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 | Fusion Gene Summary |
| Fusion Gene ORF analysis |
| Fusion Genomic Features |
| Fusion Protein Features |
| Fusion Gene Sequence |
| Fusion Gene PPI analysis |
| Related Drugs |
| Related Diseases |
Fusion gene:CTTN-CLASP2 (FusionGDB2 ID:20551) |
Fusion Gene Summary for CTTN-CLASP2 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: CTTN-CLASP2 | Fusion gene ID: 20551 | Hgene | Tgene | Gene symbol | CTTN | CLASP2 | Gene ID | 2017 | 23122 |
| Gene name | cortactin | cytoplasmic linker associated protein 2 | |
| Synonyms | EMS1 | - | |
| Cytomap | 11q13.3 | 3p22.3 | |
| Type of gene | protein-coding | protein-coding | |
| Description | src substrate cortactin1110020L01Rikamplaxinems1 sequence (mammary tumor and squamous cell carcinoma-associated (p80/85 src substrate)epididymis secretory sperm binding proteinoncogene EMS1 | CLIP-associating protein 2CLIP-associating protein CLASP2multiple asters (Mast)-like homolog 2protein Orbit homolog 2 | |
| Modification date | 20200327 | 20200313 | |
| UniProtAcc | Q14247 | O75122 | |
| Ensembl transtripts involved in fusion gene | ENST00000346329, ENST00000301843, ENST00000527622, ENST00000376561, ENST00000538675, | ENST00000468888, ENST00000399362, ENST00000539981, ENST00000359576, ENST00000307312, ENST00000480013, ENST00000461133, ENST00000313350, ENST00000487200, ENST00000333778, ENST00000482896, | |
| Fusion gene scores | * DoF score | 35 X 27 X 11=10395 | 15 X 10 X 9=1350 |
| # samples | 43 | 15 | |
| ** MAII score | log2(43/10395*10)=-4.59540928815627 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(15/1350*10)=-3.16992500144231 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: CTTN [Title/Abstract] AND CLASP2 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint | CTTN(70282681)-CLASP2(33602368), # samples:1 | ||
| Anticipated loss of major functional domain due to fusion event. | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Fusion gene breakpoints across CTTN (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
| Fusion gene breakpoints across CLASP2 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
| Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB4 | SKCM | TCGA-ER-A19T-01A | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
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Fusion Gene ORF analysis for CTTN-CLASP2 |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| 3UTR-3CDS | ENST00000346329 | ENST00000468888 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| 3UTR-3CDS | ENST00000346329 | ENST00000399362 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| 3UTR-3CDS | ENST00000346329 | ENST00000539981 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| 3UTR-3CDS | ENST00000346329 | ENST00000359576 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| 3UTR-3CDS | ENST00000346329 | ENST00000307312 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| 3UTR-3CDS | ENST00000346329 | ENST00000480013 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| 3UTR-3CDS | ENST00000346329 | ENST00000461133 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| 3UTR-intron | ENST00000346329 | ENST00000313350 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| 3UTR-intron | ENST00000346329 | ENST00000487200 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| 3UTR-intron | ENST00000346329 | ENST00000333778 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| 3UTR-intron | ENST00000346329 | ENST00000482896 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| In-frame | ENST00000301843 | ENST00000468888 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| In-frame | ENST00000301843 | ENST00000399362 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| In-frame | ENST00000301843 | ENST00000539981 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| In-frame | ENST00000301843 | ENST00000359576 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| In-frame | ENST00000301843 | ENST00000307312 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| In-frame | ENST00000301843 | ENST00000480013 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| In-frame | ENST00000301843 | ENST00000461133 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| 5CDS-intron | ENST00000301843 | ENST00000313350 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| 5CDS-intron | ENST00000301843 | ENST00000487200 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| 5CDS-intron | ENST00000301843 | ENST00000333778 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| 5CDS-intron | ENST00000301843 | ENST00000482896 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| intron-3CDS | ENST00000527622 | ENST00000468888 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| intron-3CDS | ENST00000527622 | ENST00000399362 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| intron-3CDS | ENST00000527622 | ENST00000539981 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| intron-3CDS | ENST00000527622 | ENST00000359576 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| intron-3CDS | ENST00000527622 | ENST00000307312 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| intron-3CDS | ENST00000527622 | ENST00000480013 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| intron-3CDS | ENST00000527622 | ENST00000461133 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| intron-intron | ENST00000527622 | ENST00000313350 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| intron-intron | ENST00000527622 | ENST00000487200 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| intron-intron | ENST00000527622 | ENST00000333778 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| intron-intron | ENST00000527622 | ENST00000482896 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| In-frame | ENST00000376561 | ENST00000468888 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| In-frame | ENST00000376561 | ENST00000399362 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| In-frame | ENST00000376561 | ENST00000539981 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| In-frame | ENST00000376561 | ENST00000359576 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| In-frame | ENST00000376561 | ENST00000307312 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| In-frame | ENST00000376561 | ENST00000480013 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| In-frame | ENST00000376561 | ENST00000461133 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| 5CDS-intron | ENST00000376561 | ENST00000313350 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| 5CDS-intron | ENST00000376561 | ENST00000487200 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| 5CDS-intron | ENST00000376561 | ENST00000333778 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| 5CDS-intron | ENST00000376561 | ENST00000482896 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| intron-3CDS | ENST00000538675 | ENST00000468888 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| intron-3CDS | ENST00000538675 | ENST00000399362 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| intron-3CDS | ENST00000538675 | ENST00000539981 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| intron-3CDS | ENST00000538675 | ENST00000359576 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| intron-3CDS | ENST00000538675 | ENST00000307312 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| intron-3CDS | ENST00000538675 | ENST00000480013 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| intron-3CDS | ENST00000538675 | ENST00000461133 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| intron-intron | ENST00000538675 | ENST00000313350 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| intron-intron | ENST00000538675 | ENST00000487200 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| intron-intron | ENST00000538675 | ENST00000333778 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| intron-intron | ENST00000538675 | ENST00000482896 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - |
| ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
| ENST00000301843 | CTTN | chr11 | 70282681 | - | ENST00000468888 | CLASP2 | chr3 | 33602368 | - | 7318 | 3272 | 206 | 1858 | 550 |
| ENST00000301843 | CTTN | chr11 | 70282681 | - | ENST00000399362 | CLASP2 | chr3 | 33602368 | - | 7318 | 3272 | 206 | 1858 | 550 |
| ENST00000301843 | CTTN | chr11 | 70282681 | - | ENST00000539981 | CLASP2 | chr3 | 33602368 | - | 7314 | 3272 | 206 | 1858 | 550 |
| ENST00000301843 | CTTN | chr11 | 70282681 | - | ENST00000359576 | CLASP2 | chr3 | 33602368 | - | 7314 | 3272 | 206 | 1858 | 550 |
| ENST00000301843 | CTTN | chr11 | 70282681 | - | ENST00000307312 | CLASP2 | chr3 | 33602368 | - | 7314 | 3272 | 206 | 1858 | 550 |
| ENST00000301843 | CTTN | chr11 | 70282681 | - | ENST00000480013 | CLASP2 | chr3 | 33602368 | - | 6570 | 3272 | 206 | 1858 | 550 |
| ENST00000301843 | CTTN | chr11 | 70282681 | - | ENST00000461133 | CLASP2 | chr3 | 33602368 | - | 5808 | 3272 | 206 | 1858 | 550 |
| ENST00000376561 | CTTN | chr11 | 70282681 | - | ENST00000468888 | CLASP2 | chr3 | 33602368 | - | 6293 | 2247 | 171 | 2075 | 634 |
| ENST00000376561 | CTTN | chr11 | 70282681 | - | ENST00000399362 | CLASP2 | chr3 | 33602368 | - | 6293 | 2247 | 171 | 2075 | 634 |
| ENST00000376561 | CTTN | chr11 | 70282681 | - | ENST00000539981 | CLASP2 | chr3 | 33602368 | - | 6289 | 2247 | 171 | 2075 | 634 |
| ENST00000376561 | CTTN | chr11 | 70282681 | - | ENST00000359576 | CLASP2 | chr3 | 33602368 | - | 6289 | 2247 | 171 | 2075 | 634 |
| ENST00000376561 | CTTN | chr11 | 70282681 | - | ENST00000307312 | CLASP2 | chr3 | 33602368 | - | 6289 | 2247 | 171 | 2075 | 634 |
| ENST00000376561 | CTTN | chr11 | 70282681 | - | ENST00000480013 | CLASP2 | chr3 | 33602368 | - | 5545 | 2247 | 171 | 2075 | 634 |
| ENST00000376561 | CTTN | chr11 | 70282681 | - | ENST00000461133 | CLASP2 | chr3 | 33602368 | - | 4783 | 2247 | 171 | 2075 | 634 |
| DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
| ENST00000301843 | ENST00000468888 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - | 0.000220951 | 0.99977905 |
| ENST00000301843 | ENST00000399362 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - | 0.000220951 | 0.99977905 |
| ENST00000301843 | ENST00000539981 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - | 0.000222601 | 0.9997774 |
| ENST00000301843 | ENST00000359576 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - | 0.000222601 | 0.9997774 |
| ENST00000301843 | ENST00000307312 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - | 0.000222601 | 0.9997774 |
| ENST00000301843 | ENST00000480013 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - | 0.000306201 | 0.9996939 |
| ENST00000301843 | ENST00000461133 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - | 0.000457729 | 0.99954236 |
| ENST00000376561 | ENST00000468888 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - | 0.000322487 | 0.99967754 |
| ENST00000376561 | ENST00000399362 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - | 0.000322487 | 0.99967754 |
| ENST00000376561 | ENST00000539981 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - | 0.000323801 | 0.9996762 |
| ENST00000376561 | ENST00000359576 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - | 0.000323801 | 0.9996762 |
| ENST00000376561 | ENST00000307312 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - | 0.000323801 | 0.9996762 |
| ENST00000376561 | ENST00000480013 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - | 0.000449117 | 0.9995509 |
| ENST00000376561 | ENST00000461133 | CTTN | chr11 | 70282681 | - | CLASP2 | chr3 | 33602368 | - | 0.000727869 | 0.99927217 |
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Fusion Genomic Features for CTTN-CLASP2 |
| FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
| Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for CTTN-CLASP2 |
| Go to FGviewer for the breakpoints of chr11:70282681-chr3:33602368 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
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| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| CTTN | CLASP2 |
| FUNCTION: Contributes to the organization of the actin cytoskeleton and cell shape (PubMed:21296879). Plays a role in the formation of lamellipodia and in cell migration. Plays a role in the regulation of neuron morphology, axon growth and formation of neuronal growth cones (By similarity). Through its interaction with CTTNBP2, involved in the regulation of neuronal spine density (By similarity). Plays a role in the invasiveness of cancer cells, and the formation of metastases (PubMed:16636290). Plays a role in focal adhesion assembly and turnover (By similarity). In complex with ABL1 and MYLK regulates cortical actin-based cytoskeletal rearrangement critical to sphingosine 1-phosphate (S1P)-mediated endothelial cell (EC) barrier enhancement (PubMed:20861316). Plays a role in intracellular protein transport and endocytosis, and in modulating the levels of potassium channels present at the cell membrane (PubMed:17959782). Plays a role in receptor-mediated endocytosis via clathrin-coated pits (By similarity). Required for stabilization of KCNH1 channels at the cell membrane (PubMed:23144454). {ECO:0000250|UniProtKB:Q60598, ECO:0000250|UniProtKB:Q66HL2, ECO:0000269|PubMed:16636290, ECO:0000269|PubMed:17959782, ECO:0000269|PubMed:21296879, ECO:0000269|PubMed:23144454}. | FUNCTION: Microtubule plus-end tracking protein that promotes the stabilization of dynamic microtubules (PubMed:26003921). Involved in the nucleation of noncentrosomal microtubules originating from the trans-Golgi network (TGN). Required for the polarization of the cytoplasmic microtubule arrays in migrating cells towards the leading edge of the cell. May act at the cell cortex to enhance the frequency of rescue of depolymerizing microtubules by attaching their plus-ends to cortical platforms composed of ERC1 and PHLDB2 (PubMed:16824950). This cortical microtubule stabilizing activity is regulated at least in part by phosphatidylinositol 3-kinase signaling. Also performs a similar stabilizing function at the kinetochore which is essential for the bipolar alignment of chromosomes on the mitotic spindle (PubMed:16866869, PubMed:16914514). Acts as a mediator of ERBB2-dependent stabilization of microtubules at the cell cortex. {ECO:0000269|PubMed:11290329, ECO:0000269|PubMed:15631994, ECO:0000269|PubMed:16824950, ECO:0000269|PubMed:16866869, ECO:0000269|PubMed:16914514, ECO:0000269|PubMed:17543864, ECO:0000269|PubMed:20937854, ECO:0000269|PubMed:26003921}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | CTTN | chr11:70282681 | chr3:33602368 | ENST00000301843 | - | 18 | 18 | 348_401 | 1022.0 | 551.0 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | CTTN | chr11:70282681 | chr3:33602368 | ENST00000376561 | - | 19 | 19 | 348_401 | 692.0 | 635.0 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | CTTN | chr11:70282681 | chr3:33602368 | ENST00000301843 | - | 18 | 18 | 492_550 | 1022.0 | 551.0 | Domain | SH3 |
| Hgene | CTTN | chr11:70282681 | chr3:33602368 | ENST00000376561 | - | 19 | 19 | 492_550 | 692.0 | 635.0 | Domain | SH3 |
| Hgene | CTTN | chr11:70282681 | chr3:33602368 | ENST00000301843 | - | 18 | 18 | 117_153 | 1022.0 | 551.0 | Repeat | Note=Cortactin 2 |
| Hgene | CTTN | chr11:70282681 | chr3:33602368 | ENST00000301843 | - | 18 | 18 | 154_190 | 1022.0 | 551.0 | Repeat | Note=Cortactin 3 |
| Hgene | CTTN | chr11:70282681 | chr3:33602368 | ENST00000301843 | - | 18 | 18 | 191_227 | 1022.0 | 551.0 | Repeat | Note=Cortactin 4 |
| Hgene | CTTN | chr11:70282681 | chr3:33602368 | ENST00000301843 | - | 18 | 18 | 228_264 | 1022.0 | 551.0 | Repeat | Note=Cortactin 5 |
| Hgene | CTTN | chr11:70282681 | chr3:33602368 | ENST00000301843 | - | 18 | 18 | 265_301 | 1022.0 | 551.0 | Repeat | Note=Cortactin 6 |
| Hgene | CTTN | chr11:70282681 | chr3:33602368 | ENST00000301843 | - | 18 | 18 | 302_324 | 1022.0 | 551.0 | Repeat | Note=Cortactin 7%3B truncated |
| Hgene | CTTN | chr11:70282681 | chr3:33602368 | ENST00000301843 | - | 18 | 18 | 80_116 | 1022.0 | 551.0 | Repeat | Note=Cortactin 1 |
| Hgene | CTTN | chr11:70282681 | chr3:33602368 | ENST00000376561 | - | 19 | 19 | 117_153 | 692.0 | 635.0 | Repeat | Note=Cortactin 2 |
| Hgene | CTTN | chr11:70282681 | chr3:33602368 | ENST00000376561 | - | 19 | 19 | 154_190 | 692.0 | 635.0 | Repeat | Note=Cortactin 3 |
| Hgene | CTTN | chr11:70282681 | chr3:33602368 | ENST00000376561 | - | 19 | 19 | 191_227 | 692.0 | 635.0 | Repeat | Note=Cortactin 4 |
| Hgene | CTTN | chr11:70282681 | chr3:33602368 | ENST00000376561 | - | 19 | 19 | 228_264 | 692.0 | 635.0 | Repeat | Note=Cortactin 5 |
| Hgene | CTTN | chr11:70282681 | chr3:33602368 | ENST00000376561 | - | 19 | 19 | 265_301 | 692.0 | 635.0 | Repeat | Note=Cortactin 6 |
| Hgene | CTTN | chr11:70282681 | chr3:33602368 | ENST00000376561 | - | 19 | 19 | 302_324 | 692.0 | 635.0 | Repeat | Note=Cortactin 7%3B truncated |
| Hgene | CTTN | chr11:70282681 | chr3:33602368 | ENST00000376561 | - | 19 | 19 | 80_116 | 692.0 | 635.0 | Repeat | Note=Cortactin 1 |
| Tgene | CLASP2 | chr11:70282681 | chr3:33602368 | ENST00000313350 | 0 | 13 | 1104_1108 | 0 | 432.0 | Compositional bias | Note=Poly-Leu | |
| Tgene | CLASP2 | chr11:70282681 | chr3:33602368 | ENST00000313350 | 0 | 13 | 310_587 | 0 | 432.0 | Compositional bias | Note=Ser-rich | |
| Tgene | CLASP2 | chr11:70282681 | chr3:33602368 | ENST00000313350 | 0 | 13 | 1017_1294 | 0 | 432.0 | Region | Note=Required for cortical localization | |
| Tgene | CLASP2 | chr11:70282681 | chr3:33602368 | ENST00000313350 | 0 | 13 | 60_311 | 0 | 432.0 | Region | TOG 1 | |
| Tgene | CLASP2 | chr11:70282681 | chr3:33602368 | ENST00000313350 | 0 | 13 | 649_881 | 0 | 432.0 | Region | TOG 2 | |
| Tgene | CLASP2 | chr11:70282681 | chr3:33602368 | ENST00000313350 | 0 | 13 | 1054_1091 | 0 | 432.0 | Repeat | HEAT 6 | |
| Tgene | CLASP2 | chr11:70282681 | chr3:33602368 | ENST00000313350 | 0 | 13 | 1098_1135 | 0 | 432.0 | Repeat | HEAT 7 | |
| Tgene | CLASP2 | chr11:70282681 | chr3:33602368 | ENST00000313350 | 0 | 13 | 1216_1253 | 0 | 432.0 | Repeat | HEAT 8 | |
| Tgene | CLASP2 | chr11:70282681 | chr3:33602368 | ENST00000313350 | 0 | 13 | 173_208 | 0 | 432.0 | Repeat | HEAT 1 | |
| Tgene | CLASP2 | chr11:70282681 | chr3:33602368 | ENST00000313350 | 0 | 13 | 209_245 | 0 | 432.0 | Repeat | HEAT 2 | |
| Tgene | CLASP2 | chr11:70282681 | chr3:33602368 | ENST00000313350 | 0 | 13 | 250_287 | 0 | 432.0 | Repeat | HEAT 3 | |
| Tgene | CLASP2 | chr11:70282681 | chr3:33602368 | ENST00000313350 | 0 | 13 | 710_747 | 0 | 432.0 | Repeat | HEAT 4 | |
| Tgene | CLASP2 | chr11:70282681 | chr3:33602368 | ENST00000313350 | 0 | 13 | 772_809 | 0 | 432.0 | Repeat | HEAT 5 |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | CTTN | chr11:70282681 | chr3:33602368 | ENST00000346329 | - | 1 | 17 | 348_401 | 0 | 514.0 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | CTTN | chr11:70282681 | chr3:33602368 | ENST00000346329 | - | 1 | 17 | 492_550 | 0 | 514.0 | Domain | SH3 |
| Hgene | CTTN | chr11:70282681 | chr3:33602368 | ENST00000346329 | - | 1 | 17 | 117_153 | 0 | 514.0 | Repeat | Note=Cortactin 2 |
| Hgene | CTTN | chr11:70282681 | chr3:33602368 | ENST00000346329 | - | 1 | 17 | 154_190 | 0 | 514.0 | Repeat | Note=Cortactin 3 |
| Hgene | CTTN | chr11:70282681 | chr3:33602368 | ENST00000346329 | - | 1 | 17 | 191_227 | 0 | 514.0 | Repeat | Note=Cortactin 4 |
| Hgene | CTTN | chr11:70282681 | chr3:33602368 | ENST00000346329 | - | 1 | 17 | 228_264 | 0 | 514.0 | Repeat | Note=Cortactin 5 |
| Hgene | CTTN | chr11:70282681 | chr3:33602368 | ENST00000346329 | - | 1 | 17 | 265_301 | 0 | 514.0 | Repeat | Note=Cortactin 6 |
| Hgene | CTTN | chr11:70282681 | chr3:33602368 | ENST00000346329 | - | 1 | 17 | 302_324 | 0 | 514.0 | Repeat | Note=Cortactin 7%3B truncated |
| Hgene | CTTN | chr11:70282681 | chr3:33602368 | ENST00000346329 | - | 1 | 17 | 80_116 | 0 | 514.0 | Repeat | Note=Cortactin 1 |
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Fusion Gene Sequence for CTTN-CLASP2 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
| >In-frame_ENST00000301843_ENST00000468888_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(transcript)=7318nt_BP=3272nt GATGCGGCCCCGCCCCCGCCCTCGGAACCGGAAGTAGAGCCTGGTGCCTGGGAGCGGCTGGCGCGGCGGAATCCAGGGCCGACCCGGGCC GGACCGACCCCAGGCGGCGACGGAATCAGTCCCCAATGCCTGGAAATTCCTCATTGGATTACTGTGTTTTAAACAGAATTTCGTGAACAG CCTTTTATCTCCAAGCGGAAAGAAAGATGTGGAAAGCTTCAGCAGGCCACGCTGTGTCCATCGCCCAGGATGACGCGGGGGCCGATGACT GGGAGACCGACCCTGATTTTGTGAATGATGTGAGTGAGAAGGAGCAAAGATGGGGTGCCAAGACGGTGCAGGGCTCCGGGCACCAGGAGC ATATCAACATACACAAGCTGAGGGAGAATGTCTTTCAAGAGCATCAGACCCTTAAGGAGAAGGAACTTGAAACAGGACCAAAAGCTTCCC ATGGCTATGGAGGGAAATTTGGTGTGGAACAAGACCGAATGGATAAGTCAGCTGTCGGCCACGAATATCAGTCGAAACTTTCCAAGCACT GCTCGCAGGTGGACTCGGTCCGTGGCTTCGGAGGCAAGTTTGGTGTCCAGATGGACAGAGTTGATCAGTCTGCTGTAGGCTTTGAATACC AGGGGAAGACTGAGAAGCATGCCTCCCAGAAAGACTACTCCAGTGGTTTTGGCGGCAAGTATGGCGTGCAGGCCGACCGAGTAGACAAGA GCGCGGTGGGCTTCGACTACCAGGGCAAGACGGAGAAGCACGAGTCACAGAGAGATTACTCCAAAGGTTTCGGCGGCAAATACGGTATCG ACAAGGACAAAGTGGATAAGAGCGCCGTTGGCTTTGAGTATCAAGGCAAAACGGAGAAGCACGAGTCCCAGAAAGACTATGTGAAAGGGT TTGGAGGAAAATTTGGTGTGCAGACAGACAGACAAGACAAATGTGCCCTTGGCTGGGATCACCAGGAGAAATTGCAGCTGCATGAATCCC AAAAAGATTATAAGACTGGTTTTGGAGGCAAATTCGGTGTTCAGTCGGAGAGGCAGGACTCCGCTGCTGTGGGGTTTGATTACAAGGAGA AGCTGGCCAAGCACGAGTCCCAGCAAGACTACTCCAAAGGATTCGGCGGGAAGTATGGGGTGCAGAAGGATCGGATGGATAAGAATGCGT CAACCTTTGAGGATGTCACCCAGGTGTCCTCTGCCTACCAGAAGACAGTACCTGTCGAAGCTGTGACCAGCAAAACAAGTAACATCAGAG CTAACTTTGAAAACCTCGCTAAGGAGAAAGAGCAGGAGGACAGGCGGAAGGCGGAGGCGGAGAGAGCCCAGCGGATGGCCAAGGAGCGGC AGGAGCAGGAAGAGGCCAGGAGGAAGCTGGAGGAGCAAGCCAGAGCCAAAACGCAAACGCCCCCTGTGTCGCCCGCACCTCAGCCAACCG AGGAGAGGCTGCCCTCGAGCCCCGTCTATGAGGATGCGGCTTCCTTCAAGGCAGAGCTGAGCTACAGAGGCCCTGTGAGTGGGACGGAGC CGGAGCCCGTGTACAGCATGGAGGCCGCTGACTACCGAGAGGCCAGCAGCCAGCAGGGCCTGGCCTATGCCACAGAGGCTGTCTATGAAA GCGCAGAGGCCCCGGGCCACTATCCCGCAGAGGACAGCACCTACGATGAGTACGAGAACGATCTGGGGATCACAGCCGTCGCCCTGTACG ACTACCAGGCTGCGGGCGATGATGAGATCTCATTTGACCCTGATGACATCATCACCAACATCGAGATGATTGACGACGGCTGGTGGCGCG GGGTGTGCAAGGGCCGGTACGGGCTCTTCCCAGCCAACTATGTGGAGCTGCGGCAGTAGGGCCCCCAGCCCCCCCCCGGAGCTGCGCCCT GGATCCTCACACTACAGATCAGGCCTTCTTTGGTTCTTGGGTGGTTTTGGGTTTTTTCTGTTTTTTTTTTTTTTTTTTTTTTTTTGAAGG TGGGGAGGGGAATATACACATTGCTTTTATATTTAATACTTTTGCTGATGCTTTTGAAAATGTTTATGCCACAGAATTTGCTAATATATT GTAATCACATTCCTTAGGAGGACTTTGGTAATTGGTTTTATGCATTGATGGTTTTTTTTTTCTTTTTTGCCAAATTGACTGTCACGCGGC AGCTTCAGGGAGCTCGCATTCTCTTGTGTTCGTGTTGCCCTCGTGCCCATCAAGTGCAGTCGGGACCTCCCAGGACAAGCACGAGGCCTC AGGTCGGCCCTGTGGCGGGTAGGCAGGAAGGACTGTCCCAGACGAGGGGCTTCCTCTAGAGTCTCACTGCTGGGGAGGAGAGGACTGGGC CTGATGGAAGTTAACCCGGAGCTAAGTCACCCAGAGCACAGGAGCTGCCATGTCAGATGGGAAATCTGCCTATGTCATACCGTGACAGCC CGCAGGATCAGGTGACTTCTAGCAGAGACCCTGGTTTTTTTCCTGTGCCCACTCCGGCTTGTCCTCATCTCTACCCATCCCCTGATGCCC AGGTCACCGGGAGGGCTGCTGGGAGCCTCTCCTGTCCCCGCCGGGCAGTGTCACTGAGTCCTTGAAATCCTCCCCTGCCCCGCGGGTCTC TGGATTGGGACGCACAGTGCAGTTGAGGTCTGCGTCGGGCTTGGCTTTTCACAAAGGCTGATGTCTTAACTGTCACCCATATGGTCCCTG GGCCACCGGGCAGCCTGGGGCGGTGTGTGTGCCATGTCACAGCATGGCCTCTCGGCCTTGGGAAGGAAGGCAGTGCCTGCTCTGCTGTGA GCCGCCAGGAACCCTCCTCCTGTCAATGGGGGTGTAGTATTTTTGCCAAAATATCATGTTCAATTTCAGTAGTTTGATCAGTTGAAGGCT AGAAGTGTGAAGTGCAGATGAGTGTGTGTTCTTCCCCAAGGTCCCCCCACAGCTCCAGGACACCGCTGTCCTGGCATTTGTGGCCACTCA CTTTGTAGGAAACTCATCTCCTTCCTGAGGAGCCGGGAGGCTGGACCAGTCCCGTCGTGCAGTCAGGTGGGCGGTGTGTCTTTCCAGAAG GTCACGTGGAAATGTCTCGGGACTTGGGTCCCGGAGTGCCCGTGAAGCGTGTTTTTGCTCCTGAGGTGCATTTTCTCATCATCCTTGCTT TACCACAATGAGCAATGAGGTCGGGTTTTATATGCAACTTATTGTATCTGAATTCCTGTAGCACACCTCATAGGTATGATTTTTTTAAAT TAAAGAATTCAGAATAAACATTTTTTGATCCAATGAAGCTACTGAATCTTTACATCAAACGTGCACAAACAGGTTCTGGAGGAGCTGATC CCACTACTGATGTTTCTGGACAAAGTTAGTGAAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCA ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAGTTTTTTGTTTCGTTTCGTTTTGTATTTTCTGTA ACAGAGGACTATCCTCAGTCTGCATGTAACTTTTATGATAGTTATTCCAAATTCAAGAAGAAGCAGTATTAACATCAATTGATCGACACA AAGTAATTTTTAATTTAATTCATCATTTCACATGTTTGTACTTTGTCTTCCCATTAACCTTTGCCAGTGTTATGATTGTATAAATTTTTT TAAATGCTGGTTAAACAGGAATGCTTAAAGCTTTAAAAGTTTAACAGTCTAAAACATTTTTGCTTTTATTCAACTGCAGAATAATATTTT TATTGCTACTTTGAGTTTTGTTTCGTATCATGTCCTATGCTAGAAATATTTAAATGATGTGAAACAAAGCAGGACTAATTTGAACTACAG CTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGGGGTGATCTATAGTTTGAAAACTAAAACCTCAAAGACA GATGTTACAGAATCAGCCAGTTCTGTAAAACTGATATTGTCTATTGGTTATTGATCTTGCCATCTTTATTTAAAACCATGTCCCTTCTAT GATCCCTTAAGAAAGCTGCACCAAATCATCTGCCTGTTTTTTCTTGATACTTACTGAAATAGAAGGTTTTATTGCAGGGTTTATTTTGGT TTGTTTATATCTTTGTTGTGAATGATGCTTTTTTGTATTTATTAATATCAAATTCACTTATGAATAAACTTGATAATGGAAACGGACAAA AAAAATCAAGTGCGTGTGTGTCCTTGACCGTCTTCTGTTTCTCACGTAATAAACAAATTATCGAGACATGGGAGTGACCAGCACCTTTTC TTTAAATGGTGGAACCTGGTTTCCTTTTACCATGAAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGGCT GTCTTTGTATAATGGGCTCAAATTCTCTACCTCTTCAGGGCTAATACTTTTAACTGAGCTGCTGCCTATAGTGTCTTTTGGAAAACTACT TAAAGGGTGATTTTCTGTTACTTTTTAGCAAATTTTTTTAATCACCTCTTGCTACACCCATTCTTTTCATGTGCAGCCGACTCAAAAATT ACCAGTTTTGGTGAAAGGCTAAATTAGATAATTTGGAACCAGGATACTAATGATTTCTCATCTTTACTTTTTTTTAATCCTAATATAAAG TGAATTTGATTGAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTGTACTTTGTTTAACTGAAAAAAATGT AGAAATATATGTAAAGAATTTAAGACAAGAGTACTGAATGGATGATTTGTCATAGGCTTTCCCCTTTCTTTCTGTTCTAGCAGCAGGAAA AGTTTCTCTATATCCTCTCCCTCTACCTGTAACAATTTTGTTTTCTACTGTTAATTACATTGTGTATTTATAGTTCTATGCTTACTGTTG TGCATATACTGGCAATAAAACTGTACATAACATTACTTGAAAAAGTTAATAATGTATATCAGTTTTTCTGTCTCACTGTGTAACAAGTCA CTCAGTTTTATTTTAACTTTAGACGGTCTTGTATCAGTGGTGGTCTCTTGAATTTTGTAAGTTCATCTGAGGAGAAAAGATTTTTCAGGT GTAGCTACCACAATCAAAGGTATATAGCTACATACGCATGTATATATTACAGCTTATCTGTAAGAAGAAAATGCATTTTAAACACAACTC TTCTCAGTAGCATTTTATGACCTTTGGATATGTTTGTAATCATTTCGAATCAAAATATTGATTTAATTTTGACCTCTGGTTTAAGATACT GCTTTAACTACTGTTGACAACCAAGTAGAGTGACTTAAGCTGAACAGTAACTAACTGGAAAATTAGATAAGCACCTGGCATCTAATGGCA GGCAGGCACTCAAGAAATGAATTAACTACATAATGGAAAAGTATGGTTTAATGTGTCCAAATGAAAGCTAGTAGATGTAAACATGGAAAA ATTGTGTTTACAATTTTATAATCTCAGTTGATAAGACTATAAGAAAGCTGATTATTTAAATCACTATATACAATACACCCTTAATTTGTT CATTCCAGAAACATACTGAGATGTCAGCTACTTAAAAATGGTCACAAAAAGCTACTGTTTATATTTTTCCTCCTGCTATTCTCTCCCAAA TTAATTATTAATAAGTGTTGTTCATTTACTGCACTGCTGAGAACTAATTAAAATTATATATTCCAGATTGTAAAAGGTTATGATAATTCA GAGAGCAGTGTTCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTTCATGCGGTAATTGGTGATGAACTAAAACCACATCTCAGTCAACTT ACTGGCAGTAAAGTGGTGAGATCTGCTGAGGAAGCGGCATCAGTGTTGGCCACTTCAATTAGTCCAGAGCAGTGCATCAAAGTGCTTTGT CCTATCATTCAAACTGCAGACTACCCAATTAATCTGGCTGCAATCAAAATGCAAACAAAAGTGATAGAGAGAGTGTCCAAGGAAACCCTA AACCTGCTTTTGCCAGAGATTATGCCAGGTCTAATACAGCCTACAATCAGGGCTTTGGCATTAAAGGTTTTAAGAGAAATCCTAAGGCAT CAACCAGCAAGATTTAAAAACTATGCAGAATTGACTGTCATGAAAACATTGGAAGCACATAAAGATCCTCATAAGGAGATCTTTCCCTAG ATCATTCTGACCTAGTTGCAGAGTTGTTGAAGGAGCTGTCTAACCATAATGAGCGTGTAGAAGAAAGAAAAATTGCCCTCTATGAACTTA TGAAACTGACACAGGAAGAATCTTTTAGTGTTTGGGATGAACACTTCAAAACAATATTGCTTTTATTGCTTGAAACGCTTGGAGATAAAG AGATGTGTGGTGGTCCTGGGATGTCTGACCCAAGAGCAGGAGGTGATGCTACTGACTCAAGTCAAACAGCTCTTGATAATAAAGCTTCAT TGCTCCATTCAATGCCTACTCACTCCTCTCCACGCTCTCGAGACTATAATCCATATAACTATTCAGATAGCATCAGTCCCTTCAACAAGT CTGCCCTCAAGGAAGCCATGTTTGATGATGATGCTGACCAGTTTCCTGACGTGCATTTGATTATGACACAGAAAATATGAACTCTGAAGA TATTTATAGCTCTCTTAGAGGTGTCACTGAAGCAATCCAGAATTTCAGCTTCCGTAGCCAAGAAGATATGAATGAGCCATTGAAAAGGGA TTCTAAAAAAGATGATGGCGATTCAAGTTCCATGGGGAGTCCTTTGACAAGACCAACACCACGATCACCAGCTAACTGGTCCAGTCCTCT TACTTCTCCTACCAATACATCACAGAATACTTTATCTCCAAGGCAGCACAGTCAGTGCTGATTTCATTATTTGAACTCAATACCCCAGAG TTTACAATGTTATTAGGAGCTTTACCAAAAACTTTTCAGGATGGTGCTACCAAGCTTCTTCATAATCACCTTCGAAACACTGGCAATGGA ACCCAGGTGAAGGTTGCTATCCTTAAATACATAGAAACTCTGGCCAAACAGATGGATCCAGGAGATTTTATAAATTCCAGTGAAACTCGC CTAGCAGTGTCTCGGGTCATCACTTGGACAACAGAACCCAAAAGTTCTGATGTTCGGAAGAGAGTCTTTTCCAAATGATCTTCAGTTCAA TATTCTAATGAGATTTACAGTTGATCAGACCCAGACACCAAGCTTAAAGAAAAAAAATGGGTGCTGATTTGCTTGGATCTGTTCAGGCAA >In-frame_ENST00000301843_ENST00000468888_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(amino acids)=550AA_start in transcript=206_stop in transcript=1858 MWKASAGHAVSIAQDDAGADDWETDPDFVNDVSEKEQRWGAKTVQGSGHQEHINIHKLRENVFQEHQTLKEKELETGPKASHGYGGKFGV EQDRMDKSAVGHEYQSKLSKHCSQVDSVRGFGGKFGVQMDRVDQSAVGFEYQGKTEKHASQKDYSSGFGGKYGVQADRVDKSAVGFDYQG KTEKHESQRDYSKGFGGKYGIDKDKVDKSAVGFEYQGKTEKHESQKDYVKGFGGKFGVQTDRQDKCALGWDHQEKLQLHESQKDYKTGFG GKFGVQSERQDSAAVGFDYKEKLAKHESQQDYSKGFGGKYGVQKDRMDKNASTFEDVTQVSSAYQKTVPVEAVTSKTSNIRANFENLAKE KEQEDRRKAEAERAQRMAKERQEQEEARRKLEEQARAKTQTPPVSPAPQPTEERLPSSPVYEDAASFKAELSYRGPVSGTEPEPVYSMEA ADYREASSQQGLAYATEAVYESAEAPGHYPAEDSTYDEYENDLGITAVALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGVCKGRYGL -------------------------------------------------------------- >In-frame_ENST00000301843_ENST00000399362_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(transcript)=7318nt_BP=3272nt GATGCGGCCCCGCCCCCGCCCTCGGAACCGGAAGTAGAGCCTGGTGCCTGGGAGCGGCTGGCGCGGCGGAATCCAGGGCCGACCCGGGCC GGACCGACCCCAGGCGGCGACGGAATCAGTCCCCAATGCCTGGAAATTCCTCATTGGATTACTGTGTTTTAAACAGAATTTCGTGAACAG CCTTTTATCTCCAAGCGGAAAGAAAGATGTGGAAAGCTTCAGCAGGCCACGCTGTGTCCATCGCCCAGGATGACGCGGGGGCCGATGACT GGGAGACCGACCCTGATTTTGTGAATGATGTGAGTGAGAAGGAGCAAAGATGGGGTGCCAAGACGGTGCAGGGCTCCGGGCACCAGGAGC ATATCAACATACACAAGCTGAGGGAGAATGTCTTTCAAGAGCATCAGACCCTTAAGGAGAAGGAACTTGAAACAGGACCAAAAGCTTCCC ATGGCTATGGAGGGAAATTTGGTGTGGAACAAGACCGAATGGATAAGTCAGCTGTCGGCCACGAATATCAGTCGAAACTTTCCAAGCACT GCTCGCAGGTGGACTCGGTCCGTGGCTTCGGAGGCAAGTTTGGTGTCCAGATGGACAGAGTTGATCAGTCTGCTGTAGGCTTTGAATACC AGGGGAAGACTGAGAAGCATGCCTCCCAGAAAGACTACTCCAGTGGTTTTGGCGGCAAGTATGGCGTGCAGGCCGACCGAGTAGACAAGA GCGCGGTGGGCTTCGACTACCAGGGCAAGACGGAGAAGCACGAGTCACAGAGAGATTACTCCAAAGGTTTCGGCGGCAAATACGGTATCG ACAAGGACAAAGTGGATAAGAGCGCCGTTGGCTTTGAGTATCAAGGCAAAACGGAGAAGCACGAGTCCCAGAAAGACTATGTGAAAGGGT TTGGAGGAAAATTTGGTGTGCAGACAGACAGACAAGACAAATGTGCCCTTGGCTGGGATCACCAGGAGAAATTGCAGCTGCATGAATCCC AAAAAGATTATAAGACTGGTTTTGGAGGCAAATTCGGTGTTCAGTCGGAGAGGCAGGACTCCGCTGCTGTGGGGTTTGATTACAAGGAGA AGCTGGCCAAGCACGAGTCCCAGCAAGACTACTCCAAAGGATTCGGCGGGAAGTATGGGGTGCAGAAGGATCGGATGGATAAGAATGCGT CAACCTTTGAGGATGTCACCCAGGTGTCCTCTGCCTACCAGAAGACAGTACCTGTCGAAGCTGTGACCAGCAAAACAAGTAACATCAGAG CTAACTTTGAAAACCTCGCTAAGGAGAAAGAGCAGGAGGACAGGCGGAAGGCGGAGGCGGAGAGAGCCCAGCGGATGGCCAAGGAGCGGC AGGAGCAGGAAGAGGCCAGGAGGAAGCTGGAGGAGCAAGCCAGAGCCAAAACGCAAACGCCCCCTGTGTCGCCCGCACCTCAGCCAACCG AGGAGAGGCTGCCCTCGAGCCCCGTCTATGAGGATGCGGCTTCCTTCAAGGCAGAGCTGAGCTACAGAGGCCCTGTGAGTGGGACGGAGC CGGAGCCCGTGTACAGCATGGAGGCCGCTGACTACCGAGAGGCCAGCAGCCAGCAGGGCCTGGCCTATGCCACAGAGGCTGTCTATGAAA GCGCAGAGGCCCCGGGCCACTATCCCGCAGAGGACAGCACCTACGATGAGTACGAGAACGATCTGGGGATCACAGCCGTCGCCCTGTACG ACTACCAGGCTGCGGGCGATGATGAGATCTCATTTGACCCTGATGACATCATCACCAACATCGAGATGATTGACGACGGCTGGTGGCGCG GGGTGTGCAAGGGCCGGTACGGGCTCTTCCCAGCCAACTATGTGGAGCTGCGGCAGTAGGGCCCCCAGCCCCCCCCCGGAGCTGCGCCCT GGATCCTCACACTACAGATCAGGCCTTCTTTGGTTCTTGGGTGGTTTTGGGTTTTTTCTGTTTTTTTTTTTTTTTTTTTTTTTTTGAAGG TGGGGAGGGGAATATACACATTGCTTTTATATTTAATACTTTTGCTGATGCTTTTGAAAATGTTTATGCCACAGAATTTGCTAATATATT GTAATCACATTCCTTAGGAGGACTTTGGTAATTGGTTTTATGCATTGATGGTTTTTTTTTTCTTTTTTGCCAAATTGACTGTCACGCGGC AGCTTCAGGGAGCTCGCATTCTCTTGTGTTCGTGTTGCCCTCGTGCCCATCAAGTGCAGTCGGGACCTCCCAGGACAAGCACGAGGCCTC AGGTCGGCCCTGTGGCGGGTAGGCAGGAAGGACTGTCCCAGACGAGGGGCTTCCTCTAGAGTCTCACTGCTGGGGAGGAGAGGACTGGGC CTGATGGAAGTTAACCCGGAGCTAAGTCACCCAGAGCACAGGAGCTGCCATGTCAGATGGGAAATCTGCCTATGTCATACCGTGACAGCC CGCAGGATCAGGTGACTTCTAGCAGAGACCCTGGTTTTTTTCCTGTGCCCACTCCGGCTTGTCCTCATCTCTACCCATCCCCTGATGCCC AGGTCACCGGGAGGGCTGCTGGGAGCCTCTCCTGTCCCCGCCGGGCAGTGTCACTGAGTCCTTGAAATCCTCCCCTGCCCCGCGGGTCTC TGGATTGGGACGCACAGTGCAGTTGAGGTCTGCGTCGGGCTTGGCTTTTCACAAAGGCTGATGTCTTAACTGTCACCCATATGGTCCCTG GGCCACCGGGCAGCCTGGGGCGGTGTGTGTGCCATGTCACAGCATGGCCTCTCGGCCTTGGGAAGGAAGGCAGTGCCTGCTCTGCTGTGA GCCGCCAGGAACCCTCCTCCTGTCAATGGGGGTGTAGTATTTTTGCCAAAATATCATGTTCAATTTCAGTAGTTTGATCAGTTGAAGGCT AGAAGTGTGAAGTGCAGATGAGTGTGTGTTCTTCCCCAAGGTCCCCCCACAGCTCCAGGACACCGCTGTCCTGGCATTTGTGGCCACTCA CTTTGTAGGAAACTCATCTCCTTCCTGAGGAGCCGGGAGGCTGGACCAGTCCCGTCGTGCAGTCAGGTGGGCGGTGTGTCTTTCCAGAAG GTCACGTGGAAATGTCTCGGGACTTGGGTCCCGGAGTGCCCGTGAAGCGTGTTTTTGCTCCTGAGGTGCATTTTCTCATCATCCTTGCTT TACCACAATGAGCAATGAGGTCGGGTTTTATATGCAACTTATTGTATCTGAATTCCTGTAGCACACCTCATAGGTATGATTTTTTTAAAT TAAAGAATTCAGAATAAACATTTTTTGATCCAATGAAGCTACTGAATCTTTACATCAAACGTGCACAAACAGGTTCTGGAGGAGCTGATC CCACTACTGATGTTTCTGGACAAAGTTAGTGAAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCA ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAGTTTTTTGTTTCGTTTCGTTTTGTATTTTCTGTA ACAGAGGACTATCCTCAGTCTGCATGTAACTTTTATGATAGTTATTCCAAATTCAAGAAGAAGCAGTATTAACATCAATTGATCGACACA AAGTAATTTTTAATTTAATTCATCATTTCACATGTTTGTACTTTGTCTTCCCATTAACCTTTGCCAGTGTTATGATTGTATAAATTTTTT TAAATGCTGGTTAAACAGGAATGCTTAAAGCTTTAAAAGTTTAACAGTCTAAAACATTTTTGCTTTTATTCAACTGCAGAATAATATTTT TATTGCTACTTTGAGTTTTGTTTCGTATCATGTCCTATGCTAGAAATATTTAAATGATGTGAAACAAAGCAGGACTAATTTGAACTACAG CTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGGGGTGATCTATAGTTTGAAAACTAAAACCTCAAAGACA GATGTTACAGAATCAGCCAGTTCTGTAAAACTGATATTGTCTATTGGTTATTGATCTTGCCATCTTTATTTAAAACCATGTCCCTTCTAT GATCCCTTAAGAAAGCTGCACCAAATCATCTGCCTGTTTTTTCTTGATACTTACTGAAATAGAAGGTTTTATTGCAGGGTTTATTTTGGT TTGTTTATATCTTTGTTGTGAATGATGCTTTTTTGTATTTATTAATATCAAATTCACTTATGAATAAACTTGATAATGGAAACGGACAAA AAAAATCAAGTGCGTGTGTGTCCTTGACCGTCTTCTGTTTCTCACGTAATAAACAAATTATCGAGACATGGGAGTGACCAGCACCTTTTC TTTAAATGGTGGAACCTGGTTTCCTTTTACCATGAAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGGCT GTCTTTGTATAATGGGCTCAAATTCTCTACCTCTTCAGGGCTAATACTTTTAACTGAGCTGCTGCCTATAGTGTCTTTTGGAAAACTACT TAAAGGGTGATTTTCTGTTACTTTTTAGCAAATTTTTTTAATCACCTCTTGCTACACCCATTCTTTTCATGTGCAGCCGACTCAAAAATT ACCAGTTTTGGTGAAAGGCTAAATTAGATAATTTGGAACCAGGATACTAATGATTTCTCATCTTTACTTTTTTTTAATCCTAATATAAAG TGAATTTGATTGAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTGTACTTTGTTTAACTGAAAAAAATGT AGAAATATATGTAAAGAATTTAAGACAAGAGTACTGAATGGATGATTTGTCATAGGCTTTCCCCTTTCTTTCTGTTCTAGCAGCAGGAAA AGTTTCTCTATATCCTCTCCCTCTACCTGTAACAATTTTGTTTTCTACTGTTAATTACATTGTGTATTTATAGTTCTATGCTTACTGTTG TGCATATACTGGCAATAAAACTGTACATAACATTACTTGAAAAAGTTAATAATGTATATCAGTTTTTCTGTCTCACTGTGTAACAAGTCA CTCAGTTTTATTTTAACTTTAGACGGTCTTGTATCAGTGGTGGTCTCTTGAATTTTGTAAGTTCATCTGAGGAGAAAAGATTTTTCAGGT GTAGCTACCACAATCAAAGGTATATAGCTACATACGCATGTATATATTACAGCTTATCTGTAAGAAGAAAATGCATTTTAAACACAACTC TTCTCAGTAGCATTTTATGACCTTTGGATATGTTTGTAATCATTTCGAATCAAAATATTGATTTAATTTTGACCTCTGGTTTAAGATACT GCTTTAACTACTGTTGACAACCAAGTAGAGTGACTTAAGCTGAACAGTAACTAACTGGAAAATTAGATAAGCACCTGGCATCTAATGGCA GGCAGGCACTCAAGAAATGAATTAACTACATAATGGAAAAGTATGGTTTAATGTGTCCAAATGAAAGCTAGTAGATGTAAACATGGAAAA ATTGTGTTTACAATTTTATAATCTCAGTTGATAAGACTATAAGAAAGCTGATTATTTAAATCACTATATACAATACACCCTTAATTTGTT CATTCCAGAAACATACTGAGATGTCAGCTACTTAAAAATGGTCACAAAAAGCTACTGTTTATATTTTTCCTCCTGCTATTCTCTCCCAAA TTAATTATTAATAAGTGTTGTTCATTTACTGCACTGCTGAGAACTAATTAAAATTATATATTCCAGATTGTAAAAGGTTATGATAATTCA GAGAGCAGTGTTCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTTCATGCGGTAATTGGTGATGAACTAAAACCACATCTCAGTCAACTT ACTGGCAGTAAAGTGGTGAGATCTGCTGAGGAAGCGGCATCAGTGTTGGCCACTTCAATTAGTCCAGAGCAGTGCATCAAAGTGCTTTGT CCTATCATTCAAACTGCAGACTACCCAATTAATCTGGCTGCAATCAAAATGCAAACAAAAGTGATAGAGAGAGTGTCCAAGGAAACCCTA AACCTGCTTTTGCCAGAGATTATGCCAGGTCTAATACAGCCTACAATCAGGGCTTTGGCATTAAAGGTTTTAAGAGAAATCCTAAGGCAT CAACCAGCAAGATTTAAAAACTATGCAGAATTGACTGTCATGAAAACATTGGAAGCACATAAAGATCCTCATAAGGAGATCTTTCCCTAG ATCATTCTGACCTAGTTGCAGAGTTGTTGAAGGAGCTGTCTAACCATAATGAGCGTGTAGAAGAAAGAAAAATTGCCCTCTATGAACTTA TGAAACTGACACAGGAAGAATCTTTTAGTGTTTGGGATGAACACTTCAAAACAATATTGCTTTTATTGCTTGAAACGCTTGGAGATAAAG AGATGTGTGGTGGTCCTGGGATGTCTGACCCAAGAGCAGGAGGTGATGCTACTGACTCAAGTCAAACAGCTCTTGATAATAAAGCTTCAT TGCTCCATTCAATGCCTACTCACTCCTCTCCACGCTCTCGAGACTATAATCCATATAACTATTCAGATAGCATCAGTCCCTTCAACAAGT CTGCCCTCAAGGAAGCCATGTTTGATGATGATGCTGACCAGTTTCCTGACGTGCATTTGATTATGACACAGAAAATATGAACTCTGAAGA TATTTATAGCTCTCTTAGAGGTGTCACTGAAGCAATCCAGAATTTCAGCTTCCGTAGCCAAGAAGATATGAATGAGCCATTGAAAAGGGA TTCTAAAAAAGATGATGGCGATTCAAGTTCCATGGGGAGTCCTTTGACAAGACCAACACCACGATCACCAGCTAACTGGTCCAGTCCTCT TACTTCTCCTACCAATACATCACAGAATACTTTATCTCCAAGGCAGCACAGTCAGTGCTGATTTCATTATTTGAACTCAATACCCCAGAG TTTACAATGTTATTAGGAGCTTTACCAAAAACTTTTCAGGATGGTGCTACCAAGCTTCTTCATAATCACCTTCGAAACACTGGCAATGGA ACCCAGGTGAAGGTTGCTATCCTTAAATACATAGAAACTCTGGCCAAACAGATGGATCCAGGAGATTTTATAAATTCCAGTGAAACTCGC CTAGCAGTGTCTCGGGTCATCACTTGGACAACAGAACCCAAAAGTTCTGATGTTCGGAAGAGAGTCTTTTCCAAATGATCTTCAGTTCAA TATTCTAATGAGATTTACAGTTGATCAGACCCAGACACCAAGCTTAAAGAAAAAAAATGGGTGCTGATTTGCTTGGATCTGTTCAGGCAA >In-frame_ENST00000301843_ENST00000399362_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(amino acids)=550AA_start in transcript=206_stop in transcript=1858 MWKASAGHAVSIAQDDAGADDWETDPDFVNDVSEKEQRWGAKTVQGSGHQEHINIHKLRENVFQEHQTLKEKELETGPKASHGYGGKFGV EQDRMDKSAVGHEYQSKLSKHCSQVDSVRGFGGKFGVQMDRVDQSAVGFEYQGKTEKHASQKDYSSGFGGKYGVQADRVDKSAVGFDYQG KTEKHESQRDYSKGFGGKYGIDKDKVDKSAVGFEYQGKTEKHESQKDYVKGFGGKFGVQTDRQDKCALGWDHQEKLQLHESQKDYKTGFG GKFGVQSERQDSAAVGFDYKEKLAKHESQQDYSKGFGGKYGVQKDRMDKNASTFEDVTQVSSAYQKTVPVEAVTSKTSNIRANFENLAKE KEQEDRRKAEAERAQRMAKERQEQEEARRKLEEQARAKTQTPPVSPAPQPTEERLPSSPVYEDAASFKAELSYRGPVSGTEPEPVYSMEA ADYREASSQQGLAYATEAVYESAEAPGHYPAEDSTYDEYENDLGITAVALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGVCKGRYGL -------------------------------------------------------------- >In-frame_ENST00000301843_ENST00000539981_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(transcript)=7314nt_BP=3272nt GATGCGGCCCCGCCCCCGCCCTCGGAACCGGAAGTAGAGCCTGGTGCCTGGGAGCGGCTGGCGCGGCGGAATCCAGGGCCGACCCGGGCC GGACCGACCCCAGGCGGCGACGGAATCAGTCCCCAATGCCTGGAAATTCCTCATTGGATTACTGTGTTTTAAACAGAATTTCGTGAACAG CCTTTTATCTCCAAGCGGAAAGAAAGATGTGGAAAGCTTCAGCAGGCCACGCTGTGTCCATCGCCCAGGATGACGCGGGGGCCGATGACT GGGAGACCGACCCTGATTTTGTGAATGATGTGAGTGAGAAGGAGCAAAGATGGGGTGCCAAGACGGTGCAGGGCTCCGGGCACCAGGAGC ATATCAACATACACAAGCTGAGGGAGAATGTCTTTCAAGAGCATCAGACCCTTAAGGAGAAGGAACTTGAAACAGGACCAAAAGCTTCCC ATGGCTATGGAGGGAAATTTGGTGTGGAACAAGACCGAATGGATAAGTCAGCTGTCGGCCACGAATATCAGTCGAAACTTTCCAAGCACT GCTCGCAGGTGGACTCGGTCCGTGGCTTCGGAGGCAAGTTTGGTGTCCAGATGGACAGAGTTGATCAGTCTGCTGTAGGCTTTGAATACC AGGGGAAGACTGAGAAGCATGCCTCCCAGAAAGACTACTCCAGTGGTTTTGGCGGCAAGTATGGCGTGCAGGCCGACCGAGTAGACAAGA GCGCGGTGGGCTTCGACTACCAGGGCAAGACGGAGAAGCACGAGTCACAGAGAGATTACTCCAAAGGTTTCGGCGGCAAATACGGTATCG ACAAGGACAAAGTGGATAAGAGCGCCGTTGGCTTTGAGTATCAAGGCAAAACGGAGAAGCACGAGTCCCAGAAAGACTATGTGAAAGGGT TTGGAGGAAAATTTGGTGTGCAGACAGACAGACAAGACAAATGTGCCCTTGGCTGGGATCACCAGGAGAAATTGCAGCTGCATGAATCCC AAAAAGATTATAAGACTGGTTTTGGAGGCAAATTCGGTGTTCAGTCGGAGAGGCAGGACTCCGCTGCTGTGGGGTTTGATTACAAGGAGA AGCTGGCCAAGCACGAGTCCCAGCAAGACTACTCCAAAGGATTCGGCGGGAAGTATGGGGTGCAGAAGGATCGGATGGATAAGAATGCGT CAACCTTTGAGGATGTCACCCAGGTGTCCTCTGCCTACCAGAAGACAGTACCTGTCGAAGCTGTGACCAGCAAAACAAGTAACATCAGAG CTAACTTTGAAAACCTCGCTAAGGAGAAAGAGCAGGAGGACAGGCGGAAGGCGGAGGCGGAGAGAGCCCAGCGGATGGCCAAGGAGCGGC AGGAGCAGGAAGAGGCCAGGAGGAAGCTGGAGGAGCAAGCCAGAGCCAAAACGCAAACGCCCCCTGTGTCGCCCGCACCTCAGCCAACCG AGGAGAGGCTGCCCTCGAGCCCCGTCTATGAGGATGCGGCTTCCTTCAAGGCAGAGCTGAGCTACAGAGGCCCTGTGAGTGGGACGGAGC CGGAGCCCGTGTACAGCATGGAGGCCGCTGACTACCGAGAGGCCAGCAGCCAGCAGGGCCTGGCCTATGCCACAGAGGCTGTCTATGAAA GCGCAGAGGCCCCGGGCCACTATCCCGCAGAGGACAGCACCTACGATGAGTACGAGAACGATCTGGGGATCACAGCCGTCGCCCTGTACG ACTACCAGGCTGCGGGCGATGATGAGATCTCATTTGACCCTGATGACATCATCACCAACATCGAGATGATTGACGACGGCTGGTGGCGCG GGGTGTGCAAGGGCCGGTACGGGCTCTTCCCAGCCAACTATGTGGAGCTGCGGCAGTAGGGCCCCCAGCCCCCCCCCGGAGCTGCGCCCT GGATCCTCACACTACAGATCAGGCCTTCTTTGGTTCTTGGGTGGTTTTGGGTTTTTTCTGTTTTTTTTTTTTTTTTTTTTTTTTTGAAGG TGGGGAGGGGAATATACACATTGCTTTTATATTTAATACTTTTGCTGATGCTTTTGAAAATGTTTATGCCACAGAATTTGCTAATATATT GTAATCACATTCCTTAGGAGGACTTTGGTAATTGGTTTTATGCATTGATGGTTTTTTTTTTCTTTTTTGCCAAATTGACTGTCACGCGGC AGCTTCAGGGAGCTCGCATTCTCTTGTGTTCGTGTTGCCCTCGTGCCCATCAAGTGCAGTCGGGACCTCCCAGGACAAGCACGAGGCCTC AGGTCGGCCCTGTGGCGGGTAGGCAGGAAGGACTGTCCCAGACGAGGGGCTTCCTCTAGAGTCTCACTGCTGGGGAGGAGAGGACTGGGC CTGATGGAAGTTAACCCGGAGCTAAGTCACCCAGAGCACAGGAGCTGCCATGTCAGATGGGAAATCTGCCTATGTCATACCGTGACAGCC CGCAGGATCAGGTGACTTCTAGCAGAGACCCTGGTTTTTTTCCTGTGCCCACTCCGGCTTGTCCTCATCTCTACCCATCCCCTGATGCCC AGGTCACCGGGAGGGCTGCTGGGAGCCTCTCCTGTCCCCGCCGGGCAGTGTCACTGAGTCCTTGAAATCCTCCCCTGCCCCGCGGGTCTC TGGATTGGGACGCACAGTGCAGTTGAGGTCTGCGTCGGGCTTGGCTTTTCACAAAGGCTGATGTCTTAACTGTCACCCATATGGTCCCTG GGCCACCGGGCAGCCTGGGGCGGTGTGTGTGCCATGTCACAGCATGGCCTCTCGGCCTTGGGAAGGAAGGCAGTGCCTGCTCTGCTGTGA GCCGCCAGGAACCCTCCTCCTGTCAATGGGGGTGTAGTATTTTTGCCAAAATATCATGTTCAATTTCAGTAGTTTGATCAGTTGAAGGCT AGAAGTGTGAAGTGCAGATGAGTGTGTGTTCTTCCCCAAGGTCCCCCCACAGCTCCAGGACACCGCTGTCCTGGCATTTGTGGCCACTCA CTTTGTAGGAAACTCATCTCCTTCCTGAGGAGCCGGGAGGCTGGACCAGTCCCGTCGTGCAGTCAGGTGGGCGGTGTGTCTTTCCAGAAG GTCACGTGGAAATGTCTCGGGACTTGGGTCCCGGAGTGCCCGTGAAGCGTGTTTTTGCTCCTGAGGTGCATTTTCTCATCATCCTTGCTT TACCACAATGAGCAATGAGGTCGGGTTTTATATGCAACTTATTGTATCTGAATTCCTGTAGCACACCTCATAGGTATGATTTTTTTAAAT TAAAGAATTCAGAATAAACATTTTTTGATCCAATGAAGCTACTGAATCTTTACATCAAACGTGCACAAACAGGTTCTGGAGGAGCTGATC CCACTACTGATGTTTCTGGACAAAGTTAGTGAAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCA ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAGTTTTTTGTTTCGTTTCGTTTTGTATTTTCTGTA ACAGAGGACTATCCTCAGTCTGCATGTAACTTTTATGATAGTTATTCCAAATTCAAGAAGAAGCAGTATTAACATCAATTGATCGACACA AAGTAATTTTTAATTTAATTCATCATTTCACATGTTTGTACTTTGTCTTCCCATTAACCTTTGCCAGTGTTATGATTGTATAAATTTTTT TAAATGCTGGTTAAACAGGAATGCTTAAAGCTTTAAAAGTTTAACAGTCTAAAACATTTTTGCTTTTATTCAACTGCAGAATAATATTTT TATTGCTACTTTGAGTTTTGTTTCGTATCATGTCCTATGCTAGAAATATTTAAATGATGTGAAACAAAGCAGGACTAATTTGAACTACAG CTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGGGGTGATCTATAGTTTGAAAACTAAAACCTCAAAGACA GATGTTACAGAATCAGCCAGTTCTGTAAAACTGATATTGTCTATTGGTTATTGATCTTGCCATCTTTATTTAAAACCATGTCCCTTCTAT GATCCCTTAAGAAAGCTGCACCAAATCATCTGCCTGTTTTTTCTTGATACTTACTGAAATAGAAGGTTTTATTGCAGGGTTTATTTTGGT TTGTTTATATCTTTGTTGTGAATGATGCTTTTTTGTATTTATTAATATCAAATTCACTTATGAATAAACTTGATAATGGAAACGGACAAA AAAAATCAAGTGCGTGTGTGTCCTTGACCGTCTTCTGTTTCTCACGTAATAAACAAATTATCGAGACATGGGAGTGACCAGCACCTTTTC TTTAAATGGTGGAACCTGGTTTCCTTTTACCATGAAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGGCT GTCTTTGTATAATGGGCTCAAATTCTCTACCTCTTCAGGGCTAATACTTTTAACTGAGCTGCTGCCTATAGTGTCTTTTGGAAAACTACT TAAAGGGTGATTTTCTGTTACTTTTTAGCAAATTTTTTTAATCACCTCTTGCTACACCCATTCTTTTCATGTGCAGCCGACTCAAAAATT ACCAGTTTTGGTGAAAGGCTAAATTAGATAATTTGGAACCAGGATACTAATGATTTCTCATCTTTACTTTTTTTTAATCCTAATATAAAG TGAATTTGATTGAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTGTACTTTGTTTAACTGAAAAAAATGT AGAAATATATGTAAAGAATTTAAGACAAGAGTACTGAATGGATGATTTGTCATAGGCTTTCCCCTTTCTTTCTGTTCTAGCAGCAGGAAA AGTTTCTCTATATCCTCTCCCTCTACCTGTAACAATTTTGTTTTCTACTGTTAATTACATTGTGTATTTATAGTTCTATGCTTACTGTTG TGCATATACTGGCAATAAAACTGTACATAACATTACTTGAAAAAGTTAATAATGTATATCAGTTTTTCTGTCTCACTGTGTAACAAGTCA CTCAGTTTTATTTTAACTTTAGACGGTCTTGTATCAGTGGTGGTCTCTTGAATTTTGTAAGTTCATCTGAGGAGAAAAGATTTTTCAGGT GTAGCTACCACAATCAAAGGTATATAGCTACATACGCATGTATATATTACAGCTTATCTGTAAGAAGAAAATGCATTTTAAACACAACTC TTCTCAGTAGCATTTTATGACCTTTGGATATGTTTGTAATCATTTCGAATCAAAATATTGATTTAATTTTGACCTCTGGTTTAAGATACT GCTTTAACTACTGTTGACAACCAAGTAGAGTGACTTAAGCTGAACAGTAACTAACTGGAAAATTAGATAAGCACCTGGCATCTAATGGCA GGCAGGCACTCAAGAAATGAATTAACTACATAATGGAAAAGTATGGTTTAATGTGTCCAAATGAAAGCTAGTAGATGTAAACATGGAAAA ATTGTGTTTACAATTTTATAATCTCAGTTGATAAGACTATAAGAAAGCTGATTATTTAAATCACTATATACAATACACCCTTAATTTGTT CATTCCAGAAACATACTGAGATGTCAGCTACTTAAAAATGGTCACAAAAAGCTACTGTTTATATTTTTCCTCCTGCTATTCTCTCCCAAA TTAATTATTAATAAGTGTTGTTCATTTACTGCACTGCTGAGAACTAATTAAAATTATATATTCCAGATTGTGGTTATGATAATTCAGAGA GCAGTGTTCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTTCATGCGGTAATTGGTGATGAACTAAAACCACATCTCAGTCAACTTACTG GCAGTAAAGTGGTGAGATCTGCTGAGGAAGCGGCATCAGTGTTGGCCACTTCAATTAGTCCAGAGCAGTGCATCAAAGTGCTTTGTCCTA TCATTCAAACTGCAGACTACCCAATTAATCTGGCTGCAATCAAAATGCAAACAAAAGTGATAGAGAGAGTGTCCAAGGAAACCCTAAACC TGCTTTTGCCAGAGATTATGCCAGGTCTAATACAGCCTACAATCAGGGCTTTGGCATTAAAGGTTTTAAGAGAAATCCTAAGGCATCAAC CAGCAAGATTTAAAAACTATGCAGAATTGACTGTCATGAAAACATTGGAAGCACATAAAGATCCTCATAAGGAGATCTTTCCCTAGATCA TTCTGACCTAGTTGCAGAGTTGTTGAAGGAGCTGTCTAACCATAATGAGCGTGTAGAAGAAAGAAAAATTGCCCTCTATGAACTTATGAA ACTGACACAGGAAGAATCTTTTAGTGTTTGGGATGAACACTTCAAAACAATATTGCTTTTATTGCTTGAAACGCTTGGAGATAAAGAGAT GTGTGGTGGTCCTGGGATGTCTGACCCAAGAGCAGGAGGTGATGCTACTGACTCAAGTCAAACAGCTCTTGATAATAAAGCTTCATTGCT CCATTCAATGCCTACTCACTCCTCTCCACGCTCTCGAGACTATAATCCATATAACTATTCAGATAGCATCAGTCCCTTCAACAAGTCTGC CCTCAAGGAAGCCATGTTTGATGATGATGCTGACCAGTTTCCTGACGTGCATTTGATTATGACACAGAAAATATGAACTCTGAAGATATT TATAGCTCTCTTAGAGGTGTCACTGAAGCAATCCAGAATTTCAGCTTCCGTAGCCAAGAAGATATGAATGAGCCATTGAAAAGGGATTCT AAAAAAGATGATGGCGATTCAAGTTCCATGGGGAGTCCTTTGACAAGACCAACACCACGATCACCAGCTAACTGGTCCAGTCCTCTTACT TCTCCTACCAATACATCACAGAATACTTTATCTCCAAGGCAGCACAGTCAGTGCTGATTTCATTATTTGAACTCAATACCCCAGAGTTTA CAATGTTATTAGGAGCTTTACCAAAAACTTTTCAGGATGGTGCTACCAAGCTTCTTCATAATCACCTTCGAAACACTGGCAATGGAACCC AGGTGAAGGTTGCTATCCTTAAATACATAGAAACTCTGGCCAAACAGATGGATCCAGGAGATTTTATAAATTCCAGTGAAACTCGCCTAG CAGTGTCTCGGGTCATCACTTGGACAACAGAACCCAAAAGTTCTGATGTTCGGAAGAGAGTCTTTTCCAAATGATCTTCAGTTCAATATT CTAATGAGATTTACAGTTGATCAGACCCAGACACCAAGCTTAAAGAAAAAAAATGGGTGCTGATTTGCTTGGATCTGTTCAGGCAAAAGT >In-frame_ENST00000301843_ENST00000539981_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(amino acids)=550AA_start in transcript=206_stop in transcript=1858 MWKASAGHAVSIAQDDAGADDWETDPDFVNDVSEKEQRWGAKTVQGSGHQEHINIHKLRENVFQEHQTLKEKELETGPKASHGYGGKFGV EQDRMDKSAVGHEYQSKLSKHCSQVDSVRGFGGKFGVQMDRVDQSAVGFEYQGKTEKHASQKDYSSGFGGKYGVQADRVDKSAVGFDYQG KTEKHESQRDYSKGFGGKYGIDKDKVDKSAVGFEYQGKTEKHESQKDYVKGFGGKFGVQTDRQDKCALGWDHQEKLQLHESQKDYKTGFG GKFGVQSERQDSAAVGFDYKEKLAKHESQQDYSKGFGGKYGVQKDRMDKNASTFEDVTQVSSAYQKTVPVEAVTSKTSNIRANFENLAKE KEQEDRRKAEAERAQRMAKERQEQEEARRKLEEQARAKTQTPPVSPAPQPTEERLPSSPVYEDAASFKAELSYRGPVSGTEPEPVYSMEA ADYREASSQQGLAYATEAVYESAEAPGHYPAEDSTYDEYENDLGITAVALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGVCKGRYGL -------------------------------------------------------------- >In-frame_ENST00000301843_ENST00000359576_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(transcript)=7314nt_BP=3272nt GATGCGGCCCCGCCCCCGCCCTCGGAACCGGAAGTAGAGCCTGGTGCCTGGGAGCGGCTGGCGCGGCGGAATCCAGGGCCGACCCGGGCC GGACCGACCCCAGGCGGCGACGGAATCAGTCCCCAATGCCTGGAAATTCCTCATTGGATTACTGTGTTTTAAACAGAATTTCGTGAACAG CCTTTTATCTCCAAGCGGAAAGAAAGATGTGGAAAGCTTCAGCAGGCCACGCTGTGTCCATCGCCCAGGATGACGCGGGGGCCGATGACT GGGAGACCGACCCTGATTTTGTGAATGATGTGAGTGAGAAGGAGCAAAGATGGGGTGCCAAGACGGTGCAGGGCTCCGGGCACCAGGAGC ATATCAACATACACAAGCTGAGGGAGAATGTCTTTCAAGAGCATCAGACCCTTAAGGAGAAGGAACTTGAAACAGGACCAAAAGCTTCCC ATGGCTATGGAGGGAAATTTGGTGTGGAACAAGACCGAATGGATAAGTCAGCTGTCGGCCACGAATATCAGTCGAAACTTTCCAAGCACT GCTCGCAGGTGGACTCGGTCCGTGGCTTCGGAGGCAAGTTTGGTGTCCAGATGGACAGAGTTGATCAGTCTGCTGTAGGCTTTGAATACC AGGGGAAGACTGAGAAGCATGCCTCCCAGAAAGACTACTCCAGTGGTTTTGGCGGCAAGTATGGCGTGCAGGCCGACCGAGTAGACAAGA GCGCGGTGGGCTTCGACTACCAGGGCAAGACGGAGAAGCACGAGTCACAGAGAGATTACTCCAAAGGTTTCGGCGGCAAATACGGTATCG ACAAGGACAAAGTGGATAAGAGCGCCGTTGGCTTTGAGTATCAAGGCAAAACGGAGAAGCACGAGTCCCAGAAAGACTATGTGAAAGGGT TTGGAGGAAAATTTGGTGTGCAGACAGACAGACAAGACAAATGTGCCCTTGGCTGGGATCACCAGGAGAAATTGCAGCTGCATGAATCCC AAAAAGATTATAAGACTGGTTTTGGAGGCAAATTCGGTGTTCAGTCGGAGAGGCAGGACTCCGCTGCTGTGGGGTTTGATTACAAGGAGA AGCTGGCCAAGCACGAGTCCCAGCAAGACTACTCCAAAGGATTCGGCGGGAAGTATGGGGTGCAGAAGGATCGGATGGATAAGAATGCGT CAACCTTTGAGGATGTCACCCAGGTGTCCTCTGCCTACCAGAAGACAGTACCTGTCGAAGCTGTGACCAGCAAAACAAGTAACATCAGAG CTAACTTTGAAAACCTCGCTAAGGAGAAAGAGCAGGAGGACAGGCGGAAGGCGGAGGCGGAGAGAGCCCAGCGGATGGCCAAGGAGCGGC AGGAGCAGGAAGAGGCCAGGAGGAAGCTGGAGGAGCAAGCCAGAGCCAAAACGCAAACGCCCCCTGTGTCGCCCGCACCTCAGCCAACCG AGGAGAGGCTGCCCTCGAGCCCCGTCTATGAGGATGCGGCTTCCTTCAAGGCAGAGCTGAGCTACAGAGGCCCTGTGAGTGGGACGGAGC CGGAGCCCGTGTACAGCATGGAGGCCGCTGACTACCGAGAGGCCAGCAGCCAGCAGGGCCTGGCCTATGCCACAGAGGCTGTCTATGAAA GCGCAGAGGCCCCGGGCCACTATCCCGCAGAGGACAGCACCTACGATGAGTACGAGAACGATCTGGGGATCACAGCCGTCGCCCTGTACG ACTACCAGGCTGCGGGCGATGATGAGATCTCATTTGACCCTGATGACATCATCACCAACATCGAGATGATTGACGACGGCTGGTGGCGCG GGGTGTGCAAGGGCCGGTACGGGCTCTTCCCAGCCAACTATGTGGAGCTGCGGCAGTAGGGCCCCCAGCCCCCCCCCGGAGCTGCGCCCT GGATCCTCACACTACAGATCAGGCCTTCTTTGGTTCTTGGGTGGTTTTGGGTTTTTTCTGTTTTTTTTTTTTTTTTTTTTTTTTTGAAGG TGGGGAGGGGAATATACACATTGCTTTTATATTTAATACTTTTGCTGATGCTTTTGAAAATGTTTATGCCACAGAATTTGCTAATATATT GTAATCACATTCCTTAGGAGGACTTTGGTAATTGGTTTTATGCATTGATGGTTTTTTTTTTCTTTTTTGCCAAATTGACTGTCACGCGGC AGCTTCAGGGAGCTCGCATTCTCTTGTGTTCGTGTTGCCCTCGTGCCCATCAAGTGCAGTCGGGACCTCCCAGGACAAGCACGAGGCCTC AGGTCGGCCCTGTGGCGGGTAGGCAGGAAGGACTGTCCCAGACGAGGGGCTTCCTCTAGAGTCTCACTGCTGGGGAGGAGAGGACTGGGC CTGATGGAAGTTAACCCGGAGCTAAGTCACCCAGAGCACAGGAGCTGCCATGTCAGATGGGAAATCTGCCTATGTCATACCGTGACAGCC CGCAGGATCAGGTGACTTCTAGCAGAGACCCTGGTTTTTTTCCTGTGCCCACTCCGGCTTGTCCTCATCTCTACCCATCCCCTGATGCCC AGGTCACCGGGAGGGCTGCTGGGAGCCTCTCCTGTCCCCGCCGGGCAGTGTCACTGAGTCCTTGAAATCCTCCCCTGCCCCGCGGGTCTC TGGATTGGGACGCACAGTGCAGTTGAGGTCTGCGTCGGGCTTGGCTTTTCACAAAGGCTGATGTCTTAACTGTCACCCATATGGTCCCTG GGCCACCGGGCAGCCTGGGGCGGTGTGTGTGCCATGTCACAGCATGGCCTCTCGGCCTTGGGAAGGAAGGCAGTGCCTGCTCTGCTGTGA GCCGCCAGGAACCCTCCTCCTGTCAATGGGGGTGTAGTATTTTTGCCAAAATATCATGTTCAATTTCAGTAGTTTGATCAGTTGAAGGCT AGAAGTGTGAAGTGCAGATGAGTGTGTGTTCTTCCCCAAGGTCCCCCCACAGCTCCAGGACACCGCTGTCCTGGCATTTGTGGCCACTCA CTTTGTAGGAAACTCATCTCCTTCCTGAGGAGCCGGGAGGCTGGACCAGTCCCGTCGTGCAGTCAGGTGGGCGGTGTGTCTTTCCAGAAG GTCACGTGGAAATGTCTCGGGACTTGGGTCCCGGAGTGCCCGTGAAGCGTGTTTTTGCTCCTGAGGTGCATTTTCTCATCATCCTTGCTT TACCACAATGAGCAATGAGGTCGGGTTTTATATGCAACTTATTGTATCTGAATTCCTGTAGCACACCTCATAGGTATGATTTTTTTAAAT TAAAGAATTCAGAATAAACATTTTTTGATCCAATGAAGCTACTGAATCTTTACATCAAACGTGCACAAACAGGTTCTGGAGGAGCTGATC CCACTACTGATGTTTCTGGACAAAGTTAGTGAAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCA ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAGTTTTTTGTTTCGTTTCGTTTTGTATTTTCTGTA ACAGAGGACTATCCTCAGTCTGCATGTAACTTTTATGATAGTTATTCCAAATTCAAGAAGAAGCAGTATTAACATCAATTGATCGACACA AAGTAATTTTTAATTTAATTCATCATTTCACATGTTTGTACTTTGTCTTCCCATTAACCTTTGCCAGTGTTATGATTGTATAAATTTTTT TAAATGCTGGTTAAACAGGAATGCTTAAAGCTTTAAAAGTTTAACAGTCTAAAACATTTTTGCTTTTATTCAACTGCAGAATAATATTTT TATTGCTACTTTGAGTTTTGTTTCGTATCATGTCCTATGCTAGAAATATTTAAATGATGTGAAACAAAGCAGGACTAATTTGAACTACAG CTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGGGGTGATCTATAGTTTGAAAACTAAAACCTCAAAGACA GATGTTACAGAATCAGCCAGTTCTGTAAAACTGATATTGTCTATTGGTTATTGATCTTGCCATCTTTATTTAAAACCATGTCCCTTCTAT GATCCCTTAAGAAAGCTGCACCAAATCATCTGCCTGTTTTTTCTTGATACTTACTGAAATAGAAGGTTTTATTGCAGGGTTTATTTTGGT TTGTTTATATCTTTGTTGTGAATGATGCTTTTTTGTATTTATTAATATCAAATTCACTTATGAATAAACTTGATAATGGAAACGGACAAA AAAAATCAAGTGCGTGTGTGTCCTTGACCGTCTTCTGTTTCTCACGTAATAAACAAATTATCGAGACATGGGAGTGACCAGCACCTTTTC TTTAAATGGTGGAACCTGGTTTCCTTTTACCATGAAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGGCT GTCTTTGTATAATGGGCTCAAATTCTCTACCTCTTCAGGGCTAATACTTTTAACTGAGCTGCTGCCTATAGTGTCTTTTGGAAAACTACT TAAAGGGTGATTTTCTGTTACTTTTTAGCAAATTTTTTTAATCACCTCTTGCTACACCCATTCTTTTCATGTGCAGCCGACTCAAAAATT ACCAGTTTTGGTGAAAGGCTAAATTAGATAATTTGGAACCAGGATACTAATGATTTCTCATCTTTACTTTTTTTTAATCCTAATATAAAG TGAATTTGATTGAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTGTACTTTGTTTAACTGAAAAAAATGT AGAAATATATGTAAAGAATTTAAGACAAGAGTACTGAATGGATGATTTGTCATAGGCTTTCCCCTTTCTTTCTGTTCTAGCAGCAGGAAA AGTTTCTCTATATCCTCTCCCTCTACCTGTAACAATTTTGTTTTCTACTGTTAATTACATTGTGTATTTATAGTTCTATGCTTACTGTTG TGCATATACTGGCAATAAAACTGTACATAACATTACTTGAAAAAGTTAATAATGTATATCAGTTTTTCTGTCTCACTGTGTAACAAGTCA CTCAGTTTTATTTTAACTTTAGACGGTCTTGTATCAGTGGTGGTCTCTTGAATTTTGTAAGTTCATCTGAGGAGAAAAGATTTTTCAGGT GTAGCTACCACAATCAAAGGTATATAGCTACATACGCATGTATATATTACAGCTTATCTGTAAGAAGAAAATGCATTTTAAACACAACTC TTCTCAGTAGCATTTTATGACCTTTGGATATGTTTGTAATCATTTCGAATCAAAATATTGATTTAATTTTGACCTCTGGTTTAAGATACT GCTTTAACTACTGTTGACAACCAAGTAGAGTGACTTAAGCTGAACAGTAACTAACTGGAAAATTAGATAAGCACCTGGCATCTAATGGCA GGCAGGCACTCAAGAAATGAATTAACTACATAATGGAAAAGTATGGTTTAATGTGTCCAAATGAAAGCTAGTAGATGTAAACATGGAAAA ATTGTGTTTACAATTTTATAATCTCAGTTGATAAGACTATAAGAAAGCTGATTATTTAAATCACTATATACAATACACCCTTAATTTGTT CATTCCAGAAACATACTGAGATGTCAGCTACTTAAAAATGGTCACAAAAAGCTACTGTTTATATTTTTCCTCCTGCTATTCTCTCCCAAA TTAATTATTAATAAGTGTTGTTCATTTACTGCACTGCTGAGAACTAATTAAAATTATATATTCCAGATTGTGGTTATGATAATTCAGAGA GCAGTGTTCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTTCATGCGGTAATTGGTGATGAACTAAAACCACATCTCAGTCAACTTACTG GCAGTAAAGTGGTGAGATCTGCTGAGGAAGCGGCATCAGTGTTGGCCACTTCAATTAGTCCAGAGCAGTGCATCAAAGTGCTTTGTCCTA TCATTCAAACTGCAGACTACCCAATTAATCTGGCTGCAATCAAAATGCAAACAAAAGTGATAGAGAGAGTGTCCAAGGAAACCCTAAACC TGCTTTTGCCAGAGATTATGCCAGGTCTAATACAGCCTACAATCAGGGCTTTGGCATTAAAGGTTTTAAGAGAAATCCTAAGGCATCAAC CAGCAAGATTTAAAAACTATGCAGAATTGACTGTCATGAAAACATTGGAAGCACATAAAGATCCTCATAAGGAGATCTTTCCCTAGATCA TTCTGACCTAGTTGCAGAGTTGTTGAAGGAGCTGTCTAACCATAATGAGCGTGTAGAAGAAAGAAAAATTGCCCTCTATGAACTTATGAA ACTGACACAGGAAGAATCTTTTAGTGTTTGGGATGAACACTTCAAAACAATATTGCTTTTATTGCTTGAAACGCTTGGAGATAAAGAGAT GTGTGGTGGTCCTGGGATGTCTGACCCAAGAGCAGGAGGTGATGCTACTGACTCAAGTCAAACAGCTCTTGATAATAAAGCTTCATTGCT CCATTCAATGCCTACTCACTCCTCTCCACGCTCTCGAGACTATAATCCATATAACTATTCAGATAGCATCAGTCCCTTCAACAAGTCTGC CCTCAAGGAAGCCATGTTTGATGATGATGCTGACCAGTTTCCTGACGTGCATTTGATTATGACACAGAAAATATGAACTCTGAAGATATT TATAGCTCTCTTAGAGGTGTCACTGAAGCAATCCAGAATTTCAGCTTCCGTAGCCAAGAAGATATGAATGAGCCATTGAAAAGGGATTCT AAAAAAGATGATGGCGATTCAAGTTCCATGGGGAGTCCTTTGACAAGACCAACACCACGATCACCAGCTAACTGGTCCAGTCCTCTTACT TCTCCTACCAATACATCACAGAATACTTTATCTCCAAGGCAGCACAGTCAGTGCTGATTTCATTATTTGAACTCAATACCCCAGAGTTTA CAATGTTATTAGGAGCTTTACCAAAAACTTTTCAGGATGGTGCTACCAAGCTTCTTCATAATCACCTTCGAAACACTGGCAATGGAACCC AGGTGAAGGTTGCTATCCTTAAATACATAGAAACTCTGGCCAAACAGATGGATCCAGGAGATTTTATAAATTCCAGTGAAACTCGCCTAG CAGTGTCTCGGGTCATCACTTGGACAACAGAACCCAAAAGTTCTGATGTTCGGAAGAGAGTCTTTTCCAAATGATCTTCAGTTCAATATT CTAATGAGATTTACAGTTGATCAGACCCAGACACCAAGCTTAAAGAAAAAAAATGGGTGCTGATTTGCTTGGATCTGTTCAGGCAAAAGT >In-frame_ENST00000301843_ENST00000359576_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(amino acids)=550AA_start in transcript=206_stop in transcript=1858 MWKASAGHAVSIAQDDAGADDWETDPDFVNDVSEKEQRWGAKTVQGSGHQEHINIHKLRENVFQEHQTLKEKELETGPKASHGYGGKFGV EQDRMDKSAVGHEYQSKLSKHCSQVDSVRGFGGKFGVQMDRVDQSAVGFEYQGKTEKHASQKDYSSGFGGKYGVQADRVDKSAVGFDYQG KTEKHESQRDYSKGFGGKYGIDKDKVDKSAVGFEYQGKTEKHESQKDYVKGFGGKFGVQTDRQDKCALGWDHQEKLQLHESQKDYKTGFG GKFGVQSERQDSAAVGFDYKEKLAKHESQQDYSKGFGGKYGVQKDRMDKNASTFEDVTQVSSAYQKTVPVEAVTSKTSNIRANFENLAKE KEQEDRRKAEAERAQRMAKERQEQEEARRKLEEQARAKTQTPPVSPAPQPTEERLPSSPVYEDAASFKAELSYRGPVSGTEPEPVYSMEA ADYREASSQQGLAYATEAVYESAEAPGHYPAEDSTYDEYENDLGITAVALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGVCKGRYGL -------------------------------------------------------------- >In-frame_ENST00000301843_ENST00000307312_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(transcript)=7314nt_BP=3272nt GATGCGGCCCCGCCCCCGCCCTCGGAACCGGAAGTAGAGCCTGGTGCCTGGGAGCGGCTGGCGCGGCGGAATCCAGGGCCGACCCGGGCC GGACCGACCCCAGGCGGCGACGGAATCAGTCCCCAATGCCTGGAAATTCCTCATTGGATTACTGTGTTTTAAACAGAATTTCGTGAACAG CCTTTTATCTCCAAGCGGAAAGAAAGATGTGGAAAGCTTCAGCAGGCCACGCTGTGTCCATCGCCCAGGATGACGCGGGGGCCGATGACT GGGAGACCGACCCTGATTTTGTGAATGATGTGAGTGAGAAGGAGCAAAGATGGGGTGCCAAGACGGTGCAGGGCTCCGGGCACCAGGAGC ATATCAACATACACAAGCTGAGGGAGAATGTCTTTCAAGAGCATCAGACCCTTAAGGAGAAGGAACTTGAAACAGGACCAAAAGCTTCCC ATGGCTATGGAGGGAAATTTGGTGTGGAACAAGACCGAATGGATAAGTCAGCTGTCGGCCACGAATATCAGTCGAAACTTTCCAAGCACT GCTCGCAGGTGGACTCGGTCCGTGGCTTCGGAGGCAAGTTTGGTGTCCAGATGGACAGAGTTGATCAGTCTGCTGTAGGCTTTGAATACC AGGGGAAGACTGAGAAGCATGCCTCCCAGAAAGACTACTCCAGTGGTTTTGGCGGCAAGTATGGCGTGCAGGCCGACCGAGTAGACAAGA GCGCGGTGGGCTTCGACTACCAGGGCAAGACGGAGAAGCACGAGTCACAGAGAGATTACTCCAAAGGTTTCGGCGGCAAATACGGTATCG ACAAGGACAAAGTGGATAAGAGCGCCGTTGGCTTTGAGTATCAAGGCAAAACGGAGAAGCACGAGTCCCAGAAAGACTATGTGAAAGGGT TTGGAGGAAAATTTGGTGTGCAGACAGACAGACAAGACAAATGTGCCCTTGGCTGGGATCACCAGGAGAAATTGCAGCTGCATGAATCCC AAAAAGATTATAAGACTGGTTTTGGAGGCAAATTCGGTGTTCAGTCGGAGAGGCAGGACTCCGCTGCTGTGGGGTTTGATTACAAGGAGA AGCTGGCCAAGCACGAGTCCCAGCAAGACTACTCCAAAGGATTCGGCGGGAAGTATGGGGTGCAGAAGGATCGGATGGATAAGAATGCGT CAACCTTTGAGGATGTCACCCAGGTGTCCTCTGCCTACCAGAAGACAGTACCTGTCGAAGCTGTGACCAGCAAAACAAGTAACATCAGAG CTAACTTTGAAAACCTCGCTAAGGAGAAAGAGCAGGAGGACAGGCGGAAGGCGGAGGCGGAGAGAGCCCAGCGGATGGCCAAGGAGCGGC AGGAGCAGGAAGAGGCCAGGAGGAAGCTGGAGGAGCAAGCCAGAGCCAAAACGCAAACGCCCCCTGTGTCGCCCGCACCTCAGCCAACCG AGGAGAGGCTGCCCTCGAGCCCCGTCTATGAGGATGCGGCTTCCTTCAAGGCAGAGCTGAGCTACAGAGGCCCTGTGAGTGGGACGGAGC CGGAGCCCGTGTACAGCATGGAGGCCGCTGACTACCGAGAGGCCAGCAGCCAGCAGGGCCTGGCCTATGCCACAGAGGCTGTCTATGAAA GCGCAGAGGCCCCGGGCCACTATCCCGCAGAGGACAGCACCTACGATGAGTACGAGAACGATCTGGGGATCACAGCCGTCGCCCTGTACG ACTACCAGGCTGCGGGCGATGATGAGATCTCATTTGACCCTGATGACATCATCACCAACATCGAGATGATTGACGACGGCTGGTGGCGCG GGGTGTGCAAGGGCCGGTACGGGCTCTTCCCAGCCAACTATGTGGAGCTGCGGCAGTAGGGCCCCCAGCCCCCCCCCGGAGCTGCGCCCT GGATCCTCACACTACAGATCAGGCCTTCTTTGGTTCTTGGGTGGTTTTGGGTTTTTTCTGTTTTTTTTTTTTTTTTTTTTTTTTTGAAGG TGGGGAGGGGAATATACACATTGCTTTTATATTTAATACTTTTGCTGATGCTTTTGAAAATGTTTATGCCACAGAATTTGCTAATATATT GTAATCACATTCCTTAGGAGGACTTTGGTAATTGGTTTTATGCATTGATGGTTTTTTTTTTCTTTTTTGCCAAATTGACTGTCACGCGGC AGCTTCAGGGAGCTCGCATTCTCTTGTGTTCGTGTTGCCCTCGTGCCCATCAAGTGCAGTCGGGACCTCCCAGGACAAGCACGAGGCCTC AGGTCGGCCCTGTGGCGGGTAGGCAGGAAGGACTGTCCCAGACGAGGGGCTTCCTCTAGAGTCTCACTGCTGGGGAGGAGAGGACTGGGC CTGATGGAAGTTAACCCGGAGCTAAGTCACCCAGAGCACAGGAGCTGCCATGTCAGATGGGAAATCTGCCTATGTCATACCGTGACAGCC CGCAGGATCAGGTGACTTCTAGCAGAGACCCTGGTTTTTTTCCTGTGCCCACTCCGGCTTGTCCTCATCTCTACCCATCCCCTGATGCCC AGGTCACCGGGAGGGCTGCTGGGAGCCTCTCCTGTCCCCGCCGGGCAGTGTCACTGAGTCCTTGAAATCCTCCCCTGCCCCGCGGGTCTC TGGATTGGGACGCACAGTGCAGTTGAGGTCTGCGTCGGGCTTGGCTTTTCACAAAGGCTGATGTCTTAACTGTCACCCATATGGTCCCTG GGCCACCGGGCAGCCTGGGGCGGTGTGTGTGCCATGTCACAGCATGGCCTCTCGGCCTTGGGAAGGAAGGCAGTGCCTGCTCTGCTGTGA GCCGCCAGGAACCCTCCTCCTGTCAATGGGGGTGTAGTATTTTTGCCAAAATATCATGTTCAATTTCAGTAGTTTGATCAGTTGAAGGCT AGAAGTGTGAAGTGCAGATGAGTGTGTGTTCTTCCCCAAGGTCCCCCCACAGCTCCAGGACACCGCTGTCCTGGCATTTGTGGCCACTCA CTTTGTAGGAAACTCATCTCCTTCCTGAGGAGCCGGGAGGCTGGACCAGTCCCGTCGTGCAGTCAGGTGGGCGGTGTGTCTTTCCAGAAG GTCACGTGGAAATGTCTCGGGACTTGGGTCCCGGAGTGCCCGTGAAGCGTGTTTTTGCTCCTGAGGTGCATTTTCTCATCATCCTTGCTT TACCACAATGAGCAATGAGGTCGGGTTTTATATGCAACTTATTGTATCTGAATTCCTGTAGCACACCTCATAGGTATGATTTTTTTAAAT TAAAGAATTCAGAATAAACATTTTTTGATCCAATGAAGCTACTGAATCTTTACATCAAACGTGCACAAACAGGTTCTGGAGGAGCTGATC CCACTACTGATGTTTCTGGACAAAGTTAGTGAAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCA ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAGTTTTTTGTTTCGTTTCGTTTTGTATTTTCTGTA ACAGAGGACTATCCTCAGTCTGCATGTAACTTTTATGATAGTTATTCCAAATTCAAGAAGAAGCAGTATTAACATCAATTGATCGACACA AAGTAATTTTTAATTTAATTCATCATTTCACATGTTTGTACTTTGTCTTCCCATTAACCTTTGCCAGTGTTATGATTGTATAAATTTTTT TAAATGCTGGTTAAACAGGAATGCTTAAAGCTTTAAAAGTTTAACAGTCTAAAACATTTTTGCTTTTATTCAACTGCAGAATAATATTTT TATTGCTACTTTGAGTTTTGTTTCGTATCATGTCCTATGCTAGAAATATTTAAATGATGTGAAACAAAGCAGGACTAATTTGAACTACAG CTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGGGGTGATCTATAGTTTGAAAACTAAAACCTCAAAGACA GATGTTACAGAATCAGCCAGTTCTGTAAAACTGATATTGTCTATTGGTTATTGATCTTGCCATCTTTATTTAAAACCATGTCCCTTCTAT GATCCCTTAAGAAAGCTGCACCAAATCATCTGCCTGTTTTTTCTTGATACTTACTGAAATAGAAGGTTTTATTGCAGGGTTTATTTTGGT TTGTTTATATCTTTGTTGTGAATGATGCTTTTTTGTATTTATTAATATCAAATTCACTTATGAATAAACTTGATAATGGAAACGGACAAA AAAAATCAAGTGCGTGTGTGTCCTTGACCGTCTTCTGTTTCTCACGTAATAAACAAATTATCGAGACATGGGAGTGACCAGCACCTTTTC TTTAAATGGTGGAACCTGGTTTCCTTTTACCATGAAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGGCT GTCTTTGTATAATGGGCTCAAATTCTCTACCTCTTCAGGGCTAATACTTTTAACTGAGCTGCTGCCTATAGTGTCTTTTGGAAAACTACT TAAAGGGTGATTTTCTGTTACTTTTTAGCAAATTTTTTTAATCACCTCTTGCTACACCCATTCTTTTCATGTGCAGCCGACTCAAAAATT ACCAGTTTTGGTGAAAGGCTAAATTAGATAATTTGGAACCAGGATACTAATGATTTCTCATCTTTACTTTTTTTTAATCCTAATATAAAG TGAATTTGATTGAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTGTACTTTGTTTAACTGAAAAAAATGT AGAAATATATGTAAAGAATTTAAGACAAGAGTACTGAATGGATGATTTGTCATAGGCTTTCCCCTTTCTTTCTGTTCTAGCAGCAGGAAA AGTTTCTCTATATCCTCTCCCTCTACCTGTAACAATTTTGTTTTCTACTGTTAATTACATTGTGTATTTATAGTTCTATGCTTACTGTTG TGCATATACTGGCAATAAAACTGTACATAACATTACTTGAAAAAGTTAATAATGTATATCAGTTTTTCTGTCTCACTGTGTAACAAGTCA CTCAGTTTTATTTTAACTTTAGACGGTCTTGTATCAGTGGTGGTCTCTTGAATTTTGTAAGTTCATCTGAGGAGAAAAGATTTTTCAGGT GTAGCTACCACAATCAAAGGTATATAGCTACATACGCATGTATATATTACAGCTTATCTGTAAGAAGAAAATGCATTTTAAACACAACTC TTCTCAGTAGCATTTTATGACCTTTGGATATGTTTGTAATCATTTCGAATCAAAATATTGATTTAATTTTGACCTCTGGTTTAAGATACT GCTTTAACTACTGTTGACAACCAAGTAGAGTGACTTAAGCTGAACAGTAACTAACTGGAAAATTAGATAAGCACCTGGCATCTAATGGCA GGCAGGCACTCAAGAAATGAATTAACTACATAATGGAAAAGTATGGTTTAATGTGTCCAAATGAAAGCTAGTAGATGTAAACATGGAAAA ATTGTGTTTACAATTTTATAATCTCAGTTGATAAGACTATAAGAAAGCTGATTATTTAAATCACTATATACAATACACCCTTAATTTGTT CATTCCAGAAACATACTGAGATGTCAGCTACTTAAAAATGGTCACAAAAAGCTACTGTTTATATTTTTCCTCCTGCTATTCTCTCCCAAA TTAATTATTAATAAGTGTTGTTCATTTACTGCACTGCTGAGAACTAATTAAAATTATATATTCCAGATTGTGGTTATGATAATTCAGAGA GCAGTGTTCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTTCATGCGGTAATTGGTGATGAACTAAAACCACATCTCAGTCAACTTACTG GCAGTAAAGTGGTGAGATCTGCTGAGGAAGCGGCATCAGTGTTGGCCACTTCAATTAGTCCAGAGCAGTGCATCAAAGTGCTTTGTCCTA TCATTCAAACTGCAGACTACCCAATTAATCTGGCTGCAATCAAAATGCAAACAAAAGTGATAGAGAGAGTGTCCAAGGAAACCCTAAACC TGCTTTTGCCAGAGATTATGCCAGGTCTAATACAGCCTACAATCAGGGCTTTGGCATTAAAGGTTTTAAGAGAAATCCTAAGGCATCAAC CAGCAAGATTTAAAAACTATGCAGAATTGACTGTCATGAAAACATTGGAAGCACATAAAGATCCTCATAAGGAGATCTTTCCCTAGATCA TTCTGACCTAGTTGCAGAGTTGTTGAAGGAGCTGTCTAACCATAATGAGCGTGTAGAAGAAAGAAAAATTGCCCTCTATGAACTTATGAA ACTGACACAGGAAGAATCTTTTAGTGTTTGGGATGAACACTTCAAAACAATATTGCTTTTATTGCTTGAAACGCTTGGAGATAAAGAGAT GTGTGGTGGTCCTGGGATGTCTGACCCAAGAGCAGGAGGTGATGCTACTGACTCAAGTCAAACAGCTCTTGATAATAAAGCTTCATTGCT CCATTCAATGCCTACTCACTCCTCTCCACGCTCTCGAGACTATAATCCATATAACTATTCAGATAGCATCAGTCCCTTCAACAAGTCTGC CCTCAAGGAAGCCATGTTTGATGATGATGCTGACCAGTTTCCTGACGTGCATTTGATTATGACACAGAAAATATGAACTCTGAAGATATT TATAGCTCTCTTAGAGGTGTCACTGAAGCAATCCAGAATTTCAGCTTCCGTAGCCAAGAAGATATGAATGAGCCATTGAAAAGGGATTCT AAAAAAGATGATGGCGATTCAAGTTCCATGGGGAGTCCTTTGACAAGACCAACACCACGATCACCAGCTAACTGGTCCAGTCCTCTTACT TCTCCTACCAATACATCACAGAATACTTTATCTCCAAGGCAGCACAGTCAGTGCTGATTTCATTATTTGAACTCAATACCCCAGAGTTTA CAATGTTATTAGGAGCTTTACCAAAAACTTTTCAGGATGGTGCTACCAAGCTTCTTCATAATCACCTTCGAAACACTGGCAATGGAACCC AGGTGAAGGTTGCTATCCTTAAATACATAGAAACTCTGGCCAAACAGATGGATCCAGGAGATTTTATAAATTCCAGTGAAACTCGCCTAG CAGTGTCTCGGGTCATCACTTGGACAACAGAACCCAAAAGTTCTGATGTTCGGAAGAGAGTCTTTTCCAAATGATCTTCAGTTCAATATT CTAATGAGATTTACAGTTGATCAGACCCAGACACCAAGCTTAAAGAAAAAAAATGGGTGCTGATTTGCTTGGATCTGTTCAGGCAAAAGT >In-frame_ENST00000301843_ENST00000307312_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(amino acids)=550AA_start in transcript=206_stop in transcript=1858 MWKASAGHAVSIAQDDAGADDWETDPDFVNDVSEKEQRWGAKTVQGSGHQEHINIHKLRENVFQEHQTLKEKELETGPKASHGYGGKFGV EQDRMDKSAVGHEYQSKLSKHCSQVDSVRGFGGKFGVQMDRVDQSAVGFEYQGKTEKHASQKDYSSGFGGKYGVQADRVDKSAVGFDYQG KTEKHESQRDYSKGFGGKYGIDKDKVDKSAVGFEYQGKTEKHESQKDYVKGFGGKFGVQTDRQDKCALGWDHQEKLQLHESQKDYKTGFG GKFGVQSERQDSAAVGFDYKEKLAKHESQQDYSKGFGGKYGVQKDRMDKNASTFEDVTQVSSAYQKTVPVEAVTSKTSNIRANFENLAKE KEQEDRRKAEAERAQRMAKERQEQEEARRKLEEQARAKTQTPPVSPAPQPTEERLPSSPVYEDAASFKAELSYRGPVSGTEPEPVYSMEA ADYREASSQQGLAYATEAVYESAEAPGHYPAEDSTYDEYENDLGITAVALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGVCKGRYGL -------------------------------------------------------------- >In-frame_ENST00000301843_ENST00000480013_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(transcript)=6570nt_BP=3272nt GATGCGGCCCCGCCCCCGCCCTCGGAACCGGAAGTAGAGCCTGGTGCCTGGGAGCGGCTGGCGCGGCGGAATCCAGGGCCGACCCGGGCC GGACCGACCCCAGGCGGCGACGGAATCAGTCCCCAATGCCTGGAAATTCCTCATTGGATTACTGTGTTTTAAACAGAATTTCGTGAACAG CCTTTTATCTCCAAGCGGAAAGAAAGATGTGGAAAGCTTCAGCAGGCCACGCTGTGTCCATCGCCCAGGATGACGCGGGGGCCGATGACT GGGAGACCGACCCTGATTTTGTGAATGATGTGAGTGAGAAGGAGCAAAGATGGGGTGCCAAGACGGTGCAGGGCTCCGGGCACCAGGAGC ATATCAACATACACAAGCTGAGGGAGAATGTCTTTCAAGAGCATCAGACCCTTAAGGAGAAGGAACTTGAAACAGGACCAAAAGCTTCCC ATGGCTATGGAGGGAAATTTGGTGTGGAACAAGACCGAATGGATAAGTCAGCTGTCGGCCACGAATATCAGTCGAAACTTTCCAAGCACT GCTCGCAGGTGGACTCGGTCCGTGGCTTCGGAGGCAAGTTTGGTGTCCAGATGGACAGAGTTGATCAGTCTGCTGTAGGCTTTGAATACC AGGGGAAGACTGAGAAGCATGCCTCCCAGAAAGACTACTCCAGTGGTTTTGGCGGCAAGTATGGCGTGCAGGCCGACCGAGTAGACAAGA GCGCGGTGGGCTTCGACTACCAGGGCAAGACGGAGAAGCACGAGTCACAGAGAGATTACTCCAAAGGTTTCGGCGGCAAATACGGTATCG ACAAGGACAAAGTGGATAAGAGCGCCGTTGGCTTTGAGTATCAAGGCAAAACGGAGAAGCACGAGTCCCAGAAAGACTATGTGAAAGGGT TTGGAGGAAAATTTGGTGTGCAGACAGACAGACAAGACAAATGTGCCCTTGGCTGGGATCACCAGGAGAAATTGCAGCTGCATGAATCCC AAAAAGATTATAAGACTGGTTTTGGAGGCAAATTCGGTGTTCAGTCGGAGAGGCAGGACTCCGCTGCTGTGGGGTTTGATTACAAGGAGA AGCTGGCCAAGCACGAGTCCCAGCAAGACTACTCCAAAGGATTCGGCGGGAAGTATGGGGTGCAGAAGGATCGGATGGATAAGAATGCGT CAACCTTTGAGGATGTCACCCAGGTGTCCTCTGCCTACCAGAAGACAGTACCTGTCGAAGCTGTGACCAGCAAAACAAGTAACATCAGAG CTAACTTTGAAAACCTCGCTAAGGAGAAAGAGCAGGAGGACAGGCGGAAGGCGGAGGCGGAGAGAGCCCAGCGGATGGCCAAGGAGCGGC AGGAGCAGGAAGAGGCCAGGAGGAAGCTGGAGGAGCAAGCCAGAGCCAAAACGCAAACGCCCCCTGTGTCGCCCGCACCTCAGCCAACCG AGGAGAGGCTGCCCTCGAGCCCCGTCTATGAGGATGCGGCTTCCTTCAAGGCAGAGCTGAGCTACAGAGGCCCTGTGAGTGGGACGGAGC CGGAGCCCGTGTACAGCATGGAGGCCGCTGACTACCGAGAGGCCAGCAGCCAGCAGGGCCTGGCCTATGCCACAGAGGCTGTCTATGAAA GCGCAGAGGCCCCGGGCCACTATCCCGCAGAGGACAGCACCTACGATGAGTACGAGAACGATCTGGGGATCACAGCCGTCGCCCTGTACG ACTACCAGGCTGCGGGCGATGATGAGATCTCATTTGACCCTGATGACATCATCACCAACATCGAGATGATTGACGACGGCTGGTGGCGCG GGGTGTGCAAGGGCCGGTACGGGCTCTTCCCAGCCAACTATGTGGAGCTGCGGCAGTAGGGCCCCCAGCCCCCCCCCGGAGCTGCGCCCT GGATCCTCACACTACAGATCAGGCCTTCTTTGGTTCTTGGGTGGTTTTGGGTTTTTTCTGTTTTTTTTTTTTTTTTTTTTTTTTTGAAGG TGGGGAGGGGAATATACACATTGCTTTTATATTTAATACTTTTGCTGATGCTTTTGAAAATGTTTATGCCACAGAATTTGCTAATATATT GTAATCACATTCCTTAGGAGGACTTTGGTAATTGGTTTTATGCATTGATGGTTTTTTTTTTCTTTTTTGCCAAATTGACTGTCACGCGGC AGCTTCAGGGAGCTCGCATTCTCTTGTGTTCGTGTTGCCCTCGTGCCCATCAAGTGCAGTCGGGACCTCCCAGGACAAGCACGAGGCCTC AGGTCGGCCCTGTGGCGGGTAGGCAGGAAGGACTGTCCCAGACGAGGGGCTTCCTCTAGAGTCTCACTGCTGGGGAGGAGAGGACTGGGC CTGATGGAAGTTAACCCGGAGCTAAGTCACCCAGAGCACAGGAGCTGCCATGTCAGATGGGAAATCTGCCTATGTCATACCGTGACAGCC CGCAGGATCAGGTGACTTCTAGCAGAGACCCTGGTTTTTTTCCTGTGCCCACTCCGGCTTGTCCTCATCTCTACCCATCCCCTGATGCCC AGGTCACCGGGAGGGCTGCTGGGAGCCTCTCCTGTCCCCGCCGGGCAGTGTCACTGAGTCCTTGAAATCCTCCCCTGCCCCGCGGGTCTC TGGATTGGGACGCACAGTGCAGTTGAGGTCTGCGTCGGGCTTGGCTTTTCACAAAGGCTGATGTCTTAACTGTCACCCATATGGTCCCTG GGCCACCGGGCAGCCTGGGGCGGTGTGTGTGCCATGTCACAGCATGGCCTCTCGGCCTTGGGAAGGAAGGCAGTGCCTGCTCTGCTGTGA GCCGCCAGGAACCCTCCTCCTGTCAATGGGGGTGTAGTATTTTTGCCAAAATATCATGTTCAATTTCAGTAGTTTGATCAGTTGAAGGCT AGAAGTGTGAAGTGCAGATGAGTGTGTGTTCTTCCCCAAGGTCCCCCCACAGCTCCAGGACACCGCTGTCCTGGCATTTGTGGCCACTCA CTTTGTAGGAAACTCATCTCCTTCCTGAGGAGCCGGGAGGCTGGACCAGTCCCGTCGTGCAGTCAGGTGGGCGGTGTGTCTTTCCAGAAG GTCACGTGGAAATGTCTCGGGACTTGGGTCCCGGAGTGCCCGTGAAGCGTGTTTTTGCTCCTGAGGTGCATTTTCTCATCATCCTTGCTT TACCACAATGAGCAATGAGGTCGGGTTTTATATGCAACTTATTGTATCTGAATTCCTGTAGCACACCTCATAGGTATGATTTTTTTAAAT TAAAGAATTCAGAATAAACATTTTTTGATCCAATGAAGCTACTGAATCTTTACATCAAACGTGCACAAACAGGTTCTGGAGGAGCTGATC CCACTACTGATGTTTCTGGACAAAGTTAGTGAAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCA ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAGTTTTTTGTTTCGTTTCGTTTTGTATTTTCTGTA ACAGAGGACTATCCTCAGTCTGCATGTAACTTTTATGATAGTTATTCCAAATTCAAGAAGAAGCAGTATTAACATCAATTGATCGACACA AAGTAATTTTTAATTTAATTCATCATTTCACATGTTTGTACTTTGTCTTCCCATTAACCTTTGCCAGTGTTATGATTGTATAAATTTTTT TAAATGCTGGTTAAACAGGAATGCTTAAAGCTTTAAAAGTTTAACAGTCTAAAACATTTTTGCTTTTATTCAACTGCAGAATAATATTTT TATTGCTACTTTGAGTTTTGTTTCGTATCATGTCCTATGCTAGAAATATTTAAATGATGTGAAACAAAGCAGGACTAATTTGAACTACAG CTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGGGGTGATCTATAGTTTGAAAACTAAAACCTCAAAGACA GATGTTACAGAATCAGCCAGTTCTGTAAAACTGATATTGTCTATTGGTTATTGATCTTGCCATCTTTATTTAAAACCATGTCCCTTCTAT GATCCCTTAAGAAAGCTGCACCAAATCATCTGCCTGTTTTTTCTTGATACTTACTGAAATAGAAGGTTTTATTGCAGGGTTTATTTTGGT TTGTTTATATCTTTGTTGTGAATGATGCTTTTTTGTATTTATTAATATCAAATTCACTTATGAATAAACTTGATAATGGAAACGGACAAA AAAAATCAAGTGCGTGTGTGTCCTTGACCGTCTTCTGTTTCTCACGTAATAAACAAATTATCGAGACATGGGAGTGACCAGCACCTTTTC TTTAAATGGTGGAACCTGGTTTCCTTTTACCATGAAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGGCT GTCTTTGTATAATGGGCTCAAATTCTCTACCTCTTCAGGGCTAATACTTTTAACTGAGCTGCTGCCTATAGTGTCTTTTGGAAAACTACT TAAAGGGTGATTTTCTGTTACTTTTTAGCAAATTTTTTTAATCACCTCTTGCTACACCCATTCTTTTCATGTGCAGCCGACTCAAAAATT ACCAGTTTTGGTGAAAGGCTAAATTAGATAATTTGGAACCAGGATACTAATGATTTCTCATCTTTACTTTTTTTTAATCCTAATATAAAG TGAATTTGATTGAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTGTACTTTGTTTAACTGAAAAAAATGT AGAAATATATGTAAAGAATTTAAGACAAGAGTACTGAATGGATGATTTGTCATAGGCTTTCCCCTTTCTTTCTGTTCTAGCAGCAGGAAA AGTTTCTCTATATCCTCTCCCTCTACCTGTAACAATTTTGTTTTCTACTGTTAATTACATTGTGTATTTATAGTTCTATGCTTACTGTTG TGCATATACTGGCAATAAAACTGTACATAACATTACTTGAAAAAGTTGGTTATGATAATTCAGAGAGCAGTGTTCGGAAAGCTTGTGTCT TCTGCCTGGTGGCTGTTCATGCGGTAATTGGTGATGAACTAAAACCACATCTCAGTCAACTTACTGGCAGTAAAGTGGTGAGATCTGCTG AGGAAGCGGCATCAGTGTTGGCCACTTCAATTAGTCCAGAGCAGTGCATCAAAGTGCTTTGTCCTATCATTCAAACTGCAGACTACCCAA TTAATCTGGCTGCAATCAAAATGCAAACAAAAGTGATAGAGAGAGTGTCCAAGGAAACCCTAAACCTGCTTTTGCCAGAGATTATGCCAG GTCTAATACAGCCTACAATCAGGGCTTTGGCATTAAAGGTTTTAAGAGAAATCCTAAGGCATCAACCAGCAAGATTTAAAAACTATGCAG AATTGACTGTCATGAAAACATTGGAAGCACATAAAGATCCTCATAAGGAGATCTTTCCCTAGATCATTCTGACCTAGTTGCAGAGTTGTT GAAGGAGCTGTCTAACCATAATGAGCGTGTAGAAGAAAGAAAAATTGCCCTCTATGAACTTATGAAACTGACACAGGAAGAATCTTTTAG TGTTTGGGATGAACACTTCAAAACAATATTGCTTTTATTGCTTGAAACGCTTGGAGATAAAGAGATGTGTGGTGGTCCTGGGATGTCTGA CCCAAGAGCAGGAGGTGATGCTACTGACTCAAGTCAAACAGCTCTTGATAATAAAGCTTCATTGCTCCATTCAATGCCTACTCACTCCTC TCCACGCTCTCGAGACTATAATCCATATAACTATTCAGATAGCATCAGTCCCTTCAACAAGTCTGCCCTCAAGGAAGCCATGTTTGATGA TGATGCTGACCAGTTTCCTGACGTGCATTTGATTATGACACAGAAAATATGAACTCTGAAGATATTTATAGCTCTCTTAGAGGTGTCACT GAAGCAATCCAGAATTTCAGCTTCCGTAGCCAAGAAGATATGAATGAGCCATTGAAAAGGGATTCTAAAAAAGATGATGGCGATTCAAGT TCCATGGGGAGTCCTTTGACAAGACCAACACCACGATCACCAGCTAACTGGTCCAGTCCTCTTACTTCTCCTACCAATACATCACAGAAT ACTTTATCTCCAAGGCAGCACAGTCAGTGCTGATTTCATTATTTGAACTCAATACCCCAGAGTTTACAATGTTATTAGGAGCTTTACCAA AAACTTTTCAGGATGGTGCTACCAAGCTTCTTCATAATCACCTTCGAAACACTGGCAATGGAACCCAGGTGAAGGTTGCTATCCTTAAAT ACATAGAAACTCTGGCCAAACAGATGGATCCAGGAGATTTTATAAATTCCAGTGAAACTCGCCTAGCAGTGTCTCGGGTCATCACTTGGA CAACAGAACCCAAAAGTTCTGATGTTCGGAAGAGAGTCTTTTCCAAATGATCTTCAGTTCAATATTCTAATGAGATTTACAGTTGATCAG ACCCAGACACCAAGCTTAAAGAAAAAAAATGGGTGCTGATTTGCTTGGATCTGTTCAGGCAAAAGTTCAGAAAGCCCTTGATGTTACAAG >In-frame_ENST00000301843_ENST00000480013_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(amino acids)=550AA_start in transcript=206_stop in transcript=1858 MWKASAGHAVSIAQDDAGADDWETDPDFVNDVSEKEQRWGAKTVQGSGHQEHINIHKLRENVFQEHQTLKEKELETGPKASHGYGGKFGV EQDRMDKSAVGHEYQSKLSKHCSQVDSVRGFGGKFGVQMDRVDQSAVGFEYQGKTEKHASQKDYSSGFGGKYGVQADRVDKSAVGFDYQG KTEKHESQRDYSKGFGGKYGIDKDKVDKSAVGFEYQGKTEKHESQKDYVKGFGGKFGVQTDRQDKCALGWDHQEKLQLHESQKDYKTGFG GKFGVQSERQDSAAVGFDYKEKLAKHESQQDYSKGFGGKYGVQKDRMDKNASTFEDVTQVSSAYQKTVPVEAVTSKTSNIRANFENLAKE KEQEDRRKAEAERAQRMAKERQEQEEARRKLEEQARAKTQTPPVSPAPQPTEERLPSSPVYEDAASFKAELSYRGPVSGTEPEPVYSMEA ADYREASSQQGLAYATEAVYESAEAPGHYPAEDSTYDEYENDLGITAVALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGVCKGRYGL -------------------------------------------------------------- >In-frame_ENST00000301843_ENST00000461133_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(transcript)=5808nt_BP=3272nt GATGCGGCCCCGCCCCCGCCCTCGGAACCGGAAGTAGAGCCTGGTGCCTGGGAGCGGCTGGCGCGGCGGAATCCAGGGCCGACCCGGGCC GGACCGACCCCAGGCGGCGACGGAATCAGTCCCCAATGCCTGGAAATTCCTCATTGGATTACTGTGTTTTAAACAGAATTTCGTGAACAG CCTTTTATCTCCAAGCGGAAAGAAAGATGTGGAAAGCTTCAGCAGGCCACGCTGTGTCCATCGCCCAGGATGACGCGGGGGCCGATGACT GGGAGACCGACCCTGATTTTGTGAATGATGTGAGTGAGAAGGAGCAAAGATGGGGTGCCAAGACGGTGCAGGGCTCCGGGCACCAGGAGC ATATCAACATACACAAGCTGAGGGAGAATGTCTTTCAAGAGCATCAGACCCTTAAGGAGAAGGAACTTGAAACAGGACCAAAAGCTTCCC ATGGCTATGGAGGGAAATTTGGTGTGGAACAAGACCGAATGGATAAGTCAGCTGTCGGCCACGAATATCAGTCGAAACTTTCCAAGCACT GCTCGCAGGTGGACTCGGTCCGTGGCTTCGGAGGCAAGTTTGGTGTCCAGATGGACAGAGTTGATCAGTCTGCTGTAGGCTTTGAATACC AGGGGAAGACTGAGAAGCATGCCTCCCAGAAAGACTACTCCAGTGGTTTTGGCGGCAAGTATGGCGTGCAGGCCGACCGAGTAGACAAGA GCGCGGTGGGCTTCGACTACCAGGGCAAGACGGAGAAGCACGAGTCACAGAGAGATTACTCCAAAGGTTTCGGCGGCAAATACGGTATCG ACAAGGACAAAGTGGATAAGAGCGCCGTTGGCTTTGAGTATCAAGGCAAAACGGAGAAGCACGAGTCCCAGAAAGACTATGTGAAAGGGT TTGGAGGAAAATTTGGTGTGCAGACAGACAGACAAGACAAATGTGCCCTTGGCTGGGATCACCAGGAGAAATTGCAGCTGCATGAATCCC AAAAAGATTATAAGACTGGTTTTGGAGGCAAATTCGGTGTTCAGTCGGAGAGGCAGGACTCCGCTGCTGTGGGGTTTGATTACAAGGAGA AGCTGGCCAAGCACGAGTCCCAGCAAGACTACTCCAAAGGATTCGGCGGGAAGTATGGGGTGCAGAAGGATCGGATGGATAAGAATGCGT CAACCTTTGAGGATGTCACCCAGGTGTCCTCTGCCTACCAGAAGACAGTACCTGTCGAAGCTGTGACCAGCAAAACAAGTAACATCAGAG CTAACTTTGAAAACCTCGCTAAGGAGAAAGAGCAGGAGGACAGGCGGAAGGCGGAGGCGGAGAGAGCCCAGCGGATGGCCAAGGAGCGGC AGGAGCAGGAAGAGGCCAGGAGGAAGCTGGAGGAGCAAGCCAGAGCCAAAACGCAAACGCCCCCTGTGTCGCCCGCACCTCAGCCAACCG AGGAGAGGCTGCCCTCGAGCCCCGTCTATGAGGATGCGGCTTCCTTCAAGGCAGAGCTGAGCTACAGAGGCCCTGTGAGTGGGACGGAGC CGGAGCCCGTGTACAGCATGGAGGCCGCTGACTACCGAGAGGCCAGCAGCCAGCAGGGCCTGGCCTATGCCACAGAGGCTGTCTATGAAA GCGCAGAGGCCCCGGGCCACTATCCCGCAGAGGACAGCACCTACGATGAGTACGAGAACGATCTGGGGATCACAGCCGTCGCCCTGTACG ACTACCAGGCTGCGGGCGATGATGAGATCTCATTTGACCCTGATGACATCATCACCAACATCGAGATGATTGACGACGGCTGGTGGCGCG GGGTGTGCAAGGGCCGGTACGGGCTCTTCCCAGCCAACTATGTGGAGCTGCGGCAGTAGGGCCCCCAGCCCCCCCCCGGAGCTGCGCCCT GGATCCTCACACTACAGATCAGGCCTTCTTTGGTTCTTGGGTGGTTTTGGGTTTTTTCTGTTTTTTTTTTTTTTTTTTTTTTTTTGAAGG TGGGGAGGGGAATATACACATTGCTTTTATATTTAATACTTTTGCTGATGCTTTTGAAAATGTTTATGCCACAGAATTTGCTAATATATT GTAATCACATTCCTTAGGAGGACTTTGGTAATTGGTTTTATGCATTGATGGTTTTTTTTTTCTTTTTTGCCAAATTGACTGTCACGCGGC AGCTTCAGGGAGCTCGCATTCTCTTGTGTTCGTGTTGCCCTCGTGCCCATCAAGTGCAGTCGGGACCTCCCAGGACAAGCACGAGGCCTC AGGTCGGCCCTGTGGCGGGTAGGCAGGAAGGACTGTCCCAGACGAGGGGCTTCCTCTAGAGTCTCACTGCTGGGGAGGAGAGGACTGGGC CTGATGGAAGTTAACCCGGAGCTAAGTCACCCAGAGCACAGGAGCTGCCATGTCAGATGGGAAATCTGCCTATGTCATACCGTGACAGCC CGCAGGATCAGGTGACTTCTAGCAGAGACCCTGGTTTTTTTCCTGTGCCCACTCCGGCTTGTCCTCATCTCTACCCATCCCCTGATGCCC AGGTCACCGGGAGGGCTGCTGGGAGCCTCTCCTGTCCCCGCCGGGCAGTGTCACTGAGTCCTTGAAATCCTCCCCTGCCCCGCGGGTCTC TGGATTGGGACGCACAGTGCAGTTGAGGTCTGCGTCGGGCTTGGCTTTTCACAAAGGCTGATGTCTTAACTGTCACCCATATGGTCCCTG GGCCACCGGGCAGCCTGGGGCGGTGTGTGTGCCATGTCACAGCATGGCCTCTCGGCCTTGGGAAGGAAGGCAGTGCCTGCTCTGCTGTGA GCCGCCAGGAACCCTCCTCCTGTCAATGGGGGTGTAGTATTTTTGCCAAAATATCATGTTCAATTTCAGTAGTTTGATCAGTTGAAGGCT AGAAGTGTGAAGTGCAGATGAGTGTGTGTTCTTCCCCAAGGTCCCCCCACAGCTCCAGGACACCGCTGTCCTGGCATTTGTGGCCACTCA CTTTGTAGGAAACTCATCTCCTTCCTGAGGAGCCGGGAGGCTGGACCAGTCCCGTCGTGCAGTCAGGTGGGCGGTGTGTCTTTCCAGAAG GTCACGTGGAAATGTCTCGGGACTTGGGTCCCGGAGTGCCCGTGAAGCGTGTTTTTGCTCCTGAGGTGCATTTTCTCATCATCCTTGCTT TACCACAATGAGCAATGAGGTCGGGTTTTATATGCAACTTATTGTATCTGAATTCCTGTAGCACACCTCATAGGTATGATTTTTTTAAAT TAAAGAATTCAGAATAAACATTTTTTGATCCAATGAAGCTACTGAATCTTTACATCAAACGTGCACAAACAGGTTCTGGAGGAGCTGATC CCACTACTGATGTTTCTGGACAAAGTTAGTGAAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCA ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAGTTTTTTGTTTCGTTTCGTTTTGTATTTTCTGTA ACAGAGGACTATCCTCAGTCTGCATGTAACTTTTATGATAGTTATTCCAAATTCAAGAAGAAGCAGTATTAACATCAATTGATCGACACA AAGTAATTTTTAATTTAATTCATCATTTCACATGTTTGTACTTTGTCTTCCCATTAACCTTTGCCAGTGTTATGATTGTATAAATTTTTT TAAATGCTGGTTAAACAGGAATGCTTAAAGCTTTAAAAGTTTAACAGTCTAAAACATTTTTGCTTTTATTCAACTGCAGAATAATATTTT TATTGCTACTTTGAGTTTTGTTTCGTATCATGTCCTATGCTAGAAATATTTAAATGATGTGAAACAAAGCAGGACTAATTTGAACTACAG CTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGGGGTGATCTATAGTTTGAAAACTAAAACCTCAAAGACA GATGTTACAGAATCAGCCAGTTCTGTAAAACTGATATTGTCTATTGGTTATTGATCTTGCCATCTTTATTTAAAACCATGTCCCTTCTAT GATCCCTTAAGAAAGCTGCACCAAATCATCTGCCTGTTTTTTCTTGATACTTACTGAAATAGAAGGTTTTATTGCAGGGTTTATTTTGGT TTGTTTATATCTTTGTTGTGAATGATGCTTTTTTGTATTTATTAATATCAAATTCACTTATGAATAAACTTGATAATGGAAACGGACAAA AAAAAGGTTATGATAATTCAGAGAGCAGTGTTCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTTCATGCGGTAATTGGTGATGAACTAA AACCACATCTCAGTCAACTTACTGGCAGTAAAGTGGTGAGATCTGCTGAGGAAGCGGCATCAGTGTTGGCCACTTCAATTAGTCCAGAGC AGTGCATCAAAGTGCTTTGTCCTATCATTCAAACTGCAGACTACCCAATTAATCTGGCTGCAATCAAAATGCAAACAAAAGTGATAGAGA GAGTGTCCAAGGAAACCCTAAACCTGCTTTTGCCAGAGATTATGCCAGGTCTAATACAGCCTACAATCAGGGCTTTGGCATTAAAGGTTT TAAGAGAAATCCTAAGGCATCAACCAGCAAGATTTAAAAACTATGCAGAATTGACTGTCATGAAAACATTGGAAGCACATAAAGATCCTC ATAAGGAGATCTTTCCCTAGATCATTCTGACCTAGTTGCAGAGTTGTTGAAGGAGCTGTCTAACCATAATGAGCGTGTAGAAGAAAGAAA AATTGCCCTCTATGAACTTATGAAACTGACACAGGAAGAATCTTTTAGTGTTTGGGATGAACACTTCAAAACAATATTGCTTTTATTGCT TGAAACGCTTGGAGATAAAGAGATGTGTGGTGGTCCTGGGATGTCTGACCCAAGAGCAGGAGGTGATGCTACTGACTCAAGTCAAACAGC TCTTGATAATAAAGCTTCATTGCTCCATTCAATGCCTACTCACTCCTCTCCACGCTCTCGAGACTATAATCCATATAACTATTCAGATAG CATCAGTCCCTTCAACAAGTCTGCCCTCAAGGAAGCCATGTTTGATGATGATGCTGACCAGTTTCCTGACGTGCATTTGATTATGACACA GAAAATATGAACTCTGAAGATATTTATAGCTCTCTTAGAGGTGTCACTGAAGCAATCCAGAATTTCAGCTTCCGTAGCCAAGAAGATATG AATGAGCCATTGAAAAGGGATTCTAAAAAAGATGATGGCGATTCAAGTTCCATGGGGAGTCCTTTGACAAGACCAACACCACGATCACCA GCTAACTGGTCCAGTCCTCTTACTTCTCCTACCAATACATCACAGAATACTTTATCTCCAAGGCAGCACAGTCAGTGCTGATTTCATTAT TTGAACTCAATACCCCAGAGTTTACAATGTTATTAGGAGCTTTACCAAAAACTTTTCAGGATGGTGCTACCAAGCTTCTTCATAATCACC TTCGAAACACTGGCAATGGAACCCAGGTGAAGGTTGCTATCCTTAAATACATAGAAACTCTGGCCAAACAGATGGATCCAGGAGATTTTA TAAATTCCAGTGAAACTCGCCTAGCAGTGTCTCGGGTCATCACTTGGACAACAGAACCCAAAAGTTCTGATGTTCGGAAGAGAGTCTTTT CCAAATGATCTTCAGTTCAATATTCTAATGAGATTTACAGTTGATCAGACCCAGACACCAAGCTTAAAGAAAAAAAATGGGTGCTGATTT >In-frame_ENST00000301843_ENST00000461133_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(amino acids)=550AA_start in transcript=206_stop in transcript=1858 MWKASAGHAVSIAQDDAGADDWETDPDFVNDVSEKEQRWGAKTVQGSGHQEHINIHKLRENVFQEHQTLKEKELETGPKASHGYGGKFGV EQDRMDKSAVGHEYQSKLSKHCSQVDSVRGFGGKFGVQMDRVDQSAVGFEYQGKTEKHASQKDYSSGFGGKYGVQADRVDKSAVGFDYQG KTEKHESQRDYSKGFGGKYGIDKDKVDKSAVGFEYQGKTEKHESQKDYVKGFGGKFGVQTDRQDKCALGWDHQEKLQLHESQKDYKTGFG GKFGVQSERQDSAAVGFDYKEKLAKHESQQDYSKGFGGKYGVQKDRMDKNASTFEDVTQVSSAYQKTVPVEAVTSKTSNIRANFENLAKE KEQEDRRKAEAERAQRMAKERQEQEEARRKLEEQARAKTQTPPVSPAPQPTEERLPSSPVYEDAASFKAELSYRGPVSGTEPEPVYSMEA ADYREASSQQGLAYATEAVYESAEAPGHYPAEDSTYDEYENDLGITAVALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGVCKGRYGL -------------------------------------------------------------- >In-frame_ENST00000376561_ENST00000468888_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(transcript)=6293nt_BP=2247nt AGAGCCTGGTGCCTGGGAGCGGCTGGCGCGGCGGAATCCAGGGCCGACCCGGGCCGGACCGACCCCAGGCGGCGACGGAATCAGTCCCCA ATGCCTGGAAATTCCTCATTGGATTACTGTGTTTTAAACAGAATTTCGTGAACAGCCTTTTATCTCCAAGCGGAAAGAAAGATGTGGAAA GCTTCAGCAGGCCACGCTGTGTCCATCGCCCAGGATGACGCGGGGGCCGATGACTGGGAGACCGACCCTGATTTTGTGAATGATGTGAGT GAGAAGGAGCAAAGATGGGGTGCCAAGACGGTGCAGGGCTCCGGGCACCAGGAGCATATCAACATACACAAGCTGAGGGAGAATGTCTTT CAAGAGCATCAGACCCTTAAGGAGAAGGAACTTGAAACAGGACCAAAAGCTTCCCATGGCTATGGAGGGAAATTTGGTGTGGAACAAGAC CGAATGGATAAGTCAGCTGTCGGCCACGAATATCAGTCGAAACTTTCCAAGCACTGCTCGCAGGTGGACTCGGTCCGTGGCTTCGGAGGC AAGTTTGGTGTCCAGATGGACAGAGTTGATCAGTCTGCTGTAGGCTTTGAATACCAGGGGAAGACTGAGAAGCATGCCTCCCAGAAAGAC TACTCCAGTGGTTTTGGCGGCAAGTATGGCGTGCAGGCCGACCGAGTAGACAAGAGCGCGGTGGGCTTCGACTACCAGGGCAAGACGGAG AAGCACGAGTCACAGAGAGATTACTCCAAAGGTTTCGGCGGCAAATACGGTATCGACAAGGACAAAGTGGATAAGAGCGCCGTTGGCTTT GAGTATCAAGGCAAAACGGAGAAGCACGAGTCCCAGAAAGACTATGTGAAAGGGTTTGGAGGAAAATTTGGTGTGCAGACAGACAGACAA GACAAATGTGCCCTTGGCTGGGATCACCAGGAGAAATTGCAGCTGCATGAATCCCAAAAAGACTACTCCAAAGGATTCGGCGGGAAGTAT GGGGTGCAGAAGGATCGGATGGATAAGAATGCGTCAACCTTTGAGGATGTCACCCAGGTGTCCTCTGCCTACCAGAAGACAGTACCTGTC GAAGCTGTGACCAGCAAAACAAGTAACATCAGAGCTAACTTTGAAAACCTCGCTAAGGAGAAAGAGCAGGAGGACAGGCGGAAGGCGGAG GCGGAGAGAGCCCAGCGGATGGCCAAGGAGCGGCAGGAGCAGGAAGAGGCCAGGAGGAAGCTGGAGGAGCAAGCCAGAGCCAAAACGCAA ACGCCCCCTGTGTCGCCCGCACCTCAGCCAACCGAGGAGAGGCTGCCCTCGAGCCCCGTCTATGAGGATGCGGCTTCCTTCAAGGCAGAG CTGAGCTACAGAGGCCCTGTGAGTGGGACGGAGCCGGAGCCCGTGTACAGCATGGAGGCCGCTGACTACCGAGAGGCCAGCAGCCAGCAG GGCCTGGCCTATGCCACAGAGGCTGTCTATGAAAGCGCAGAGGCCCCGGGCCACTATCCCGCAGAGGACAGCACCTACGATGAGTACGAG AACGATCTGGGGATCACAGCCGTCGCCCTGTACGACTACCAGGCTGCGGGCGATGATGAGATCTCATTTGACCCTGATGACATCATCACC AACATCGAGATGATTGACGACGGCTGGTGGCGCGGGGTGTGCAAGGGCCGCTTCAGGGAGCTCGCATTCTCTTGTGTTCGTGTTGCCCTC GTGCCCATCAAGTGCAGTCGGGACCTCCCAGGACAAGCACGAGGCCTCAGGTCGGCCCTGTGGCGGGTAGGCAGGAAGGACTGTCCCAGA CGAGGGGCTTCCTCTAGAGTCTCACTGCTGGGGAGGAGAGGACTGGGCCTGATGGAAGTTAACCCGGAGCTAAGTCACCCAGAGCACAGG AGCTGCCATGTCAGATGGGAAATCTGCCTATGTCATACCGTGACAGCCCGCAGGATCAGGAAACTCATCTCCTTCCTGAGGAGCCGGGAG GCTGGACCAGTCCCGTCGTGCAGTCAGGTGGGCGGTGTGTCTTTCCAGAAGGTCACGTGGAAATGTCTCGGGACTTGGGTCCCGGAGTGC CCGTGAAGCGTGTTTTTGCTCCTGAGGTGCATTTTCTCATCATCCTTGCTTTACCACAATGAGCAATGAGGTCGGGTTTTATATGCAACT TATTGTATCTGAATTCCTGTAGCACACCTCATAGGTATGATTTTTTTAAATTAAAGAATTCAGAATAAACATTTTTTGATCCACTTGATG AAGCTACTGAATCTTTACATCAAACGTGCACAAACAGGTTCTGGAGGAGCTGATCCCACTACTGATGTTTCTGGACAAAGTTAGTGAAGC TCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAACT TACTATTGTTTCCCAGTTTTAGTTTTTTGTTTCGTTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTTTA TGATAGTTATTCCAAATTCAAGAAGAAGCAGTATTAACATCAATTGATCGACACAAAGTAATTTTTAATTTAATTCATCATTTCACATGT TTGTACTTTGTCTTCCCATTAACCTTTGCCAGTGTTATGATTGTATAAATTTTTTTAAATGCTGGTTAAACAGGAATGCTTAAAGCTTTA AAAGTTTAACAGTCTAAAACATTTTTGCTTTTATTCAACTGCAGAATAATATTTTTATTGCTACTTTGAGTTTTGTTTCGTATCATGTCC TATGCTAGAAATATTTAAATGATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCAT TAGTTGCAACTTCTTTGGGGTGATCTATAGTTTGAAAACTAAAACCTCAAAGACAGATGTTACAGAATCAGCCAGTTCTGTAAAACTGAT ATTGTCTATTGGTTATTGATCTTGCCATCTTTATTTAAAACCATGTCCCTTCTATGATCCCTTAAGAAAGCTGCACCAAATCATCTGCCT GTTTTTTCTTGATACTTACTGAAATAGAAGGTTTTATTGCAGGGTTTATTTTGGTTTGTTTATATCTTTGTTGTGAATGATGCTTTTTTG TATTTATTAATATCAAATTCACTTATGAATAAACTTGATAATGGAAACGGACAAAAAAAATCAAGTGCGTGTGTGTCCTTGACCGTCTTC TGTTTCTCACGTAATAAACAAATTATCGAGACATGGGAGTGACCAGCACCTTTTCTTTAAATGGTGGAACCTGGTTTCCTTTTACCATGA AATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGGCTGTCTTTGTATAATGGGCTCAAATTCTCTACCTCTT CAGGGCTAATACTTTTAACTGAGCTGCTGCCTATAGTGTCTTTTGGAAAACTACTTAAAGGGTGATTTTCTGTTACTTTTTAGCAAATTT TTTTAATCACCTCTTGCTACACCCATTCTTTTCATGTGCAGCCGACTCAAAAATTACCAGTTTTGGTGAAAGGCTAAATTAGATAATTTG GAACCAGGATACTAATGATTTCTCATCTTTACTTTTTTTTAATCCTAATATAAAGTGAATTTGATTGAAAAGGCAAATAGCTATTAGGGA AGCAGTTTGCCATTGTTGCAGAGTTATCTGTACTTTGTTTAACTGAAAAAAATGTAGAAATATATGTAAAGAATTTAAGACAAGAGTACT GAATGGATGATTTGTCATAGGCTTTCCCCTTTCTTTCTGTTCTAGCAGCAGGAAAAGTTTCTCTATATCCTCTCCCTCTACCTGTAACAA TTTTGTTTTCTACTGTTAATTACATTGTGTATTTATAGTTCTATGCTTACTGTTGTGCATATACTGGCAATAAAACTGTACATAACATTA CTTGAAAAAGTTAATAATGTATATCAGTTTTTCTGTCTCACTGTGTAACAAGTCACTCAGTTTTATTTTAACTTTAGACGGTCTTGTATC AGTGGTGGTCTCTTGAATTTTGTAAGTTCATCTGAGGAGAAAAGATTTTTCAGGTGTAGCTACCACAATCAAAGGTATATAGCTACATAC GCATGTATATATTACAGCTTATCTGTAAGAAGAAAATGCATTTTAAACACAACTCTTCTCAGTAGCATTTTATGACCTTTGGATATGTTT GTAATCATTTCGAATCAAAATATTGATTTAATTTTGACCTCTGGTTTAAGATACTGCTTTAACTACTGTTGACAACCAAGTAGAGTGACT TAAGCTGAACAGTAACTAACTGGAAAATTAGATAAGCACCTGGCATCTAATGGCAGGCAGGCACTCAAGAAATGAATTAACTACATAATG GAAAAGTATGGTTTAATGTGTCCAAATGAAAGCTAGTAGATGTAAACATGGAAAAATTGTGTTTACAATTTTATAATCTCAGTTGATAAG ACTATAAGAAAGCTGATTATTTAAATCACTATATACAATACACCCTTAATTTGTTCATTCCAGAAACATACTGAGATGTCAGCTACTTAA AAATGGTCACAAAAAGCTACTGTTTATATTTTTCCTCCTGCTATTCTCTCCCAAATTAATTATTAATAAGTGTTGTTCATTTACTGCACT GCTGAGAACTAATTAAAATTATATATTCCAGATTGTAAAAGGTTATGATAATTCAGAGAGCAGTGTTCGGAAAGCTTGTGTCTTCTGCCT GGTGGCTGTTCATGCGGTAATTGGTGATGAACTAAAACCACATCTCAGTCAACTTACTGGCAGTAAAGTGGTGAGATCTGCTGAGGAAGC GGCATCAGTGTTGGCCACTTCAATTAGTCCAGAGCAGTGCATCAAAGTGCTTTGTCCTATCATTCAAACTGCAGACTACCCAATTAATCT GGCTGCAATCAAAATGCAAACAAAAGTGATAGAGAGAGTGTCCAAGGAAACCCTAAACCTGCTTTTGCCAGAGATTATGCCAGGTCTAAT ACAGCCTACAATCAGGGCTTTGGCATTAAAGGTTTTAAGAGAAATCCTAAGGCATCAACCAGCAAGATTTAAAAACTATGCAGAATTGAC TGTCATGAAAACATTGGAAGCACATAAAGATCCTCATAAGGAGATCTTTCCCTAGATCATTCTGACCTAGTTGCAGAGTTGTTGAAGGAG CTGTCTAACCATAATGAGCGTGTAGAAGAAAGAAAAATTGCCCTCTATGAACTTATGAAACTGACACAGGAAGAATCTTTTAGTGTTTGG GATGAACACTTCAAAACAATATTGCTTTTATTGCTTGAAACGCTTGGAGATAAAGAGATGTGTGGTGGTCCTGGGATGTCTGACCCAAGA GCAGGAGGTGATGCTACTGACTCAAGTCAAACAGCTCTTGATAATAAAGCTTCATTGCTCCATTCAATGCCTACTCACTCCTCTCCACGC TCTCGAGACTATAATCCATATAACTATTCAGATAGCATCAGTCCCTTCAACAAGTCTGCCCTCAAGGAAGCCATGTTTGATGATGATGCT GACCAGTTTCCTGACGTGCATTTGATTATGACACAGAAAATATGAACTCTGAAGATATTTATAGCTCTCTTAGAGGTGTCACTGAAGCAA TCCAGAATTTCAGCTTCCGTAGCCAAGAAGATATGAATGAGCCATTGAAAAGGGATTCTAAAAAAGATGATGGCGATTCAAGTTCCATGG GGAGTCCTTTGACAAGACCAACACCACGATCACCAGCTAACTGGTCCAGTCCTCTTACTTCTCCTACCAATACATCACAGAATACTTTAT CTCCAAGGCAGCACAGTCAGTGCTGATTTCATTATTTGAACTCAATACCCCAGAGTTTACAATGTTATTAGGAGCTTTACCAAAAACTTT TCAGGATGGTGCTACCAAGCTTCTTCATAATCACCTTCGAAACACTGGCAATGGAACCCAGGTGAAGGTTGCTATCCTTAAATACATAGA AACTCTGGCCAAACAGATGGATCCAGGAGATTTTATAAATTCCAGTGAAACTCGCCTAGCAGTGTCTCGGGTCATCACTTGGACAACAGA ACCCAAAAGTTCTGATGTTCGGAAGAGAGTCTTTTCCAAATGATCTTCAGTTCAATATTCTAATGAGATTTACAGTTGATCAGACCCAGA >In-frame_ENST00000376561_ENST00000468888_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(amino acids)=634AA_start in transcript=171_stop in transcript=2075 MWKASAGHAVSIAQDDAGADDWETDPDFVNDVSEKEQRWGAKTVQGSGHQEHINIHKLRENVFQEHQTLKEKELETGPKASHGYGGKFGV EQDRMDKSAVGHEYQSKLSKHCSQVDSVRGFGGKFGVQMDRVDQSAVGFEYQGKTEKHASQKDYSSGFGGKYGVQADRVDKSAVGFDYQG KTEKHESQRDYSKGFGGKYGIDKDKVDKSAVGFEYQGKTEKHESQKDYVKGFGGKFGVQTDRQDKCALGWDHQEKLQLHESQKDYSKGFG GKYGVQKDRMDKNASTFEDVTQVSSAYQKTVPVEAVTSKTSNIRANFENLAKEKEQEDRRKAEAERAQRMAKERQEQEEARRKLEEQARA KTQTPPVSPAPQPTEERLPSSPVYEDAASFKAELSYRGPVSGTEPEPVYSMEAADYREASSQQGLAYATEAVYESAEAPGHYPAEDSTYD EYENDLGITAVALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGVCKGRFRELAFSCVRVALVPIKCSRDLPGQARGLRSALWRVGRKD CPRRGASSRVSLLGRRGLGLMEVNPELSHPEHRSCHVRWEICLCHTVTARRIRKLISFLRSREAGPVPSCSQVGGVSFQKVTWKCLGTWV -------------------------------------------------------------- >In-frame_ENST00000376561_ENST00000399362_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(transcript)=6293nt_BP=2247nt AGAGCCTGGTGCCTGGGAGCGGCTGGCGCGGCGGAATCCAGGGCCGACCCGGGCCGGACCGACCCCAGGCGGCGACGGAATCAGTCCCCA ATGCCTGGAAATTCCTCATTGGATTACTGTGTTTTAAACAGAATTTCGTGAACAGCCTTTTATCTCCAAGCGGAAAGAAAGATGTGGAAA GCTTCAGCAGGCCACGCTGTGTCCATCGCCCAGGATGACGCGGGGGCCGATGACTGGGAGACCGACCCTGATTTTGTGAATGATGTGAGT GAGAAGGAGCAAAGATGGGGTGCCAAGACGGTGCAGGGCTCCGGGCACCAGGAGCATATCAACATACACAAGCTGAGGGAGAATGTCTTT CAAGAGCATCAGACCCTTAAGGAGAAGGAACTTGAAACAGGACCAAAAGCTTCCCATGGCTATGGAGGGAAATTTGGTGTGGAACAAGAC CGAATGGATAAGTCAGCTGTCGGCCACGAATATCAGTCGAAACTTTCCAAGCACTGCTCGCAGGTGGACTCGGTCCGTGGCTTCGGAGGC AAGTTTGGTGTCCAGATGGACAGAGTTGATCAGTCTGCTGTAGGCTTTGAATACCAGGGGAAGACTGAGAAGCATGCCTCCCAGAAAGAC TACTCCAGTGGTTTTGGCGGCAAGTATGGCGTGCAGGCCGACCGAGTAGACAAGAGCGCGGTGGGCTTCGACTACCAGGGCAAGACGGAG AAGCACGAGTCACAGAGAGATTACTCCAAAGGTTTCGGCGGCAAATACGGTATCGACAAGGACAAAGTGGATAAGAGCGCCGTTGGCTTT GAGTATCAAGGCAAAACGGAGAAGCACGAGTCCCAGAAAGACTATGTGAAAGGGTTTGGAGGAAAATTTGGTGTGCAGACAGACAGACAA GACAAATGTGCCCTTGGCTGGGATCACCAGGAGAAATTGCAGCTGCATGAATCCCAAAAAGACTACTCCAAAGGATTCGGCGGGAAGTAT GGGGTGCAGAAGGATCGGATGGATAAGAATGCGTCAACCTTTGAGGATGTCACCCAGGTGTCCTCTGCCTACCAGAAGACAGTACCTGTC GAAGCTGTGACCAGCAAAACAAGTAACATCAGAGCTAACTTTGAAAACCTCGCTAAGGAGAAAGAGCAGGAGGACAGGCGGAAGGCGGAG GCGGAGAGAGCCCAGCGGATGGCCAAGGAGCGGCAGGAGCAGGAAGAGGCCAGGAGGAAGCTGGAGGAGCAAGCCAGAGCCAAAACGCAA ACGCCCCCTGTGTCGCCCGCACCTCAGCCAACCGAGGAGAGGCTGCCCTCGAGCCCCGTCTATGAGGATGCGGCTTCCTTCAAGGCAGAG CTGAGCTACAGAGGCCCTGTGAGTGGGACGGAGCCGGAGCCCGTGTACAGCATGGAGGCCGCTGACTACCGAGAGGCCAGCAGCCAGCAG GGCCTGGCCTATGCCACAGAGGCTGTCTATGAAAGCGCAGAGGCCCCGGGCCACTATCCCGCAGAGGACAGCACCTACGATGAGTACGAG AACGATCTGGGGATCACAGCCGTCGCCCTGTACGACTACCAGGCTGCGGGCGATGATGAGATCTCATTTGACCCTGATGACATCATCACC AACATCGAGATGATTGACGACGGCTGGTGGCGCGGGGTGTGCAAGGGCCGCTTCAGGGAGCTCGCATTCTCTTGTGTTCGTGTTGCCCTC GTGCCCATCAAGTGCAGTCGGGACCTCCCAGGACAAGCACGAGGCCTCAGGTCGGCCCTGTGGCGGGTAGGCAGGAAGGACTGTCCCAGA CGAGGGGCTTCCTCTAGAGTCTCACTGCTGGGGAGGAGAGGACTGGGCCTGATGGAAGTTAACCCGGAGCTAAGTCACCCAGAGCACAGG AGCTGCCATGTCAGATGGGAAATCTGCCTATGTCATACCGTGACAGCCCGCAGGATCAGGAAACTCATCTCCTTCCTGAGGAGCCGGGAG GCTGGACCAGTCCCGTCGTGCAGTCAGGTGGGCGGTGTGTCTTTCCAGAAGGTCACGTGGAAATGTCTCGGGACTTGGGTCCCGGAGTGC CCGTGAAGCGTGTTTTTGCTCCTGAGGTGCATTTTCTCATCATCCTTGCTTTACCACAATGAGCAATGAGGTCGGGTTTTATATGCAACT TATTGTATCTGAATTCCTGTAGCACACCTCATAGGTATGATTTTTTTAAATTAAAGAATTCAGAATAAACATTTTTTGATCCACTTGATG AAGCTACTGAATCTTTACATCAAACGTGCACAAACAGGTTCTGGAGGAGCTGATCCCACTACTGATGTTTCTGGACAAAGTTAGTGAAGC TCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAACT TACTATTGTTTCCCAGTTTTAGTTTTTTGTTTCGTTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTTTA TGATAGTTATTCCAAATTCAAGAAGAAGCAGTATTAACATCAATTGATCGACACAAAGTAATTTTTAATTTAATTCATCATTTCACATGT TTGTACTTTGTCTTCCCATTAACCTTTGCCAGTGTTATGATTGTATAAATTTTTTTAAATGCTGGTTAAACAGGAATGCTTAAAGCTTTA AAAGTTTAACAGTCTAAAACATTTTTGCTTTTATTCAACTGCAGAATAATATTTTTATTGCTACTTTGAGTTTTGTTTCGTATCATGTCC TATGCTAGAAATATTTAAATGATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCAT TAGTTGCAACTTCTTTGGGGTGATCTATAGTTTGAAAACTAAAACCTCAAAGACAGATGTTACAGAATCAGCCAGTTCTGTAAAACTGAT ATTGTCTATTGGTTATTGATCTTGCCATCTTTATTTAAAACCATGTCCCTTCTATGATCCCTTAAGAAAGCTGCACCAAATCATCTGCCT GTTTTTTCTTGATACTTACTGAAATAGAAGGTTTTATTGCAGGGTTTATTTTGGTTTGTTTATATCTTTGTTGTGAATGATGCTTTTTTG TATTTATTAATATCAAATTCACTTATGAATAAACTTGATAATGGAAACGGACAAAAAAAATCAAGTGCGTGTGTGTCCTTGACCGTCTTC TGTTTCTCACGTAATAAACAAATTATCGAGACATGGGAGTGACCAGCACCTTTTCTTTAAATGGTGGAACCTGGTTTCCTTTTACCATGA AATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGGCTGTCTTTGTATAATGGGCTCAAATTCTCTACCTCTT CAGGGCTAATACTTTTAACTGAGCTGCTGCCTATAGTGTCTTTTGGAAAACTACTTAAAGGGTGATTTTCTGTTACTTTTTAGCAAATTT TTTTAATCACCTCTTGCTACACCCATTCTTTTCATGTGCAGCCGACTCAAAAATTACCAGTTTTGGTGAAAGGCTAAATTAGATAATTTG GAACCAGGATACTAATGATTTCTCATCTTTACTTTTTTTTAATCCTAATATAAAGTGAATTTGATTGAAAAGGCAAATAGCTATTAGGGA AGCAGTTTGCCATTGTTGCAGAGTTATCTGTACTTTGTTTAACTGAAAAAAATGTAGAAATATATGTAAAGAATTTAAGACAAGAGTACT GAATGGATGATTTGTCATAGGCTTTCCCCTTTCTTTCTGTTCTAGCAGCAGGAAAAGTTTCTCTATATCCTCTCCCTCTACCTGTAACAA TTTTGTTTTCTACTGTTAATTACATTGTGTATTTATAGTTCTATGCTTACTGTTGTGCATATACTGGCAATAAAACTGTACATAACATTA CTTGAAAAAGTTAATAATGTATATCAGTTTTTCTGTCTCACTGTGTAACAAGTCACTCAGTTTTATTTTAACTTTAGACGGTCTTGTATC AGTGGTGGTCTCTTGAATTTTGTAAGTTCATCTGAGGAGAAAAGATTTTTCAGGTGTAGCTACCACAATCAAAGGTATATAGCTACATAC GCATGTATATATTACAGCTTATCTGTAAGAAGAAAATGCATTTTAAACACAACTCTTCTCAGTAGCATTTTATGACCTTTGGATATGTTT GTAATCATTTCGAATCAAAATATTGATTTAATTTTGACCTCTGGTTTAAGATACTGCTTTAACTACTGTTGACAACCAAGTAGAGTGACT TAAGCTGAACAGTAACTAACTGGAAAATTAGATAAGCACCTGGCATCTAATGGCAGGCAGGCACTCAAGAAATGAATTAACTACATAATG GAAAAGTATGGTTTAATGTGTCCAAATGAAAGCTAGTAGATGTAAACATGGAAAAATTGTGTTTACAATTTTATAATCTCAGTTGATAAG ACTATAAGAAAGCTGATTATTTAAATCACTATATACAATACACCCTTAATTTGTTCATTCCAGAAACATACTGAGATGTCAGCTACTTAA AAATGGTCACAAAAAGCTACTGTTTATATTTTTCCTCCTGCTATTCTCTCCCAAATTAATTATTAATAAGTGTTGTTCATTTACTGCACT GCTGAGAACTAATTAAAATTATATATTCCAGATTGTAAAAGGTTATGATAATTCAGAGAGCAGTGTTCGGAAAGCTTGTGTCTTCTGCCT GGTGGCTGTTCATGCGGTAATTGGTGATGAACTAAAACCACATCTCAGTCAACTTACTGGCAGTAAAGTGGTGAGATCTGCTGAGGAAGC GGCATCAGTGTTGGCCACTTCAATTAGTCCAGAGCAGTGCATCAAAGTGCTTTGTCCTATCATTCAAACTGCAGACTACCCAATTAATCT GGCTGCAATCAAAATGCAAACAAAAGTGATAGAGAGAGTGTCCAAGGAAACCCTAAACCTGCTTTTGCCAGAGATTATGCCAGGTCTAAT ACAGCCTACAATCAGGGCTTTGGCATTAAAGGTTTTAAGAGAAATCCTAAGGCATCAACCAGCAAGATTTAAAAACTATGCAGAATTGAC TGTCATGAAAACATTGGAAGCACATAAAGATCCTCATAAGGAGATCTTTCCCTAGATCATTCTGACCTAGTTGCAGAGTTGTTGAAGGAG CTGTCTAACCATAATGAGCGTGTAGAAGAAAGAAAAATTGCCCTCTATGAACTTATGAAACTGACACAGGAAGAATCTTTTAGTGTTTGG GATGAACACTTCAAAACAATATTGCTTTTATTGCTTGAAACGCTTGGAGATAAAGAGATGTGTGGTGGTCCTGGGATGTCTGACCCAAGA GCAGGAGGTGATGCTACTGACTCAAGTCAAACAGCTCTTGATAATAAAGCTTCATTGCTCCATTCAATGCCTACTCACTCCTCTCCACGC TCTCGAGACTATAATCCATATAACTATTCAGATAGCATCAGTCCCTTCAACAAGTCTGCCCTCAAGGAAGCCATGTTTGATGATGATGCT GACCAGTTTCCTGACGTGCATTTGATTATGACACAGAAAATATGAACTCTGAAGATATTTATAGCTCTCTTAGAGGTGTCACTGAAGCAA TCCAGAATTTCAGCTTCCGTAGCCAAGAAGATATGAATGAGCCATTGAAAAGGGATTCTAAAAAAGATGATGGCGATTCAAGTTCCATGG GGAGTCCTTTGACAAGACCAACACCACGATCACCAGCTAACTGGTCCAGTCCTCTTACTTCTCCTACCAATACATCACAGAATACTTTAT CTCCAAGGCAGCACAGTCAGTGCTGATTTCATTATTTGAACTCAATACCCCAGAGTTTACAATGTTATTAGGAGCTTTACCAAAAACTTT TCAGGATGGTGCTACCAAGCTTCTTCATAATCACCTTCGAAACACTGGCAATGGAACCCAGGTGAAGGTTGCTATCCTTAAATACATAGA AACTCTGGCCAAACAGATGGATCCAGGAGATTTTATAAATTCCAGTGAAACTCGCCTAGCAGTGTCTCGGGTCATCACTTGGACAACAGA ACCCAAAAGTTCTGATGTTCGGAAGAGAGTCTTTTCCAAATGATCTTCAGTTCAATATTCTAATGAGATTTACAGTTGATCAGACCCAGA >In-frame_ENST00000376561_ENST00000399362_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(amino acids)=634AA_start in transcript=171_stop in transcript=2075 MWKASAGHAVSIAQDDAGADDWETDPDFVNDVSEKEQRWGAKTVQGSGHQEHINIHKLRENVFQEHQTLKEKELETGPKASHGYGGKFGV EQDRMDKSAVGHEYQSKLSKHCSQVDSVRGFGGKFGVQMDRVDQSAVGFEYQGKTEKHASQKDYSSGFGGKYGVQADRVDKSAVGFDYQG KTEKHESQRDYSKGFGGKYGIDKDKVDKSAVGFEYQGKTEKHESQKDYVKGFGGKFGVQTDRQDKCALGWDHQEKLQLHESQKDYSKGFG GKYGVQKDRMDKNASTFEDVTQVSSAYQKTVPVEAVTSKTSNIRANFENLAKEKEQEDRRKAEAERAQRMAKERQEQEEARRKLEEQARA KTQTPPVSPAPQPTEERLPSSPVYEDAASFKAELSYRGPVSGTEPEPVYSMEAADYREASSQQGLAYATEAVYESAEAPGHYPAEDSTYD EYENDLGITAVALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGVCKGRFRELAFSCVRVALVPIKCSRDLPGQARGLRSALWRVGRKD CPRRGASSRVSLLGRRGLGLMEVNPELSHPEHRSCHVRWEICLCHTVTARRIRKLISFLRSREAGPVPSCSQVGGVSFQKVTWKCLGTWV -------------------------------------------------------------- >In-frame_ENST00000376561_ENST00000539981_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(transcript)=6289nt_BP=2247nt AGAGCCTGGTGCCTGGGAGCGGCTGGCGCGGCGGAATCCAGGGCCGACCCGGGCCGGACCGACCCCAGGCGGCGACGGAATCAGTCCCCA ATGCCTGGAAATTCCTCATTGGATTACTGTGTTTTAAACAGAATTTCGTGAACAGCCTTTTATCTCCAAGCGGAAAGAAAGATGTGGAAA GCTTCAGCAGGCCACGCTGTGTCCATCGCCCAGGATGACGCGGGGGCCGATGACTGGGAGACCGACCCTGATTTTGTGAATGATGTGAGT GAGAAGGAGCAAAGATGGGGTGCCAAGACGGTGCAGGGCTCCGGGCACCAGGAGCATATCAACATACACAAGCTGAGGGAGAATGTCTTT CAAGAGCATCAGACCCTTAAGGAGAAGGAACTTGAAACAGGACCAAAAGCTTCCCATGGCTATGGAGGGAAATTTGGTGTGGAACAAGAC CGAATGGATAAGTCAGCTGTCGGCCACGAATATCAGTCGAAACTTTCCAAGCACTGCTCGCAGGTGGACTCGGTCCGTGGCTTCGGAGGC AAGTTTGGTGTCCAGATGGACAGAGTTGATCAGTCTGCTGTAGGCTTTGAATACCAGGGGAAGACTGAGAAGCATGCCTCCCAGAAAGAC TACTCCAGTGGTTTTGGCGGCAAGTATGGCGTGCAGGCCGACCGAGTAGACAAGAGCGCGGTGGGCTTCGACTACCAGGGCAAGACGGAG AAGCACGAGTCACAGAGAGATTACTCCAAAGGTTTCGGCGGCAAATACGGTATCGACAAGGACAAAGTGGATAAGAGCGCCGTTGGCTTT GAGTATCAAGGCAAAACGGAGAAGCACGAGTCCCAGAAAGACTATGTGAAAGGGTTTGGAGGAAAATTTGGTGTGCAGACAGACAGACAA GACAAATGTGCCCTTGGCTGGGATCACCAGGAGAAATTGCAGCTGCATGAATCCCAAAAAGACTACTCCAAAGGATTCGGCGGGAAGTAT GGGGTGCAGAAGGATCGGATGGATAAGAATGCGTCAACCTTTGAGGATGTCACCCAGGTGTCCTCTGCCTACCAGAAGACAGTACCTGTC GAAGCTGTGACCAGCAAAACAAGTAACATCAGAGCTAACTTTGAAAACCTCGCTAAGGAGAAAGAGCAGGAGGACAGGCGGAAGGCGGAG GCGGAGAGAGCCCAGCGGATGGCCAAGGAGCGGCAGGAGCAGGAAGAGGCCAGGAGGAAGCTGGAGGAGCAAGCCAGAGCCAAAACGCAA ACGCCCCCTGTGTCGCCCGCACCTCAGCCAACCGAGGAGAGGCTGCCCTCGAGCCCCGTCTATGAGGATGCGGCTTCCTTCAAGGCAGAG CTGAGCTACAGAGGCCCTGTGAGTGGGACGGAGCCGGAGCCCGTGTACAGCATGGAGGCCGCTGACTACCGAGAGGCCAGCAGCCAGCAG GGCCTGGCCTATGCCACAGAGGCTGTCTATGAAAGCGCAGAGGCCCCGGGCCACTATCCCGCAGAGGACAGCACCTACGATGAGTACGAG AACGATCTGGGGATCACAGCCGTCGCCCTGTACGACTACCAGGCTGCGGGCGATGATGAGATCTCATTTGACCCTGATGACATCATCACC AACATCGAGATGATTGACGACGGCTGGTGGCGCGGGGTGTGCAAGGGCCGCTTCAGGGAGCTCGCATTCTCTTGTGTTCGTGTTGCCCTC GTGCCCATCAAGTGCAGTCGGGACCTCCCAGGACAAGCACGAGGCCTCAGGTCGGCCCTGTGGCGGGTAGGCAGGAAGGACTGTCCCAGA CGAGGGGCTTCCTCTAGAGTCTCACTGCTGGGGAGGAGAGGACTGGGCCTGATGGAAGTTAACCCGGAGCTAAGTCACCCAGAGCACAGG AGCTGCCATGTCAGATGGGAAATCTGCCTATGTCATACCGTGACAGCCCGCAGGATCAGGAAACTCATCTCCTTCCTGAGGAGCCGGGAG GCTGGACCAGTCCCGTCGTGCAGTCAGGTGGGCGGTGTGTCTTTCCAGAAGGTCACGTGGAAATGTCTCGGGACTTGGGTCCCGGAGTGC CCGTGAAGCGTGTTTTTGCTCCTGAGGTGCATTTTCTCATCATCCTTGCTTTACCACAATGAGCAATGAGGTCGGGTTTTATATGCAACT TATTGTATCTGAATTCCTGTAGCACACCTCATAGGTATGATTTTTTTAAATTAAAGAATTCAGAATAAACATTTTTTGATCCACTTGATG AAGCTACTGAATCTTTACATCAAACGTGCACAAACAGGTTCTGGAGGAGCTGATCCCACTACTGATGTTTCTGGACAAAGTTAGTGAAGC TCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAACT TACTATTGTTTCCCAGTTTTAGTTTTTTGTTTCGTTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTTTA TGATAGTTATTCCAAATTCAAGAAGAAGCAGTATTAACATCAATTGATCGACACAAAGTAATTTTTAATTTAATTCATCATTTCACATGT TTGTACTTTGTCTTCCCATTAACCTTTGCCAGTGTTATGATTGTATAAATTTTTTTAAATGCTGGTTAAACAGGAATGCTTAAAGCTTTA AAAGTTTAACAGTCTAAAACATTTTTGCTTTTATTCAACTGCAGAATAATATTTTTATTGCTACTTTGAGTTTTGTTTCGTATCATGTCC TATGCTAGAAATATTTAAATGATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCAT TAGTTGCAACTTCTTTGGGGTGATCTATAGTTTGAAAACTAAAACCTCAAAGACAGATGTTACAGAATCAGCCAGTTCTGTAAAACTGAT ATTGTCTATTGGTTATTGATCTTGCCATCTTTATTTAAAACCATGTCCCTTCTATGATCCCTTAAGAAAGCTGCACCAAATCATCTGCCT GTTTTTTCTTGATACTTACTGAAATAGAAGGTTTTATTGCAGGGTTTATTTTGGTTTGTTTATATCTTTGTTGTGAATGATGCTTTTTTG TATTTATTAATATCAAATTCACTTATGAATAAACTTGATAATGGAAACGGACAAAAAAAATCAAGTGCGTGTGTGTCCTTGACCGTCTTC TGTTTCTCACGTAATAAACAAATTATCGAGACATGGGAGTGACCAGCACCTTTTCTTTAAATGGTGGAACCTGGTTTCCTTTTACCATGA AATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGGCTGTCTTTGTATAATGGGCTCAAATTCTCTACCTCTT CAGGGCTAATACTTTTAACTGAGCTGCTGCCTATAGTGTCTTTTGGAAAACTACTTAAAGGGTGATTTTCTGTTACTTTTTAGCAAATTT TTTTAATCACCTCTTGCTACACCCATTCTTTTCATGTGCAGCCGACTCAAAAATTACCAGTTTTGGTGAAAGGCTAAATTAGATAATTTG GAACCAGGATACTAATGATTTCTCATCTTTACTTTTTTTTAATCCTAATATAAAGTGAATTTGATTGAAAAGGCAAATAGCTATTAGGGA AGCAGTTTGCCATTGTTGCAGAGTTATCTGTACTTTGTTTAACTGAAAAAAATGTAGAAATATATGTAAAGAATTTAAGACAAGAGTACT GAATGGATGATTTGTCATAGGCTTTCCCCTTTCTTTCTGTTCTAGCAGCAGGAAAAGTTTCTCTATATCCTCTCCCTCTACCTGTAACAA TTTTGTTTTCTACTGTTAATTACATTGTGTATTTATAGTTCTATGCTTACTGTTGTGCATATACTGGCAATAAAACTGTACATAACATTA CTTGAAAAAGTTAATAATGTATATCAGTTTTTCTGTCTCACTGTGTAACAAGTCACTCAGTTTTATTTTAACTTTAGACGGTCTTGTATC AGTGGTGGTCTCTTGAATTTTGTAAGTTCATCTGAGGAGAAAAGATTTTTCAGGTGTAGCTACCACAATCAAAGGTATATAGCTACATAC GCATGTATATATTACAGCTTATCTGTAAGAAGAAAATGCATTTTAAACACAACTCTTCTCAGTAGCATTTTATGACCTTTGGATATGTTT GTAATCATTTCGAATCAAAATATTGATTTAATTTTGACCTCTGGTTTAAGATACTGCTTTAACTACTGTTGACAACCAAGTAGAGTGACT TAAGCTGAACAGTAACTAACTGGAAAATTAGATAAGCACCTGGCATCTAATGGCAGGCAGGCACTCAAGAAATGAATTAACTACATAATG GAAAAGTATGGTTTAATGTGTCCAAATGAAAGCTAGTAGATGTAAACATGGAAAAATTGTGTTTACAATTTTATAATCTCAGTTGATAAG ACTATAAGAAAGCTGATTATTTAAATCACTATATACAATACACCCTTAATTTGTTCATTCCAGAAACATACTGAGATGTCAGCTACTTAA AAATGGTCACAAAAAGCTACTGTTTATATTTTTCCTCCTGCTATTCTCTCCCAAATTAATTATTAATAAGTGTTGTTCATTTACTGCACT GCTGAGAACTAATTAAAATTATATATTCCAGATTGTGGTTATGATAATTCAGAGAGCAGTGTTCGGAAAGCTTGTGTCTTCTGCCTGGTG GCTGTTCATGCGGTAATTGGTGATGAACTAAAACCACATCTCAGTCAACTTACTGGCAGTAAAGTGGTGAGATCTGCTGAGGAAGCGGCA TCAGTGTTGGCCACTTCAATTAGTCCAGAGCAGTGCATCAAAGTGCTTTGTCCTATCATTCAAACTGCAGACTACCCAATTAATCTGGCT GCAATCAAAATGCAAACAAAAGTGATAGAGAGAGTGTCCAAGGAAACCCTAAACCTGCTTTTGCCAGAGATTATGCCAGGTCTAATACAG CCTACAATCAGGGCTTTGGCATTAAAGGTTTTAAGAGAAATCCTAAGGCATCAACCAGCAAGATTTAAAAACTATGCAGAATTGACTGTC ATGAAAACATTGGAAGCACATAAAGATCCTCATAAGGAGATCTTTCCCTAGATCATTCTGACCTAGTTGCAGAGTTGTTGAAGGAGCTGT CTAACCATAATGAGCGTGTAGAAGAAAGAAAAATTGCCCTCTATGAACTTATGAAACTGACACAGGAAGAATCTTTTAGTGTTTGGGATG AACACTTCAAAACAATATTGCTTTTATTGCTTGAAACGCTTGGAGATAAAGAGATGTGTGGTGGTCCTGGGATGTCTGACCCAAGAGCAG GAGGTGATGCTACTGACTCAAGTCAAACAGCTCTTGATAATAAAGCTTCATTGCTCCATTCAATGCCTACTCACTCCTCTCCACGCTCTC GAGACTATAATCCATATAACTATTCAGATAGCATCAGTCCCTTCAACAAGTCTGCCCTCAAGGAAGCCATGTTTGATGATGATGCTGACC AGTTTCCTGACGTGCATTTGATTATGACACAGAAAATATGAACTCTGAAGATATTTATAGCTCTCTTAGAGGTGTCACTGAAGCAATCCA GAATTTCAGCTTCCGTAGCCAAGAAGATATGAATGAGCCATTGAAAAGGGATTCTAAAAAAGATGATGGCGATTCAAGTTCCATGGGGAG TCCTTTGACAAGACCAACACCACGATCACCAGCTAACTGGTCCAGTCCTCTTACTTCTCCTACCAATACATCACAGAATACTTTATCTCC AAGGCAGCACAGTCAGTGCTGATTTCATTATTTGAACTCAATACCCCAGAGTTTACAATGTTATTAGGAGCTTTACCAAAAACTTTTCAG GATGGTGCTACCAAGCTTCTTCATAATCACCTTCGAAACACTGGCAATGGAACCCAGGTGAAGGTTGCTATCCTTAAATACATAGAAACT CTGGCCAAACAGATGGATCCAGGAGATTTTATAAATTCCAGTGAAACTCGCCTAGCAGTGTCTCGGGTCATCACTTGGACAACAGAACCC AAAAGTTCTGATGTTCGGAAGAGAGTCTTTTCCAAATGATCTTCAGTTCAATATTCTAATGAGATTTACAGTTGATCAGACCCAGACACC >In-frame_ENST00000376561_ENST00000539981_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(amino acids)=634AA_start in transcript=171_stop in transcript=2075 MWKASAGHAVSIAQDDAGADDWETDPDFVNDVSEKEQRWGAKTVQGSGHQEHINIHKLRENVFQEHQTLKEKELETGPKASHGYGGKFGV EQDRMDKSAVGHEYQSKLSKHCSQVDSVRGFGGKFGVQMDRVDQSAVGFEYQGKTEKHASQKDYSSGFGGKYGVQADRVDKSAVGFDYQG KTEKHESQRDYSKGFGGKYGIDKDKVDKSAVGFEYQGKTEKHESQKDYVKGFGGKFGVQTDRQDKCALGWDHQEKLQLHESQKDYSKGFG GKYGVQKDRMDKNASTFEDVTQVSSAYQKTVPVEAVTSKTSNIRANFENLAKEKEQEDRRKAEAERAQRMAKERQEQEEARRKLEEQARA KTQTPPVSPAPQPTEERLPSSPVYEDAASFKAELSYRGPVSGTEPEPVYSMEAADYREASSQQGLAYATEAVYESAEAPGHYPAEDSTYD EYENDLGITAVALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGVCKGRFRELAFSCVRVALVPIKCSRDLPGQARGLRSALWRVGRKD CPRRGASSRVSLLGRRGLGLMEVNPELSHPEHRSCHVRWEICLCHTVTARRIRKLISFLRSREAGPVPSCSQVGGVSFQKVTWKCLGTWV -------------------------------------------------------------- >In-frame_ENST00000376561_ENST00000359576_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(transcript)=6289nt_BP=2247nt AGAGCCTGGTGCCTGGGAGCGGCTGGCGCGGCGGAATCCAGGGCCGACCCGGGCCGGACCGACCCCAGGCGGCGACGGAATCAGTCCCCA ATGCCTGGAAATTCCTCATTGGATTACTGTGTTTTAAACAGAATTTCGTGAACAGCCTTTTATCTCCAAGCGGAAAGAAAGATGTGGAAA GCTTCAGCAGGCCACGCTGTGTCCATCGCCCAGGATGACGCGGGGGCCGATGACTGGGAGACCGACCCTGATTTTGTGAATGATGTGAGT GAGAAGGAGCAAAGATGGGGTGCCAAGACGGTGCAGGGCTCCGGGCACCAGGAGCATATCAACATACACAAGCTGAGGGAGAATGTCTTT CAAGAGCATCAGACCCTTAAGGAGAAGGAACTTGAAACAGGACCAAAAGCTTCCCATGGCTATGGAGGGAAATTTGGTGTGGAACAAGAC CGAATGGATAAGTCAGCTGTCGGCCACGAATATCAGTCGAAACTTTCCAAGCACTGCTCGCAGGTGGACTCGGTCCGTGGCTTCGGAGGC AAGTTTGGTGTCCAGATGGACAGAGTTGATCAGTCTGCTGTAGGCTTTGAATACCAGGGGAAGACTGAGAAGCATGCCTCCCAGAAAGAC TACTCCAGTGGTTTTGGCGGCAAGTATGGCGTGCAGGCCGACCGAGTAGACAAGAGCGCGGTGGGCTTCGACTACCAGGGCAAGACGGAG AAGCACGAGTCACAGAGAGATTACTCCAAAGGTTTCGGCGGCAAATACGGTATCGACAAGGACAAAGTGGATAAGAGCGCCGTTGGCTTT GAGTATCAAGGCAAAACGGAGAAGCACGAGTCCCAGAAAGACTATGTGAAAGGGTTTGGAGGAAAATTTGGTGTGCAGACAGACAGACAA GACAAATGTGCCCTTGGCTGGGATCACCAGGAGAAATTGCAGCTGCATGAATCCCAAAAAGACTACTCCAAAGGATTCGGCGGGAAGTAT GGGGTGCAGAAGGATCGGATGGATAAGAATGCGTCAACCTTTGAGGATGTCACCCAGGTGTCCTCTGCCTACCAGAAGACAGTACCTGTC GAAGCTGTGACCAGCAAAACAAGTAACATCAGAGCTAACTTTGAAAACCTCGCTAAGGAGAAAGAGCAGGAGGACAGGCGGAAGGCGGAG GCGGAGAGAGCCCAGCGGATGGCCAAGGAGCGGCAGGAGCAGGAAGAGGCCAGGAGGAAGCTGGAGGAGCAAGCCAGAGCCAAAACGCAA ACGCCCCCTGTGTCGCCCGCACCTCAGCCAACCGAGGAGAGGCTGCCCTCGAGCCCCGTCTATGAGGATGCGGCTTCCTTCAAGGCAGAG CTGAGCTACAGAGGCCCTGTGAGTGGGACGGAGCCGGAGCCCGTGTACAGCATGGAGGCCGCTGACTACCGAGAGGCCAGCAGCCAGCAG GGCCTGGCCTATGCCACAGAGGCTGTCTATGAAAGCGCAGAGGCCCCGGGCCACTATCCCGCAGAGGACAGCACCTACGATGAGTACGAG AACGATCTGGGGATCACAGCCGTCGCCCTGTACGACTACCAGGCTGCGGGCGATGATGAGATCTCATTTGACCCTGATGACATCATCACC AACATCGAGATGATTGACGACGGCTGGTGGCGCGGGGTGTGCAAGGGCCGCTTCAGGGAGCTCGCATTCTCTTGTGTTCGTGTTGCCCTC GTGCCCATCAAGTGCAGTCGGGACCTCCCAGGACAAGCACGAGGCCTCAGGTCGGCCCTGTGGCGGGTAGGCAGGAAGGACTGTCCCAGA CGAGGGGCTTCCTCTAGAGTCTCACTGCTGGGGAGGAGAGGACTGGGCCTGATGGAAGTTAACCCGGAGCTAAGTCACCCAGAGCACAGG AGCTGCCATGTCAGATGGGAAATCTGCCTATGTCATACCGTGACAGCCCGCAGGATCAGGAAACTCATCTCCTTCCTGAGGAGCCGGGAG GCTGGACCAGTCCCGTCGTGCAGTCAGGTGGGCGGTGTGTCTTTCCAGAAGGTCACGTGGAAATGTCTCGGGACTTGGGTCCCGGAGTGC CCGTGAAGCGTGTTTTTGCTCCTGAGGTGCATTTTCTCATCATCCTTGCTTTACCACAATGAGCAATGAGGTCGGGTTTTATATGCAACT TATTGTATCTGAATTCCTGTAGCACACCTCATAGGTATGATTTTTTTAAATTAAAGAATTCAGAATAAACATTTTTTGATCCACTTGATG AAGCTACTGAATCTTTACATCAAACGTGCACAAACAGGTTCTGGAGGAGCTGATCCCACTACTGATGTTTCTGGACAAAGTTAGTGAAGC TCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAACT TACTATTGTTTCCCAGTTTTAGTTTTTTGTTTCGTTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTTTA TGATAGTTATTCCAAATTCAAGAAGAAGCAGTATTAACATCAATTGATCGACACAAAGTAATTTTTAATTTAATTCATCATTTCACATGT TTGTACTTTGTCTTCCCATTAACCTTTGCCAGTGTTATGATTGTATAAATTTTTTTAAATGCTGGTTAAACAGGAATGCTTAAAGCTTTA AAAGTTTAACAGTCTAAAACATTTTTGCTTTTATTCAACTGCAGAATAATATTTTTATTGCTACTTTGAGTTTTGTTTCGTATCATGTCC TATGCTAGAAATATTTAAATGATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCAT TAGTTGCAACTTCTTTGGGGTGATCTATAGTTTGAAAACTAAAACCTCAAAGACAGATGTTACAGAATCAGCCAGTTCTGTAAAACTGAT ATTGTCTATTGGTTATTGATCTTGCCATCTTTATTTAAAACCATGTCCCTTCTATGATCCCTTAAGAAAGCTGCACCAAATCATCTGCCT GTTTTTTCTTGATACTTACTGAAATAGAAGGTTTTATTGCAGGGTTTATTTTGGTTTGTTTATATCTTTGTTGTGAATGATGCTTTTTTG TATTTATTAATATCAAATTCACTTATGAATAAACTTGATAATGGAAACGGACAAAAAAAATCAAGTGCGTGTGTGTCCTTGACCGTCTTC TGTTTCTCACGTAATAAACAAATTATCGAGACATGGGAGTGACCAGCACCTTTTCTTTAAATGGTGGAACCTGGTTTCCTTTTACCATGA AATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGGCTGTCTTTGTATAATGGGCTCAAATTCTCTACCTCTT CAGGGCTAATACTTTTAACTGAGCTGCTGCCTATAGTGTCTTTTGGAAAACTACTTAAAGGGTGATTTTCTGTTACTTTTTAGCAAATTT TTTTAATCACCTCTTGCTACACCCATTCTTTTCATGTGCAGCCGACTCAAAAATTACCAGTTTTGGTGAAAGGCTAAATTAGATAATTTG GAACCAGGATACTAATGATTTCTCATCTTTACTTTTTTTTAATCCTAATATAAAGTGAATTTGATTGAAAAGGCAAATAGCTATTAGGGA AGCAGTTTGCCATTGTTGCAGAGTTATCTGTACTTTGTTTAACTGAAAAAAATGTAGAAATATATGTAAAGAATTTAAGACAAGAGTACT GAATGGATGATTTGTCATAGGCTTTCCCCTTTCTTTCTGTTCTAGCAGCAGGAAAAGTTTCTCTATATCCTCTCCCTCTACCTGTAACAA TTTTGTTTTCTACTGTTAATTACATTGTGTATTTATAGTTCTATGCTTACTGTTGTGCATATACTGGCAATAAAACTGTACATAACATTA CTTGAAAAAGTTAATAATGTATATCAGTTTTTCTGTCTCACTGTGTAACAAGTCACTCAGTTTTATTTTAACTTTAGACGGTCTTGTATC AGTGGTGGTCTCTTGAATTTTGTAAGTTCATCTGAGGAGAAAAGATTTTTCAGGTGTAGCTACCACAATCAAAGGTATATAGCTACATAC GCATGTATATATTACAGCTTATCTGTAAGAAGAAAATGCATTTTAAACACAACTCTTCTCAGTAGCATTTTATGACCTTTGGATATGTTT GTAATCATTTCGAATCAAAATATTGATTTAATTTTGACCTCTGGTTTAAGATACTGCTTTAACTACTGTTGACAACCAAGTAGAGTGACT TAAGCTGAACAGTAACTAACTGGAAAATTAGATAAGCACCTGGCATCTAATGGCAGGCAGGCACTCAAGAAATGAATTAACTACATAATG GAAAAGTATGGTTTAATGTGTCCAAATGAAAGCTAGTAGATGTAAACATGGAAAAATTGTGTTTACAATTTTATAATCTCAGTTGATAAG ACTATAAGAAAGCTGATTATTTAAATCACTATATACAATACACCCTTAATTTGTTCATTCCAGAAACATACTGAGATGTCAGCTACTTAA AAATGGTCACAAAAAGCTACTGTTTATATTTTTCCTCCTGCTATTCTCTCCCAAATTAATTATTAATAAGTGTTGTTCATTTACTGCACT GCTGAGAACTAATTAAAATTATATATTCCAGATTGTGGTTATGATAATTCAGAGAGCAGTGTTCGGAAAGCTTGTGTCTTCTGCCTGGTG GCTGTTCATGCGGTAATTGGTGATGAACTAAAACCACATCTCAGTCAACTTACTGGCAGTAAAGTGGTGAGATCTGCTGAGGAAGCGGCA TCAGTGTTGGCCACTTCAATTAGTCCAGAGCAGTGCATCAAAGTGCTTTGTCCTATCATTCAAACTGCAGACTACCCAATTAATCTGGCT GCAATCAAAATGCAAACAAAAGTGATAGAGAGAGTGTCCAAGGAAACCCTAAACCTGCTTTTGCCAGAGATTATGCCAGGTCTAATACAG CCTACAATCAGGGCTTTGGCATTAAAGGTTTTAAGAGAAATCCTAAGGCATCAACCAGCAAGATTTAAAAACTATGCAGAATTGACTGTC ATGAAAACATTGGAAGCACATAAAGATCCTCATAAGGAGATCTTTCCCTAGATCATTCTGACCTAGTTGCAGAGTTGTTGAAGGAGCTGT CTAACCATAATGAGCGTGTAGAAGAAAGAAAAATTGCCCTCTATGAACTTATGAAACTGACACAGGAAGAATCTTTTAGTGTTTGGGATG AACACTTCAAAACAATATTGCTTTTATTGCTTGAAACGCTTGGAGATAAAGAGATGTGTGGTGGTCCTGGGATGTCTGACCCAAGAGCAG GAGGTGATGCTACTGACTCAAGTCAAACAGCTCTTGATAATAAAGCTTCATTGCTCCATTCAATGCCTACTCACTCCTCTCCACGCTCTC GAGACTATAATCCATATAACTATTCAGATAGCATCAGTCCCTTCAACAAGTCTGCCCTCAAGGAAGCCATGTTTGATGATGATGCTGACC AGTTTCCTGACGTGCATTTGATTATGACACAGAAAATATGAACTCTGAAGATATTTATAGCTCTCTTAGAGGTGTCACTGAAGCAATCCA GAATTTCAGCTTCCGTAGCCAAGAAGATATGAATGAGCCATTGAAAAGGGATTCTAAAAAAGATGATGGCGATTCAAGTTCCATGGGGAG TCCTTTGACAAGACCAACACCACGATCACCAGCTAACTGGTCCAGTCCTCTTACTTCTCCTACCAATACATCACAGAATACTTTATCTCC AAGGCAGCACAGTCAGTGCTGATTTCATTATTTGAACTCAATACCCCAGAGTTTACAATGTTATTAGGAGCTTTACCAAAAACTTTTCAG GATGGTGCTACCAAGCTTCTTCATAATCACCTTCGAAACACTGGCAATGGAACCCAGGTGAAGGTTGCTATCCTTAAATACATAGAAACT CTGGCCAAACAGATGGATCCAGGAGATTTTATAAATTCCAGTGAAACTCGCCTAGCAGTGTCTCGGGTCATCACTTGGACAACAGAACCC AAAAGTTCTGATGTTCGGAAGAGAGTCTTTTCCAAATGATCTTCAGTTCAATATTCTAATGAGATTTACAGTTGATCAGACCCAGACACC >In-frame_ENST00000376561_ENST00000359576_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(amino acids)=634AA_start in transcript=171_stop in transcript=2075 MWKASAGHAVSIAQDDAGADDWETDPDFVNDVSEKEQRWGAKTVQGSGHQEHINIHKLRENVFQEHQTLKEKELETGPKASHGYGGKFGV EQDRMDKSAVGHEYQSKLSKHCSQVDSVRGFGGKFGVQMDRVDQSAVGFEYQGKTEKHASQKDYSSGFGGKYGVQADRVDKSAVGFDYQG KTEKHESQRDYSKGFGGKYGIDKDKVDKSAVGFEYQGKTEKHESQKDYVKGFGGKFGVQTDRQDKCALGWDHQEKLQLHESQKDYSKGFG GKYGVQKDRMDKNASTFEDVTQVSSAYQKTVPVEAVTSKTSNIRANFENLAKEKEQEDRRKAEAERAQRMAKERQEQEEARRKLEEQARA KTQTPPVSPAPQPTEERLPSSPVYEDAASFKAELSYRGPVSGTEPEPVYSMEAADYREASSQQGLAYATEAVYESAEAPGHYPAEDSTYD EYENDLGITAVALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGVCKGRFRELAFSCVRVALVPIKCSRDLPGQARGLRSALWRVGRKD CPRRGASSRVSLLGRRGLGLMEVNPELSHPEHRSCHVRWEICLCHTVTARRIRKLISFLRSREAGPVPSCSQVGGVSFQKVTWKCLGTWV -------------------------------------------------------------- >In-frame_ENST00000376561_ENST00000307312_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(transcript)=6289nt_BP=2247nt AGAGCCTGGTGCCTGGGAGCGGCTGGCGCGGCGGAATCCAGGGCCGACCCGGGCCGGACCGACCCCAGGCGGCGACGGAATCAGTCCCCA ATGCCTGGAAATTCCTCATTGGATTACTGTGTTTTAAACAGAATTTCGTGAACAGCCTTTTATCTCCAAGCGGAAAGAAAGATGTGGAAA GCTTCAGCAGGCCACGCTGTGTCCATCGCCCAGGATGACGCGGGGGCCGATGACTGGGAGACCGACCCTGATTTTGTGAATGATGTGAGT GAGAAGGAGCAAAGATGGGGTGCCAAGACGGTGCAGGGCTCCGGGCACCAGGAGCATATCAACATACACAAGCTGAGGGAGAATGTCTTT CAAGAGCATCAGACCCTTAAGGAGAAGGAACTTGAAACAGGACCAAAAGCTTCCCATGGCTATGGAGGGAAATTTGGTGTGGAACAAGAC CGAATGGATAAGTCAGCTGTCGGCCACGAATATCAGTCGAAACTTTCCAAGCACTGCTCGCAGGTGGACTCGGTCCGTGGCTTCGGAGGC AAGTTTGGTGTCCAGATGGACAGAGTTGATCAGTCTGCTGTAGGCTTTGAATACCAGGGGAAGACTGAGAAGCATGCCTCCCAGAAAGAC TACTCCAGTGGTTTTGGCGGCAAGTATGGCGTGCAGGCCGACCGAGTAGACAAGAGCGCGGTGGGCTTCGACTACCAGGGCAAGACGGAG AAGCACGAGTCACAGAGAGATTACTCCAAAGGTTTCGGCGGCAAATACGGTATCGACAAGGACAAAGTGGATAAGAGCGCCGTTGGCTTT GAGTATCAAGGCAAAACGGAGAAGCACGAGTCCCAGAAAGACTATGTGAAAGGGTTTGGAGGAAAATTTGGTGTGCAGACAGACAGACAA GACAAATGTGCCCTTGGCTGGGATCACCAGGAGAAATTGCAGCTGCATGAATCCCAAAAAGACTACTCCAAAGGATTCGGCGGGAAGTAT GGGGTGCAGAAGGATCGGATGGATAAGAATGCGTCAACCTTTGAGGATGTCACCCAGGTGTCCTCTGCCTACCAGAAGACAGTACCTGTC GAAGCTGTGACCAGCAAAACAAGTAACATCAGAGCTAACTTTGAAAACCTCGCTAAGGAGAAAGAGCAGGAGGACAGGCGGAAGGCGGAG GCGGAGAGAGCCCAGCGGATGGCCAAGGAGCGGCAGGAGCAGGAAGAGGCCAGGAGGAAGCTGGAGGAGCAAGCCAGAGCCAAAACGCAA ACGCCCCCTGTGTCGCCCGCACCTCAGCCAACCGAGGAGAGGCTGCCCTCGAGCCCCGTCTATGAGGATGCGGCTTCCTTCAAGGCAGAG CTGAGCTACAGAGGCCCTGTGAGTGGGACGGAGCCGGAGCCCGTGTACAGCATGGAGGCCGCTGACTACCGAGAGGCCAGCAGCCAGCAG GGCCTGGCCTATGCCACAGAGGCTGTCTATGAAAGCGCAGAGGCCCCGGGCCACTATCCCGCAGAGGACAGCACCTACGATGAGTACGAG AACGATCTGGGGATCACAGCCGTCGCCCTGTACGACTACCAGGCTGCGGGCGATGATGAGATCTCATTTGACCCTGATGACATCATCACC AACATCGAGATGATTGACGACGGCTGGTGGCGCGGGGTGTGCAAGGGCCGCTTCAGGGAGCTCGCATTCTCTTGTGTTCGTGTTGCCCTC GTGCCCATCAAGTGCAGTCGGGACCTCCCAGGACAAGCACGAGGCCTCAGGTCGGCCCTGTGGCGGGTAGGCAGGAAGGACTGTCCCAGA CGAGGGGCTTCCTCTAGAGTCTCACTGCTGGGGAGGAGAGGACTGGGCCTGATGGAAGTTAACCCGGAGCTAAGTCACCCAGAGCACAGG AGCTGCCATGTCAGATGGGAAATCTGCCTATGTCATACCGTGACAGCCCGCAGGATCAGGAAACTCATCTCCTTCCTGAGGAGCCGGGAG GCTGGACCAGTCCCGTCGTGCAGTCAGGTGGGCGGTGTGTCTTTCCAGAAGGTCACGTGGAAATGTCTCGGGACTTGGGTCCCGGAGTGC CCGTGAAGCGTGTTTTTGCTCCTGAGGTGCATTTTCTCATCATCCTTGCTTTACCACAATGAGCAATGAGGTCGGGTTTTATATGCAACT TATTGTATCTGAATTCCTGTAGCACACCTCATAGGTATGATTTTTTTAAATTAAAGAATTCAGAATAAACATTTTTTGATCCACTTGATG AAGCTACTGAATCTTTACATCAAACGTGCACAAACAGGTTCTGGAGGAGCTGATCCCACTACTGATGTTTCTGGACAAAGTTAGTGAAGC TCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAACT TACTATTGTTTCCCAGTTTTAGTTTTTTGTTTCGTTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTTTA TGATAGTTATTCCAAATTCAAGAAGAAGCAGTATTAACATCAATTGATCGACACAAAGTAATTTTTAATTTAATTCATCATTTCACATGT TTGTACTTTGTCTTCCCATTAACCTTTGCCAGTGTTATGATTGTATAAATTTTTTTAAATGCTGGTTAAACAGGAATGCTTAAAGCTTTA AAAGTTTAACAGTCTAAAACATTTTTGCTTTTATTCAACTGCAGAATAATATTTTTATTGCTACTTTGAGTTTTGTTTCGTATCATGTCC TATGCTAGAAATATTTAAATGATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCAT TAGTTGCAACTTCTTTGGGGTGATCTATAGTTTGAAAACTAAAACCTCAAAGACAGATGTTACAGAATCAGCCAGTTCTGTAAAACTGAT ATTGTCTATTGGTTATTGATCTTGCCATCTTTATTTAAAACCATGTCCCTTCTATGATCCCTTAAGAAAGCTGCACCAAATCATCTGCCT GTTTTTTCTTGATACTTACTGAAATAGAAGGTTTTATTGCAGGGTTTATTTTGGTTTGTTTATATCTTTGTTGTGAATGATGCTTTTTTG TATTTATTAATATCAAATTCACTTATGAATAAACTTGATAATGGAAACGGACAAAAAAAATCAAGTGCGTGTGTGTCCTTGACCGTCTTC TGTTTCTCACGTAATAAACAAATTATCGAGACATGGGAGTGACCAGCACCTTTTCTTTAAATGGTGGAACCTGGTTTCCTTTTACCATGA AATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGGCTGTCTTTGTATAATGGGCTCAAATTCTCTACCTCTT CAGGGCTAATACTTTTAACTGAGCTGCTGCCTATAGTGTCTTTTGGAAAACTACTTAAAGGGTGATTTTCTGTTACTTTTTAGCAAATTT TTTTAATCACCTCTTGCTACACCCATTCTTTTCATGTGCAGCCGACTCAAAAATTACCAGTTTTGGTGAAAGGCTAAATTAGATAATTTG GAACCAGGATACTAATGATTTCTCATCTTTACTTTTTTTTAATCCTAATATAAAGTGAATTTGATTGAAAAGGCAAATAGCTATTAGGGA AGCAGTTTGCCATTGTTGCAGAGTTATCTGTACTTTGTTTAACTGAAAAAAATGTAGAAATATATGTAAAGAATTTAAGACAAGAGTACT GAATGGATGATTTGTCATAGGCTTTCCCCTTTCTTTCTGTTCTAGCAGCAGGAAAAGTTTCTCTATATCCTCTCCCTCTACCTGTAACAA TTTTGTTTTCTACTGTTAATTACATTGTGTATTTATAGTTCTATGCTTACTGTTGTGCATATACTGGCAATAAAACTGTACATAACATTA CTTGAAAAAGTTAATAATGTATATCAGTTTTTCTGTCTCACTGTGTAACAAGTCACTCAGTTTTATTTTAACTTTAGACGGTCTTGTATC AGTGGTGGTCTCTTGAATTTTGTAAGTTCATCTGAGGAGAAAAGATTTTTCAGGTGTAGCTACCACAATCAAAGGTATATAGCTACATAC GCATGTATATATTACAGCTTATCTGTAAGAAGAAAATGCATTTTAAACACAACTCTTCTCAGTAGCATTTTATGACCTTTGGATATGTTT GTAATCATTTCGAATCAAAATATTGATTTAATTTTGACCTCTGGTTTAAGATACTGCTTTAACTACTGTTGACAACCAAGTAGAGTGACT TAAGCTGAACAGTAACTAACTGGAAAATTAGATAAGCACCTGGCATCTAATGGCAGGCAGGCACTCAAGAAATGAATTAACTACATAATG GAAAAGTATGGTTTAATGTGTCCAAATGAAAGCTAGTAGATGTAAACATGGAAAAATTGTGTTTACAATTTTATAATCTCAGTTGATAAG ACTATAAGAAAGCTGATTATTTAAATCACTATATACAATACACCCTTAATTTGTTCATTCCAGAAACATACTGAGATGTCAGCTACTTAA AAATGGTCACAAAAAGCTACTGTTTATATTTTTCCTCCTGCTATTCTCTCCCAAATTAATTATTAATAAGTGTTGTTCATTTACTGCACT GCTGAGAACTAATTAAAATTATATATTCCAGATTGTGGTTATGATAATTCAGAGAGCAGTGTTCGGAAAGCTTGTGTCTTCTGCCTGGTG GCTGTTCATGCGGTAATTGGTGATGAACTAAAACCACATCTCAGTCAACTTACTGGCAGTAAAGTGGTGAGATCTGCTGAGGAAGCGGCA TCAGTGTTGGCCACTTCAATTAGTCCAGAGCAGTGCATCAAAGTGCTTTGTCCTATCATTCAAACTGCAGACTACCCAATTAATCTGGCT GCAATCAAAATGCAAACAAAAGTGATAGAGAGAGTGTCCAAGGAAACCCTAAACCTGCTTTTGCCAGAGATTATGCCAGGTCTAATACAG CCTACAATCAGGGCTTTGGCATTAAAGGTTTTAAGAGAAATCCTAAGGCATCAACCAGCAAGATTTAAAAACTATGCAGAATTGACTGTC ATGAAAACATTGGAAGCACATAAAGATCCTCATAAGGAGATCTTTCCCTAGATCATTCTGACCTAGTTGCAGAGTTGTTGAAGGAGCTGT CTAACCATAATGAGCGTGTAGAAGAAAGAAAAATTGCCCTCTATGAACTTATGAAACTGACACAGGAAGAATCTTTTAGTGTTTGGGATG AACACTTCAAAACAATATTGCTTTTATTGCTTGAAACGCTTGGAGATAAAGAGATGTGTGGTGGTCCTGGGATGTCTGACCCAAGAGCAG GAGGTGATGCTACTGACTCAAGTCAAACAGCTCTTGATAATAAAGCTTCATTGCTCCATTCAATGCCTACTCACTCCTCTCCACGCTCTC GAGACTATAATCCATATAACTATTCAGATAGCATCAGTCCCTTCAACAAGTCTGCCCTCAAGGAAGCCATGTTTGATGATGATGCTGACC AGTTTCCTGACGTGCATTTGATTATGACACAGAAAATATGAACTCTGAAGATATTTATAGCTCTCTTAGAGGTGTCACTGAAGCAATCCA GAATTTCAGCTTCCGTAGCCAAGAAGATATGAATGAGCCATTGAAAAGGGATTCTAAAAAAGATGATGGCGATTCAAGTTCCATGGGGAG TCCTTTGACAAGACCAACACCACGATCACCAGCTAACTGGTCCAGTCCTCTTACTTCTCCTACCAATACATCACAGAATACTTTATCTCC AAGGCAGCACAGTCAGTGCTGATTTCATTATTTGAACTCAATACCCCAGAGTTTACAATGTTATTAGGAGCTTTACCAAAAACTTTTCAG GATGGTGCTACCAAGCTTCTTCATAATCACCTTCGAAACACTGGCAATGGAACCCAGGTGAAGGTTGCTATCCTTAAATACATAGAAACT CTGGCCAAACAGATGGATCCAGGAGATTTTATAAATTCCAGTGAAACTCGCCTAGCAGTGTCTCGGGTCATCACTTGGACAACAGAACCC AAAAGTTCTGATGTTCGGAAGAGAGTCTTTTCCAAATGATCTTCAGTTCAATATTCTAATGAGATTTACAGTTGATCAGACCCAGACACC >In-frame_ENST00000376561_ENST00000307312_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(amino acids)=634AA_start in transcript=171_stop in transcript=2075 MWKASAGHAVSIAQDDAGADDWETDPDFVNDVSEKEQRWGAKTVQGSGHQEHINIHKLRENVFQEHQTLKEKELETGPKASHGYGGKFGV EQDRMDKSAVGHEYQSKLSKHCSQVDSVRGFGGKFGVQMDRVDQSAVGFEYQGKTEKHASQKDYSSGFGGKYGVQADRVDKSAVGFDYQG KTEKHESQRDYSKGFGGKYGIDKDKVDKSAVGFEYQGKTEKHESQKDYVKGFGGKFGVQTDRQDKCALGWDHQEKLQLHESQKDYSKGFG GKYGVQKDRMDKNASTFEDVTQVSSAYQKTVPVEAVTSKTSNIRANFENLAKEKEQEDRRKAEAERAQRMAKERQEQEEARRKLEEQARA KTQTPPVSPAPQPTEERLPSSPVYEDAASFKAELSYRGPVSGTEPEPVYSMEAADYREASSQQGLAYATEAVYESAEAPGHYPAEDSTYD EYENDLGITAVALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGVCKGRFRELAFSCVRVALVPIKCSRDLPGQARGLRSALWRVGRKD CPRRGASSRVSLLGRRGLGLMEVNPELSHPEHRSCHVRWEICLCHTVTARRIRKLISFLRSREAGPVPSCSQVGGVSFQKVTWKCLGTWV -------------------------------------------------------------- >In-frame_ENST00000376561_ENST00000480013_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(transcript)=5545nt_BP=2247nt AGAGCCTGGTGCCTGGGAGCGGCTGGCGCGGCGGAATCCAGGGCCGACCCGGGCCGGACCGACCCCAGGCGGCGACGGAATCAGTCCCCA ATGCCTGGAAATTCCTCATTGGATTACTGTGTTTTAAACAGAATTTCGTGAACAGCCTTTTATCTCCAAGCGGAAAGAAAGATGTGGAAA GCTTCAGCAGGCCACGCTGTGTCCATCGCCCAGGATGACGCGGGGGCCGATGACTGGGAGACCGACCCTGATTTTGTGAATGATGTGAGT GAGAAGGAGCAAAGATGGGGTGCCAAGACGGTGCAGGGCTCCGGGCACCAGGAGCATATCAACATACACAAGCTGAGGGAGAATGTCTTT CAAGAGCATCAGACCCTTAAGGAGAAGGAACTTGAAACAGGACCAAAAGCTTCCCATGGCTATGGAGGGAAATTTGGTGTGGAACAAGAC CGAATGGATAAGTCAGCTGTCGGCCACGAATATCAGTCGAAACTTTCCAAGCACTGCTCGCAGGTGGACTCGGTCCGTGGCTTCGGAGGC AAGTTTGGTGTCCAGATGGACAGAGTTGATCAGTCTGCTGTAGGCTTTGAATACCAGGGGAAGACTGAGAAGCATGCCTCCCAGAAAGAC TACTCCAGTGGTTTTGGCGGCAAGTATGGCGTGCAGGCCGACCGAGTAGACAAGAGCGCGGTGGGCTTCGACTACCAGGGCAAGACGGAG AAGCACGAGTCACAGAGAGATTACTCCAAAGGTTTCGGCGGCAAATACGGTATCGACAAGGACAAAGTGGATAAGAGCGCCGTTGGCTTT GAGTATCAAGGCAAAACGGAGAAGCACGAGTCCCAGAAAGACTATGTGAAAGGGTTTGGAGGAAAATTTGGTGTGCAGACAGACAGACAA GACAAATGTGCCCTTGGCTGGGATCACCAGGAGAAATTGCAGCTGCATGAATCCCAAAAAGACTACTCCAAAGGATTCGGCGGGAAGTAT GGGGTGCAGAAGGATCGGATGGATAAGAATGCGTCAACCTTTGAGGATGTCACCCAGGTGTCCTCTGCCTACCAGAAGACAGTACCTGTC GAAGCTGTGACCAGCAAAACAAGTAACATCAGAGCTAACTTTGAAAACCTCGCTAAGGAGAAAGAGCAGGAGGACAGGCGGAAGGCGGAG GCGGAGAGAGCCCAGCGGATGGCCAAGGAGCGGCAGGAGCAGGAAGAGGCCAGGAGGAAGCTGGAGGAGCAAGCCAGAGCCAAAACGCAA ACGCCCCCTGTGTCGCCCGCACCTCAGCCAACCGAGGAGAGGCTGCCCTCGAGCCCCGTCTATGAGGATGCGGCTTCCTTCAAGGCAGAG CTGAGCTACAGAGGCCCTGTGAGTGGGACGGAGCCGGAGCCCGTGTACAGCATGGAGGCCGCTGACTACCGAGAGGCCAGCAGCCAGCAG GGCCTGGCCTATGCCACAGAGGCTGTCTATGAAAGCGCAGAGGCCCCGGGCCACTATCCCGCAGAGGACAGCACCTACGATGAGTACGAG AACGATCTGGGGATCACAGCCGTCGCCCTGTACGACTACCAGGCTGCGGGCGATGATGAGATCTCATTTGACCCTGATGACATCATCACC AACATCGAGATGATTGACGACGGCTGGTGGCGCGGGGTGTGCAAGGGCCGCTTCAGGGAGCTCGCATTCTCTTGTGTTCGTGTTGCCCTC GTGCCCATCAAGTGCAGTCGGGACCTCCCAGGACAAGCACGAGGCCTCAGGTCGGCCCTGTGGCGGGTAGGCAGGAAGGACTGTCCCAGA CGAGGGGCTTCCTCTAGAGTCTCACTGCTGGGGAGGAGAGGACTGGGCCTGATGGAAGTTAACCCGGAGCTAAGTCACCCAGAGCACAGG AGCTGCCATGTCAGATGGGAAATCTGCCTATGTCATACCGTGACAGCCCGCAGGATCAGGAAACTCATCTCCTTCCTGAGGAGCCGGGAG GCTGGACCAGTCCCGTCGTGCAGTCAGGTGGGCGGTGTGTCTTTCCAGAAGGTCACGTGGAAATGTCTCGGGACTTGGGTCCCGGAGTGC CCGTGAAGCGTGTTTTTGCTCCTGAGGTGCATTTTCTCATCATCCTTGCTTTACCACAATGAGCAATGAGGTCGGGTTTTATATGCAACT TATTGTATCTGAATTCCTGTAGCACACCTCATAGGTATGATTTTTTTAAATTAAAGAATTCAGAATAAACATTTTTTGATCCACTTGATG AAGCTACTGAATCTTTACATCAAACGTGCACAAACAGGTTCTGGAGGAGCTGATCCCACTACTGATGTTTCTGGACAAAGTTAGTGAAGC TCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAACT TACTATTGTTTCCCAGTTTTAGTTTTTTGTTTCGTTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTTTA TGATAGTTATTCCAAATTCAAGAAGAAGCAGTATTAACATCAATTGATCGACACAAAGTAATTTTTAATTTAATTCATCATTTCACATGT TTGTACTTTGTCTTCCCATTAACCTTTGCCAGTGTTATGATTGTATAAATTTTTTTAAATGCTGGTTAAACAGGAATGCTTAAAGCTTTA AAAGTTTAACAGTCTAAAACATTTTTGCTTTTATTCAACTGCAGAATAATATTTTTATTGCTACTTTGAGTTTTGTTTCGTATCATGTCC TATGCTAGAAATATTTAAATGATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCAT TAGTTGCAACTTCTTTGGGGTGATCTATAGTTTGAAAACTAAAACCTCAAAGACAGATGTTACAGAATCAGCCAGTTCTGTAAAACTGAT ATTGTCTATTGGTTATTGATCTTGCCATCTTTATTTAAAACCATGTCCCTTCTATGATCCCTTAAGAAAGCTGCACCAAATCATCTGCCT GTTTTTTCTTGATACTTACTGAAATAGAAGGTTTTATTGCAGGGTTTATTTTGGTTTGTTTATATCTTTGTTGTGAATGATGCTTTTTTG TATTTATTAATATCAAATTCACTTATGAATAAACTTGATAATGGAAACGGACAAAAAAAATCAAGTGCGTGTGTGTCCTTGACCGTCTTC TGTTTCTCACGTAATAAACAAATTATCGAGACATGGGAGTGACCAGCACCTTTTCTTTAAATGGTGGAACCTGGTTTCCTTTTACCATGA AATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGGCTGTCTTTGTATAATGGGCTCAAATTCTCTACCTCTT CAGGGCTAATACTTTTAACTGAGCTGCTGCCTATAGTGTCTTTTGGAAAACTACTTAAAGGGTGATTTTCTGTTACTTTTTAGCAAATTT TTTTAATCACCTCTTGCTACACCCATTCTTTTCATGTGCAGCCGACTCAAAAATTACCAGTTTTGGTGAAAGGCTAAATTAGATAATTTG GAACCAGGATACTAATGATTTCTCATCTTTACTTTTTTTTAATCCTAATATAAAGTGAATTTGATTGAAAAGGCAAATAGCTATTAGGGA AGCAGTTTGCCATTGTTGCAGAGTTATCTGTACTTTGTTTAACTGAAAAAAATGTAGAAATATATGTAAAGAATTTAAGACAAGAGTACT GAATGGATGATTTGTCATAGGCTTTCCCCTTTCTTTCTGTTCTAGCAGCAGGAAAAGTTTCTCTATATCCTCTCCCTCTACCTGTAACAA TTTTGTTTTCTACTGTTAATTACATTGTGTATTTATAGTTCTATGCTTACTGTTGTGCATATACTGGCAATAAAACTGTACATAACATTA CTTGAAAAAGTTGGTTATGATAATTCAGAGAGCAGTGTTCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTTCATGCGGTAATTGGTGAT GAACTAAAACCACATCTCAGTCAACTTACTGGCAGTAAAGTGGTGAGATCTGCTGAGGAAGCGGCATCAGTGTTGGCCACTTCAATTAGT CCAGAGCAGTGCATCAAAGTGCTTTGTCCTATCATTCAAACTGCAGACTACCCAATTAATCTGGCTGCAATCAAAATGCAAACAAAAGTG ATAGAGAGAGTGTCCAAGGAAACCCTAAACCTGCTTTTGCCAGAGATTATGCCAGGTCTAATACAGCCTACAATCAGGGCTTTGGCATTA AAGGTTTTAAGAGAAATCCTAAGGCATCAACCAGCAAGATTTAAAAACTATGCAGAATTGACTGTCATGAAAACATTGGAAGCACATAAA GATCCTCATAAGGAGATCTTTCCCTAGATCATTCTGACCTAGTTGCAGAGTTGTTGAAGGAGCTGTCTAACCATAATGAGCGTGTAGAAG AAAGAAAAATTGCCCTCTATGAACTTATGAAACTGACACAGGAAGAATCTTTTAGTGTTTGGGATGAACACTTCAAAACAATATTGCTTT TATTGCTTGAAACGCTTGGAGATAAAGAGATGTGTGGTGGTCCTGGGATGTCTGACCCAAGAGCAGGAGGTGATGCTACTGACTCAAGTC AAACAGCTCTTGATAATAAAGCTTCATTGCTCCATTCAATGCCTACTCACTCCTCTCCACGCTCTCGAGACTATAATCCATATAACTATT CAGATAGCATCAGTCCCTTCAACAAGTCTGCCCTCAAGGAAGCCATGTTTGATGATGATGCTGACCAGTTTCCTGACGTGCATTTGATTA TGACACAGAAAATATGAACTCTGAAGATATTTATAGCTCTCTTAGAGGTGTCACTGAAGCAATCCAGAATTTCAGCTTCCGTAGCCAAGA AGATATGAATGAGCCATTGAAAAGGGATTCTAAAAAAGATGATGGCGATTCAAGTTCCATGGGGAGTCCTTTGACAAGACCAACACCACG ATCACCAGCTAACTGGTCCAGTCCTCTTACTTCTCCTACCAATACATCACAGAATACTTTATCTCCAAGGCAGCACAGTCAGTGCTGATT TCATTATTTGAACTCAATACCCCAGAGTTTACAATGTTATTAGGAGCTTTACCAAAAACTTTTCAGGATGGTGCTACCAAGCTTCTTCAT AATCACCTTCGAAACACTGGCAATGGAACCCAGGTGAAGGTTGCTATCCTTAAATACATAGAAACTCTGGCCAAACAGATGGATCCAGGA GATTTTATAAATTCCAGTGAAACTCGCCTAGCAGTGTCTCGGGTCATCACTTGGACAACAGAACCCAAAAGTTCTGATGTTCGGAAGAGA GTCTTTTCCAAATGATCTTCAGTTCAATATTCTAATGAGATTTACAGTTGATCAGACCCAGACACCAAGCTTAAAGAAAAAAAATGGGTG >In-frame_ENST00000376561_ENST00000480013_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(amino acids)=634AA_start in transcript=171_stop in transcript=2075 MWKASAGHAVSIAQDDAGADDWETDPDFVNDVSEKEQRWGAKTVQGSGHQEHINIHKLRENVFQEHQTLKEKELETGPKASHGYGGKFGV EQDRMDKSAVGHEYQSKLSKHCSQVDSVRGFGGKFGVQMDRVDQSAVGFEYQGKTEKHASQKDYSSGFGGKYGVQADRVDKSAVGFDYQG KTEKHESQRDYSKGFGGKYGIDKDKVDKSAVGFEYQGKTEKHESQKDYVKGFGGKFGVQTDRQDKCALGWDHQEKLQLHESQKDYSKGFG GKYGVQKDRMDKNASTFEDVTQVSSAYQKTVPVEAVTSKTSNIRANFENLAKEKEQEDRRKAEAERAQRMAKERQEQEEARRKLEEQARA KTQTPPVSPAPQPTEERLPSSPVYEDAASFKAELSYRGPVSGTEPEPVYSMEAADYREASSQQGLAYATEAVYESAEAPGHYPAEDSTYD EYENDLGITAVALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGVCKGRFRELAFSCVRVALVPIKCSRDLPGQARGLRSALWRVGRKD CPRRGASSRVSLLGRRGLGLMEVNPELSHPEHRSCHVRWEICLCHTVTARRIRKLISFLRSREAGPVPSCSQVGGVSFQKVTWKCLGTWV -------------------------------------------------------------- >In-frame_ENST00000376561_ENST00000461133_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(transcript)=4783nt_BP=2247nt AGAGCCTGGTGCCTGGGAGCGGCTGGCGCGGCGGAATCCAGGGCCGACCCGGGCCGGACCGACCCCAGGCGGCGACGGAATCAGTCCCCA ATGCCTGGAAATTCCTCATTGGATTACTGTGTTTTAAACAGAATTTCGTGAACAGCCTTTTATCTCCAAGCGGAAAGAAAGATGTGGAAA GCTTCAGCAGGCCACGCTGTGTCCATCGCCCAGGATGACGCGGGGGCCGATGACTGGGAGACCGACCCTGATTTTGTGAATGATGTGAGT GAGAAGGAGCAAAGATGGGGTGCCAAGACGGTGCAGGGCTCCGGGCACCAGGAGCATATCAACATACACAAGCTGAGGGAGAATGTCTTT CAAGAGCATCAGACCCTTAAGGAGAAGGAACTTGAAACAGGACCAAAAGCTTCCCATGGCTATGGAGGGAAATTTGGTGTGGAACAAGAC CGAATGGATAAGTCAGCTGTCGGCCACGAATATCAGTCGAAACTTTCCAAGCACTGCTCGCAGGTGGACTCGGTCCGTGGCTTCGGAGGC AAGTTTGGTGTCCAGATGGACAGAGTTGATCAGTCTGCTGTAGGCTTTGAATACCAGGGGAAGACTGAGAAGCATGCCTCCCAGAAAGAC TACTCCAGTGGTTTTGGCGGCAAGTATGGCGTGCAGGCCGACCGAGTAGACAAGAGCGCGGTGGGCTTCGACTACCAGGGCAAGACGGAG AAGCACGAGTCACAGAGAGATTACTCCAAAGGTTTCGGCGGCAAATACGGTATCGACAAGGACAAAGTGGATAAGAGCGCCGTTGGCTTT GAGTATCAAGGCAAAACGGAGAAGCACGAGTCCCAGAAAGACTATGTGAAAGGGTTTGGAGGAAAATTTGGTGTGCAGACAGACAGACAA GACAAATGTGCCCTTGGCTGGGATCACCAGGAGAAATTGCAGCTGCATGAATCCCAAAAAGACTACTCCAAAGGATTCGGCGGGAAGTAT GGGGTGCAGAAGGATCGGATGGATAAGAATGCGTCAACCTTTGAGGATGTCACCCAGGTGTCCTCTGCCTACCAGAAGACAGTACCTGTC GAAGCTGTGACCAGCAAAACAAGTAACATCAGAGCTAACTTTGAAAACCTCGCTAAGGAGAAAGAGCAGGAGGACAGGCGGAAGGCGGAG GCGGAGAGAGCCCAGCGGATGGCCAAGGAGCGGCAGGAGCAGGAAGAGGCCAGGAGGAAGCTGGAGGAGCAAGCCAGAGCCAAAACGCAA ACGCCCCCTGTGTCGCCCGCACCTCAGCCAACCGAGGAGAGGCTGCCCTCGAGCCCCGTCTATGAGGATGCGGCTTCCTTCAAGGCAGAG CTGAGCTACAGAGGCCCTGTGAGTGGGACGGAGCCGGAGCCCGTGTACAGCATGGAGGCCGCTGACTACCGAGAGGCCAGCAGCCAGCAG GGCCTGGCCTATGCCACAGAGGCTGTCTATGAAAGCGCAGAGGCCCCGGGCCACTATCCCGCAGAGGACAGCACCTACGATGAGTACGAG AACGATCTGGGGATCACAGCCGTCGCCCTGTACGACTACCAGGCTGCGGGCGATGATGAGATCTCATTTGACCCTGATGACATCATCACC AACATCGAGATGATTGACGACGGCTGGTGGCGCGGGGTGTGCAAGGGCCGCTTCAGGGAGCTCGCATTCTCTTGTGTTCGTGTTGCCCTC GTGCCCATCAAGTGCAGTCGGGACCTCCCAGGACAAGCACGAGGCCTCAGGTCGGCCCTGTGGCGGGTAGGCAGGAAGGACTGTCCCAGA CGAGGGGCTTCCTCTAGAGTCTCACTGCTGGGGAGGAGAGGACTGGGCCTGATGGAAGTTAACCCGGAGCTAAGTCACCCAGAGCACAGG AGCTGCCATGTCAGATGGGAAATCTGCCTATGTCATACCGTGACAGCCCGCAGGATCAGGAAACTCATCTCCTTCCTGAGGAGCCGGGAG GCTGGACCAGTCCCGTCGTGCAGTCAGGTGGGCGGTGTGTCTTTCCAGAAGGTCACGTGGAAATGTCTCGGGACTTGGGTCCCGGAGTGC CCGTGAAGCGTGTTTTTGCTCCTGAGGTGCATTTTCTCATCATCCTTGCTTTACCACAATGAGCAATGAGGTCGGGTTTTATATGCAACT TATTGTATCTGAATTCCTGTAGCACACCTCATAGGTATGATTTTTTTAAATTAAAGAATTCAGAATAAACATTTTTTGATCCACTTGATG AAGCTACTGAATCTTTACATCAAACGTGCACAAACAGGTTCTGGAGGAGCTGATCCCACTACTGATGTTTCTGGACAAAGTTAGTGAAGC TCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAACT TACTATTGTTTCCCAGTTTTAGTTTTTTGTTTCGTTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTTTA TGATAGTTATTCCAAATTCAAGAAGAAGCAGTATTAACATCAATTGATCGACACAAAGTAATTTTTAATTTAATTCATCATTTCACATGT TTGTACTTTGTCTTCCCATTAACCTTTGCCAGTGTTATGATTGTATAAATTTTTTTAAATGCTGGTTAAACAGGAATGCTTAAAGCTTTA AAAGTTTAACAGTCTAAAACATTTTTGCTTTTATTCAACTGCAGAATAATATTTTTATTGCTACTTTGAGTTTTGTTTCGTATCATGTCC TATGCTAGAAATATTTAAATGATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCAT TAGTTGCAACTTCTTTGGGGTGATCTATAGTTTGAAAACTAAAACCTCAAAGACAGATGTTACAGAATCAGCCAGTTCTGTAAAACTGAT ATTGTCTATTGGTTATTGATCTTGCCATCTTTATTTAAAACCATGTCCCTTCTATGATCCCTTAAGAAAGCTGCACCAAATCATCTGCCT GTTTTTTCTTGATACTTACTGAAATAGAAGGTTTTATTGCAGGGTTTATTTTGGTTTGTTTATATCTTTGTTGTGAATGATGCTTTTTTG TATTTATTAATATCAAATTCACTTATGAATAAACTTGATAATGGAAACGGACAAAAAAAAGGTTATGATAATTCAGAGAGCAGTGTTCGG AAAGCTTGTGTCTTCTGCCTGGTGGCTGTTCATGCGGTAATTGGTGATGAACTAAAACCACATCTCAGTCAACTTACTGGCAGTAAAGTG GTGAGATCTGCTGAGGAAGCGGCATCAGTGTTGGCCACTTCAATTAGTCCAGAGCAGTGCATCAAAGTGCTTTGTCCTATCATTCAAACT GCAGACTACCCAATTAATCTGGCTGCAATCAAAATGCAAACAAAAGTGATAGAGAGAGTGTCCAAGGAAACCCTAAACCTGCTTTTGCCA GAGATTATGCCAGGTCTAATACAGCCTACAATCAGGGCTTTGGCATTAAAGGTTTTAAGAGAAATCCTAAGGCATCAACCAGCAAGATTT AAAAACTATGCAGAATTGACTGTCATGAAAACATTGGAAGCACATAAAGATCCTCATAAGGAGATCTTTCCCTAGATCATTCTGACCTAG TTGCAGAGTTGTTGAAGGAGCTGTCTAACCATAATGAGCGTGTAGAAGAAAGAAAAATTGCCCTCTATGAACTTATGAAACTGACACAGG AAGAATCTTTTAGTGTTTGGGATGAACACTTCAAAACAATATTGCTTTTATTGCTTGAAACGCTTGGAGATAAAGAGATGTGTGGTGGTC CTGGGATGTCTGACCCAAGAGCAGGAGGTGATGCTACTGACTCAAGTCAAACAGCTCTTGATAATAAAGCTTCATTGCTCCATTCAATGC CTACTCACTCCTCTCCACGCTCTCGAGACTATAATCCATATAACTATTCAGATAGCATCAGTCCCTTCAACAAGTCTGCCCTCAAGGAAG CCATGTTTGATGATGATGCTGACCAGTTTCCTGACGTGCATTTGATTATGACACAGAAAATATGAACTCTGAAGATATTTATAGCTCTCT TAGAGGTGTCACTGAAGCAATCCAGAATTTCAGCTTCCGTAGCCAAGAAGATATGAATGAGCCATTGAAAAGGGATTCTAAAAAAGATGA TGGCGATTCAAGTTCCATGGGGAGTCCTTTGACAAGACCAACACCACGATCACCAGCTAACTGGTCCAGTCCTCTTACTTCTCCTACCAA TACATCACAGAATACTTTATCTCCAAGGCAGCACAGTCAGTGCTGATTTCATTATTTGAACTCAATACCCCAGAGTTTACAATGTTATTA GGAGCTTTACCAAAAACTTTTCAGGATGGTGCTACCAAGCTTCTTCATAATCACCTTCGAAACACTGGCAATGGAACCCAGGTGAAGGTT GCTATCCTTAAATACATAGAAACTCTGGCCAAACAGATGGATCCAGGAGATTTTATAAATTCCAGTGAAACTCGCCTAGCAGTGTCTCGG GTCATCACTTGGACAACAGAACCCAAAAGTTCTGATGTTCGGAAGAGAGTCTTTTCCAAATGATCTTCAGTTCAATATTCTAATGAGATT TACAGTTGATCAGACCCAGACACCAAGCTTAAAGAAAAAAAATGGGTGCTGATTTGCTTGGATCTGTTCAGGCAAAAGTTCAGAAAGCCC >In-frame_ENST00000376561_ENST00000461133_TCGA-ER-A19T-01A_CTTN_chr11_70282681_-_CLASP2_chr3_33602368_length(amino acids)=634AA_start in transcript=171_stop in transcript=2075 MWKASAGHAVSIAQDDAGADDWETDPDFVNDVSEKEQRWGAKTVQGSGHQEHINIHKLRENVFQEHQTLKEKELETGPKASHGYGGKFGV EQDRMDKSAVGHEYQSKLSKHCSQVDSVRGFGGKFGVQMDRVDQSAVGFEYQGKTEKHASQKDYSSGFGGKYGVQADRVDKSAVGFDYQG KTEKHESQRDYSKGFGGKYGIDKDKVDKSAVGFEYQGKTEKHESQKDYVKGFGGKFGVQTDRQDKCALGWDHQEKLQLHESQKDYSKGFG GKYGVQKDRMDKNASTFEDVTQVSSAYQKTVPVEAVTSKTSNIRANFENLAKEKEQEDRRKAEAERAQRMAKERQEQEEARRKLEEQARA KTQTPPVSPAPQPTEERLPSSPVYEDAASFKAELSYRGPVSGTEPEPVYSMEAADYREASSQQGLAYATEAVYESAEAPGHYPAEDSTYD EYENDLGITAVALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGVCKGRFRELAFSCVRVALVPIKCSRDLPGQARGLRSALWRVGRKD CPRRGASSRVSLLGRRGLGLMEVNPELSHPEHRSCHVRWEICLCHTVTARRIRKLISFLRSREAGPVPSCSQVGGVSFQKVTWKCLGTWV -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for CTTN-CLASP2 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| Tgene | CLASP2 | chr11:70282681 | chr3:33602368 | ENST00000313350 | 0 | 13 | 444_580 | 0 | 432.0 | microtubules%2C MAPRE1 and MAPRE3 | |
| Tgene | CLASP2 | chr11:70282681 | chr3:33602368 | ENST00000313350 | 0 | 13 | 872_1294 | 0 | 432.0 | RSN and localization to the Golgi and kinetochores |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for CTTN-CLASP2 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for CTTN-CLASP2 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Hgene | CTTN | C0007137 | Squamous cell carcinoma | 1 | CTD_human |
| Hgene | CTTN | C0023531 | Leukoplakia | 1 | CTD_human |
| Hgene | CTTN | C0087031 | Juvenile-Onset Still Disease | 1 | CTD_human |
| Hgene | CTTN | C1704317 | Leukokeratosis | 1 | CTD_human |
| Hgene | CTTN | C3495559 | Juvenile arthritis | 1 | CTD_human |
| Hgene | CTTN | C3714758 | Juvenile psoriatic arthritis | 1 | CTD_human |
| Hgene | CTTN | C4552091 | Polyarthritis, Juvenile, Rheumatoid Factor Negative | 1 | CTD_human |
| Hgene | CTTN | C4704862 | Polyarthritis, Juvenile, Rheumatoid Factor Positive | 1 | CTD_human |
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