGCCTCCTGGA
GAATGGACACAGCATGAAGGCGTGGTTTTATGGCATTCCGCCTGGCATAGGTCCAGACTGCCAGGAACTCCTGCCACCGCCACCGGCTCC
CATGGCCCACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTGCGTGTGCAAGGTGGAGCTGTCAGT
GAGTGGCCAGAACCTACTGGACCGGGATGTTACCTCCAAGTCCGACCCCTTCTGTGTCCTCTTTACAGAGAACAATGGCAGATGGATCGA
GTACGACAGGACAGAAACCGCGATCAACAACCTCAACCCCGCCTTCTCCAAGAAGTTCGTGCTTGACTACCACTTCGAGGAGGTACAGAA
GCTCAAGTTCGCGCTCTTTGACCAGGACAAGTCCAGTATGCGGCTGGACGAGCATGACTTCCTGGGCCAGTTCTCCTGCAGCCTGGGCAC
GATCGTCTCCAGCAAGAAGATCACTAGGCCTCTGCTGCTGCTGAATGACAAGCCTGCGGGGAAGGGCTTGATTACGATCGCTGCCCAGGA
GCTGTCCGACAACCGCGTCATCACACTAAGCCTGGCGGGCAGGAGGCTGGACAAGAAGGACCTCTTTGGGAAGTCAGACCCCTTTCTGGA
GTTTTATAAGCCAGGAGACGATGGCAAGTGGATGCTGGTCCACAGGACTGAGGTGATCAAGTACACACTGGACCCTGTGTGGAAGCCATT
CACAGTGCCCTTGGTGTCCCTGTGTGATGGGGACATGGAGAAGCCCATCCAGGTCATGTGCTACGACTATGACAATGACGGGGGCCATGA
CTTCATCGGCGAGTTCCAGACCTCAGTGTCACAGATGTGTGAGGCTCGAGACAGCGTCCCGCTGGAGTTCGAGTGCATCAACCCCAAGAA
GCAGAGGAAGAAGAAGAACTATAAAAACTCGGGCATCATCATCCTGCGATCCTGCAAGATAAACCGAGACTACTCCTTCCTTGACTACAT
CCTGGGAGGCTGCCAGCTCATGTTCACCGTTGGAATAGACTTTACAGCCTCCAACGGGAATCCCCTCGACCCTTCCTCTTTGCACTATAT
CAACCCTATGGGCACCAACGAATATCTGTCGGCCATCTGGGCTGTTGGGCAGATCATTCAGGACTACGACAGTGATAAGATGTTTCCAGC
TCTGGGATTCGGGGCCCAGTTACCCCCAGACTGGAAGGTCTCCCATGAGTTTGCCATCAACTTCAACCCCACCAACCCCTTCTGCTCAGG
TGTGGATGGTATTGCCCAGGCGTACTCAGCTTGCCTGCCCCACATCCGCTTCTACGGTCCTACCAATTTCTCCCCCATCGTCAACCACGT
GGCCCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGCCACGAGCATTTCCGACATGTGGACCATGGTAAAACAAATGACAGACGTGTT
GTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGCGCATGGAGTTTGTCAGGCAGGCCTTGGCGTACCTTGAGCA
GAGTTATAAGAATTACACCCTTGTGACTGTCTTTGGAAATTTGCATCAGGCCCAGCTGGGCGGGGTGCCTGGGACTTACCAATTGGTTCG
AAGTTTCCTGAACATTAAACTGCCAGCTCCCTTGCCTGGACTACAGGATGGAGAGGTGGAAGGCCATCCTGTGTGGGCGCTAATTTACTA
CTGCATGCGCTGTGGAGACCTGCTTGCCGCTTCACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAGTTTAAAACCTGGTTCCAGGA
GTACATGAACAGCAAGGACAGAAGATTGTCCCCAGCTACGGAAAACAAGCTCCGGCTGCATTACCGTAGGGCCCTCAGGAACAATACAGA
TCCCTACAAGCGGGCCGTGTACTGTATCATTGGCAGATGTGACGTCACCGACAACCAGAGTGAAGTGGCGGACAAAACTGAGGATTACCT
GTGGCTGAAGTTGAACCAAGTGTGTTTTGACGACGATGGCACCAGCTCCCCACAAGACAGGCTCACTCTCTCACAGTTCCAGAAGCAGTT
GTTGGAAGACTATGGCGAGTCCCACTTTACGGTGAACCAGCAACCCTTCCTCTACTTCCAAGTCCTGTTCCTGACAGCGCAGTTTGAAGC
AGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCATGCTGTCCATGTAGCACTGGTGCTGTTTGAGCTGAAGCTGCTTTTAAA
GTCCTCTGGACAGAGTGCTCAGCTCCTCAGCCACGAGCCTGGTGACCCTCCTTGCTTGCGGCGGCTGAACTTCGTGCGGCTCCTCATGCT
GTACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGGCCCTCCAGTACTTCTATTTCCTCAGGGATGAGAAAGATAGTCAAGGAGAAAA
CATGTTTCTGCGCTGTGTGAGTGAGCTTGTGATTGAAAGCCGAGAGTTCGATATGATTCTTGGGAAACTAGAGAATGACGGAAGTAGAAA
GCCTGGAGTCATAGATAAGTTTACTAGTGACACAAAGCCTATTATCAACAAAGTTGCTTCTGTGGCAGAAAATAAAGGACTGTTTGAAGA
GGCAGCAAAGCTGTATGACCTTGCCAAGAATGCTGACAAGGTACTGGAGCTGATGAACAAACTGCTGAGCCCTGTCGTCCCCCAGATCAG
TGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGCACTCTCCATTGCCGAACGGTATAGGGCTCAAGGAATAAGCGCAAATAAATT
TGTGGACTCCACGTTCTATCTTCTTTTGGACTTGATCACCTTTTTTGACGAGTATCATAGTGGTCATATTGATAGAGCTTTTGATATCAT
TGAGCGCTTGAAGCTGGTGCCCCTGAATCAGGAAAGTGTGGAAGAGAGAGTGGCTGCCTTCAGAAATTTCAGTGATGAAATCAGGCACAA
CCTCTCAGAAGTGCTTCTTGCCACCATGAACATCTTGTTCACACAGTTTAAGAGGCTCAAGGGGACAAGTCCATCCTCGTCATCCAGGCC
CCAGCGAGTCATCGAGGACCGCGACTCTCAACTCCGAAGTCAAGCCCGCACTCTGATTACCTTTGCTGGAATGATACCATACCGAACGTC
TGGGGACACCAATGCGAGGCTGGTGCAGATGGAGGTCCTCATGAATTAAGTGCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGT
ACATCAGGCACATGGGCCCACTAGGCTGGGGTTTCTGGTTTTGTTTCTGTTGTGTTTTGTTTTGGTTTCTGTATTATGTATTTTTGTCAA

>In-frame_ENST00000535318_ENST00000564887_TCGA-BS-A0U9-01B_CPNE2_chr16_57171194_+_NUP93_chr16_56857619_length(amino acids)=1067AA_start in transcript=265_stop in transcript=3468
MENGHSMKAWFYGIPPGIGPDCQELLPPPPAPMAHIPSGGAPAAGAAPMGPQYCVCKVELSVSGQNLLDRDVTSKSDPFCVLFTENNGRW
IEYDRTETAINNLNPAFSKKFVLDYHFEEVQKLKFALFDQDKSSMRLDEHDFLGQFSCSLGTIVSSKKITRPLLLLNDKPAGKGLITIAA
QELSDNRVITLSLAGRRLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTLDPVWKPFTVPLVSLCDGDMEKPIQVMCYDYDNDGG
HDFIGEFQTSVSQMCEARDSVPLEFECINPKKQRKKKNYKNSGIIILRSCKINRDYSFLDYILGGCQLMFTVGIDFTASNGNPLDPSSLH
YINPMGTNEYLSAIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNPTNPFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVN
HVARFAAQATQQRTATSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQL
VRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNN
TDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQF
EAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQG
ENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQ
ISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIR

--------------------------------------------------------------
>In-frame_ENST00000565874_ENST00000308159_TCGA-BS-A0U9-01B_CPNE2_chr16_57171194_+_NUP93_chr16_56857619_length(transcript)=3460nt_BP=1494nt
TTTCTTCAAACCTTTGCCTATGTTATTTGACAACCCGCCTCAATTTGCCTTCCATCTCTCCACTCACCTCTTAAAGGCCAGGTGGTAATG
CCTCCCTATGGTGGGGCAGCATAGCAGGTGTCTGTCCACTCTCTGACCCTCACTTCTGTTCCCCTAGACTGCCAGGAACTCCTGCCACCG
CCACCGGCTCCCATGGCCCACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTGCGTGTGCAAGGTG
GAGCTGTCAGTGAGTGGCCAGAACCTACTGGACCGGGATGTTACCTCCAAGTCCGACCCCTTCTGTGTCCTCTTTACAGAGAACAATGGC
AGATGGATCGAGTACGACAGGACAGAAACCGCGATCAACAACCTCAACCCCGCCTTCTCCAAGAAGTTCGTGCTTGACTACCACTTCGAG
GAGGTACAGAAGCTCAAGTTCGCGCTCTTTGACCAGGACAAGTCCAGTATGCGGCTGGACGAGCATGACTTCCTGGGCCAGTTCTCCTGC
AGCCTGGGCACGATCGTCTCCAGCAAGAAGATCACTAGGCCTCTGCTGCTGCTGAATGACAAGCCTGCGGGGAAGGGCTTGATTACGATC
GCTGCCCAGGAGCTGTCCGACAACCGCGTCATCACACTAAGCCTGGCGGGCAGGAGGCTGGACAAGAAGGACCTCTTTGGGAAGTCAGAC
CCCTTTCTGGAGTTTTATAAGCCAGGAGACGATGGCAAGTGGATGCTGGTCCACAGGACTGAGGTGATCAAGTACACACTGGACCCTGTG
TGGAAGCCATTCACAGTGCCCTTGGTGTCCCTGTGTGATGGGGACATGGAGAAGCCCATCCAGGTCATGTGCTACGACTATGACAATGAC
GGGGGCCATGACTTCATCGGCGAGTTCCAGACCTCAGTGTCACAGATGTGTGAGGCTCGAGACAGCGTCCCGCTGGAGTTCGAGTGCATC
AACCCCAAGAAGCAGAGGAAGAAGAAGAACTATAAAAACTCGGGCATCATCATCCTGCGATCCTGCAAGATAAACCGAGACTACTCCTTC
CTTGACTACATCCTGGGAGGCTGCCAGCTCATGTTCACCGTTGGAATAGACTTTACAGCCTCCAACGGGAATCCCCTCGACCCTTCCTCT
TTGCACTATATCAACCCTATGGGCACCAACGAATATCTGTCGGCCATCTGGGCTGTTGGGCAGATCATTCAGGACTACGACAGTGATAAG
ATGTTTCCAGCTCTGGGATTCGGGGCCCAGTTACCCCCAGACTGGAAGGTCTCCCATGAGTTTGCCATCAACTTCAACCCCACCAACCCC
TTCTGCTCAGGTGTGGATGGTATTGCCCAGGCGTACTCAGCTTGCCTGCCCCACATCCGCTTCTACGGTCCTACCAATTTCTCCCCCATC
GTCAACCACGTGGCCCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGCCACGAGCATTTCCGACATGTGGACCATGGTAAAACAAATG
ACAGACGTGTTGTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGCGCATGGAGTTTGTCAGGCAGGCCTTGGCG
TACCTTGAGCAGAGTTATAAGAATTACACCCTTGTGACTGTCTTTGGAAATTTGCATCAGGCCCAGCTGGGCGGGGTGCCTGGGACTTAC
CAATTGGTTCGAAGTTTCCTGAACATTAAACTGCCAGCTCCCTTGCCTGGACTACAGGATGGAGAGGTGGAAGGCCATCCTGTGTGGGCG
CTAATTTACTACTGCATGCGCTGTGGAGACCTGCTTGCCGCTTCACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAGTTTAAAACC
TGGTTCCAGGAGTACATGAACAGCAAGGACAGAAGATTGTCCCCAGCTACGGAAAACAAGCTCCGGCTGCATTACCGTAGGGCCCTCAGG
AACAATACAGATCCCTACAAGCGGGCCGTGTACTGTATCATTGGCAGATGTGACGTCACCGACAACCAGAGTGAAGTGGCGGACAAAACT
GAGGATTACCTGTGGCTGAAGTTGAACCAAGTGTGTTTTGACGACGATGGCACCAGCTCCCCACAAGACAGGCTCACTCTCTCACAGTTC
CAGAAGCAGTTGTTGGAAGACTATGGCGAGTCCCACTTTACGGTGAACCAGCAACCCTTCCTCTACTTCCAAGTCCTGTTCCTGACAGCG
CAGTTTGAAGCAGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCATGCTGTCCATGTAGCACTGGTGCTGTTTGAGCTGAAG
CTGCTTTTAAAGTCCTCTGGACAGAGTGCTCAGCTCCTCAGCCACGAGCCTGGTGACCCTCCTTGCTTGCGGCGGCTGAACTTCGTGCGG
CTCCTCATGCTGTACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGGCCCTCCAGTACTTCTATTTCCTCAGGGATGAGAAAGATAGT
CAAGGAGAAAACATGTTTCTGCGCTGTGTGAGTGAGCTTGTGATTGAAAGCCGAGAGTTCGATATGATTCTTGGGAAACTAGAGAATGAC
GGAAGTAGAAAGCCTGGAGTCATAGATAAGTTTACTAGTGACACAAAGCCTATTATCAACAAAGTTGCTTCTGTGGCAGAAAATAAAGGA
CTGTTTGAAGAGGCAGCAAAGCTGTATGACCTTGCCAAGAATGCTGACAAGGTACTGGAGCTGATGAACAAACTGCTGAGCCCTGTCGTC
CCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGCACTCTCCATTGCCGAACGGTATAGGGCTCAAGGAATAAGC
GCAAATAAATTTGTGGACTCCACGTTCTATCTTCTTTTGGACTTGATCACCTTTTTTGACGAGTATCATAGTGGTCATATTGATAGAGCT
TTTGATATCATTGAGCGCTTGAAGCTGGTGCCCCTGAATCAGGAAAGTGTGGAAGAGAGAGTGGCTGCCTTCAGAAATTTCAGTGATGAA
ATCAGGCACAACCTCTCAGAAGTGCTTCTTGCCACCATGAACATCTTGTTCACACAGTTTAAGAGGCTCAAGGGGACAAGTCCATCCTCG
TCATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACTCTCAACTCCGAAGTCAAGCCCGCACTCTGATTACCTTTGCTGGAATGATACCA
TACCGAACGTCTGGGGACACCAATGCGAGGCTGGTGCAGATGGAGGTCCTCATGAATTAAGTGCCATGCTTTGTGGGAGTCTGGGTCGGC
ACACTGTCAGTACATCAGGCACATGGGCCCACTAGGCTGGGGTTTCTGGTTTTGTTTCTGTTGTGTTTTGTTTTGGTTTCTGTATTATGT

>In-frame_ENST00000565874_ENST00000308159_TCGA-BS-A0U9-01B_CPNE2_chr16_57171194_+_NUP93_chr16_56857619_length(amino acids)=1055AA_start in transcript=132_stop in transcript=3299
MTLTSVPLDCQELLPPPPAPMAHIPSGGAPAAGAAPMGPQYCVCKVELSVSGQNLLDRDVTSKSDPFCVLFTENNGRWIEYDRTETAINN
LNPAFSKKFVLDYHFEEVQKLKFALFDQDKSSMRLDEHDFLGQFSCSLGTIVSSKKITRPLLLLNDKPAGKGLITIAAQELSDNRVITLS
LAGRRLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTLDPVWKPFTVPLVSLCDGDMEKPIQVMCYDYDNDGGHDFIGEFQTSVS
QMCEARDSVPLEFECINPKKQRKKKNYKNSGIIILRSCKINRDYSFLDYILGGCQLMFTVGIDFTASNGNPLDPSSLHYINPMGTNEYLS
AIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNPTNPFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVNHVARFAAQATQQ
RTATSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAP
LPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCII
GRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMER
LRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELV
IESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKERLK
NMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMN

--------------------------------------------------------------
>In-frame_ENST00000565874_ENST00000569842_TCGA-BS-A0U9-01B_CPNE2_chr16_57171194_+_NUP93_chr16_56857619_length(transcript)=3578nt_BP=1494nt
TTTCTTCAAACCTTTGCCTATGTTATTTGACAACCCGCCTCAATTTGCCTTCCATCTCTCCACTCACCTCTTAAAGGCCAGGTGGTAATG
CCTCCCTATGGTGGGGCAGCATAGCAGGTGTCTGTCCACTCTCTGACCCTCACTTCTGTTCCCCTAGACTGCCAGGAACTCCTGCCACCG
CCACCGGCTCCCATGGCCCACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTGCGTGTGCAAGGTG
GAGCTGTCAGTGAGTGGCCAGAACCTACTGGACCGGGATGTTACCTCCAAGTCCGACCCCTTCTGTGTCCTCTTTACAGAGAACAATGGC
AGATGGATCGAGTACGACAGGACAGAAACCGCGATCAACAACCTCAACCCCGCCTTCTCCAAGAAGTTCGTGCTTGACTACCACTTCGAG
GAGGTACAGAAGCTCAAGTTCGCGCTCTTTGACCAGGACAAGTCCAGTATGCGGCTGGACGAGCATGACTTCCTGGGCCAGTTCTCCTGC
AGCCTGGGCACGATCGTCTCCAGCAAGAAGATCACTAGGCCTCTGCTGCTGCTGAATGACAAGCCTGCGGGGAAGGGCTTGATTACGATC
GCTGCCCAGGAGCTGTCCGACAACCGCGTCATCACACTAAGCCTGGCGGGCAGGAGGCTGGACAAGAAGGACCTCTTTGGGAAGTCAGAC
CCCTTTCTGGAGTTTTATAAGCCAGGAGACGATGGCAAGTGGATGCTGGTCCACAGGACTGAGGTGATCAAGTACACACTGGACCCTGTG
TGGAAGCCATTCACAGTGCCCTTGGTGTCCCTGTGTGATGGGGACATGGAGAAGCCCATCCAGGTCATGTGCTACGACTATGACAATGAC
GGGGGCCATGACTTCATCGGCGAGTTCCAGACCTCAGTGTCACAGATGTGTGAGGCTCGAGACAGCGTCCCGCTGGAGTTCGAGTGCATC
AACCCCAAGAAGCAGAGGAAGAAGAAGAACTATAAAAACTCGGGCATCATCATCCTGCGATCCTGCAAGATAAACCGAGACTACTCCTTC
CTTGACTACATCCTGGGAGGCTGCCAGCTCATGTTCACCGTTGGAATAGACTTTACAGCCTCCAACGGGAATCCCCTCGACCCTTCCTCT
TTGCACTATATCAACCCTATGGGCACCAACGAATATCTGTCGGCCATCTGGGCTGTTGGGCAGATCATTCAGGACTACGACAGTGATAAG
ATGTTTCCAGCTCTGGGATTCGGGGCCCAGTTACCCCCAGACTGGAAGGTCTCCCATGAGTTTGCCATCAACTTCAACCCCACCAACCCC
TTCTGCTCAGGTGTGGATGGTATTGCCCAGGCGTACTCAGCTTGCCTGCCCCACATCCGCTTCTACGGTCCTACCAATTTCTCCCCCATC
GTCAACCACGTGGCCCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGCCACGAGCATTTCCGACATGTGGACCATGGTAAAACAAATG
ACAGACGTGTTGTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGCGCATGGAGTTTGTCAGGCAGGCCTTGGCG
TACCTTGAGCAGAGTTATAAGAATTACACCCTTGTGACTGTCTTTGGAAATTTGCATCAGGCCCAGCTGGGCGGGGTGCCTGGGACTTAC
CAATTGGTTCGAAGTTTCCTGAACATTAAACTGCCAGCTCCCTTGCCTGGACTACAGGATGGAGAGGTGGAAGGCCATCCTGTGTGGGCG
CTAATTTACTACTGCATGCGCTGTGGAGACCTGCTTGCCGCTTCACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAGTTTAAAACC
TGGTTCCAGGAGTACATGAACAGCAAGGACAGAAGATTGTCCCCAGCTACGGAAAACAAGCTCCGGCTGCATTACCGTAGGGCCCTCAGG
AACAATACAGATCCCTACAAGCGGGCCGTGTACTGTATCATTGGCAGATGTGACGTCACCGACAACCAGAGTGAAGTGGCGGACAAAACT
GAGGATTACCTGTGGCTGAAGTTGAACCAAGTGTGTTTTGACGACGATGGCACCAGCTCCCCACAAGACAGGCTCACTCTCTCACAGTTC
CAGAAGCAGTTGTTGGAAGACTATGGCGAGTCCCACTTTACGGTGAACCAGCAACCCTTCCTCTACTTCCAAGTCCTGTTCCTGACAGCG
CAGTTTGAAGCAGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCATGCTGTCCATGTAGCACTGGTGCTGTTTGAGCTGAAG
CTGCTTTTAAAGTCCTCTGGACAGAGTGCTCAGCTCCTCAGCCACGAGCCTGGTGACCCTCCTTGCTTGCGGCGGCTGAACTTCGTGCGG
CTCCTCATGCTGTACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGGCCCTCCAGTACTTCTATTTCCTCAGGGATGAGAAAGATAGT
CAAGGAGAAAACATGTTTCTGCGCTGTGTGAGTGAGCTTGTGATTGAAAGCCGAGAGTTCGATATGATTCTTGGGAAACTAGAGAATGAC
GGAAGTAGAAAGCCTGGAGTCATAGATAAGTTTACTAGTGACACAAAGCCTATTATCAACAAAGTTGCTTCTGTGGCAGAAAATAAAGGA
CTGTTTGAAGAGGCAGCAAAGCTGTATGACCTTGCCAAGAATGCTGACAAGGTACTGGAGCTGATGAACAAACTGCTGAGCCCTGTCGTC
CCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGCACTCTCCATTGCCGAACGGTATAGGGCTCAAGGAATAAGC
GCAAATAAATTTGTGGACTCCACGTTCTATCTTCTTTTGGACTTGATCACCTTTTTTGACGAGTATCATAGTGGTCATATTGATAGAGCT
TTTGATATCATTGAGCGCTTGAAGCTGGTGCCCCTGAATCAGGAAAGTGTGGAAGAGAGAGTGGCTGCCTTCAGAAATTTCAGTGATGAA
ATCAGGCACAACCTCTCAGAAGTGCTTCTTGCCACCATGAACATCTTGTTCACACAGTTTAAGAGGCTCAAGGGGACAAGTCCATCCTCG
TCATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACTCTGGCCTGGCTCTGTTGCCCAGGCTGGAATGCAATGACACGATCTCAGCTCAC
TGCAACCTCTACCTCTTGGGCTCAAGCCACCCTCCCACCTCACCCTCCCAAGTAGCTGGGACTACAGCAACTCCGAAGTCAAGCCCGCAC
TCTGATTACCTTTGCTGGAATGATACCATACCGAACGTCTGGGGACACCAATGCGAGGCTGGTGCAGATGGAGGTCCTCATGAATTAAGT
GCCATGCTTTGTGGGAGTCTGGGTCGGCACACTGTCAGTACATCAGGCACATGGGCCCACTAGGCTGGGGTTTCTGGTTTTGTTTCTGTT

>In-frame_ENST00000565874_ENST00000569842_TCGA-BS-A0U9-01B_CPNE2_chr16_57171194_+_NUP93_chr16_56857619_length(amino acids)=1116AA_start in transcript=132_stop in transcript=3482
MTLTSVPLDCQELLPPPPAPMAHIPSGGAPAAGAAPMGPQYCVCKVELSVSGQNLLDRDVTSKSDPFCVLFTENNGRWIEYDRTETAINN
LNPAFSKKFVLDYHFEEVQKLKFALFDQDKSSMRLDEHDFLGQFSCSLGTIVSSKKITRPLLLLNDKPAGKGLITIAAQELSDNRVITLS
LAGRRLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTLDPVWKPFTVPLVSLCDGDMEKPIQVMCYDYDNDGGHDFIGEFQTSVS
QMCEARDSVPLEFECINPKKQRKKKNYKNSGIIILRSCKINRDYSFLDYILGGCQLMFTVGIDFTASNGNPLDPSSLHYINPMGTNEYLS
AIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNPTNPFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVNHVARFAAQATQQ
RTATSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAP
LPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCII
GRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMER
LRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELV
IESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKERLK
NMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMN
ILFTQFKRLKGTSPSSSSRPQRVIEDRDSGLALLPRLECNDTISAHCNLYLLGSSHPPTSPSQVAGTTATPKSSPHSDYLCWNDTIPNVW

--------------------------------------------------------------
>In-frame_ENST00000565874_ENST00000564887_TCGA-BS-A0U9-01B_CPNE2_chr16_57171194_+_NUP93_chr16_56857619_length(transcript)=3455nt_BP=1494nt
TTTCTTCAAACCTTTGCCTATGTTATTTGACAACCCGCCTCAATTTGCCTTCCATCTCTCCACTCACCTCTTAAAGGCCAGGTGGTAATG
CCTCCCTATGGTGGGGCAGCATAGCAGGTGTCTGTCCACTCTCTGACCCTCACTTCTGTTCCCCTAGACTGCCAGGAACTCCTGCCACCG
CCACCGGCTCCCATGGCCCACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTGCGTGTGCAAGGTG
GAGCTGTCAGTGAGTGGCCAGAACCTACTGGACCGGGATGTTACCTCCAAGTCCGACCCCTTCTGTGTCCTCTTTACAGAGAACAATGGC
AGATGGATCGAGTACGACAGGACAGAAACCGCGATCAACAACCTCAACCCCGCCTTCTCCAAGAAGTTCGTGCTTGACTACCACTTCGAG
GAGGTACAGAAGCTCAAGTTCGCGCTCTTTGACCAGGACAAGTCCAGTATGCGGCTGGACGAGCATGACTTCCTGGGCCAGTTCTCCTGC
AGCCTGGGCACGATCGTCTCCAGCAAGAAGATCACTAGGCCTCTGCTGCTGCTGAATGACAAGCCTGCGGGGAAGGGCTTGATTACGATC
GCTGCCCAGGAGCTGTCCGACAACCGCGTCATCACACTAAGCCTGGCGGGCAGGAGGCTGGACAAGAAGGACCTCTTTGGGAAGTCAGAC
CCCTTTCTGGAGTTTTATAAGCCAGGAGACGATGGCAAGTGGATGCTGGTCCACAGGACTGAGGTGATCAAGTACACACTGGACCCTGTG
TGGAAGCCATTCACAGTGCCCTTGGTGTCCCTGTGTGATGGGGACATGGAGAAGCCCATCCAGGTCATGTGCTACGACTATGACAATGAC
GGGGGCCATGACTTCATCGGCGAGTTCCAGACCTCAGTGTCACAGATGTGTGAGGCTCGAGACAGCGTCCCGCTGGAGTTCGAGTGCATC
AACCCCAAGAAGCAGAGGAAGAAGAAGAACTATAAAAACTCGGGCATCATCATCCTGCGATCCTGCAAGATAAACCGAGACTACTCCTTC
CTTGACTACATCCTGGGAGGCTGCCAGCTCATGTTCACCGTTGGAATAGACTTTACAGCCTCCAACGGGAATCCCCTCGACCCTTCCTCT
TTGCACTATATCAACCCTATGGGCACCAACGAATATCTGTCGGCCATCTGGGCTGTTGGGCAGATCATTCAGGACTACGACAGTGATAAG
ATGTTTCCAGCTCTGGGATTCGGGGCCCAGTTACCCCCAGACTGGAAGGTCTCCCATGAGTTTGCCATCAACTTCAACCCCACCAACCCC
TTCTGCTCAGGTGTGGATGGTATTGCCCAGGCGTACTCAGCTTGCCTGCCCCACATCCGCTTCTACGGTCCTACCAATTTCTCCCCCATC
GTCAACCACGTGGCCCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGCCACGAGCATTTCCGACATGTGGACCATGGTAAAACAAATG
ACAGACGTGTTGTTGACACCGGCAACGGATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGCGCATGGAGTTTGTCAGGCAGGCCTTGGCG
TACCTTGAGCAGAGTTATAAGAATTACACCCTTGTGACTGTCTTTGGAAATTTGCATCAGGCCCAGCTGGGCGGGGTGCCTGGGACTTAC
CAATTGGTTCGAAGTTTCCTGAACATTAAACTGCCAGCTCCCTTGCCTGGACTACAGGATGGAGAGGTGGAAGGCCATCCTGTGTGGGCG
CTAATTTACTACTGCATGCGCTGTGGAGACCTGCTTGCCGCTTCACAGGTAGTTAATCGAGCCCAGCACCAGCTGGGAGAGTTTAAAACC
TGGTTCCAGGAGTACATGAACAGCAAGGACAGAAGATTGTCCCCAGCTACGGAAAACAAGCTCCGGCTGCATTACCGTAGGGCCCTCAGG
AACAATACAGATCCCTACAAGCGGGCCGTGTACTGTATCATTGGCAGATGTGACGTCACCGACAACCAGAGTGAAGTGGCGGACAAAACT
GAGGATTACCTGTGGCTGAAGTTGAACCAAGTGTGTTTTGACGACGATGGCACCAGCTCCCCACAAGACAGGCTCACTCTCTCACAGTTC
CAGAAGCAGTTGTTGGAAGACTATGGCGAGTCCCACTTTACGGTGAACCAGCAACCCTTCCTCTACTTCCAAGTCCTGTTCCTGACAGCG
CAGTTTGAAGCAGCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCATGCTGTCCATGTAGCACTGGTGCTGTTTGAGCTGAAG
CTGCTTTTAAAGTCCTCTGGACAGAGTGCTCAGCTCCTCAGCCACGAGCCTGGTGACCCTCCTTGCTTGCGGCGGCTGAACTTCGTGCGG
CTCCTCATGCTGTACACCCGGAAGTTTGAGTCCACGGACCCAAGGGAGGCCCTCCAGTACTTCTATTTCCTCAGGGATGAGAAAGATAGT
CAAGGAGAAAACATGTTTCTGCGCTGTGTGAGTGAGCTTGTGATTGAAAGCCGAGAGTTCGATATGATTCTTGGGAAACTAGAGAATGAC
GGAAGTAGAAAGCCTGGAGTCATAGATAAGTTTACTAGTGACACAAAGCCTATTATCAACAAAGTTGCTTCTGTGGCAGAAAATAAAGGA
CTGTTTGAAGAGGCAGCAAAGCTGTATGACCTTGCCAAGAATGCTGACAAGGTACTGGAGCTGATGAACAAACTGCTGAGCCCTGTCGTC
CCCCAGATCAGTGCCCCGCAATCCAACAAGGAGAGGCTGAAGAACATGGCACTCTCCATTGCCGAACGGTATAGGGCTCAAGGAATAAGC
GCAAATAAATTTGTGGACTCCACGTTCTATCTTCTTTTGGACTTGATCACCTTTTTTGACGAGTATCATAGTGGTCATATTGATAGAGCT
TTTGATATCATTGAGCGCTTGAAGCTGGTGCCCCTGAATCAGGAAAGTGTGGAAGAGAGAGTGGCTGCCTTCAGAAATTTCAGTGATGAA
ATCAGGCACAACCTCTCAGAAGTGCTTCTTGCCACCATGAACATCTTGTTCACACAGTTTAAGAGGCTCAAGGGGACAAGTCCATCCTCG
TCATCCAGGCCCCAGCGAGTCATCGAGGACCGCGACTCTCAACTCCGAAGTCAAGCCCGCACTCTGATTACCTTTGCTGGAATGATACCA
TACCGAACGTCTGGGGACACCAATGCGAGGCTGGTGCAGATGGAGGTCCTCATGAATTAAGTGCCATGCTTTGTGGGAGTCTGGGTCGGC
ACACTGTCAGTACATCAGGCACATGGGCCCACTAGGCTGGGGTTTCTGGTTTTGTTTCTGTTGTGTTTTGTTTTGGTTTCTGTATTATGT

>In-frame_ENST00000565874_ENST00000564887_TCGA-BS-A0U9-01B_CPNE2_chr16_57171194_+_NUP93_chr16_56857619_length(amino acids)=1055AA_start in transcript=132_stop in transcript=3299
MTLTSVPLDCQELLPPPPAPMAHIPSGGAPAAGAAPMGPQYCVCKVELSVSGQNLLDRDVTSKSDPFCVLFTENNGRWIEYDRTETAINN
LNPAFSKKFVLDYHFEEVQKLKFALFDQDKSSMRLDEHDFLGQFSCSLGTIVSSKKITRPLLLLNDKPAGKGLITIAAQELSDNRVITLS
LAGRRLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTLDPVWKPFTVPLVSLCDGDMEKPIQVMCYDYDNDGGHDFIGEFQTSVS
QMCEARDSVPLEFECINPKKQRKKKNYKNSGIIILRSCKINRDYSFLDYILGGCQLMFTVGIDFTASNGNPLDPSSLHYINPMGTNEYLS
AIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNPTNPFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVNHVARFAAQATQQ
RTATSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAP
LPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCII
GRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMER
LRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELV
IESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKERLK
NMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMN

--------------------------------------------------------------

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Fusion Gene PPI Analysis for CPNE2-NUP93

Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in
ChiPPI page.

Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)

Hgene

Hgene's interactors

Tgene

Tgene's interactors

- Retained PPIs in in-frame fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Still interaction with

- Lost PPIs in in-frame fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Interaction lost with

- Retained PPIs, but lost function due to frame-shift fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Interaction lost with

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Related Drugs for CPNE2-NUP93

Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)

Partner

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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Related Diseases for CPNE2-NUP93

Diseases associated with fusion partners.
(DisGeNet 4.0)

Partner	Gene	Disease ID	Disease name	# pubmeds	Source
Tgene	NUP93	C1868672	NEPHROTIC SYNDROME, STEROID-RESISTANT, AUTOSOMAL RECESSIVE	1	CTD_human;ORPHANET
Tgene	NUP93	C4225166	NEPHROTIC SYNDROME, TYPE 12	1	CTD_human;GENOMICS_ENGLAND;UNIPROT