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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:DMTF1-SEMA3D (FusionGDB2 ID:23246) |
Fusion Gene Summary for DMTF1-SEMA3D |
Fusion gene summary |
Fusion gene information | Fusion gene name: DMTF1-SEMA3D | Fusion gene ID: 23246 | Hgene | Tgene | Gene symbol | DMTF1 | SEMA3D | Gene ID | 9988 | 223117 |
Gene name | cyclin D binding myb like transcription factor 1 | semaphorin 3D | |
Synonyms | DMP1|DMTF|MRUL|hDMP1 | Sema-Z2|coll-2 | |
Cytomap | 7q21.12 | 7q21.11 | |
Type of gene | protein-coding | protein-coding | |
Description | cyclin-D-binding Myb-like transcription factor 1cyclin D-binding Myb-like proteincyclin-D-interacting Myb-like protein 1hDMTF1 | semaphorin-3Dcollapsin 2sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | Q9Y222 | . | |
Ensembl transtripts involved in fusion gene | ENST00000394702, ENST00000331242, ENST00000413276, ENST00000411766, ENST00000432937, ENST00000394703, ENST00000580710, ENST00000414194, | ENST00000284136, ENST00000444867, ENST00000484038, | |
Fusion gene scores | * DoF score | 5 X 5 X 5=125 | 3 X 3 X 3=27 |
# samples | 5 | 3 | |
** MAII score | log2(5/125*10)=-1.32192809488736 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/27*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: DMTF1 [Title/Abstract] AND SEMA3D [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | DMTF1(86800405)-SEMA3D(84702397), # samples:5 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene breakpoints across DMTF1 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across SEMA3D (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | LGG | TCGA-FG-5963-01A | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - |
ChimerDB4 | LGG | TCGA-FG-5963 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - |
ChimerDB4 | LGG | TCGA-FG-5963 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - |
ChimerDB4 | LGG | TCGA-FG-5963-01A | DMTF1 | chr7 | 86800405 | - | SEMA3D | chr7 | 84702397 | - |
ChimerDB4 | LGG | TCGA-FG-5963-02A | DMTF1 | chr7 | 86800405 | - | SEMA3D | chr7 | 84702397 | - |
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Fusion Gene ORF analysis for DMTF1-SEMA3D |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000394702 | ENST00000284136 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - |
In-frame | ENST00000394702 | ENST00000444867 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - |
5CDS-intron | ENST00000394702 | ENST00000484038 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - |
In-frame | ENST00000331242 | ENST00000284136 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - |
In-frame | ENST00000331242 | ENST00000444867 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - |
5CDS-intron | ENST00000331242 | ENST00000484038 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - |
In-frame | ENST00000413276 | ENST00000284136 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - |
In-frame | ENST00000413276 | ENST00000444867 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - |
5CDS-intron | ENST00000413276 | ENST00000484038 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - |
In-frame | ENST00000411766 | ENST00000284136 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - |
In-frame | ENST00000411766 | ENST00000444867 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - |
5CDS-intron | ENST00000411766 | ENST00000484038 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - |
In-frame | ENST00000432937 | ENST00000284136 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - |
In-frame | ENST00000432937 | ENST00000444867 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - |
5CDS-intron | ENST00000432937 | ENST00000484038 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - |
In-frame | ENST00000394703 | ENST00000284136 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - |
In-frame | ENST00000394703 | ENST00000444867 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - |
5CDS-intron | ENST00000394703 | ENST00000484038 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - |
intron-3CDS | ENST00000580710 | ENST00000284136 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - |
intron-3CDS | ENST00000580710 | ENST00000444867 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - |
intron-intron | ENST00000580710 | ENST00000484038 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - |
5UTR-3CDS | ENST00000414194 | ENST00000284136 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - |
5UTR-3CDS | ENST00000414194 | ENST00000444867 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - |
5UTR-intron | ENST00000414194 | ENST00000484038 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000394702 | DMTF1 | chr7 | 86800405 | + | ENST00000284136 | SEMA3D | chr7 | 84702397 | - | 6499 | 653 | 320 | 2611 | 763 |
ENST00000394702 | DMTF1 | chr7 | 86800405 | + | ENST00000444867 | SEMA3D | chr7 | 84702397 | - | 1533 | 653 | 320 | 1162 | 280 |
ENST00000331242 | DMTF1 | chr7 | 86800405 | + | ENST00000284136 | SEMA3D | chr7 | 84702397 | - | 6499 | 653 | 320 | 2611 | 763 |
ENST00000331242 | DMTF1 | chr7 | 86800405 | + | ENST00000444867 | SEMA3D | chr7 | 84702397 | - | 1533 | 653 | 320 | 1162 | 280 |
ENST00000413276 | DMTF1 | chr7 | 86800405 | + | ENST00000284136 | SEMA3D | chr7 | 84702397 | - | 6451 | 605 | 272 | 2563 | 763 |
ENST00000413276 | DMTF1 | chr7 | 86800405 | + | ENST00000444867 | SEMA3D | chr7 | 84702397 | - | 1485 | 605 | 272 | 1114 | 280 |
ENST00000411766 | DMTF1 | chr7 | 86800405 | + | ENST00000284136 | SEMA3D | chr7 | 84702397 | - | 6311 | 465 | 255 | 2423 | 722 |
ENST00000411766 | DMTF1 | chr7 | 86800405 | + | ENST00000444867 | SEMA3D | chr7 | 84702397 | - | 1345 | 465 | 255 | 974 | 239 |
ENST00000432937 | DMTF1 | chr7 | 86800405 | + | ENST00000284136 | SEMA3D | chr7 | 84702397 | - | 6275 | 429 | 267 | 2387 | 706 |
ENST00000432937 | DMTF1 | chr7 | 86800405 | + | ENST00000444867 | SEMA3D | chr7 | 84702397 | - | 1309 | 429 | 267 | 938 | 223 |
ENST00000394703 | DMTF1 | chr7 | 86800405 | + | ENST00000284136 | SEMA3D | chr7 | 84702397 | - | 6736 | 890 | 557 | 2848 | 763 |
ENST00000394703 | DMTF1 | chr7 | 86800405 | + | ENST00000444867 | SEMA3D | chr7 | 84702397 | - | 1770 | 890 | 557 | 1399 | 280 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000394702 | ENST00000284136 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - | 0.000278656 | 0.99972135 |
ENST00000394702 | ENST00000444867 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - | 0.001792934 | 0.9982071 |
ENST00000331242 | ENST00000284136 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - | 0.000278656 | 0.99972135 |
ENST00000331242 | ENST00000444867 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - | 0.001792934 | 0.9982071 |
ENST00000413276 | ENST00000284136 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - | 0.000276513 | 0.9997235 |
ENST00000413276 | ENST00000444867 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - | 0.001715356 | 0.99828464 |
ENST00000411766 | ENST00000284136 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - | 0.00020522 | 0.9997948 |
ENST00000411766 | ENST00000444867 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - | 0.003506745 | 0.9964933 |
ENST00000432937 | ENST00000284136 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - | 0.000118785 | 0.99988115 |
ENST00000432937 | ENST00000444867 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - | 0.001370387 | 0.9986297 |
ENST00000394703 | ENST00000284136 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - | 0.000310376 | 0.9996897 |
ENST00000394703 | ENST00000444867 | DMTF1 | chr7 | 86800405 | + | SEMA3D | chr7 | 84702397 | - | 0.001888634 | 0.99811137 |
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Fusion Genomic Features for DMTF1-SEMA3D |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for DMTF1-SEMA3D |
Go to FGviewer for the breakpoints of chr7:86800405-chr7:84702397 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
DMTF1 | . |
FUNCTION: Transcriptional activator which activates the CDKN2A/ARF locus in response to Ras-Raf signaling, thereby promoting p53/TP53-dependent growth arrest (By similarity). Binds to the consensus sequence 5'-CCCG[GT]ATGT-3' (By similarity). Isoform 1 may cooperate with MYB to activate transcription of the ANPEP gene. Isoform 2 may antagonize transcriptional activation by isoform 1. {ECO:0000250, ECO:0000269|PubMed:12917399}. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | SEMA3D | chr7:86800405 | chr7:84702397 | ENST00000284136 | 2 | 17 | 739_773 | 125.0 | 778.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
Tgene | SEMA3D | chr7:86800405 | chr7:84702397 | ENST00000284136 | 2 | 17 | 533_585 | 125.0 | 778.0 | Domain | Note=PSI | |
Tgene | SEMA3D | chr7:86800405 | chr7:84702397 | ENST00000284136 | 2 | 17 | 592_680 | 125.0 | 778.0 | Domain | Note=Ig-like C2-type |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000331242 | + | 5 | 18 | 306_329 | 109.0 | 761.0 | DNA binding | H-T-H motif |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000394702 | + | 5 | 10 | 306_329 | 109.0 | 286.0 | DNA binding | H-T-H motif |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000394703 | + | 7 | 20 | 306_329 | 109.0 | 761.0 | DNA binding | H-T-H motif |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000411766 | + | 4 | 10 | 306_329 | 68.0 | 230.0 | DNA binding | H-T-H motif |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000432937 | + | 4 | 17 | 306_329 | 21.0 | 673.0 | DNA binding | H-T-H motif |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000331242 | + | 5 | 18 | 225_263 | 109.0 | 761.0 | Domain | Myb-like 1 |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000331242 | + | 5 | 18 | 268_333 | 109.0 | 761.0 | Domain | HTH myb-type |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000331242 | + | 5 | 18 | 339_388 | 109.0 | 761.0 | Domain | Myb-like 2 |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000394702 | + | 5 | 10 | 225_263 | 109.0 | 286.0 | Domain | Myb-like 1 |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000394702 | + | 5 | 10 | 268_333 | 109.0 | 286.0 | Domain | HTH myb-type |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000394702 | + | 5 | 10 | 339_388 | 109.0 | 286.0 | Domain | Myb-like 2 |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000394703 | + | 7 | 20 | 225_263 | 109.0 | 761.0 | Domain | Myb-like 1 |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000394703 | + | 7 | 20 | 268_333 | 109.0 | 761.0 | Domain | HTH myb-type |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000394703 | + | 7 | 20 | 339_388 | 109.0 | 761.0 | Domain | Myb-like 2 |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000411766 | + | 4 | 10 | 225_263 | 68.0 | 230.0 | Domain | Myb-like 1 |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000411766 | + | 4 | 10 | 268_333 | 68.0 | 230.0 | Domain | HTH myb-type |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000411766 | + | 4 | 10 | 339_388 | 68.0 | 230.0 | Domain | Myb-like 2 |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000432937 | + | 4 | 17 | 225_263 | 21.0 | 673.0 | Domain | Myb-like 1 |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000432937 | + | 4 | 17 | 268_333 | 21.0 | 673.0 | Domain | HTH myb-type |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000432937 | + | 4 | 17 | 339_388 | 21.0 | 673.0 | Domain | Myb-like 2 |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000331242 | + | 5 | 18 | 459_760 | 109.0 | 761.0 | Region | Required for transcriptional activation |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000331242 | + | 5 | 18 | 87_170 | 109.0 | 761.0 | Region | Required for transcriptional activation |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000331242 | + | 5 | 18 | 87_458 | 109.0 | 761.0 | Region | Required for DNA-binding |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000394702 | + | 5 | 10 | 459_760 | 109.0 | 286.0 | Region | Required for transcriptional activation |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000394702 | + | 5 | 10 | 87_170 | 109.0 | 286.0 | Region | Required for transcriptional activation |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000394702 | + | 5 | 10 | 87_458 | 109.0 | 286.0 | Region | Required for DNA-binding |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000394703 | + | 7 | 20 | 459_760 | 109.0 | 761.0 | Region | Required for transcriptional activation |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000394703 | + | 7 | 20 | 87_170 | 109.0 | 761.0 | Region | Required for transcriptional activation |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000394703 | + | 7 | 20 | 87_458 | 109.0 | 761.0 | Region | Required for DNA-binding |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000411766 | + | 4 | 10 | 459_760 | 68.0 | 230.0 | Region | Required for transcriptional activation |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000411766 | + | 4 | 10 | 87_170 | 68.0 | 230.0 | Region | Required for transcriptional activation |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000411766 | + | 4 | 10 | 87_458 | 68.0 | 230.0 | Region | Required for DNA-binding |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000432937 | + | 4 | 17 | 459_760 | 21.0 | 673.0 | Region | Required for transcriptional activation |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000432937 | + | 4 | 17 | 87_170 | 21.0 | 673.0 | Region | Required for transcriptional activation |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000432937 | + | 4 | 17 | 87_458 | 21.0 | 673.0 | Region | Required for DNA-binding |
Tgene | SEMA3D | chr7:86800405 | chr7:84702397 | ENST00000284136 | 2 | 17 | 44_531 | 125.0 | 778.0 | Domain | Sema |
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Fusion Gene Sequence for DMTF1-SEMA3D |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000394702_ENST00000284136_TCGA-FG-5963-01A_DMTF1_chr7_86800405_+_SEMA3D_chr7_84702397_length(transcript)=6499nt_BP=653nt AGCGGGACAGACGAGCGGGAGGGGCAGCGTGCGGGGAGCTGGGGGCGGGGCGCGGCCGCAGCTCCGTTTCCGGTGGCTCGTCGCGCTCGC TCACTCCAGCTGCAGCCACTCTCGCCCGTGGCTGCTTCCTCCATCCTGGTATTTTTTGGAGCTTCCATCCTGGTTCTTCCAAAGTGCCCG GACCCAAAACAGGAAAGTGTTGCGGAGATAGGAACATGGGAGAGAAACAATCTGGGTAACATGAAAGTGATGCTGGTTGCTAAGGGAAGG CAACTTGATTCTGTGGGAAGGGCTGTAGCTGATCCATCCGTTGTCTAGATTTGAGTATGAGCACAGTGGAAGAGGATTCTGACACAGTAA CAGTAGAAACTGTGAACTCTGTGACTTTGACTCAGGACACAGAAGGGAATCTCATTCTTCACTGCCCTCAGAATGAAGCGGATGAAATAG ACTCAGAAGATAGTATTGAACCTCCACATAAAAGGCTTTGTTTGTCCTCTGAGGATGATCAGAGTATTGATGATTCTACTCCTTGCATAT CAGTTGTTGCACTTCCACTTTCAGAAAATGATCAGAGCTTTGAAGTGACCATGACTGCAACCACAGAAGTAGCAGATGATGAGGTTACTG AGGGGACTGTGACACAGATACAGACAGAATGTGCAAATTTCATCAGAGTACTTCAGCCCTATAACAAAACTCACATATATGTGTGTGGAA CTGGAGCATTTCATCCAATATGTGGGTATATTGATCTTGGAGTCTACAAGGAGGATATTATATTCAAACTAGACACACATAATTTGGAGT CTGGCAGACTGAAATGTCCTTTCGATCCTCAGCAGCCTTTTGCTTCAGTAATGACAGATGAGTACCTCTACTCTGGAACAGCTTCTGATT TCCTTGGCAAAGATACTGCATTCACTCGATCCCTTGGGCCTACTCATGACCACCACTACATCAGAACTGACATTTCAGAGCACTACTGGC TCAATGGAGCAAAATTTATTGGAACTTTCTTCATACCAGACACCTACAATCCAGATGATGATAAAATATATTTCTTCTTTCGTGAATCAT CTCAAGAAGGCAGTACCTCCGATAAAACCATCCTTTCTCGAGTTGGAAGAGTTTGTAAGAATGATGTAGGAGGACAACGCAGCCTGATAA ACAAGTGGACGACTTTTCTTAAGGCCAGACTGATTTGCTCAATTCCTGGAAGTGATGGGGCAGATACTTACTTTGATGAGCTTCAAGATA TTTATTTACTCCCCACAAGAGATGAAAGAAATCCTGTAGTATATGGAGTCTTTACTACAACCAGCTCCATCTTCAAAGGCTCTGCTGTTT GTGTGTATAGCATGGCTGACATCAGAGCAGTTTTTAATGGTCCATATGCTCATAAGGAAAGTGCAGACCATCGTTGGGTGCAGTATGATG GGAGAATTCCTTATCCACGGCCTGGTACATGTCCAAGCAAAACCTATGACCCACTGATTAAGTCCACCCGAGATTTTCCAGATGATGTCA TCAGTTTCATAAAGCGGCACTCTGTGATGTATAAGTCCGTATACCCAGTTGCAGGAGGACCAACGTTCAAGAGAATCAATGTGGATTACA GACTGACACAGATAGTGGTGGATCATGTCATTGCAGAAGATGGCCAGTACGATGTAATGTTTCTTGGAACAGACATTGGAACTGTCCTCA AAGTTGTCAGCATTTCAAAGGAAAAGTGGAATATGGAAGAGGTAGTGCTGGAGGAGTTGCAGATATTCAAGCACTCATCAATCATCTTGA ACATGGAATTGTCTCTGAAGCAGCAACAATTGTACATTGGTTCCCGAGATGGATTGGTTCAGCTCTCCTTGCACAGATGCGACACTTATG GGAAAGCTTGCGCAGACTGTTGTCTTGCCAGAGACCCCTACTGTGCCTGGGATGGAAATGCATGCTCTCGATATGCTCCTACTTCTAAAA GGAGAGCTAGACGCCAAGATGTAAAATATGGCGACCCAATCACCCAGTGCTGGGACATCGAAGACAGCATTAGTCATGAAACTGCTGATG AAAAGGTGATTTTTGGCATTGAATTTAACTCAACCTTTCTGGAATGTATACCTAAATCCCAACAAGCAACTATTAAATGGTATATCCAGA GGTCAGGGGATGAGCATCGAGAGGAGTTGAAGCCCGATGAAAGAATCATCAAAACGGAATATGGGCTACTGATTCGAAGTTTGCAGAAGA AGGATTCTGGGATGTATTACTGCAAAGCCCAGGAGCACACTTTCATCCACACCATAGTGAAGCTGACTTTGAATGTCATTGAGAATGAAC AGATGGAAAATACCCAGAGGGCAGAGCATGAGGAGGGGAAGGTCAAGGATCTATTGGCTGAGTCACGGTTGAGATACAAAGACTACATCC AAATCCTTAGCAGCCCAAACTTCAGCCTCGACCAGTACTGCGAACAGATGTGGCACAGGGAGAAGCGGAGACAGAGAAACAAGGGGGGCC CAAAGTGGAAGCACATGCAGGAAATGAAGAAGAAACGAAATCGAAGACATCACAGAGACCTGGATGAGCTCCCTAGAGCTGTAGCCACGT AGTTTTCTACTTAATTTAAAGAAAAGAATTCCTTACCTATAAAAACATTGCCTTCTGTTTTGTATATCCCTTATAGTAATTCATAAATGC TTCCCATGGAGTTTTGCTAAGGCACAAGACAATAATCTGAATAAGACAATATGTGATGAATATAAGAAAGGGCAAAAAATTCATTTGAAC CAGTTTTCCAAGAACAAATCTTGCACAAGCAAAGTATAAGAATTATCCTAAAAATAGGGGGTTTACAGTTGTAAATGTTTTATGTTTTGA GTTTTGGAATTTATTGTCATGTAAATAGTTGAGCTAAGCAAGCCCCGAATTTGATAGTGTATAAGGTGCTTTATTCCCTCGAATGTCCAT TAAGCATGGAATTTACCATGCAGTTGTGCTATGTTCTTATGAACAGATATATCATTCCTATTGAGAACCAGCTACCTTGTGGTAGGGAAT AAGAGGTCAGACACAAATTAAGACAACTCCCATTATCAACAGGAACTTTCTCAGTGAGCCATTCACTCCTGGAGAATGGTATAGGAATTT GGAGAGGTGCATTATTTCTTTCTGGCCACTGGGGTTAAATTTAGTGTACTACAACATTGATTTACTGAAGGGCACTAATGTTTCCCCCAG GATTTCTATTGACTAGTCAGGAGTAACAGGTTCACAGAGAGAAGTTGGTGCTTAGTTATGTGTTTTTTAGAGTATATACTAAGCTCTACA GGGACAGAATGCTTAATAAATACTTTAATAAGATATGGGAAAATATTTTAATAAAACAAGGAAAACATAATGATGTATAATGCATCCTGA TGGGAAGGCATGCAGATGGGATTTGTTAGAAGACAGAAGGAAAGACAGCCATAAATTCTGGCTTTGGGGAAAACTCATATCCCCATGAAA AGGAAGAACAATCACAAATAAAGTGAGAGTAATGTAATGGAGCTCTTTTCACTAGGGTATAAGTAGCTGCCAATTTGTAATTCATCTGTT AAAAAAAATCTAGATTATAACAAACTGCTAGCAAAATCTGAGGAAACATAAATTCTTCTGAAGAATCATAGGAAGAGTAGACATTTTATT TATAACCAATGATATTTCAGTATATATTTTCTCTCTTTTAAAAAATATTTATCATACTCTGTATATTATTTCTTTTTACTGCCTTTATTC TCTCCTGTATATTGGATTTTGTGATTATATTTGAGTGAATAGGAGAAAACAATATATAACACACAGAGAATTAAGAAAATGACATTTCTG GGGAGTGGGGATATATATTTGTTGAATAACAGAACGAGTGTAAAATTTTAACAACGGAAAGGGTTAAATTAACTCTTTGACATCTTCACT CAACCTTTTCTCATTGCTGAGTTAATCTGTTGTAATTGTAGTATTGTTTTTGTAATTTAACAATAAATAAGCCTGCTACATGTAAAAAGA ACCAAACTCACAATATTAACATAAACATCTTTCATATTTTGTTAGTACTTTCAAATGTTTTCAATTTGACTTTCCCTCTGAATATGCATG GTGTGTTTCCTGTCTGTTTAAGCAGAACTCACCTTTCCTTCTTGTAACACAGAACCCTTAGCCTTCTTCTGTTTTGCCTTTTCACGCCCT TTATAGTGTGAAATGAAAAATTAGTCACTTCCTCACATGGAAGGCAGCTTTTCAGAAAATAACAGACATTGCTCGTTTCTCATGCATTCT ACATATCTTGAAAGAAAAGTCTGTGAGAAAACCCTGTGATTAGAGGGCAACTTAATGCAAGATCTGTGGCTCTATGTTGAGAGCATTCTC TCTCTGTTATTTTTATTTTATTTGCATTGCTTACCTATCTCAAAGTAGTCAAACTGATATATGAGATTGAGTACTCCCTTTTGATATTAT ACTGATGAATATTTGTAGGTGTTTCACTATAAGGAACAGCTAAGGAATAATTTTAATAAAAGTGAACCAGAACAAATCACTCATTTAAAA AGTAATTCAGAAGAACAGTGTGGCATGATCAGACTTCTAATTGAATAGCGTAACAACAGTGTTTGTAATTATAGATTTGCTTGGACAAAA TATTCCAGGAACTCATAGCGAGCTCAAAGCAATTAAGTGGGAACATTTTTAATTTAAAAAAAATTTCCAAATATTTGTGGGTCCGACAGT AATGATCAAAATATGAATGACTTTGGAAAATTTACATGAAGCTCAAGTGTTAGGATTGACTTATGAAAATAAATTTTATTTCTATCCAAA TTTGAATGTCCAAACCATTTTTTAGTTACTTCTTTCTAATCCTAGTTATTCAGACAAAATTTGGAAACTTATTTTATGACCACATCTAAT ATTCTGGCTGCTTTGGATACAATACTCTTGATTTATGATAATTAGTTAAAATATATTAAAAATATTATTAGTAAAATAAAATTTCACACA ATAAAAAACAACATAGAGTACACATATTTATATGTATTTTTAAAGATAAAGAATATCTAAAATGTGTTTTTTTCTTAGCTTTTTAGTTGT CTAGAACATTTAGAGAAAGAGTATGAATATATTAAATCCACAAACACACTATATACTTCCTCACCACTGACTATTTTATCAAATTTGCCT TAAAATAATGAAAAAGAAAAGTATAGTTAATGGTTTCAAATATGCTAAGAAATTGACTCTGCGGAGGGGATCTTAAAATGCCTGTTTACT CATGTTTTCGTATTTTTCTTGTCTCTAATACTTTTGTCTTTGTCTGCCTTGTGTGTTCTTTTCTGAATTTCATTTCAGCAATTTATGCTG CTAAATAGAATCCCGCATGTCTGCATTCATTTACATTCAACTTATTGTAAATTTTGAGATTTTATTTAGAAATGAATTGTCTAATTAATT TATGTAGAGTCCTTTTTTCCAAAGAGCTCAAAACACTACATCCACATTATTGACTTTTGGAAACCAACCAAATTACTTAAGAAATGGAAA AGTAGTCACAGAGAAATTTAGTAATTTGCAAAAGCCACAACAGTAGTGGAAGAATTAAAATTCATAAAGTCTCATCATTCTGTTGGCTAA AATAATGCTCTTTACAATATGCTGGCTACAAAATGGTCTTACTCTTGAATTTTGCTTTTGGTTCATATTTTGGTTCTTCATATTCTAGTA TGTTTTGTTCCTGCTGAATTTTACAGACTCAGCTAAACAATAAGTTATTAGTAGTCACTTGTTTTCATTATCATAATTGAATTTCCAAGA ACAACTTGATATCATTCAGCTGTCCAAAAAATAATAAGAGCATTCATTAAATACTGATTTTCTTAAACTTAAATGTTGTATTTCATATTT ATTTATATAATACAAATGGAAATCAAAACTGAAATAGCCTCCCTTTAGAATGTCACATTTTTCTTAGAAAACATTTTGGAATTGGTTAAC CTTATTGGGAATGGATAATTTAGAAACAAACCAAAAAAAAAAAAAGATATTTGAAGTGTTTTTATAGGAGATGTATTTTTATCATAGTAA ATGATCACAATTTTAAATAATTCATCTTACAAGTCAGGTAAAATAAAATCGATTCCCAGATTCCATACATTAGGAGTGCAAAGACAGGAT CATACACATGACTTATACCTCTCATTTAAATATTTTATAGTATAAAGTATTTATGGAAAGGGTTTGAGATAGATGATTTTTGGGAAAGGG CAAAATGTGTCAGATGCCCTAGTTAATCATGTAATTTAATTCTGGTATTGTGAGTGGTTAGCAATCAATTTTGAATTTATAATTCTGCTA TTTTAAAAGAAATGTAGTCTTGTAGTATGAAATAATTAAAAATTGTTAAATGTATATTTTGGTTGTATTATAATAAAATGCAAACATGAC >In-frame_ENST00000394702_ENST00000284136_TCGA-FG-5963-01A_DMTF1_chr7_86800405_+_SEMA3D_chr7_84702397_length(amino acids)=763AA_start in transcript=320_stop in transcript=2611 MSMSTVEEDSDTVTVETVNSVTLTQDTEGNLILHCPQNEADEIDSEDSIEPPHKRLCLSSEDDQSIDDSTPCISVVALPLSENDQSFEVT MTATTEVADDEVTEGTVTQIQTECANFIRVLQPYNKTHIYVCGTGAFHPICGYIDLGVYKEDIIFKLDTHNLESGRLKCPFDPQQPFASV MTDEYLYSGTASDFLGKDTAFTRSLGPTHDHHYIRTDISEHYWLNGAKFIGTFFIPDTYNPDDDKIYFFFRESSQEGSTSDKTILSRVGR VCKNDVGGQRSLINKWTTFLKARLICSIPGSDGADTYFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSMADIRAVFNGPYA HKESADHRWVQYDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFIKRHSVMYKSVYPVAGGPTFKRINVDYRLTQIVVDHVIAEDGQY DVMFLGTDIGTVLKVVSISKEKWNMEEVVLEELQIFKHSSIILNMELSLKQQQLYIGSRDGLVQLSLHRCDTYGKACADCCLARDPYCAW DGNACSRYAPTSKRRARRQDVKYGDPITQCWDIEDSISHETADEKVIFGIEFNSTFLECIPKSQQATIKWYIQRSGDEHREELKPDERII KTEYGLLIRSLQKKDSGMYYCKAQEHTFIHTIVKLTLNVIENEQMENTQRAEHEEGKVKDLLAESRLRYKDYIQILSSPNFSLDQYCEQM -------------------------------------------------------------- >In-frame_ENST00000394702_ENST00000444867_TCGA-FG-5963-01A_DMTF1_chr7_86800405_+_SEMA3D_chr7_84702397_length(transcript)=1533nt_BP=653nt AGCGGGACAGACGAGCGGGAGGGGCAGCGTGCGGGGAGCTGGGGGCGGGGCGCGGCCGCAGCTCCGTTTCCGGTGGCTCGTCGCGCTCGC TCACTCCAGCTGCAGCCACTCTCGCCCGTGGCTGCTTCCTCCATCCTGGTATTTTTTGGAGCTTCCATCCTGGTTCTTCCAAAGTGCCCG GACCCAAAACAGGAAAGTGTTGCGGAGATAGGAACATGGGAGAGAAACAATCTGGGTAACATGAAAGTGATGCTGGTTGCTAAGGGAAGG CAACTTGATTCTGTGGGAAGGGCTGTAGCTGATCCATCCGTTGTCTAGATTTGAGTATGAGCACAGTGGAAGAGGATTCTGACACAGTAA CAGTAGAAACTGTGAACTCTGTGACTTTGACTCAGGACACAGAAGGGAATCTCATTCTTCACTGCCCTCAGAATGAAGCGGATGAAATAG ACTCAGAAGATAGTATTGAACCTCCACATAAAAGGCTTTGTTTGTCCTCTGAGGATGATCAGAGTATTGATGATTCTACTCCTTGCATAT CAGTTGTTGCACTTCCACTTTCAGAAAATGATCAGAGCTTTGAAGTGACCATGACTGCAACCACAGAAGTAGCAGATGATGAGGTTACTG AGGGGACTGTGACACAGATACAGACAGAATGTGCAAATTTCATCAGAGTACTTCAGCCCTATAACAAAACTCACATATATGTGTGTGGAA CTGGAGCATTTCATCCAATATGTGGGTATATTGATCTTGGAGTCTACAAGGAGGATATTATATTCAAACTAGACACACATAATTTGGAGT CTGGCAGACTGAAATGTCCTTTCGATCCTCAGCAGCCTTTTGCTTCAGTAATGACAGATGAGTACCTCTACTCTGGAACAGCTTCTGATT TCCTTGGCAAAGATACTGCATTCACTCGATCCCTTGGGCCTACTCATGACCACCACTACATCAGAACTGACATTTCAGAGCACTACTGGC TCAATGGAGCAAAATTTATTGGAACTTTCTTCATACCAGACACCTACAATCCAGATGATGATAAAATATATTTCTTCTTTCGTGAATCAT CTCAAGAAGGCAGTACCTCCGATAAAACCATCCTTTCTCGAGTTGGAAGAGTTTGTAAGGAGAATTTGTGCTTTGAAGATTGATCTTATT TCTGAACATAGTCAAAGTAATTTGGAGCTGTATTTGGAGAAAGTTGCATAAATGATTTGAACAATGCAAATTTTGGTCAAGAGATATCAA TGAAGAGAGACACAATAAATAAACTGACTTAAAAGATAATTTTACTGGGCAATATTGATCAATGAGAGCCTGAGGCGAATAAGTGCCTTC ATCCACAGAATATCTTTTAAACTTAATATGTTTATAATTATACATGGTAGAGCACATTTCCTAATGAATTATTTTTAGTAGTGTTCCTAC TTTCCAGTCAAACTACTTACTCTATTTTTCCAATAAATTGTTTAACCTTGAAGGATTTCTAAAGTCCTTGTCAAGCTCTACAGTTCTTTC >In-frame_ENST00000394702_ENST00000444867_TCGA-FG-5963-01A_DMTF1_chr7_86800405_+_SEMA3D_chr7_84702397_length(amino acids)=280AA_start in transcript=320_stop in transcript=1162 MSMSTVEEDSDTVTVETVNSVTLTQDTEGNLILHCPQNEADEIDSEDSIEPPHKRLCLSSEDDQSIDDSTPCISVVALPLSENDQSFEVT MTATTEVADDEVTEGTVTQIQTECANFIRVLQPYNKTHIYVCGTGAFHPICGYIDLGVYKEDIIFKLDTHNLESGRLKCPFDPQQPFASV MTDEYLYSGTASDFLGKDTAFTRSLGPTHDHHYIRTDISEHYWLNGAKFIGTFFIPDTYNPDDDKIYFFFRESSQEGSTSDKTILSRVGR -------------------------------------------------------------- >In-frame_ENST00000331242_ENST00000284136_TCGA-FG-5963-01A_DMTF1_chr7_86800405_+_SEMA3D_chr7_84702397_length(transcript)=6499nt_BP=653nt AGCGGGACAGACGAGCGGGAGGGGCAGCGTGCGGGGAGCTGGGGGCGGGGCGCGGCCGCAGCTCCGTTTCCGGTGGCTCGTCGCGCTCGC TCACTCCAGCTGCAGCCACTCTCGCCCGTGGCTGCTTCCTCCATCCTGGTATTTTTTGGAGCTTCCATCCTGGTTCTTCCAAAGTGCCCG GACCCAAAACAGGAAAGTGTTGCGGAGATAGGAACATGGGAGAGAAACAATCTGGGTAACATGAAAGTGATGCTGGTTGCTAAGGGAAGG CAACTTGATTCTGTGGGAAGGGCTGTAGCTGATCCATCCGTTGTCTAGATTTGAGTATGAGCACAGTGGAAGAGGATTCTGACACAGTAA CAGTAGAAACTGTGAACTCTGTGACTTTGACTCAGGACACAGAAGGGAATCTCATTCTTCACTGCCCTCAGAATGAAGCGGATGAAATAG ACTCAGAAGATAGTATTGAACCTCCACATAAAAGGCTTTGTTTGTCCTCTGAGGATGATCAGAGTATTGATGATTCTACTCCTTGCATAT CAGTTGTTGCACTTCCACTTTCAGAAAATGATCAGAGCTTTGAAGTGACCATGACTGCAACCACAGAAGTAGCAGATGATGAGGTTACTG AGGGGACTGTGACACAGATACAGACAGAATGTGCAAATTTCATCAGAGTACTTCAGCCCTATAACAAAACTCACATATATGTGTGTGGAA CTGGAGCATTTCATCCAATATGTGGGTATATTGATCTTGGAGTCTACAAGGAGGATATTATATTCAAACTAGACACACATAATTTGGAGT CTGGCAGACTGAAATGTCCTTTCGATCCTCAGCAGCCTTTTGCTTCAGTAATGACAGATGAGTACCTCTACTCTGGAACAGCTTCTGATT TCCTTGGCAAAGATACTGCATTCACTCGATCCCTTGGGCCTACTCATGACCACCACTACATCAGAACTGACATTTCAGAGCACTACTGGC TCAATGGAGCAAAATTTATTGGAACTTTCTTCATACCAGACACCTACAATCCAGATGATGATAAAATATATTTCTTCTTTCGTGAATCAT CTCAAGAAGGCAGTACCTCCGATAAAACCATCCTTTCTCGAGTTGGAAGAGTTTGTAAGAATGATGTAGGAGGACAACGCAGCCTGATAA ACAAGTGGACGACTTTTCTTAAGGCCAGACTGATTTGCTCAATTCCTGGAAGTGATGGGGCAGATACTTACTTTGATGAGCTTCAAGATA TTTATTTACTCCCCACAAGAGATGAAAGAAATCCTGTAGTATATGGAGTCTTTACTACAACCAGCTCCATCTTCAAAGGCTCTGCTGTTT GTGTGTATAGCATGGCTGACATCAGAGCAGTTTTTAATGGTCCATATGCTCATAAGGAAAGTGCAGACCATCGTTGGGTGCAGTATGATG GGAGAATTCCTTATCCACGGCCTGGTACATGTCCAAGCAAAACCTATGACCCACTGATTAAGTCCACCCGAGATTTTCCAGATGATGTCA TCAGTTTCATAAAGCGGCACTCTGTGATGTATAAGTCCGTATACCCAGTTGCAGGAGGACCAACGTTCAAGAGAATCAATGTGGATTACA GACTGACACAGATAGTGGTGGATCATGTCATTGCAGAAGATGGCCAGTACGATGTAATGTTTCTTGGAACAGACATTGGAACTGTCCTCA AAGTTGTCAGCATTTCAAAGGAAAAGTGGAATATGGAAGAGGTAGTGCTGGAGGAGTTGCAGATATTCAAGCACTCATCAATCATCTTGA ACATGGAATTGTCTCTGAAGCAGCAACAATTGTACATTGGTTCCCGAGATGGATTGGTTCAGCTCTCCTTGCACAGATGCGACACTTATG GGAAAGCTTGCGCAGACTGTTGTCTTGCCAGAGACCCCTACTGTGCCTGGGATGGAAATGCATGCTCTCGATATGCTCCTACTTCTAAAA GGAGAGCTAGACGCCAAGATGTAAAATATGGCGACCCAATCACCCAGTGCTGGGACATCGAAGACAGCATTAGTCATGAAACTGCTGATG AAAAGGTGATTTTTGGCATTGAATTTAACTCAACCTTTCTGGAATGTATACCTAAATCCCAACAAGCAACTATTAAATGGTATATCCAGA GGTCAGGGGATGAGCATCGAGAGGAGTTGAAGCCCGATGAAAGAATCATCAAAACGGAATATGGGCTACTGATTCGAAGTTTGCAGAAGA AGGATTCTGGGATGTATTACTGCAAAGCCCAGGAGCACACTTTCATCCACACCATAGTGAAGCTGACTTTGAATGTCATTGAGAATGAAC AGATGGAAAATACCCAGAGGGCAGAGCATGAGGAGGGGAAGGTCAAGGATCTATTGGCTGAGTCACGGTTGAGATACAAAGACTACATCC AAATCCTTAGCAGCCCAAACTTCAGCCTCGACCAGTACTGCGAACAGATGTGGCACAGGGAGAAGCGGAGACAGAGAAACAAGGGGGGCC CAAAGTGGAAGCACATGCAGGAAATGAAGAAGAAACGAAATCGAAGACATCACAGAGACCTGGATGAGCTCCCTAGAGCTGTAGCCACGT AGTTTTCTACTTAATTTAAAGAAAAGAATTCCTTACCTATAAAAACATTGCCTTCTGTTTTGTATATCCCTTATAGTAATTCATAAATGC TTCCCATGGAGTTTTGCTAAGGCACAAGACAATAATCTGAATAAGACAATATGTGATGAATATAAGAAAGGGCAAAAAATTCATTTGAAC CAGTTTTCCAAGAACAAATCTTGCACAAGCAAAGTATAAGAATTATCCTAAAAATAGGGGGTTTACAGTTGTAAATGTTTTATGTTTTGA GTTTTGGAATTTATTGTCATGTAAATAGTTGAGCTAAGCAAGCCCCGAATTTGATAGTGTATAAGGTGCTTTATTCCCTCGAATGTCCAT TAAGCATGGAATTTACCATGCAGTTGTGCTATGTTCTTATGAACAGATATATCATTCCTATTGAGAACCAGCTACCTTGTGGTAGGGAAT AAGAGGTCAGACACAAATTAAGACAACTCCCATTATCAACAGGAACTTTCTCAGTGAGCCATTCACTCCTGGAGAATGGTATAGGAATTT GGAGAGGTGCATTATTTCTTTCTGGCCACTGGGGTTAAATTTAGTGTACTACAACATTGATTTACTGAAGGGCACTAATGTTTCCCCCAG GATTTCTATTGACTAGTCAGGAGTAACAGGTTCACAGAGAGAAGTTGGTGCTTAGTTATGTGTTTTTTAGAGTATATACTAAGCTCTACA GGGACAGAATGCTTAATAAATACTTTAATAAGATATGGGAAAATATTTTAATAAAACAAGGAAAACATAATGATGTATAATGCATCCTGA TGGGAAGGCATGCAGATGGGATTTGTTAGAAGACAGAAGGAAAGACAGCCATAAATTCTGGCTTTGGGGAAAACTCATATCCCCATGAAA AGGAAGAACAATCACAAATAAAGTGAGAGTAATGTAATGGAGCTCTTTTCACTAGGGTATAAGTAGCTGCCAATTTGTAATTCATCTGTT AAAAAAAATCTAGATTATAACAAACTGCTAGCAAAATCTGAGGAAACATAAATTCTTCTGAAGAATCATAGGAAGAGTAGACATTTTATT TATAACCAATGATATTTCAGTATATATTTTCTCTCTTTTAAAAAATATTTATCATACTCTGTATATTATTTCTTTTTACTGCCTTTATTC TCTCCTGTATATTGGATTTTGTGATTATATTTGAGTGAATAGGAGAAAACAATATATAACACACAGAGAATTAAGAAAATGACATTTCTG GGGAGTGGGGATATATATTTGTTGAATAACAGAACGAGTGTAAAATTTTAACAACGGAAAGGGTTAAATTAACTCTTTGACATCTTCACT CAACCTTTTCTCATTGCTGAGTTAATCTGTTGTAATTGTAGTATTGTTTTTGTAATTTAACAATAAATAAGCCTGCTACATGTAAAAAGA ACCAAACTCACAATATTAACATAAACATCTTTCATATTTTGTTAGTACTTTCAAATGTTTTCAATTTGACTTTCCCTCTGAATATGCATG GTGTGTTTCCTGTCTGTTTAAGCAGAACTCACCTTTCCTTCTTGTAACACAGAACCCTTAGCCTTCTTCTGTTTTGCCTTTTCACGCCCT TTATAGTGTGAAATGAAAAATTAGTCACTTCCTCACATGGAAGGCAGCTTTTCAGAAAATAACAGACATTGCTCGTTTCTCATGCATTCT ACATATCTTGAAAGAAAAGTCTGTGAGAAAACCCTGTGATTAGAGGGCAACTTAATGCAAGATCTGTGGCTCTATGTTGAGAGCATTCTC TCTCTGTTATTTTTATTTTATTTGCATTGCTTACCTATCTCAAAGTAGTCAAACTGATATATGAGATTGAGTACTCCCTTTTGATATTAT ACTGATGAATATTTGTAGGTGTTTCACTATAAGGAACAGCTAAGGAATAATTTTAATAAAAGTGAACCAGAACAAATCACTCATTTAAAA AGTAATTCAGAAGAACAGTGTGGCATGATCAGACTTCTAATTGAATAGCGTAACAACAGTGTTTGTAATTATAGATTTGCTTGGACAAAA TATTCCAGGAACTCATAGCGAGCTCAAAGCAATTAAGTGGGAACATTTTTAATTTAAAAAAAATTTCCAAATATTTGTGGGTCCGACAGT AATGATCAAAATATGAATGACTTTGGAAAATTTACATGAAGCTCAAGTGTTAGGATTGACTTATGAAAATAAATTTTATTTCTATCCAAA TTTGAATGTCCAAACCATTTTTTAGTTACTTCTTTCTAATCCTAGTTATTCAGACAAAATTTGGAAACTTATTTTATGACCACATCTAAT ATTCTGGCTGCTTTGGATACAATACTCTTGATTTATGATAATTAGTTAAAATATATTAAAAATATTATTAGTAAAATAAAATTTCACACA ATAAAAAACAACATAGAGTACACATATTTATATGTATTTTTAAAGATAAAGAATATCTAAAATGTGTTTTTTTCTTAGCTTTTTAGTTGT CTAGAACATTTAGAGAAAGAGTATGAATATATTAAATCCACAAACACACTATATACTTCCTCACCACTGACTATTTTATCAAATTTGCCT TAAAATAATGAAAAAGAAAAGTATAGTTAATGGTTTCAAATATGCTAAGAAATTGACTCTGCGGAGGGGATCTTAAAATGCCTGTTTACT CATGTTTTCGTATTTTTCTTGTCTCTAATACTTTTGTCTTTGTCTGCCTTGTGTGTTCTTTTCTGAATTTCATTTCAGCAATTTATGCTG CTAAATAGAATCCCGCATGTCTGCATTCATTTACATTCAACTTATTGTAAATTTTGAGATTTTATTTAGAAATGAATTGTCTAATTAATT TATGTAGAGTCCTTTTTTCCAAAGAGCTCAAAACACTACATCCACATTATTGACTTTTGGAAACCAACCAAATTACTTAAGAAATGGAAA AGTAGTCACAGAGAAATTTAGTAATTTGCAAAAGCCACAACAGTAGTGGAAGAATTAAAATTCATAAAGTCTCATCATTCTGTTGGCTAA AATAATGCTCTTTACAATATGCTGGCTACAAAATGGTCTTACTCTTGAATTTTGCTTTTGGTTCATATTTTGGTTCTTCATATTCTAGTA TGTTTTGTTCCTGCTGAATTTTACAGACTCAGCTAAACAATAAGTTATTAGTAGTCACTTGTTTTCATTATCATAATTGAATTTCCAAGA ACAACTTGATATCATTCAGCTGTCCAAAAAATAATAAGAGCATTCATTAAATACTGATTTTCTTAAACTTAAATGTTGTATTTCATATTT ATTTATATAATACAAATGGAAATCAAAACTGAAATAGCCTCCCTTTAGAATGTCACATTTTTCTTAGAAAACATTTTGGAATTGGTTAAC CTTATTGGGAATGGATAATTTAGAAACAAACCAAAAAAAAAAAAAGATATTTGAAGTGTTTTTATAGGAGATGTATTTTTATCATAGTAA ATGATCACAATTTTAAATAATTCATCTTACAAGTCAGGTAAAATAAAATCGATTCCCAGATTCCATACATTAGGAGTGCAAAGACAGGAT CATACACATGACTTATACCTCTCATTTAAATATTTTATAGTATAAAGTATTTATGGAAAGGGTTTGAGATAGATGATTTTTGGGAAAGGG CAAAATGTGTCAGATGCCCTAGTTAATCATGTAATTTAATTCTGGTATTGTGAGTGGTTAGCAATCAATTTTGAATTTATAATTCTGCTA TTTTAAAAGAAATGTAGTCTTGTAGTATGAAATAATTAAAAATTGTTAAATGTATATTTTGGTTGTATTATAATAAAATGCAAACATGAC >In-frame_ENST00000331242_ENST00000284136_TCGA-FG-5963-01A_DMTF1_chr7_86800405_+_SEMA3D_chr7_84702397_length(amino acids)=763AA_start in transcript=320_stop in transcript=2611 MSMSTVEEDSDTVTVETVNSVTLTQDTEGNLILHCPQNEADEIDSEDSIEPPHKRLCLSSEDDQSIDDSTPCISVVALPLSENDQSFEVT MTATTEVADDEVTEGTVTQIQTECANFIRVLQPYNKTHIYVCGTGAFHPICGYIDLGVYKEDIIFKLDTHNLESGRLKCPFDPQQPFASV MTDEYLYSGTASDFLGKDTAFTRSLGPTHDHHYIRTDISEHYWLNGAKFIGTFFIPDTYNPDDDKIYFFFRESSQEGSTSDKTILSRVGR VCKNDVGGQRSLINKWTTFLKARLICSIPGSDGADTYFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSMADIRAVFNGPYA HKESADHRWVQYDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFIKRHSVMYKSVYPVAGGPTFKRINVDYRLTQIVVDHVIAEDGQY DVMFLGTDIGTVLKVVSISKEKWNMEEVVLEELQIFKHSSIILNMELSLKQQQLYIGSRDGLVQLSLHRCDTYGKACADCCLARDPYCAW DGNACSRYAPTSKRRARRQDVKYGDPITQCWDIEDSISHETADEKVIFGIEFNSTFLECIPKSQQATIKWYIQRSGDEHREELKPDERII KTEYGLLIRSLQKKDSGMYYCKAQEHTFIHTIVKLTLNVIENEQMENTQRAEHEEGKVKDLLAESRLRYKDYIQILSSPNFSLDQYCEQM -------------------------------------------------------------- >In-frame_ENST00000331242_ENST00000444867_TCGA-FG-5963-01A_DMTF1_chr7_86800405_+_SEMA3D_chr7_84702397_length(transcript)=1533nt_BP=653nt AGCGGGACAGACGAGCGGGAGGGGCAGCGTGCGGGGAGCTGGGGGCGGGGCGCGGCCGCAGCTCCGTTTCCGGTGGCTCGTCGCGCTCGC TCACTCCAGCTGCAGCCACTCTCGCCCGTGGCTGCTTCCTCCATCCTGGTATTTTTTGGAGCTTCCATCCTGGTTCTTCCAAAGTGCCCG GACCCAAAACAGGAAAGTGTTGCGGAGATAGGAACATGGGAGAGAAACAATCTGGGTAACATGAAAGTGATGCTGGTTGCTAAGGGAAGG CAACTTGATTCTGTGGGAAGGGCTGTAGCTGATCCATCCGTTGTCTAGATTTGAGTATGAGCACAGTGGAAGAGGATTCTGACACAGTAA CAGTAGAAACTGTGAACTCTGTGACTTTGACTCAGGACACAGAAGGGAATCTCATTCTTCACTGCCCTCAGAATGAAGCGGATGAAATAG ACTCAGAAGATAGTATTGAACCTCCACATAAAAGGCTTTGTTTGTCCTCTGAGGATGATCAGAGTATTGATGATTCTACTCCTTGCATAT CAGTTGTTGCACTTCCACTTTCAGAAAATGATCAGAGCTTTGAAGTGACCATGACTGCAACCACAGAAGTAGCAGATGATGAGGTTACTG AGGGGACTGTGACACAGATACAGACAGAATGTGCAAATTTCATCAGAGTACTTCAGCCCTATAACAAAACTCACATATATGTGTGTGGAA CTGGAGCATTTCATCCAATATGTGGGTATATTGATCTTGGAGTCTACAAGGAGGATATTATATTCAAACTAGACACACATAATTTGGAGT CTGGCAGACTGAAATGTCCTTTCGATCCTCAGCAGCCTTTTGCTTCAGTAATGACAGATGAGTACCTCTACTCTGGAACAGCTTCTGATT TCCTTGGCAAAGATACTGCATTCACTCGATCCCTTGGGCCTACTCATGACCACCACTACATCAGAACTGACATTTCAGAGCACTACTGGC TCAATGGAGCAAAATTTATTGGAACTTTCTTCATACCAGACACCTACAATCCAGATGATGATAAAATATATTTCTTCTTTCGTGAATCAT CTCAAGAAGGCAGTACCTCCGATAAAACCATCCTTTCTCGAGTTGGAAGAGTTTGTAAGGAGAATTTGTGCTTTGAAGATTGATCTTATT TCTGAACATAGTCAAAGTAATTTGGAGCTGTATTTGGAGAAAGTTGCATAAATGATTTGAACAATGCAAATTTTGGTCAAGAGATATCAA TGAAGAGAGACACAATAAATAAACTGACTTAAAAGATAATTTTACTGGGCAATATTGATCAATGAGAGCCTGAGGCGAATAAGTGCCTTC ATCCACAGAATATCTTTTAAACTTAATATGTTTATAATTATACATGGTAGAGCACATTTCCTAATGAATTATTTTTAGTAGTGTTCCTAC TTTCCAGTCAAACTACTTACTCTATTTTTCCAATAAATTGTTTAACCTTGAAGGATTTCTAAAGTCCTTGTCAAGCTCTACAGTTCTTTC >In-frame_ENST00000331242_ENST00000444867_TCGA-FG-5963-01A_DMTF1_chr7_86800405_+_SEMA3D_chr7_84702397_length(amino acids)=280AA_start in transcript=320_stop in transcript=1162 MSMSTVEEDSDTVTVETVNSVTLTQDTEGNLILHCPQNEADEIDSEDSIEPPHKRLCLSSEDDQSIDDSTPCISVVALPLSENDQSFEVT MTATTEVADDEVTEGTVTQIQTECANFIRVLQPYNKTHIYVCGTGAFHPICGYIDLGVYKEDIIFKLDTHNLESGRLKCPFDPQQPFASV MTDEYLYSGTASDFLGKDTAFTRSLGPTHDHHYIRTDISEHYWLNGAKFIGTFFIPDTYNPDDDKIYFFFRESSQEGSTSDKTILSRVGR -------------------------------------------------------------- >In-frame_ENST00000413276_ENST00000284136_TCGA-FG-5963-01A_DMTF1_chr7_86800405_+_SEMA3D_chr7_84702397_length(transcript)=6451nt_BP=605nt GGCGCGGCCGCAGCTCCGTTTCCGGTGGCTCGTCGCGCTCGCTCACTCCAGCTGCAGCCACTCTCGCCCGTGGCTGCTTCCTCCATCCTG GTATTTTTTGGAGCTTCCATCCTGGTTCTTCCAAAGTGCCCGGACCCAAAACAGGAAAGTGTTGCGGAGATAGGAACATGGGAGAGAAAC AATCTGGGTAACATGAAAGTGATGCTGGTTGCTAAGGGAAGGCAACTTGATTCTGTGGGAAGGGCTGTAGCTGATCCATCCGTTGTCTAG ATTTGAGTATGAGCACAGTGGAAGAGGATTCTGACACAGTAACAGTAGAAACTGTGAACTCTGTGACTTTGACTCAGGACACAGAAGGGA ATCTCATTCTTCACTGCCCTCAGAATGAAGCGGATGAAATAGACTCAGAAGATAGTATTGAACCTCCACATAAAAGGCTTTGTTTGTCCT CTGAGGATGATCAGAGTATTGATGATTCTACTCCTTGCATATCAGTTGTTGCACTTCCACTTTCAGAAAATGATCAGAGCTTTGAAGTGA CCATGACTGCAACCACAGAAGTAGCAGATGATGAGGTTACTGAGGGGACTGTGACACAGATACAGACAGAATGTGCAAATTTCATCAGAG TACTTCAGCCCTATAACAAAACTCACATATATGTGTGTGGAACTGGAGCATTTCATCCAATATGTGGGTATATTGATCTTGGAGTCTACA AGGAGGATATTATATTCAAACTAGACACACATAATTTGGAGTCTGGCAGACTGAAATGTCCTTTCGATCCTCAGCAGCCTTTTGCTTCAG TAATGACAGATGAGTACCTCTACTCTGGAACAGCTTCTGATTTCCTTGGCAAAGATACTGCATTCACTCGATCCCTTGGGCCTACTCATG ACCACCACTACATCAGAACTGACATTTCAGAGCACTACTGGCTCAATGGAGCAAAATTTATTGGAACTTTCTTCATACCAGACACCTACA ATCCAGATGATGATAAAATATATTTCTTCTTTCGTGAATCATCTCAAGAAGGCAGTACCTCCGATAAAACCATCCTTTCTCGAGTTGGAA GAGTTTGTAAGAATGATGTAGGAGGACAACGCAGCCTGATAAACAAGTGGACGACTTTTCTTAAGGCCAGACTGATTTGCTCAATTCCTG GAAGTGATGGGGCAGATACTTACTTTGATGAGCTTCAAGATATTTATTTACTCCCCACAAGAGATGAAAGAAATCCTGTAGTATATGGAG TCTTTACTACAACCAGCTCCATCTTCAAAGGCTCTGCTGTTTGTGTGTATAGCATGGCTGACATCAGAGCAGTTTTTAATGGTCCATATG CTCATAAGGAAAGTGCAGACCATCGTTGGGTGCAGTATGATGGGAGAATTCCTTATCCACGGCCTGGTACATGTCCAAGCAAAACCTATG ACCCACTGATTAAGTCCACCCGAGATTTTCCAGATGATGTCATCAGTTTCATAAAGCGGCACTCTGTGATGTATAAGTCCGTATACCCAG TTGCAGGAGGACCAACGTTCAAGAGAATCAATGTGGATTACAGACTGACACAGATAGTGGTGGATCATGTCATTGCAGAAGATGGCCAGT ACGATGTAATGTTTCTTGGAACAGACATTGGAACTGTCCTCAAAGTTGTCAGCATTTCAAAGGAAAAGTGGAATATGGAAGAGGTAGTGC TGGAGGAGTTGCAGATATTCAAGCACTCATCAATCATCTTGAACATGGAATTGTCTCTGAAGCAGCAACAATTGTACATTGGTTCCCGAG ATGGATTGGTTCAGCTCTCCTTGCACAGATGCGACACTTATGGGAAAGCTTGCGCAGACTGTTGTCTTGCCAGAGACCCCTACTGTGCCT GGGATGGAAATGCATGCTCTCGATATGCTCCTACTTCTAAAAGGAGAGCTAGACGCCAAGATGTAAAATATGGCGACCCAATCACCCAGT GCTGGGACATCGAAGACAGCATTAGTCATGAAACTGCTGATGAAAAGGTGATTTTTGGCATTGAATTTAACTCAACCTTTCTGGAATGTA TACCTAAATCCCAACAAGCAACTATTAAATGGTATATCCAGAGGTCAGGGGATGAGCATCGAGAGGAGTTGAAGCCCGATGAAAGAATCA TCAAAACGGAATATGGGCTACTGATTCGAAGTTTGCAGAAGAAGGATTCTGGGATGTATTACTGCAAAGCCCAGGAGCACACTTTCATCC ACACCATAGTGAAGCTGACTTTGAATGTCATTGAGAATGAACAGATGGAAAATACCCAGAGGGCAGAGCATGAGGAGGGGAAGGTCAAGG ATCTATTGGCTGAGTCACGGTTGAGATACAAAGACTACATCCAAATCCTTAGCAGCCCAAACTTCAGCCTCGACCAGTACTGCGAACAGA TGTGGCACAGGGAGAAGCGGAGACAGAGAAACAAGGGGGGCCCAAAGTGGAAGCACATGCAGGAAATGAAGAAGAAACGAAATCGAAGAC ATCACAGAGACCTGGATGAGCTCCCTAGAGCTGTAGCCACGTAGTTTTCTACTTAATTTAAAGAAAAGAATTCCTTACCTATAAAAACAT TGCCTTCTGTTTTGTATATCCCTTATAGTAATTCATAAATGCTTCCCATGGAGTTTTGCTAAGGCACAAGACAATAATCTGAATAAGACA ATATGTGATGAATATAAGAAAGGGCAAAAAATTCATTTGAACCAGTTTTCCAAGAACAAATCTTGCACAAGCAAAGTATAAGAATTATCC TAAAAATAGGGGGTTTACAGTTGTAAATGTTTTATGTTTTGAGTTTTGGAATTTATTGTCATGTAAATAGTTGAGCTAAGCAAGCCCCGA ATTTGATAGTGTATAAGGTGCTTTATTCCCTCGAATGTCCATTAAGCATGGAATTTACCATGCAGTTGTGCTATGTTCTTATGAACAGAT ATATCATTCCTATTGAGAACCAGCTACCTTGTGGTAGGGAATAAGAGGTCAGACACAAATTAAGACAACTCCCATTATCAACAGGAACTT TCTCAGTGAGCCATTCACTCCTGGAGAATGGTATAGGAATTTGGAGAGGTGCATTATTTCTTTCTGGCCACTGGGGTTAAATTTAGTGTA CTACAACATTGATTTACTGAAGGGCACTAATGTTTCCCCCAGGATTTCTATTGACTAGTCAGGAGTAACAGGTTCACAGAGAGAAGTTGG TGCTTAGTTATGTGTTTTTTAGAGTATATACTAAGCTCTACAGGGACAGAATGCTTAATAAATACTTTAATAAGATATGGGAAAATATTT TAATAAAACAAGGAAAACATAATGATGTATAATGCATCCTGATGGGAAGGCATGCAGATGGGATTTGTTAGAAGACAGAAGGAAAGACAG CCATAAATTCTGGCTTTGGGGAAAACTCATATCCCCATGAAAAGGAAGAACAATCACAAATAAAGTGAGAGTAATGTAATGGAGCTCTTT TCACTAGGGTATAAGTAGCTGCCAATTTGTAATTCATCTGTTAAAAAAAATCTAGATTATAACAAACTGCTAGCAAAATCTGAGGAAACA TAAATTCTTCTGAAGAATCATAGGAAGAGTAGACATTTTATTTATAACCAATGATATTTCAGTATATATTTTCTCTCTTTTAAAAAATAT TTATCATACTCTGTATATTATTTCTTTTTACTGCCTTTATTCTCTCCTGTATATTGGATTTTGTGATTATATTTGAGTGAATAGGAGAAA ACAATATATAACACACAGAGAATTAAGAAAATGACATTTCTGGGGAGTGGGGATATATATTTGTTGAATAACAGAACGAGTGTAAAATTT TAACAACGGAAAGGGTTAAATTAACTCTTTGACATCTTCACTCAACCTTTTCTCATTGCTGAGTTAATCTGTTGTAATTGTAGTATTGTT TTTGTAATTTAACAATAAATAAGCCTGCTACATGTAAAAAGAACCAAACTCACAATATTAACATAAACATCTTTCATATTTTGTTAGTAC TTTCAAATGTTTTCAATTTGACTTTCCCTCTGAATATGCATGGTGTGTTTCCTGTCTGTTTAAGCAGAACTCACCTTTCCTTCTTGTAAC ACAGAACCCTTAGCCTTCTTCTGTTTTGCCTTTTCACGCCCTTTATAGTGTGAAATGAAAAATTAGTCACTTCCTCACATGGAAGGCAGC TTTTCAGAAAATAACAGACATTGCTCGTTTCTCATGCATTCTACATATCTTGAAAGAAAAGTCTGTGAGAAAACCCTGTGATTAGAGGGC AACTTAATGCAAGATCTGTGGCTCTATGTTGAGAGCATTCTCTCTCTGTTATTTTTATTTTATTTGCATTGCTTACCTATCTCAAAGTAG TCAAACTGATATATGAGATTGAGTACTCCCTTTTGATATTATACTGATGAATATTTGTAGGTGTTTCACTATAAGGAACAGCTAAGGAAT AATTTTAATAAAAGTGAACCAGAACAAATCACTCATTTAAAAAGTAATTCAGAAGAACAGTGTGGCATGATCAGACTTCTAATTGAATAG CGTAACAACAGTGTTTGTAATTATAGATTTGCTTGGACAAAATATTCCAGGAACTCATAGCGAGCTCAAAGCAATTAAGTGGGAACATTT TTAATTTAAAAAAAATTTCCAAATATTTGTGGGTCCGACAGTAATGATCAAAATATGAATGACTTTGGAAAATTTACATGAAGCTCAAGT GTTAGGATTGACTTATGAAAATAAATTTTATTTCTATCCAAATTTGAATGTCCAAACCATTTTTTAGTTACTTCTTTCTAATCCTAGTTA TTCAGACAAAATTTGGAAACTTATTTTATGACCACATCTAATATTCTGGCTGCTTTGGATACAATACTCTTGATTTATGATAATTAGTTA AAATATATTAAAAATATTATTAGTAAAATAAAATTTCACACAATAAAAAACAACATAGAGTACACATATTTATATGTATTTTTAAAGATA AAGAATATCTAAAATGTGTTTTTTTCTTAGCTTTTTAGTTGTCTAGAACATTTAGAGAAAGAGTATGAATATATTAAATCCACAAACACA CTATATACTTCCTCACCACTGACTATTTTATCAAATTTGCCTTAAAATAATGAAAAAGAAAAGTATAGTTAATGGTTTCAAATATGCTAA GAAATTGACTCTGCGGAGGGGATCTTAAAATGCCTGTTTACTCATGTTTTCGTATTTTTCTTGTCTCTAATACTTTTGTCTTTGTCTGCC TTGTGTGTTCTTTTCTGAATTTCATTTCAGCAATTTATGCTGCTAAATAGAATCCCGCATGTCTGCATTCATTTACATTCAACTTATTGT AAATTTTGAGATTTTATTTAGAAATGAATTGTCTAATTAATTTATGTAGAGTCCTTTTTTCCAAAGAGCTCAAAACACTACATCCACATT ATTGACTTTTGGAAACCAACCAAATTACTTAAGAAATGGAAAAGTAGTCACAGAGAAATTTAGTAATTTGCAAAAGCCACAACAGTAGTG GAAGAATTAAAATTCATAAAGTCTCATCATTCTGTTGGCTAAAATAATGCTCTTTACAATATGCTGGCTACAAAATGGTCTTACTCTTGA ATTTTGCTTTTGGTTCATATTTTGGTTCTTCATATTCTAGTATGTTTTGTTCCTGCTGAATTTTACAGACTCAGCTAAACAATAAGTTAT TAGTAGTCACTTGTTTTCATTATCATAATTGAATTTCCAAGAACAACTTGATATCATTCAGCTGTCCAAAAAATAATAAGAGCATTCATT AAATACTGATTTTCTTAAACTTAAATGTTGTATTTCATATTTATTTATATAATACAAATGGAAATCAAAACTGAAATAGCCTCCCTTTAG AATGTCACATTTTTCTTAGAAAACATTTTGGAATTGGTTAACCTTATTGGGAATGGATAATTTAGAAACAAACCAAAAAAAAAAAAAGAT ATTTGAAGTGTTTTTATAGGAGATGTATTTTTATCATAGTAAATGATCACAATTTTAAATAATTCATCTTACAAGTCAGGTAAAATAAAA TCGATTCCCAGATTCCATACATTAGGAGTGCAAAGACAGGATCATACACATGACTTATACCTCTCATTTAAATATTTTATAGTATAAAGT ATTTATGGAAAGGGTTTGAGATAGATGATTTTTGGGAAAGGGCAAAATGTGTCAGATGCCCTAGTTAATCATGTAATTTAATTCTGGTAT TGTGAGTGGTTAGCAATCAATTTTGAATTTATAATTCTGCTATTTTAAAAGAAATGTAGTCTTGTAGTATGAAATAATTAAAAATTGTTA >In-frame_ENST00000413276_ENST00000284136_TCGA-FG-5963-01A_DMTF1_chr7_86800405_+_SEMA3D_chr7_84702397_length(amino acids)=763AA_start in transcript=272_stop in transcript=2563 MSMSTVEEDSDTVTVETVNSVTLTQDTEGNLILHCPQNEADEIDSEDSIEPPHKRLCLSSEDDQSIDDSTPCISVVALPLSENDQSFEVT MTATTEVADDEVTEGTVTQIQTECANFIRVLQPYNKTHIYVCGTGAFHPICGYIDLGVYKEDIIFKLDTHNLESGRLKCPFDPQQPFASV MTDEYLYSGTASDFLGKDTAFTRSLGPTHDHHYIRTDISEHYWLNGAKFIGTFFIPDTYNPDDDKIYFFFRESSQEGSTSDKTILSRVGR VCKNDVGGQRSLINKWTTFLKARLICSIPGSDGADTYFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSMADIRAVFNGPYA HKESADHRWVQYDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFIKRHSVMYKSVYPVAGGPTFKRINVDYRLTQIVVDHVIAEDGQY DVMFLGTDIGTVLKVVSISKEKWNMEEVVLEELQIFKHSSIILNMELSLKQQQLYIGSRDGLVQLSLHRCDTYGKACADCCLARDPYCAW DGNACSRYAPTSKRRARRQDVKYGDPITQCWDIEDSISHETADEKVIFGIEFNSTFLECIPKSQQATIKWYIQRSGDEHREELKPDERII KTEYGLLIRSLQKKDSGMYYCKAQEHTFIHTIVKLTLNVIENEQMENTQRAEHEEGKVKDLLAESRLRYKDYIQILSSPNFSLDQYCEQM -------------------------------------------------------------- >In-frame_ENST00000413276_ENST00000444867_TCGA-FG-5963-01A_DMTF1_chr7_86800405_+_SEMA3D_chr7_84702397_length(transcript)=1485nt_BP=605nt GGCGCGGCCGCAGCTCCGTTTCCGGTGGCTCGTCGCGCTCGCTCACTCCAGCTGCAGCCACTCTCGCCCGTGGCTGCTTCCTCCATCCTG GTATTTTTTGGAGCTTCCATCCTGGTTCTTCCAAAGTGCCCGGACCCAAAACAGGAAAGTGTTGCGGAGATAGGAACATGGGAGAGAAAC AATCTGGGTAACATGAAAGTGATGCTGGTTGCTAAGGGAAGGCAACTTGATTCTGTGGGAAGGGCTGTAGCTGATCCATCCGTTGTCTAG ATTTGAGTATGAGCACAGTGGAAGAGGATTCTGACACAGTAACAGTAGAAACTGTGAACTCTGTGACTTTGACTCAGGACACAGAAGGGA ATCTCATTCTTCACTGCCCTCAGAATGAAGCGGATGAAATAGACTCAGAAGATAGTATTGAACCTCCACATAAAAGGCTTTGTTTGTCCT CTGAGGATGATCAGAGTATTGATGATTCTACTCCTTGCATATCAGTTGTTGCACTTCCACTTTCAGAAAATGATCAGAGCTTTGAAGTGA CCATGACTGCAACCACAGAAGTAGCAGATGATGAGGTTACTGAGGGGACTGTGACACAGATACAGACAGAATGTGCAAATTTCATCAGAG TACTTCAGCCCTATAACAAAACTCACATATATGTGTGTGGAACTGGAGCATTTCATCCAATATGTGGGTATATTGATCTTGGAGTCTACA AGGAGGATATTATATTCAAACTAGACACACATAATTTGGAGTCTGGCAGACTGAAATGTCCTTTCGATCCTCAGCAGCCTTTTGCTTCAG TAATGACAGATGAGTACCTCTACTCTGGAACAGCTTCTGATTTCCTTGGCAAAGATACTGCATTCACTCGATCCCTTGGGCCTACTCATG ACCACCACTACATCAGAACTGACATTTCAGAGCACTACTGGCTCAATGGAGCAAAATTTATTGGAACTTTCTTCATACCAGACACCTACA ATCCAGATGATGATAAAATATATTTCTTCTTTCGTGAATCATCTCAAGAAGGCAGTACCTCCGATAAAACCATCCTTTCTCGAGTTGGAA GAGTTTGTAAGGAGAATTTGTGCTTTGAAGATTGATCTTATTTCTGAACATAGTCAAAGTAATTTGGAGCTGTATTTGGAGAAAGTTGCA TAAATGATTTGAACAATGCAAATTTTGGTCAAGAGATATCAATGAAGAGAGACACAATAAATAAACTGACTTAAAAGATAATTTTACTGG GCAATATTGATCAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTTAAACTTAATATGTTTATAATTATACATGGT AGAGCACATTTCCTAATGAATTATTTTTAGTAGTGTTCCTACTTTCCAGTCAAACTACTTACTCTATTTTTCCAATAAATTGTTTAACCT >In-frame_ENST00000413276_ENST00000444867_TCGA-FG-5963-01A_DMTF1_chr7_86800405_+_SEMA3D_chr7_84702397_length(amino acids)=280AA_start in transcript=272_stop in transcript=1114 MSMSTVEEDSDTVTVETVNSVTLTQDTEGNLILHCPQNEADEIDSEDSIEPPHKRLCLSSEDDQSIDDSTPCISVVALPLSENDQSFEVT MTATTEVADDEVTEGTVTQIQTECANFIRVLQPYNKTHIYVCGTGAFHPICGYIDLGVYKEDIIFKLDTHNLESGRLKCPFDPQQPFASV MTDEYLYSGTASDFLGKDTAFTRSLGPTHDHHYIRTDISEHYWLNGAKFIGTFFIPDTYNPDDDKIYFFFRESSQEGSTSDKTILSRVGR -------------------------------------------------------------- >In-frame_ENST00000411766_ENST00000284136_TCGA-FG-5963-01A_DMTF1_chr7_86800405_+_SEMA3D_chr7_84702397_length(transcript)=6311nt_BP=465nt GTTTCCGGTGGCTCGTCGCGCTCGCTCACTCCAGCTGCAGCCACTCTCGCCCGTGGCTGCTTCCTCCATCCTGGTATTTTTTGGAGCTTC CATCCTGGTTCTTCCAAAGTGCCCGGACCCAAAACAGGAAAGTGTTGCGGAGATAGGAACATGGGAGAGAAACAATCTGGGTAACATGAA AGTGATGCTGGTTGCTAAGGGAAGGCAACTTGATTCTGTGGGAAGGGCTGTAGCTGATCCATCCGTTGTCTAGATTTGAGTATGAGCACA GTGGAAGAGGATTCTGACACAGTAACAGTAGAAACTGTGAACTCTGTGACTTTGACTCAGGACACAGAAGGGAATCTCATTCTTCACTGC CCTCAGAATGTTTCAGAAAATGATCAGAGCTTTGAAGTGACCATGACTGCAACCACAGAAGTAGCAGATGATGAGGTTACTGAGGGGACT GTGACACAGATACAGACAGAATGTGCAAATTTCATCAGAGTACTTCAGCCCTATAACAAAACTCACATATATGTGTGTGGAACTGGAGCA TTTCATCCAATATGTGGGTATATTGATCTTGGAGTCTACAAGGAGGATATTATATTCAAACTAGACACACATAATTTGGAGTCTGGCAGA CTGAAATGTCCTTTCGATCCTCAGCAGCCTTTTGCTTCAGTAATGACAGATGAGTACCTCTACTCTGGAACAGCTTCTGATTTCCTTGGC AAAGATACTGCATTCACTCGATCCCTTGGGCCTACTCATGACCACCACTACATCAGAACTGACATTTCAGAGCACTACTGGCTCAATGGA GCAAAATTTATTGGAACTTTCTTCATACCAGACACCTACAATCCAGATGATGATAAAATATATTTCTTCTTTCGTGAATCATCTCAAGAA GGCAGTACCTCCGATAAAACCATCCTTTCTCGAGTTGGAAGAGTTTGTAAGAATGATGTAGGAGGACAACGCAGCCTGATAAACAAGTGG ACGACTTTTCTTAAGGCCAGACTGATTTGCTCAATTCCTGGAAGTGATGGGGCAGATACTTACTTTGATGAGCTTCAAGATATTTATTTA CTCCCCACAAGAGATGAAAGAAATCCTGTAGTATATGGAGTCTTTACTACAACCAGCTCCATCTTCAAAGGCTCTGCTGTTTGTGTGTAT AGCATGGCTGACATCAGAGCAGTTTTTAATGGTCCATATGCTCATAAGGAAAGTGCAGACCATCGTTGGGTGCAGTATGATGGGAGAATT CCTTATCCACGGCCTGGTACATGTCCAAGCAAAACCTATGACCCACTGATTAAGTCCACCCGAGATTTTCCAGATGATGTCATCAGTTTC ATAAAGCGGCACTCTGTGATGTATAAGTCCGTATACCCAGTTGCAGGAGGACCAACGTTCAAGAGAATCAATGTGGATTACAGACTGACA CAGATAGTGGTGGATCATGTCATTGCAGAAGATGGCCAGTACGATGTAATGTTTCTTGGAACAGACATTGGAACTGTCCTCAAAGTTGTC AGCATTTCAAAGGAAAAGTGGAATATGGAAGAGGTAGTGCTGGAGGAGTTGCAGATATTCAAGCACTCATCAATCATCTTGAACATGGAA TTGTCTCTGAAGCAGCAACAATTGTACATTGGTTCCCGAGATGGATTGGTTCAGCTCTCCTTGCACAGATGCGACACTTATGGGAAAGCT TGCGCAGACTGTTGTCTTGCCAGAGACCCCTACTGTGCCTGGGATGGAAATGCATGCTCTCGATATGCTCCTACTTCTAAAAGGAGAGCT AGACGCCAAGATGTAAAATATGGCGACCCAATCACCCAGTGCTGGGACATCGAAGACAGCATTAGTCATGAAACTGCTGATGAAAAGGTG ATTTTTGGCATTGAATTTAACTCAACCTTTCTGGAATGTATACCTAAATCCCAACAAGCAACTATTAAATGGTATATCCAGAGGTCAGGG GATGAGCATCGAGAGGAGTTGAAGCCCGATGAAAGAATCATCAAAACGGAATATGGGCTACTGATTCGAAGTTTGCAGAAGAAGGATTCT GGGATGTATTACTGCAAAGCCCAGGAGCACACTTTCATCCACACCATAGTGAAGCTGACTTTGAATGTCATTGAGAATGAACAGATGGAA AATACCCAGAGGGCAGAGCATGAGGAGGGGAAGGTCAAGGATCTATTGGCTGAGTCACGGTTGAGATACAAAGACTACATCCAAATCCTT AGCAGCCCAAACTTCAGCCTCGACCAGTACTGCGAACAGATGTGGCACAGGGAGAAGCGGAGACAGAGAAACAAGGGGGGCCCAAAGTGG AAGCACATGCAGGAAATGAAGAAGAAACGAAATCGAAGACATCACAGAGACCTGGATGAGCTCCCTAGAGCTGTAGCCACGTAGTTTTCT ACTTAATTTAAAGAAAAGAATTCCTTACCTATAAAAACATTGCCTTCTGTTTTGTATATCCCTTATAGTAATTCATAAATGCTTCCCATG GAGTTTTGCTAAGGCACAAGACAATAATCTGAATAAGACAATATGTGATGAATATAAGAAAGGGCAAAAAATTCATTTGAACCAGTTTTC CAAGAACAAATCTTGCACAAGCAAAGTATAAGAATTATCCTAAAAATAGGGGGTTTACAGTTGTAAATGTTTTATGTTTTGAGTTTTGGA ATTTATTGTCATGTAAATAGTTGAGCTAAGCAAGCCCCGAATTTGATAGTGTATAAGGTGCTTTATTCCCTCGAATGTCCATTAAGCATG GAATTTACCATGCAGTTGTGCTATGTTCTTATGAACAGATATATCATTCCTATTGAGAACCAGCTACCTTGTGGTAGGGAATAAGAGGTC AGACACAAATTAAGACAACTCCCATTATCAACAGGAACTTTCTCAGTGAGCCATTCACTCCTGGAGAATGGTATAGGAATTTGGAGAGGT GCATTATTTCTTTCTGGCCACTGGGGTTAAATTTAGTGTACTACAACATTGATTTACTGAAGGGCACTAATGTTTCCCCCAGGATTTCTA TTGACTAGTCAGGAGTAACAGGTTCACAGAGAGAAGTTGGTGCTTAGTTATGTGTTTTTTAGAGTATATACTAAGCTCTACAGGGACAGA ATGCTTAATAAATACTTTAATAAGATATGGGAAAATATTTTAATAAAACAAGGAAAACATAATGATGTATAATGCATCCTGATGGGAAGG CATGCAGATGGGATTTGTTAGAAGACAGAAGGAAAGACAGCCATAAATTCTGGCTTTGGGGAAAACTCATATCCCCATGAAAAGGAAGAA CAATCACAAATAAAGTGAGAGTAATGTAATGGAGCTCTTTTCACTAGGGTATAAGTAGCTGCCAATTTGTAATTCATCTGTTAAAAAAAA TCTAGATTATAACAAACTGCTAGCAAAATCTGAGGAAACATAAATTCTTCTGAAGAATCATAGGAAGAGTAGACATTTTATTTATAACCA ATGATATTTCAGTATATATTTTCTCTCTTTTAAAAAATATTTATCATACTCTGTATATTATTTCTTTTTACTGCCTTTATTCTCTCCTGT ATATTGGATTTTGTGATTATATTTGAGTGAATAGGAGAAAACAATATATAACACACAGAGAATTAAGAAAATGACATTTCTGGGGAGTGG GGATATATATTTGTTGAATAACAGAACGAGTGTAAAATTTTAACAACGGAAAGGGTTAAATTAACTCTTTGACATCTTCACTCAACCTTT TCTCATTGCTGAGTTAATCTGTTGTAATTGTAGTATTGTTTTTGTAATTTAACAATAAATAAGCCTGCTACATGTAAAAAGAACCAAACT CACAATATTAACATAAACATCTTTCATATTTTGTTAGTACTTTCAAATGTTTTCAATTTGACTTTCCCTCTGAATATGCATGGTGTGTTT CCTGTCTGTTTAAGCAGAACTCACCTTTCCTTCTTGTAACACAGAACCCTTAGCCTTCTTCTGTTTTGCCTTTTCACGCCCTTTATAGTG TGAAATGAAAAATTAGTCACTTCCTCACATGGAAGGCAGCTTTTCAGAAAATAACAGACATTGCTCGTTTCTCATGCATTCTACATATCT TGAAAGAAAAGTCTGTGAGAAAACCCTGTGATTAGAGGGCAACTTAATGCAAGATCTGTGGCTCTATGTTGAGAGCATTCTCTCTCTGTT ATTTTTATTTTATTTGCATTGCTTACCTATCTCAAAGTAGTCAAACTGATATATGAGATTGAGTACTCCCTTTTGATATTATACTGATGA ATATTTGTAGGTGTTTCACTATAAGGAACAGCTAAGGAATAATTTTAATAAAAGTGAACCAGAACAAATCACTCATTTAAAAAGTAATTC AGAAGAACAGTGTGGCATGATCAGACTTCTAATTGAATAGCGTAACAACAGTGTTTGTAATTATAGATTTGCTTGGACAAAATATTCCAG GAACTCATAGCGAGCTCAAAGCAATTAAGTGGGAACATTTTTAATTTAAAAAAAATTTCCAAATATTTGTGGGTCCGACAGTAATGATCA AAATATGAATGACTTTGGAAAATTTACATGAAGCTCAAGTGTTAGGATTGACTTATGAAAATAAATTTTATTTCTATCCAAATTTGAATG TCCAAACCATTTTTTAGTTACTTCTTTCTAATCCTAGTTATTCAGACAAAATTTGGAAACTTATTTTATGACCACATCTAATATTCTGGC TGCTTTGGATACAATACTCTTGATTTATGATAATTAGTTAAAATATATTAAAAATATTATTAGTAAAATAAAATTTCACACAATAAAAAA CAACATAGAGTACACATATTTATATGTATTTTTAAAGATAAAGAATATCTAAAATGTGTTTTTTTCTTAGCTTTTTAGTTGTCTAGAACA TTTAGAGAAAGAGTATGAATATATTAAATCCACAAACACACTATATACTTCCTCACCACTGACTATTTTATCAAATTTGCCTTAAAATAA TGAAAAAGAAAAGTATAGTTAATGGTTTCAAATATGCTAAGAAATTGACTCTGCGGAGGGGATCTTAAAATGCCTGTTTACTCATGTTTT CGTATTTTTCTTGTCTCTAATACTTTTGTCTTTGTCTGCCTTGTGTGTTCTTTTCTGAATTTCATTTCAGCAATTTATGCTGCTAAATAG AATCCCGCATGTCTGCATTCATTTACATTCAACTTATTGTAAATTTTGAGATTTTATTTAGAAATGAATTGTCTAATTAATTTATGTAGA GTCCTTTTTTCCAAAGAGCTCAAAACACTACATCCACATTATTGACTTTTGGAAACCAACCAAATTACTTAAGAAATGGAAAAGTAGTCA CAGAGAAATTTAGTAATTTGCAAAAGCCACAACAGTAGTGGAAGAATTAAAATTCATAAAGTCTCATCATTCTGTTGGCTAAAATAATGC TCTTTACAATATGCTGGCTACAAAATGGTCTTACTCTTGAATTTTGCTTTTGGTTCATATTTTGGTTCTTCATATTCTAGTATGTTTTGT TCCTGCTGAATTTTACAGACTCAGCTAAACAATAAGTTATTAGTAGTCACTTGTTTTCATTATCATAATTGAATTTCCAAGAACAACTTG ATATCATTCAGCTGTCCAAAAAATAATAAGAGCATTCATTAAATACTGATTTTCTTAAACTTAAATGTTGTATTTCATATTTATTTATAT AATACAAATGGAAATCAAAACTGAAATAGCCTCCCTTTAGAATGTCACATTTTTCTTAGAAAACATTTTGGAATTGGTTAACCTTATTGG GAATGGATAATTTAGAAACAAACCAAAAAAAAAAAAAGATATTTGAAGTGTTTTTATAGGAGATGTATTTTTATCATAGTAAATGATCAC AATTTTAAATAATTCATCTTACAAGTCAGGTAAAATAAAATCGATTCCCAGATTCCATACATTAGGAGTGCAAAGACAGGATCATACACA TGACTTATACCTCTCATTTAAATATTTTATAGTATAAAGTATTTATGGAAAGGGTTTGAGATAGATGATTTTTGGGAAAGGGCAAAATGT GTCAGATGCCCTAGTTAATCATGTAATTTAATTCTGGTATTGTGAGTGGTTAGCAATCAATTTTGAATTTATAATTCTGCTATTTTAAAA GAAATGTAGTCTTGTAGTATGAAATAATTAAAAATTGTTAAATGTATATTTTGGTTGTATTATAATAAAATGCAAACATGACTGTTCTAT >In-frame_ENST00000411766_ENST00000284136_TCGA-FG-5963-01A_DMTF1_chr7_86800405_+_SEMA3D_chr7_84702397_length(amino acids)=722AA_start in transcript=255_stop in transcript=2423 MSMSTVEEDSDTVTVETVNSVTLTQDTEGNLILHCPQNVSENDQSFEVTMTATTEVADDEVTEGTVTQIQTECANFIRVLQPYNKTHIYV CGTGAFHPICGYIDLGVYKEDIIFKLDTHNLESGRLKCPFDPQQPFASVMTDEYLYSGTASDFLGKDTAFTRSLGPTHDHHYIRTDISEH YWLNGAKFIGTFFIPDTYNPDDDKIYFFFRESSQEGSTSDKTILSRVGRVCKNDVGGQRSLINKWTTFLKARLICSIPGSDGADTYFDEL QDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSMADIRAVFNGPYAHKESADHRWVQYDGRIPYPRPGTCPSKTYDPLIKSTRDFPD DVISFIKRHSVMYKSVYPVAGGPTFKRINVDYRLTQIVVDHVIAEDGQYDVMFLGTDIGTVLKVVSISKEKWNMEEVVLEELQIFKHSSI ILNMELSLKQQQLYIGSRDGLVQLSLHRCDTYGKACADCCLARDPYCAWDGNACSRYAPTSKRRARRQDVKYGDPITQCWDIEDSISHET ADEKVIFGIEFNSTFLECIPKSQQATIKWYIQRSGDEHREELKPDERIIKTEYGLLIRSLQKKDSGMYYCKAQEHTFIHTIVKLTLNVIE NEQMENTQRAEHEEGKVKDLLAESRLRYKDYIQILSSPNFSLDQYCEQMWHREKRRQRNKGGPKWKHMQEMKKKRNRRHHRDLDELPRAV -------------------------------------------------------------- >In-frame_ENST00000411766_ENST00000444867_TCGA-FG-5963-01A_DMTF1_chr7_86800405_+_SEMA3D_chr7_84702397_length(transcript)=1345nt_BP=465nt GTTTCCGGTGGCTCGTCGCGCTCGCTCACTCCAGCTGCAGCCACTCTCGCCCGTGGCTGCTTCCTCCATCCTGGTATTTTTTGGAGCTTC CATCCTGGTTCTTCCAAAGTGCCCGGACCCAAAACAGGAAAGTGTTGCGGAGATAGGAACATGGGAGAGAAACAATCTGGGTAACATGAA AGTGATGCTGGTTGCTAAGGGAAGGCAACTTGATTCTGTGGGAAGGGCTGTAGCTGATCCATCCGTTGTCTAGATTTGAGTATGAGCACA GTGGAAGAGGATTCTGACACAGTAACAGTAGAAACTGTGAACTCTGTGACTTTGACTCAGGACACAGAAGGGAATCTCATTCTTCACTGC CCTCAGAATGTTTCAGAAAATGATCAGAGCTTTGAAGTGACCATGACTGCAACCACAGAAGTAGCAGATGATGAGGTTACTGAGGGGACT GTGACACAGATACAGACAGAATGTGCAAATTTCATCAGAGTACTTCAGCCCTATAACAAAACTCACATATATGTGTGTGGAACTGGAGCA TTTCATCCAATATGTGGGTATATTGATCTTGGAGTCTACAAGGAGGATATTATATTCAAACTAGACACACATAATTTGGAGTCTGGCAGA CTGAAATGTCCTTTCGATCCTCAGCAGCCTTTTGCTTCAGTAATGACAGATGAGTACCTCTACTCTGGAACAGCTTCTGATTTCCTTGGC AAAGATACTGCATTCACTCGATCCCTTGGGCCTACTCATGACCACCACTACATCAGAACTGACATTTCAGAGCACTACTGGCTCAATGGA GCAAAATTTATTGGAACTTTCTTCATACCAGACACCTACAATCCAGATGATGATAAAATATATTTCTTCTTTCGTGAATCATCTCAAGAA GGCAGTACCTCCGATAAAACCATCCTTTCTCGAGTTGGAAGAGTTTGTAAGGAGAATTTGTGCTTTGAAGATTGATCTTATTTCTGAACA TAGTCAAAGTAATTTGGAGCTGTATTTGGAGAAAGTTGCATAAATGATTTGAACAATGCAAATTTTGGTCAAGAGATATCAATGAAGAGA GACACAATAAATAAACTGACTTAAAAGATAATTTTACTGGGCAATATTGATCAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAG AATATCTTTTAAACTTAATATGTTTATAATTATACATGGTAGAGCACATTTCCTAATGAATTATTTTTAGTAGTGTTCCTACTTTCCAGT >In-frame_ENST00000411766_ENST00000444867_TCGA-FG-5963-01A_DMTF1_chr7_86800405_+_SEMA3D_chr7_84702397_length(amino acids)=239AA_start in transcript=255_stop in transcript=974 MSMSTVEEDSDTVTVETVNSVTLTQDTEGNLILHCPQNVSENDQSFEVTMTATTEVADDEVTEGTVTQIQTECANFIRVLQPYNKTHIYV CGTGAFHPICGYIDLGVYKEDIIFKLDTHNLESGRLKCPFDPQQPFASVMTDEYLYSGTASDFLGKDTAFTRSLGPTHDHHYIRTDISEH -------------------------------------------------------------- >In-frame_ENST00000432937_ENST00000284136_TCGA-FG-5963-01A_DMTF1_chr7_86800405_+_SEMA3D_chr7_84702397_length(transcript)=6275nt_BP=429nt ACTCTCGCCCGTGGCTGCTTCCTCCATCCTGGTATTTTTTGGAGCTTCCATCCTGGTTCTTCCAAAGTGCCCGGACCCAAAACAGGAAAG TGTTGCGGAGATAGGAACATGGGAGAGAAACAATCTGGGTAACATGAAAGTGATGCTGGTTGCTAAGGGAAGGCAACTTGATTCTGTGGG AAGGGCTGTAGCTGATCCATCCGTTGTCTAGAAGCGGATGAAATAGACTCAGAAGATAGTATTGAACCTCCACATAAAAGGCTTTGTTTG TCCTCTGAGGATGATCAGAGTATTGATGATTCTACTCCTTGCATATCAGTTGTTGCACTTCCACTTTCAGAAAATGATCAGAGCTTTGAA GTGACCATGACTGCAACCACAGAAGTAGCAGATGATGAGGTTACTGAGGGGACTGTGACACAGATACAGACAGAATGTGCAAATTTCATC AGAGTACTTCAGCCCTATAACAAAACTCACATATATGTGTGTGGAACTGGAGCATTTCATCCAATATGTGGGTATATTGATCTTGGAGTC TACAAGGAGGATATTATATTCAAACTAGACACACATAATTTGGAGTCTGGCAGACTGAAATGTCCTTTCGATCCTCAGCAGCCTTTTGCT TCAGTAATGACAGATGAGTACCTCTACTCTGGAACAGCTTCTGATTTCCTTGGCAAAGATACTGCATTCACTCGATCCCTTGGGCCTACT CATGACCACCACTACATCAGAACTGACATTTCAGAGCACTACTGGCTCAATGGAGCAAAATTTATTGGAACTTTCTTCATACCAGACACC TACAATCCAGATGATGATAAAATATATTTCTTCTTTCGTGAATCATCTCAAGAAGGCAGTACCTCCGATAAAACCATCCTTTCTCGAGTT GGAAGAGTTTGTAAGAATGATGTAGGAGGACAACGCAGCCTGATAAACAAGTGGACGACTTTTCTTAAGGCCAGACTGATTTGCTCAATT CCTGGAAGTGATGGGGCAGATACTTACTTTGATGAGCTTCAAGATATTTATTTACTCCCCACAAGAGATGAAAGAAATCCTGTAGTATAT GGAGTCTTTACTACAACCAGCTCCATCTTCAAAGGCTCTGCTGTTTGTGTGTATAGCATGGCTGACATCAGAGCAGTTTTTAATGGTCCA TATGCTCATAAGGAAAGTGCAGACCATCGTTGGGTGCAGTATGATGGGAGAATTCCTTATCCACGGCCTGGTACATGTCCAAGCAAAACC TATGACCCACTGATTAAGTCCACCCGAGATTTTCCAGATGATGTCATCAGTTTCATAAAGCGGCACTCTGTGATGTATAAGTCCGTATAC CCAGTTGCAGGAGGACCAACGTTCAAGAGAATCAATGTGGATTACAGACTGACACAGATAGTGGTGGATCATGTCATTGCAGAAGATGGC CAGTACGATGTAATGTTTCTTGGAACAGACATTGGAACTGTCCTCAAAGTTGTCAGCATTTCAAAGGAAAAGTGGAATATGGAAGAGGTA GTGCTGGAGGAGTTGCAGATATTCAAGCACTCATCAATCATCTTGAACATGGAATTGTCTCTGAAGCAGCAACAATTGTACATTGGTTCC CGAGATGGATTGGTTCAGCTCTCCTTGCACAGATGCGACACTTATGGGAAAGCTTGCGCAGACTGTTGTCTTGCCAGAGACCCCTACTGT GCCTGGGATGGAAATGCATGCTCTCGATATGCTCCTACTTCTAAAAGGAGAGCTAGACGCCAAGATGTAAAATATGGCGACCCAATCACC CAGTGCTGGGACATCGAAGACAGCATTAGTCATGAAACTGCTGATGAAAAGGTGATTTTTGGCATTGAATTTAACTCAACCTTTCTGGAA TGTATACCTAAATCCCAACAAGCAACTATTAAATGGTATATCCAGAGGTCAGGGGATGAGCATCGAGAGGAGTTGAAGCCCGATGAAAGA ATCATCAAAACGGAATATGGGCTACTGATTCGAAGTTTGCAGAAGAAGGATTCTGGGATGTATTACTGCAAAGCCCAGGAGCACACTTTC ATCCACACCATAGTGAAGCTGACTTTGAATGTCATTGAGAATGAACAGATGGAAAATACCCAGAGGGCAGAGCATGAGGAGGGGAAGGTC AAGGATCTATTGGCTGAGTCACGGTTGAGATACAAAGACTACATCCAAATCCTTAGCAGCCCAAACTTCAGCCTCGACCAGTACTGCGAA CAGATGTGGCACAGGGAGAAGCGGAGACAGAGAAACAAGGGGGGCCCAAAGTGGAAGCACATGCAGGAAATGAAGAAGAAACGAAATCGA AGACATCACAGAGACCTGGATGAGCTCCCTAGAGCTGTAGCCACGTAGTTTTCTACTTAATTTAAAGAAAAGAATTCCTTACCTATAAAA ACATTGCCTTCTGTTTTGTATATCCCTTATAGTAATTCATAAATGCTTCCCATGGAGTTTTGCTAAGGCACAAGACAATAATCTGAATAA GACAATATGTGATGAATATAAGAAAGGGCAAAAAATTCATTTGAACCAGTTTTCCAAGAACAAATCTTGCACAAGCAAAGTATAAGAATT ATCCTAAAAATAGGGGGTTTACAGTTGTAAATGTTTTATGTTTTGAGTTTTGGAATTTATTGTCATGTAAATAGTTGAGCTAAGCAAGCC CCGAATTTGATAGTGTATAAGGTGCTTTATTCCCTCGAATGTCCATTAAGCATGGAATTTACCATGCAGTTGTGCTATGTTCTTATGAAC AGATATATCATTCCTATTGAGAACCAGCTACCTTGTGGTAGGGAATAAGAGGTCAGACACAAATTAAGACAACTCCCATTATCAACAGGA ACTTTCTCAGTGAGCCATTCACTCCTGGAGAATGGTATAGGAATTTGGAGAGGTGCATTATTTCTTTCTGGCCACTGGGGTTAAATTTAG TGTACTACAACATTGATTTACTGAAGGGCACTAATGTTTCCCCCAGGATTTCTATTGACTAGTCAGGAGTAACAGGTTCACAGAGAGAAG TTGGTGCTTAGTTATGTGTTTTTTAGAGTATATACTAAGCTCTACAGGGACAGAATGCTTAATAAATACTTTAATAAGATATGGGAAAAT ATTTTAATAAAACAAGGAAAACATAATGATGTATAATGCATCCTGATGGGAAGGCATGCAGATGGGATTTGTTAGAAGACAGAAGGAAAG ACAGCCATAAATTCTGGCTTTGGGGAAAACTCATATCCCCATGAAAAGGAAGAACAATCACAAATAAAGTGAGAGTAATGTAATGGAGCT CTTTTCACTAGGGTATAAGTAGCTGCCAATTTGTAATTCATCTGTTAAAAAAAATCTAGATTATAACAAACTGCTAGCAAAATCTGAGGA AACATAAATTCTTCTGAAGAATCATAGGAAGAGTAGACATTTTATTTATAACCAATGATATTTCAGTATATATTTTCTCTCTTTTAAAAA ATATTTATCATACTCTGTATATTATTTCTTTTTACTGCCTTTATTCTCTCCTGTATATTGGATTTTGTGATTATATTTGAGTGAATAGGA GAAAACAATATATAACACACAGAGAATTAAGAAAATGACATTTCTGGGGAGTGGGGATATATATTTGTTGAATAACAGAACGAGTGTAAA ATTTTAACAACGGAAAGGGTTAAATTAACTCTTTGACATCTTCACTCAACCTTTTCTCATTGCTGAGTTAATCTGTTGTAATTGTAGTAT TGTTTTTGTAATTTAACAATAAATAAGCCTGCTACATGTAAAAAGAACCAAACTCACAATATTAACATAAACATCTTTCATATTTTGTTA GTACTTTCAAATGTTTTCAATTTGACTTTCCCTCTGAATATGCATGGTGTGTTTCCTGTCTGTTTAAGCAGAACTCACCTTTCCTTCTTG TAACACAGAACCCTTAGCCTTCTTCTGTTTTGCCTTTTCACGCCCTTTATAGTGTGAAATGAAAAATTAGTCACTTCCTCACATGGAAGG CAGCTTTTCAGAAAATAACAGACATTGCTCGTTTCTCATGCATTCTACATATCTTGAAAGAAAAGTCTGTGAGAAAACCCTGTGATTAGA GGGCAACTTAATGCAAGATCTGTGGCTCTATGTTGAGAGCATTCTCTCTCTGTTATTTTTATTTTATTTGCATTGCTTACCTATCTCAAA GTAGTCAAACTGATATATGAGATTGAGTACTCCCTTTTGATATTATACTGATGAATATTTGTAGGTGTTTCACTATAAGGAACAGCTAAG GAATAATTTTAATAAAAGTGAACCAGAACAAATCACTCATTTAAAAAGTAATTCAGAAGAACAGTGTGGCATGATCAGACTTCTAATTGA ATAGCGTAACAACAGTGTTTGTAATTATAGATTTGCTTGGACAAAATATTCCAGGAACTCATAGCGAGCTCAAAGCAATTAAGTGGGAAC ATTTTTAATTTAAAAAAAATTTCCAAATATTTGTGGGTCCGACAGTAATGATCAAAATATGAATGACTTTGGAAAATTTACATGAAGCTC AAGTGTTAGGATTGACTTATGAAAATAAATTTTATTTCTATCCAAATTTGAATGTCCAAACCATTTTTTAGTTACTTCTTTCTAATCCTA GTTATTCAGACAAAATTTGGAAACTTATTTTATGACCACATCTAATATTCTGGCTGCTTTGGATACAATACTCTTGATTTATGATAATTA GTTAAAATATATTAAAAATATTATTAGTAAAATAAAATTTCACACAATAAAAAACAACATAGAGTACACATATTTATATGTATTTTTAAA GATAAAGAATATCTAAAATGTGTTTTTTTCTTAGCTTTTTAGTTGTCTAGAACATTTAGAGAAAGAGTATGAATATATTAAATCCACAAA CACACTATATACTTCCTCACCACTGACTATTTTATCAAATTTGCCTTAAAATAATGAAAAAGAAAAGTATAGTTAATGGTTTCAAATATG CTAAGAAATTGACTCTGCGGAGGGGATCTTAAAATGCCTGTTTACTCATGTTTTCGTATTTTTCTTGTCTCTAATACTTTTGTCTTTGTC TGCCTTGTGTGTTCTTTTCTGAATTTCATTTCAGCAATTTATGCTGCTAAATAGAATCCCGCATGTCTGCATTCATTTACATTCAACTTA TTGTAAATTTTGAGATTTTATTTAGAAATGAATTGTCTAATTAATTTATGTAGAGTCCTTTTTTCCAAAGAGCTCAAAACACTACATCCA CATTATTGACTTTTGGAAACCAACCAAATTACTTAAGAAATGGAAAAGTAGTCACAGAGAAATTTAGTAATTTGCAAAAGCCACAACAGT AGTGGAAGAATTAAAATTCATAAAGTCTCATCATTCTGTTGGCTAAAATAATGCTCTTTACAATATGCTGGCTACAAAATGGTCTTACTC TTGAATTTTGCTTTTGGTTCATATTTTGGTTCTTCATATTCTAGTATGTTTTGTTCCTGCTGAATTTTACAGACTCAGCTAAACAATAAG TTATTAGTAGTCACTTGTTTTCATTATCATAATTGAATTTCCAAGAACAACTTGATATCATTCAGCTGTCCAAAAAATAATAAGAGCATT CATTAAATACTGATTTTCTTAAACTTAAATGTTGTATTTCATATTTATTTATATAATACAAATGGAAATCAAAACTGAAATAGCCTCCCT TTAGAATGTCACATTTTTCTTAGAAAACATTTTGGAATTGGTTAACCTTATTGGGAATGGATAATTTAGAAACAAACCAAAAAAAAAAAA AGATATTTGAAGTGTTTTTATAGGAGATGTATTTTTATCATAGTAAATGATCACAATTTTAAATAATTCATCTTACAAGTCAGGTAAAAT AAAATCGATTCCCAGATTCCATACATTAGGAGTGCAAAGACAGGATCATACACATGACTTATACCTCTCATTTAAATATTTTATAGTATA AAGTATTTATGGAAAGGGTTTGAGATAGATGATTTTTGGGAAAGGGCAAAATGTGTCAGATGCCCTAGTTAATCATGTAATTTAATTCTG GTATTGTGAGTGGTTAGCAATCAATTTTGAATTTATAATTCTGCTATTTTAAAAGAAATGTAGTCTTGTAGTATGAAATAATTAAAAATT >In-frame_ENST00000432937_ENST00000284136_TCGA-FG-5963-01A_DMTF1_chr7_86800405_+_SEMA3D_chr7_84702397_length(amino acids)=706AA_start in transcript=267_stop in transcript=2387 MSSEDDQSIDDSTPCISVVALPLSENDQSFEVTMTATTEVADDEVTEGTVTQIQTECANFIRVLQPYNKTHIYVCGTGAFHPICGYIDLG VYKEDIIFKLDTHNLESGRLKCPFDPQQPFASVMTDEYLYSGTASDFLGKDTAFTRSLGPTHDHHYIRTDISEHYWLNGAKFIGTFFIPD TYNPDDDKIYFFFRESSQEGSTSDKTILSRVGRVCKNDVGGQRSLINKWTTFLKARLICSIPGSDGADTYFDELQDIYLLPTRDERNPVV YGVFTTTSSIFKGSAVCVYSMADIRAVFNGPYAHKESADHRWVQYDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFIKRHSVMYKSV YPVAGGPTFKRINVDYRLTQIVVDHVIAEDGQYDVMFLGTDIGTVLKVVSISKEKWNMEEVVLEELQIFKHSSIILNMELSLKQQQLYIG SRDGLVQLSLHRCDTYGKACADCCLARDPYCAWDGNACSRYAPTSKRRARRQDVKYGDPITQCWDIEDSISHETADEKVIFGIEFNSTFL ECIPKSQQATIKWYIQRSGDEHREELKPDERIIKTEYGLLIRSLQKKDSGMYYCKAQEHTFIHTIVKLTLNVIENEQMENTQRAEHEEGK -------------------------------------------------------------- >In-frame_ENST00000432937_ENST00000444867_TCGA-FG-5963-01A_DMTF1_chr7_86800405_+_SEMA3D_chr7_84702397_length(transcript)=1309nt_BP=429nt ACTCTCGCCCGTGGCTGCTTCCTCCATCCTGGTATTTTTTGGAGCTTCCATCCTGGTTCTTCCAAAGTGCCCGGACCCAAAACAGGAAAG TGTTGCGGAGATAGGAACATGGGAGAGAAACAATCTGGGTAACATGAAAGTGATGCTGGTTGCTAAGGGAAGGCAACTTGATTCTGTGGG AAGGGCTGTAGCTGATCCATCCGTTGTCTAGAAGCGGATGAAATAGACTCAGAAGATAGTATTGAACCTCCACATAAAAGGCTTTGTTTG TCCTCTGAGGATGATCAGAGTATTGATGATTCTACTCCTTGCATATCAGTTGTTGCACTTCCACTTTCAGAAAATGATCAGAGCTTTGAA GTGACCATGACTGCAACCACAGAAGTAGCAGATGATGAGGTTACTGAGGGGACTGTGACACAGATACAGACAGAATGTGCAAATTTCATC AGAGTACTTCAGCCCTATAACAAAACTCACATATATGTGTGTGGAACTGGAGCATTTCATCCAATATGTGGGTATATTGATCTTGGAGTC TACAAGGAGGATATTATATTCAAACTAGACACACATAATTTGGAGTCTGGCAGACTGAAATGTCCTTTCGATCCTCAGCAGCCTTTTGCT TCAGTAATGACAGATGAGTACCTCTACTCTGGAACAGCTTCTGATTTCCTTGGCAAAGATACTGCATTCACTCGATCCCTTGGGCCTACT CATGACCACCACTACATCAGAACTGACATTTCAGAGCACTACTGGCTCAATGGAGCAAAATTTATTGGAACTTTCTTCATACCAGACACC TACAATCCAGATGATGATAAAATATATTTCTTCTTTCGTGAATCATCTCAAGAAGGCAGTACCTCCGATAAAACCATCCTTTCTCGAGTT GGAAGAGTTTGTAAGGAGAATTTGTGCTTTGAAGATTGATCTTATTTCTGAACATAGTCAAAGTAATTTGGAGCTGTATTTGGAGAAAGT TGCATAAATGATTTGAACAATGCAAATTTTGGTCAAGAGATATCAATGAAGAGAGACACAATAAATAAACTGACTTAAAAGATAATTTTA CTGGGCAATATTGATCAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTTAAACTTAATATGTTTATAATTATACA TGGTAGAGCACATTTCCTAATGAATTATTTTTAGTAGTGTTCCTACTTTCCAGTCAAACTACTTACTCTATTTTTCCAATAAATTGTTTA >In-frame_ENST00000432937_ENST00000444867_TCGA-FG-5963-01A_DMTF1_chr7_86800405_+_SEMA3D_chr7_84702397_length(amino acids)=223AA_start in transcript=267_stop in transcript=938 MSSEDDQSIDDSTPCISVVALPLSENDQSFEVTMTATTEVADDEVTEGTVTQIQTECANFIRVLQPYNKTHIYVCGTGAFHPICGYIDLG VYKEDIIFKLDTHNLESGRLKCPFDPQQPFASVMTDEYLYSGTASDFLGKDTAFTRSLGPTHDHHYIRTDISEHYWLNGAKFIGTFFIPD -------------------------------------------------------------- >In-frame_ENST00000394703_ENST00000284136_TCGA-FG-5963-01A_DMTF1_chr7_86800405_+_SEMA3D_chr7_84702397_length(transcript)=6736nt_BP=890nt AAGTAAGTGCGATGGAACCTTCAGGTTCCAACCGCCGCCAGGGCCGCTCCGCCCAGTGGAGCCTGTCCGGCCCCCTTGCTGCCCGCTAGC TCCCGCCGGCTGGCGCAAGCTGTCGGCGCCGGGGCACTGCGGGCGGGGTCGGAGCCTGGCCTTCCTGACGTTGCAGCTGCCGTCCCCGCA CGTTCCGGCCAGGGCCTCCCTCTTAGGGCCGGGCGGTGCCCGTGGCTCAGGCTGCAGAGTAGAAAGCACAAAAACCAGCCTGATTGTATC TGGAAAAAACCATTATGTTACAGTTGATAGGCTCACCCCAAAATATGCTTTTGGGGACTGATTTAGCACCTGCATATTCTGCGTGAATCT CTTTAATTGGTTGCAGTTGAGCTAATGGTGGAGCCAAAATGCTATTGCCCTGTCTTCATCAACATTTAATCAAGTGTTGCGGAGATAGGA ACATGGGAGAGAAACAATCTGGGTAACATGAAAGTGATGCTGGTTGCTAAGGGAAGGCAACTTGATTCTGTGGGAAGGGCTGTAGCTGAT CCATCCGTTGTCTAGATTTGAGTATGAGCACAGTGGAAGAGGATTCTGACACAGTAACAGTAGAAACTGTGAACTCTGTGACTTTGACTC AGGACACAGAAGGGAATCTCATTCTTCACTGCCCTCAGAATGAAGCGGATGAAATAGACTCAGAAGATAGTATTGAACCTCCACATAAAA GGCTTTGTTTGTCCTCTGAGGATGATCAGAGTATTGATGATTCTACTCCTTGCATATCAGTTGTTGCACTTCCACTTTCAGAAAATGATC AGAGCTTTGAAGTGACCATGACTGCAACCACAGAAGTAGCAGATGATGAGGTTACTGAGGGGACTGTGACACAGATACAGACAGAATGTG CAAATTTCATCAGAGTACTTCAGCCCTATAACAAAACTCACATATATGTGTGTGGAACTGGAGCATTTCATCCAATATGTGGGTATATTG ATCTTGGAGTCTACAAGGAGGATATTATATTCAAACTAGACACACATAATTTGGAGTCTGGCAGACTGAAATGTCCTTTCGATCCTCAGC AGCCTTTTGCTTCAGTAATGACAGATGAGTACCTCTACTCTGGAACAGCTTCTGATTTCCTTGGCAAAGATACTGCATTCACTCGATCCC TTGGGCCTACTCATGACCACCACTACATCAGAACTGACATTTCAGAGCACTACTGGCTCAATGGAGCAAAATTTATTGGAACTTTCTTCA TACCAGACACCTACAATCCAGATGATGATAAAATATATTTCTTCTTTCGTGAATCATCTCAAGAAGGCAGTACCTCCGATAAAACCATCC TTTCTCGAGTTGGAAGAGTTTGTAAGAATGATGTAGGAGGACAACGCAGCCTGATAAACAAGTGGACGACTTTTCTTAAGGCCAGACTGA TTTGCTCAATTCCTGGAAGTGATGGGGCAGATACTTACTTTGATGAGCTTCAAGATATTTATTTACTCCCCACAAGAGATGAAAGAAATC CTGTAGTATATGGAGTCTTTACTACAACCAGCTCCATCTTCAAAGGCTCTGCTGTTTGTGTGTATAGCATGGCTGACATCAGAGCAGTTT TTAATGGTCCATATGCTCATAAGGAAAGTGCAGACCATCGTTGGGTGCAGTATGATGGGAGAATTCCTTATCCACGGCCTGGTACATGTC CAAGCAAAACCTATGACCCACTGATTAAGTCCACCCGAGATTTTCCAGATGATGTCATCAGTTTCATAAAGCGGCACTCTGTGATGTATA AGTCCGTATACCCAGTTGCAGGAGGACCAACGTTCAAGAGAATCAATGTGGATTACAGACTGACACAGATAGTGGTGGATCATGTCATTG CAGAAGATGGCCAGTACGATGTAATGTTTCTTGGAACAGACATTGGAACTGTCCTCAAAGTTGTCAGCATTTCAAAGGAAAAGTGGAATA TGGAAGAGGTAGTGCTGGAGGAGTTGCAGATATTCAAGCACTCATCAATCATCTTGAACATGGAATTGTCTCTGAAGCAGCAACAATTGT ACATTGGTTCCCGAGATGGATTGGTTCAGCTCTCCTTGCACAGATGCGACACTTATGGGAAAGCTTGCGCAGACTGTTGTCTTGCCAGAG ACCCCTACTGTGCCTGGGATGGAAATGCATGCTCTCGATATGCTCCTACTTCTAAAAGGAGAGCTAGACGCCAAGATGTAAAATATGGCG ACCCAATCACCCAGTGCTGGGACATCGAAGACAGCATTAGTCATGAAACTGCTGATGAAAAGGTGATTTTTGGCATTGAATTTAACTCAA CCTTTCTGGAATGTATACCTAAATCCCAACAAGCAACTATTAAATGGTATATCCAGAGGTCAGGGGATGAGCATCGAGAGGAGTTGAAGC CCGATGAAAGAATCATCAAAACGGAATATGGGCTACTGATTCGAAGTTTGCAGAAGAAGGATTCTGGGATGTATTACTGCAAAGCCCAGG AGCACACTTTCATCCACACCATAGTGAAGCTGACTTTGAATGTCATTGAGAATGAACAGATGGAAAATACCCAGAGGGCAGAGCATGAGG AGGGGAAGGTCAAGGATCTATTGGCTGAGTCACGGTTGAGATACAAAGACTACATCCAAATCCTTAGCAGCCCAAACTTCAGCCTCGACC AGTACTGCGAACAGATGTGGCACAGGGAGAAGCGGAGACAGAGAAACAAGGGGGGCCCAAAGTGGAAGCACATGCAGGAAATGAAGAAGA AACGAAATCGAAGACATCACAGAGACCTGGATGAGCTCCCTAGAGCTGTAGCCACGTAGTTTTCTACTTAATTTAAAGAAAAGAATTCCT TACCTATAAAAACATTGCCTTCTGTTTTGTATATCCCTTATAGTAATTCATAAATGCTTCCCATGGAGTTTTGCTAAGGCACAAGACAAT AATCTGAATAAGACAATATGTGATGAATATAAGAAAGGGCAAAAAATTCATTTGAACCAGTTTTCCAAGAACAAATCTTGCACAAGCAAA GTATAAGAATTATCCTAAAAATAGGGGGTTTACAGTTGTAAATGTTTTATGTTTTGAGTTTTGGAATTTATTGTCATGTAAATAGTTGAG CTAAGCAAGCCCCGAATTTGATAGTGTATAAGGTGCTTTATTCCCTCGAATGTCCATTAAGCATGGAATTTACCATGCAGTTGTGCTATG TTCTTATGAACAGATATATCATTCCTATTGAGAACCAGCTACCTTGTGGTAGGGAATAAGAGGTCAGACACAAATTAAGACAACTCCCAT TATCAACAGGAACTTTCTCAGTGAGCCATTCACTCCTGGAGAATGGTATAGGAATTTGGAGAGGTGCATTATTTCTTTCTGGCCACTGGG GTTAAATTTAGTGTACTACAACATTGATTTACTGAAGGGCACTAATGTTTCCCCCAGGATTTCTATTGACTAGTCAGGAGTAACAGGTTC ACAGAGAGAAGTTGGTGCTTAGTTATGTGTTTTTTAGAGTATATACTAAGCTCTACAGGGACAGAATGCTTAATAAATACTTTAATAAGA TATGGGAAAATATTTTAATAAAACAAGGAAAACATAATGATGTATAATGCATCCTGATGGGAAGGCATGCAGATGGGATTTGTTAGAAGA CAGAAGGAAAGACAGCCATAAATTCTGGCTTTGGGGAAAACTCATATCCCCATGAAAAGGAAGAACAATCACAAATAAAGTGAGAGTAAT GTAATGGAGCTCTTTTCACTAGGGTATAAGTAGCTGCCAATTTGTAATTCATCTGTTAAAAAAAATCTAGATTATAACAAACTGCTAGCA AAATCTGAGGAAACATAAATTCTTCTGAAGAATCATAGGAAGAGTAGACATTTTATTTATAACCAATGATATTTCAGTATATATTTTCTC TCTTTTAAAAAATATTTATCATACTCTGTATATTATTTCTTTTTACTGCCTTTATTCTCTCCTGTATATTGGATTTTGTGATTATATTTG AGTGAATAGGAGAAAACAATATATAACACACAGAGAATTAAGAAAATGACATTTCTGGGGAGTGGGGATATATATTTGTTGAATAACAGA ACGAGTGTAAAATTTTAACAACGGAAAGGGTTAAATTAACTCTTTGACATCTTCACTCAACCTTTTCTCATTGCTGAGTTAATCTGTTGT AATTGTAGTATTGTTTTTGTAATTTAACAATAAATAAGCCTGCTACATGTAAAAAGAACCAAACTCACAATATTAACATAAACATCTTTC ATATTTTGTTAGTACTTTCAAATGTTTTCAATTTGACTTTCCCTCTGAATATGCATGGTGTGTTTCCTGTCTGTTTAAGCAGAACTCACC TTTCCTTCTTGTAACACAGAACCCTTAGCCTTCTTCTGTTTTGCCTTTTCACGCCCTTTATAGTGTGAAATGAAAAATTAGTCACTTCCT CACATGGAAGGCAGCTTTTCAGAAAATAACAGACATTGCTCGTTTCTCATGCATTCTACATATCTTGAAAGAAAAGTCTGTGAGAAAACC CTGTGATTAGAGGGCAACTTAATGCAAGATCTGTGGCTCTATGTTGAGAGCATTCTCTCTCTGTTATTTTTATTTTATTTGCATTGCTTA CCTATCTCAAAGTAGTCAAACTGATATATGAGATTGAGTACTCCCTTTTGATATTATACTGATGAATATTTGTAGGTGTTTCACTATAAG GAACAGCTAAGGAATAATTTTAATAAAAGTGAACCAGAACAAATCACTCATTTAAAAAGTAATTCAGAAGAACAGTGTGGCATGATCAGA CTTCTAATTGAATAGCGTAACAACAGTGTTTGTAATTATAGATTTGCTTGGACAAAATATTCCAGGAACTCATAGCGAGCTCAAAGCAAT TAAGTGGGAACATTTTTAATTTAAAAAAAATTTCCAAATATTTGTGGGTCCGACAGTAATGATCAAAATATGAATGACTTTGGAAAATTT ACATGAAGCTCAAGTGTTAGGATTGACTTATGAAAATAAATTTTATTTCTATCCAAATTTGAATGTCCAAACCATTTTTTAGTTACTTCT TTCTAATCCTAGTTATTCAGACAAAATTTGGAAACTTATTTTATGACCACATCTAATATTCTGGCTGCTTTGGATACAATACTCTTGATT TATGATAATTAGTTAAAATATATTAAAAATATTATTAGTAAAATAAAATTTCACACAATAAAAAACAACATAGAGTACACATATTTATAT GTATTTTTAAAGATAAAGAATATCTAAAATGTGTTTTTTTCTTAGCTTTTTAGTTGTCTAGAACATTTAGAGAAAGAGTATGAATATATT AAATCCACAAACACACTATATACTTCCTCACCACTGACTATTTTATCAAATTTGCCTTAAAATAATGAAAAAGAAAAGTATAGTTAATGG TTTCAAATATGCTAAGAAATTGACTCTGCGGAGGGGATCTTAAAATGCCTGTTTACTCATGTTTTCGTATTTTTCTTGTCTCTAATACTT TTGTCTTTGTCTGCCTTGTGTGTTCTTTTCTGAATTTCATTTCAGCAATTTATGCTGCTAAATAGAATCCCGCATGTCTGCATTCATTTA CATTCAACTTATTGTAAATTTTGAGATTTTATTTAGAAATGAATTGTCTAATTAATTTATGTAGAGTCCTTTTTTCCAAAGAGCTCAAAA CACTACATCCACATTATTGACTTTTGGAAACCAACCAAATTACTTAAGAAATGGAAAAGTAGTCACAGAGAAATTTAGTAATTTGCAAAA GCCACAACAGTAGTGGAAGAATTAAAATTCATAAAGTCTCATCATTCTGTTGGCTAAAATAATGCTCTTTACAATATGCTGGCTACAAAA TGGTCTTACTCTTGAATTTTGCTTTTGGTTCATATTTTGGTTCTTCATATTCTAGTATGTTTTGTTCCTGCTGAATTTTACAGACTCAGC TAAACAATAAGTTATTAGTAGTCACTTGTTTTCATTATCATAATTGAATTTCCAAGAACAACTTGATATCATTCAGCTGTCCAAAAAATA ATAAGAGCATTCATTAAATACTGATTTTCTTAAACTTAAATGTTGTATTTCATATTTATTTATATAATACAAATGGAAATCAAAACTGAA ATAGCCTCCCTTTAGAATGTCACATTTTTCTTAGAAAACATTTTGGAATTGGTTAACCTTATTGGGAATGGATAATTTAGAAACAAACCA AAAAAAAAAAAAGATATTTGAAGTGTTTTTATAGGAGATGTATTTTTATCATAGTAAATGATCACAATTTTAAATAATTCATCTTACAAG TCAGGTAAAATAAAATCGATTCCCAGATTCCATACATTAGGAGTGCAAAGACAGGATCATACACATGACTTATACCTCTCATTTAAATAT TTTATAGTATAAAGTATTTATGGAAAGGGTTTGAGATAGATGATTTTTGGGAAAGGGCAAAATGTGTCAGATGCCCTAGTTAATCATGTA ATTTAATTCTGGTATTGTGAGTGGTTAGCAATCAATTTTGAATTTATAATTCTGCTATTTTAAAAGAAATGTAGTCTTGTAGTATGAAAT >In-frame_ENST00000394703_ENST00000284136_TCGA-FG-5963-01A_DMTF1_chr7_86800405_+_SEMA3D_chr7_84702397_length(amino acids)=763AA_start in transcript=557_stop in transcript=2848 MSMSTVEEDSDTVTVETVNSVTLTQDTEGNLILHCPQNEADEIDSEDSIEPPHKRLCLSSEDDQSIDDSTPCISVVALPLSENDQSFEVT MTATTEVADDEVTEGTVTQIQTECANFIRVLQPYNKTHIYVCGTGAFHPICGYIDLGVYKEDIIFKLDTHNLESGRLKCPFDPQQPFASV MTDEYLYSGTASDFLGKDTAFTRSLGPTHDHHYIRTDISEHYWLNGAKFIGTFFIPDTYNPDDDKIYFFFRESSQEGSTSDKTILSRVGR VCKNDVGGQRSLINKWTTFLKARLICSIPGSDGADTYFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSMADIRAVFNGPYA HKESADHRWVQYDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFIKRHSVMYKSVYPVAGGPTFKRINVDYRLTQIVVDHVIAEDGQY DVMFLGTDIGTVLKVVSISKEKWNMEEVVLEELQIFKHSSIILNMELSLKQQQLYIGSRDGLVQLSLHRCDTYGKACADCCLARDPYCAW DGNACSRYAPTSKRRARRQDVKYGDPITQCWDIEDSISHETADEKVIFGIEFNSTFLECIPKSQQATIKWYIQRSGDEHREELKPDERII KTEYGLLIRSLQKKDSGMYYCKAQEHTFIHTIVKLTLNVIENEQMENTQRAEHEEGKVKDLLAESRLRYKDYIQILSSPNFSLDQYCEQM -------------------------------------------------------------- >In-frame_ENST00000394703_ENST00000444867_TCGA-FG-5963-01A_DMTF1_chr7_86800405_+_SEMA3D_chr7_84702397_length(transcript)=1770nt_BP=890nt AAGTAAGTGCGATGGAACCTTCAGGTTCCAACCGCCGCCAGGGCCGCTCCGCCCAGTGGAGCCTGTCCGGCCCCCTTGCTGCCCGCTAGC TCCCGCCGGCTGGCGCAAGCTGTCGGCGCCGGGGCACTGCGGGCGGGGTCGGAGCCTGGCCTTCCTGACGTTGCAGCTGCCGTCCCCGCA CGTTCCGGCCAGGGCCTCCCTCTTAGGGCCGGGCGGTGCCCGTGGCTCAGGCTGCAGAGTAGAAAGCACAAAAACCAGCCTGATTGTATC TGGAAAAAACCATTATGTTACAGTTGATAGGCTCACCCCAAAATATGCTTTTGGGGACTGATTTAGCACCTGCATATTCTGCGTGAATCT CTTTAATTGGTTGCAGTTGAGCTAATGGTGGAGCCAAAATGCTATTGCCCTGTCTTCATCAACATTTAATCAAGTGTTGCGGAGATAGGA ACATGGGAGAGAAACAATCTGGGTAACATGAAAGTGATGCTGGTTGCTAAGGGAAGGCAACTTGATTCTGTGGGAAGGGCTGTAGCTGAT CCATCCGTTGTCTAGATTTGAGTATGAGCACAGTGGAAGAGGATTCTGACACAGTAACAGTAGAAACTGTGAACTCTGTGACTTTGACTC AGGACACAGAAGGGAATCTCATTCTTCACTGCCCTCAGAATGAAGCGGATGAAATAGACTCAGAAGATAGTATTGAACCTCCACATAAAA GGCTTTGTTTGTCCTCTGAGGATGATCAGAGTATTGATGATTCTACTCCTTGCATATCAGTTGTTGCACTTCCACTTTCAGAAAATGATC AGAGCTTTGAAGTGACCATGACTGCAACCACAGAAGTAGCAGATGATGAGGTTACTGAGGGGACTGTGACACAGATACAGACAGAATGTG CAAATTTCATCAGAGTACTTCAGCCCTATAACAAAACTCACATATATGTGTGTGGAACTGGAGCATTTCATCCAATATGTGGGTATATTG ATCTTGGAGTCTACAAGGAGGATATTATATTCAAACTAGACACACATAATTTGGAGTCTGGCAGACTGAAATGTCCTTTCGATCCTCAGC AGCCTTTTGCTTCAGTAATGACAGATGAGTACCTCTACTCTGGAACAGCTTCTGATTTCCTTGGCAAAGATACTGCATTCACTCGATCCC TTGGGCCTACTCATGACCACCACTACATCAGAACTGACATTTCAGAGCACTACTGGCTCAATGGAGCAAAATTTATTGGAACTTTCTTCA TACCAGACACCTACAATCCAGATGATGATAAAATATATTTCTTCTTTCGTGAATCATCTCAAGAAGGCAGTACCTCCGATAAAACCATCC TTTCTCGAGTTGGAAGAGTTTGTAAGGAGAATTTGTGCTTTGAAGATTGATCTTATTTCTGAACATAGTCAAAGTAATTTGGAGCTGTAT TTGGAGAAAGTTGCATAAATGATTTGAACAATGCAAATTTTGGTCAAGAGATATCAATGAAGAGAGACACAATAAATAAACTGACTTAAA AGATAATTTTACTGGGCAATATTGATCAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTTAAACTTAATATGTTT ATAATTATACATGGTAGAGCACATTTCCTAATGAATTATTTTTAGTAGTGTTCCTACTTTCCAGTCAAACTACTTACTCTATTTTTCCAA >In-frame_ENST00000394703_ENST00000444867_TCGA-FG-5963-01A_DMTF1_chr7_86800405_+_SEMA3D_chr7_84702397_length(amino acids)=280AA_start in transcript=557_stop in transcript=1399 MSMSTVEEDSDTVTVETVNSVTLTQDTEGNLILHCPQNEADEIDSEDSIEPPHKRLCLSSEDDQSIDDSTPCISVVALPLSENDQSFEVT MTATTEVADDEVTEGTVTQIQTECANFIRVLQPYNKTHIYVCGTGAFHPICGYIDLGVYKEDIIFKLDTHNLESGRLKCPFDPQQPFASV MTDEYLYSGTASDFLGKDTAFTRSLGPTHDHHYIRTDISEHYWLNGAKFIGTFFIPDTYNPDDDKIYFFFRESSQEGSTSDKTILSRVGR -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for DMTF1-SEMA3D |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000331242 | + | 5 | 18 | 176_760 | 109.0 | 761.0 | CCND1%2C CCND2 and CCND3 |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000394702 | + | 5 | 10 | 176_760 | 109.0 | 286.0 | CCND1%2C CCND2 and CCND3 |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000394703 | + | 7 | 20 | 176_760 | 109.0 | 761.0 | CCND1%2C CCND2 and CCND3 |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000411766 | + | 4 | 10 | 176_760 | 68.0 | 230.0 | CCND1%2C CCND2 and CCND3 |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000432937 | + | 4 | 17 | 176_760 | 21.0 | 673.0 | CCND1%2C CCND2 and CCND3 |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000331242 | + | 5 | 18 | 1_237 | 109.0 | 761.0 | CCND2 |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000394702 | + | 5 | 10 | 1_237 | 109.0 | 286.0 | CCND2 |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000394703 | + | 7 | 20 | 1_237 | 109.0 | 761.0 | CCND2 |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000411766 | + | 4 | 10 | 1_237 | 68.0 | 230.0 | CCND2 |
Hgene | DMTF1 | chr7:86800405 | chr7:84702397 | ENST00000432937 | + | 4 | 17 | 1_237 | 21.0 | 673.0 | CCND2 |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for DMTF1-SEMA3D |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for DMTF1-SEMA3D |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | SEMA3D | C0019569 | Hirschsprung Disease | 1 | ORPHANET |
Tgene | SEMA3D | C0036341 | Schizophrenia | 1 | PSYGENET |
Tgene | SEMA3D | C3661523 | Congenital Intestinal Aganglionosis | 1 | ORPHANET |