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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:DNM3-TPH2 (FusionGDB2 ID:23657) |
Fusion Gene Summary for DNM3-TPH2 |
Fusion gene summary |
Fusion gene information | Fusion gene name: DNM3-TPH2 | Fusion gene ID: 23657 | Hgene | Tgene | Gene symbol | DNM3 | TPH2 | Gene ID | 26052 | 121278 |
Gene name | dynamin 3 | tryptophan hydroxylase 2 | |
Synonyms | Dyna III | ADHD7|NTPH | |
Cytomap | 1q24.3 | 12q21.1 | |
Type of gene | protein-coding | protein-coding | |
Description | dynamin-3T-dynamindynamin family memberdynamin, testicular | tryptophan 5-hydroxylase 2neuronal tryptophan hydroxylasetryptophan 5-monooxygenase 2 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | Q9UQ16 | . | |
Ensembl transtripts involved in fusion gene | ENST00000358155, ENST00000367733, ENST00000355305, ENST00000367731, ENST00000520906, | ENST00000333850, ENST00000546576, | |
Fusion gene scores | * DoF score | 9 X 7 X 5=315 | 8 X 6 X 4=192 |
# samples | 9 | 7 | |
** MAII score | log2(9/315*10)=-1.8073549220576 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(7/192*10)=-1.45567948377619 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: DNM3 [Title/Abstract] AND TPH2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | DNM3(172222822)-TPH2(72388219), # samples:3 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene breakpoints across DNM3 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across TPH2 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | SARC | TCGA-DX-A3U6-01A | DNM3 | chr1 | 172222822 | + | TPH2 | chr12 | 72388219 | + |
ChimerDB4 | SARC | TCGA-DX-A3U6-01A | DNM3 | chr1 | 172222822 | + | TPH2 | chr12 | 72388219 | + |
ChimerDB4 | SARC | TCGA-DX-A3U6-01A | DNM3 | chr1 | 172222822 | - | TPH2 | chr12 | 72388219 | + |
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Fusion Gene ORF analysis for DNM3-TPH2 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000358155 | ENST00000333850 | DNM3 | chr1 | 172222822 | + | TPH2 | chr12 | 72388219 | + |
5CDS-intron | ENST00000358155 | ENST00000546576 | DNM3 | chr1 | 172222822 | + | TPH2 | chr12 | 72388219 | + |
intron-3CDS | ENST00000367733 | ENST00000333850 | DNM3 | chr1 | 172222822 | + | TPH2 | chr12 | 72388219 | + |
intron-intron | ENST00000367733 | ENST00000546576 | DNM3 | chr1 | 172222822 | + | TPH2 | chr12 | 72388219 | + |
In-frame | ENST00000355305 | ENST00000333850 | DNM3 | chr1 | 172222822 | + | TPH2 | chr12 | 72388219 | + |
5CDS-intron | ENST00000355305 | ENST00000546576 | DNM3 | chr1 | 172222822 | + | TPH2 | chr12 | 72388219 | + |
In-frame | ENST00000367731 | ENST00000333850 | DNM3 | chr1 | 172222822 | + | TPH2 | chr12 | 72388219 | + |
5CDS-intron | ENST00000367731 | ENST00000546576 | DNM3 | chr1 | 172222822 | + | TPH2 | chr12 | 72388219 | + |
In-frame | ENST00000520906 | ENST00000333850 | DNM3 | chr1 | 172222822 | + | TPH2 | chr12 | 72388219 | + |
5CDS-intron | ENST00000520906 | ENST00000546576 | DNM3 | chr1 | 172222822 | + | TPH2 | chr12 | 72388219 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000358155 | DNM3 | chr1 | 172222822 | + | ENST00000333850 | TPH2 | chr12 | 72388219 | + | 3223 | 1945 | 152 | 2476 | 774 |
ENST00000355305 | DNM3 | chr1 | 172222822 | + | ENST00000333850 | TPH2 | chr12 | 72388219 | + | 3234 | 1956 | 133 | 2487 | 784 |
ENST00000367731 | DNM3 | chr1 | 172222822 | + | ENST00000333850 | TPH2 | chr12 | 72388219 | + | 3204 | 1926 | 133 | 2457 | 774 |
ENST00000520906 | DNM3 | chr1 | 172222822 | + | ENST00000333850 | TPH2 | chr12 | 72388219 | + | 3175 | 1897 | 104 | 2428 | 774 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000358155 | ENST00000333850 | DNM3 | chr1 | 172222822 | + | TPH2 | chr12 | 72388219 | + | 0.002167171 | 0.99783283 |
ENST00000355305 | ENST00000333850 | DNM3 | chr1 | 172222822 | + | TPH2 | chr12 | 72388219 | + | 0.002137469 | 0.9978625 |
ENST00000367731 | ENST00000333850 | DNM3 | chr1 | 172222822 | + | TPH2 | chr12 | 72388219 | + | 0.002203357 | 0.99779665 |
ENST00000520906 | ENST00000333850 | DNM3 | chr1 | 172222822 | + | TPH2 | chr12 | 72388219 | + | 0.002136385 | 0.9978636 |
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Fusion Genomic Features for DNM3-TPH2 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
DNM3 | chr1 | 172222822 | + | TPH2 | chr12 | 72388218 | + | 0.000203318 | 0.9997967 |
DNM3 | chr1 | 172222822 | + | TPH2 | chr12 | 72388218 | + | 0.000203318 | 0.9997967 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for DNM3-TPH2 |
Go to FGviewer for the breakpoints of chr1:172222822-chr12:72388219 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
DNM3 | . |
FUNCTION: Microtubule-associated force-producing protein involved in producing microtubule bundles and able to bind and hydrolyze GTP. Most probably involved in vesicular trafficking processes, in particular endocytosis (By similarity). {ECO:0000250}. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000355305 | + | 16 | 21 | 28_294 | 599.6666666666666 | 870.0 | Domain | Dynamin-type G |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000358155 | + | 15 | 21 | 28_294 | 589.6666666666666 | 864.0 | Domain | Dynamin-type G |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000367731 | + | 15 | 20 | 28_294 | 589.6666666666666 | 860.0 | Domain | Dynamin-type G |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000355305 | + | 16 | 21 | 205_211 | 599.6666666666666 | 870.0 | Nucleotide binding | GTP |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000355305 | + | 16 | 21 | 236_239 | 599.6666666666666 | 870.0 | Nucleotide binding | GTP |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000355305 | + | 16 | 21 | 38_46 | 599.6666666666666 | 870.0 | Nucleotide binding | GTP |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000358155 | + | 15 | 21 | 205_211 | 589.6666666666666 | 864.0 | Nucleotide binding | GTP |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000358155 | + | 15 | 21 | 236_239 | 589.6666666666666 | 864.0 | Nucleotide binding | GTP |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000358155 | + | 15 | 21 | 38_46 | 589.6666666666666 | 864.0 | Nucleotide binding | GTP |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000367731 | + | 15 | 20 | 205_211 | 589.6666666666666 | 860.0 | Nucleotide binding | GTP |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000367731 | + | 15 | 20 | 236_239 | 589.6666666666666 | 860.0 | Nucleotide binding | GTP |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000367731 | + | 15 | 20 | 38_46 | 589.6666666666666 | 860.0 | Nucleotide binding | GTP |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000355305 | + | 16 | 21 | 136_139 | 599.6666666666666 | 870.0 | Region | G3 motif |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000355305 | + | 16 | 21 | 205_208 | 599.6666666666666 | 870.0 | Region | G4 motif |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000355305 | + | 16 | 21 | 235_238 | 599.6666666666666 | 870.0 | Region | G5 motif |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000355305 | + | 16 | 21 | 38_45 | 599.6666666666666 | 870.0 | Region | G1 motif |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000355305 | + | 16 | 21 | 64_66 | 599.6666666666666 | 870.0 | Region | G2 motif |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000358155 | + | 15 | 21 | 136_139 | 589.6666666666666 | 864.0 | Region | G3 motif |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000358155 | + | 15 | 21 | 205_208 | 589.6666666666666 | 864.0 | Region | G4 motif |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000358155 | + | 15 | 21 | 235_238 | 589.6666666666666 | 864.0 | Region | G5 motif |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000358155 | + | 15 | 21 | 38_45 | 589.6666666666666 | 864.0 | Region | G1 motif |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000358155 | + | 15 | 21 | 64_66 | 589.6666666666666 | 864.0 | Region | G2 motif |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000367731 | + | 15 | 20 | 136_139 | 589.6666666666666 | 860.0 | Region | G3 motif |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000367731 | + | 15 | 20 | 205_208 | 589.6666666666666 | 860.0 | Region | G4 motif |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000367731 | + | 15 | 20 | 235_238 | 589.6666666666666 | 860.0 | Region | G5 motif |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000367731 | + | 15 | 20 | 38_45 | 589.6666666666666 | 860.0 | Region | G1 motif |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000367731 | + | 15 | 20 | 64_66 | 589.6666666666666 | 860.0 | Region | G2 motif |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000355305 | + | 16 | 21 | 515_621 | 599.6666666666666 | 870.0 | Domain | PH |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000355305 | + | 16 | 21 | 659_750 | 599.6666666666666 | 870.0 | Domain | GED |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000358155 | + | 15 | 21 | 515_621 | 589.6666666666666 | 864.0 | Domain | PH |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000358155 | + | 15 | 21 | 659_750 | 589.6666666666666 | 864.0 | Domain | GED |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000367731 | + | 15 | 20 | 515_621 | 589.6666666666666 | 860.0 | Domain | PH |
Hgene | DNM3 | chr1:172222822 | chr12:72388219 | ENST00000367731 | + | 15 | 20 | 659_750 | 589.6666666666666 | 860.0 | Domain | GED |
Tgene | TPH2 | chr1:172222822 | chr12:72388219 | ENST00000333850 | 6 | 11 | 65_140 | 313.6666666666667 | 491.0 | Domain | ACT |
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Fusion Gene Sequence for DNM3-TPH2 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000358155_ENST00000333850_TCGA-DX-A3U6-01A_DNM3_chr1_172222822_+_TPH2_chr12_72388219_length(transcript)=3223nt_BP=1945nt GCGGGTCGTTAGCTGTCAGAGCCAAGCGGCGGGCTGGCGGCGGGCTCCGACGTCTGCGCCAGGACCTGGCTGGCTGAGCCCGGCGCAGCA GCAGCAGCCAGGGCAGCGCGGCCCCTACTCCCTGTCAGGTCGTAGAGGCGAGCAGGGACCAGCTGGTCGCCGGCCCCTCGGGCAAGATGG GGAACCGGGAGATGGAGGAGCTGATCCCGCTGGTGAACCGTCTGCAGGACGCGTTTTCGGCGCTGGGACAGAGCTGCCTGCTGGAGCTGC CGCAGATCGCCGTGGTGGGCGGCCAGAGCGCCGGCAAGAGCTCGGTGCTCGAGAACTTCGTGGGCAGGGACTTTCTCCCTCGAGGGTCGG GCATTGTAACAAGACGACCTCTTGTGCTGCAGCTTGTTACTTCTAAAGCAGAATATGCCGAGTTTCTACATTGCAAAGGAAAGAAATTTA CAGATTTTGATGAAGTTCGCCTTGAGATTGAAGCAGAAACAGATCGCGTGACTGGAATGAATAAAGGCATTTCCTCCATACCCATTAATT TACGAGTCTATTCCCCACACGTGTTAAATCTAACCCTTATTGATCTACCTGGAATAACTAAAGTGCCTGTGGGAGATCAGCCACCAGATA TCGAGTATCAGATCAGAGAAATGATTATGCAGTTCATCACGAGGGAGAACTGTCTGATTTTAGCTGTTACTCCAGCCAACACTGATCTTG CAAACTCAGATGCGCTGAAGCTAGCTAAAGAAGTTGATCCTCAAGGTCTGAGAACCATTGGAGTTATCACCAAACTGGACCTTATGGATG AAGGAACGGATGCCAGGGATGTTCTAGAGAACAAACTGTTGCCTCTTCGCAGGGGTTACGTGGGGGTGGTAAACAGAAGCCAGAAGGACA TAGATGGGAAGAAGGACATAAAGGCAGCCATGCTGGCAGAGAGGAAGTTTTTCCTTTCCCACCCGGCTTACAGACATATCGCTGACCGAA TGGGAACCCCACACCTGCAGAAGGTCCTTAATCAGCAACTTACCAACCACATTCGGGATACCCTACCAAACTTCAGGAACAAACTACAGG GACAGTTGCTCTCCATAGAACATGAAGTAGAAGCCTACAAAAATTTCAAACCAGAAGACCCAACAAGGAAGACCAAAGCATTGCTGCAGA TGGTTCAGCAATTTGCTGTGGACTTTGAGAAGAGAATTGAAGGGTCAGGGGATCAAGTAGATACCCTGGAACTCTCAGGTGGTGCTAAAA TCAATCGTATTTTTCATGAACGCTTTCCTTTTGAGATAGTAAAGATGGAGTTCAATGAGAAAGAATTGCGAAGAGAAATAAGCTATGCAA TCAAAAACATACATGGTATCAGGACAGGGTTGTTTACTCCAGACATGGCATTTGAAGCGATAGTCAAGAAACAGATTGTAAAGTTGAAAG GGCCTTCCTTGAAGAGTGTGGATCTGGTAATACAAGAATTAATCAACACTGTGAAGAAGTGTACCAAAAAACTGGCAAACTTCCCCAGAC TCTGCGAGGAAACGGAAAGGATTGTTGCTAACCACATTCGTGAGCGAGAAGGGAAGACAAAGGACCAGGTATTGCTATTGATTGACATTC AAGTCTCTTACATCAACACCAACCATGAAGACTTCATTGGCTTCGCAAATGCTCAGCAGAGGAGCAGTCAGGTTCACAAGAAAACCACAG TTGGAAATCAGGTGATTCGCAAGGGGTGGCTCACCATCAGCAACATTGGCATCATGAAAGGCGGCTCGAAGGGATACTGGTTCGTCCTTA CTGCGGAAAGCTTGTCCTGGTATAAAGATGATGAGGAAAAAGAAAAGAAGTACATGCTTCCCTTGGACAACCTGAAAGTTCGGGATGTGG AAAAGAGCTTTATGTCTAGCAAGCACATCTTTGCACTCTTTAATACAGAGCAAAGAGACACATGCCATGAACTCTTGGGACATGTTCCAC TACTTGCGGATCCTAAGTTTGCTCAGTTTTCACAAGAAATAGGTCTGGCGTCTCTGGGAGCATCAGATGAAGATGTTCAGAAACTAGCCA CGTGCTATTTCTTCACAATCGAGTTTGGCCTTTGCAAGCAAGAAGGGCAACTGCGGGCATATGGAGCAGGACTCCTTTCCTCCATTGGAG AATTAAAGCACGCCCTTTCTGACAAGGCATGTGTGAAAGCCTTTGACCCAAAGACAACTTGCTTACAGGAATGCCTTATCACCACCTTCC AGGAAGCCTACTTTGTTTCAGAAAGTTTTGAAGAAGCCAAAGAAAAGATGAGGGACTTTGCAAAGTCAATTACCCGTCCCTTCTCAGTAT ACTTCAATCCCTACACACAGAGTATTGAAATTCTGAAAGACACCAGAAGTATTGAAAATGTGGTGCAGGACCTTCGCAGCGACTTGAATA CAGTGTGTGATGCTTTAAACAAAATGAACCAATATCTGGGGATTTGATGCCTGGAACTATGTTGTTGCCAGCATGATCTTTTTGGGGCTT AGCAGCAGTTCAGTCAATGTCATATAACGCAAATAACCTTCTGTGTCATGGCTTGGCTAATAAGCATGCAATTCCATATATCTATACCAT CTTGTAACTCACTGTGTTAGTATATAAAGCACCATAAGAAATCCAATGGCAGATAACCACTCATTGTATGAAATAACGTATTATGTTTAA ACATCTTAAAAAGATTTGACATTCCTGCTTAGTGTCCTTAACCAAACTGCATCTAGTTAAAATTTGTAACAAATAGCCCTCTTATGAGTC TCATTTATGCCCTTTTCTTTTTCAGATCTAAGCCTTTCCTCTGTGTTCATTAGATAAAATGAAAAAAAGCAGTGAAGCTGTTTCCATTTT CAATAGTATCAGTGTTTTCACGCATTATTTGAGATAAACCCAGAATTGTAGGAAACTTCCCATCACAATAACAAAGGTTCAATATTCTAT TTCAAAAATTGTTGAGGTAACACAGCAGTTGGAATGATTTTTAGGTTGAGTATTTACACAATGCAAGAAAACACCTTTTTACAAATGGAA TTATGTAGGTTGCGTTGACCTTGTAGAACCTGAGTTATGACAAGCTTCCTGAAGTATTTTGGAAGATAGTACTTCCGGAAAGGACATTAG >In-frame_ENST00000358155_ENST00000333850_TCGA-DX-A3U6-01A_DNM3_chr1_172222822_+_TPH2_chr12_72388219_length(amino acids)=774AA_start in transcript=152_stop in transcript=2476 MVAGPSGKMGNREMEELIPLVNRLQDAFSALGQSCLLELPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVTSKAEYAE FLHCKGKKFTDFDEVRLEIEAETDRVTGMNKGISSIPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIREMIMQFITRENCLIL AVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYVGVVNRSQKDIDGKKDIKAAMLAERKFFLSH PAYRHIADRMGTPHLQKVLNQQLTNHIRDTLPNFRNKLQGQLLSIEHEVEAYKNFKPEDPTRKTKALLQMVQQFAVDFEKRIEGSGDQVD TLELSGGAKINRIFHERFPFEIVKMEFNEKELRREISYAIKNIHGIRTGLFTPDMAFEAIVKKQIVKLKGPSLKSVDLVIQELINTVKKC TKKLANFPRLCEETERIVANHIREREGKTKDQVLLLIDIQVSYINTNHEDFIGFANAQQRSSQVHKKTTVGNQVIRKGWLTISNIGIMKG GSKGYWFVLTAESLSWYKDDEEKEKKYMLPLDNLKVRDVEKSFMSSKHIFALFNTEQRDTCHELLGHVPLLADPKFAQFSQEIGLASLGA SDEDVQKLATCYFFTIEFGLCKQEGQLRAYGAGLLSSIGELKHALSDKACVKAFDPKTTCLQECLITTFQEAYFVSESFEEAKEKMRDFA -------------------------------------------------------------- >In-frame_ENST00000355305_ENST00000333850_TCGA-DX-A3U6-01A_DNM3_chr1_172222822_+_TPH2_chr12_72388219_length(transcript)=3234nt_BP=1956nt AGCCAAGCGGCGGGCTGGCGGCGGGCTCCGACGTCTGCGCCAGGACCTGGCTGGCTGAGCCCGGCGCAGCAGCAGCAGCCAGGGCAGCGC GGCCCCTACTCCCTGTCAGGTCGTAGAGGCGAGCAGGGACCAGCTGGTCGCCGGCCCCTCGGGCAAGATGGGGAACCGGGAGATGGAGGA GCTGATCCCGCTGGTGAACCGTCTGCAGGACGCGTTTTCGGCGCTGGGACAGAGCTGCCTGCTGGAGCTGCCGCAGATCGCCGTGGTGGG CGGCCAGAGCGCCGGCAAGAGCTCGGTGCTCGAGAACTTCGTGGGCAGGGACTTTCTCCCTCGAGGGTCGGGCATTGTAACAAGACGACC TCTTGTGCTGCAGCTTGTTACTTCTAAAGCAGAATATGCCGAGTTTCTACATTGCAAAGGAAAGAAATTTACAGATTTTGATGAAGTTCG CCTTGAGATTGAAGCAGAAACAGATCGCGTGACTGGAATGAATAAAGGCATTTCCTCCATACCCATTAATTTACGAGTCTATTCCCCACA CGTGTTAAATCTAACCCTTATTGATCTACCTGGAATAACTAAAGTGCCTGTGGGAGATCAGCCACCAGATATCGAGTATCAGATCAGAGA AATGATTATGCAGTTCATCACGAGGGAGAACTGTCTGATTTTAGCTGTTACTCCAGCCAACACTGATCTTGCAAACTCAGATGCGCTGAA GCTAGCTAAAGAAGTTGATCCTCAAGGTCTGAGAACCATTGGAGTTATCACCAAACTGGACCTTATGGATGAAGGAACGGATGCCAGGGA TGTTCTAGAGAACAAACTGTTGCCTCTTCGCAGGGGTTACGTGGGGGTGGTAAACAGAAGCCAGAAGGACATAGATGGGAAGAAGGACAT AAAGGCAGCCATGCTGGCAGAGAGGAAGTTTTTCCTTTCCCACCCGGCTTACAGACATATCGCTGACCGAATGGGAACCCCACACCTGCA GAAGGTCCTTAATCAGCAACTTACCAACCACATTCGGGATACCCTACCAAACTTCAGGAACAAACTACAGGGACAGTTGCTCTCCATAGA ACATGAAGTAGAAGCCTACAAAAATTTCAAACCAGAAGACCCAACAAGGAAGACCAAAGCATTGCTGCAGATGGTTCAGCAATTTGCTGT GGACTTTGAGAAGAGAATTGAAGGGTCAGGGGATCAAGTAGATACCCTGGAACTCTCAGGTGGTGCTAAAATCAATCGTATTTTTCATGA ACGCTTTCCTTTTGAGATAGTAAAGATGGAGTTCAATGAGAAAGAATTGCGAAGAGAAATAAGCTATGCAATCAAAAACATACATGGTAT CAGGACAGGGTTGTTTACTCCAGACATGGCATTTGAAGCGATAGTCAAGAAACAGATTGTAAAGTTGAAAGGGCCTTCCTTGAAGAGTGT GGATCTGGTAATACAAGAATTAATCAACACTGTGAAGAAGTGTACCAAAAAACTGGCAAACTTCCCCAGACTCTGCGAGGAAACGGAAAG GATTGTTGCTAACCACATTCGTGAGCGAGAAGGGAAGACAAAGGACCAGGTATTGCTATTGATTGACATTCAAGTCTCTTACATCAACAC CAACCATGAAGACTTCATTGGCTTCGCAAATGCTCAGCAGAGGAGCAGTCAGGTTCACAAGAAAACCACAGTTGGAAATCAGGGAACCAA TCTTCCGCCTTCAAGGCAAATTGTGATTCGCAAGGGGTGGCTCACCATCAGCAACATTGGCATCATGAAAGGCGGCTCGAAGGGATACTG GTTCGTCCTTACTGCGGAAAGCTTGTCCTGGTATAAAGATGATGAGGAAAAAGAAAAGAAGTACATGCTTCCCTTGGACAACCTGAAAGT TCGGGATGTGGAAAAGAGCTTTATGTCTAGCAAGCACATCTTTGCACTCTTTAATACAGAGCAAAGAGACACATGCCATGAACTCTTGGG ACATGTTCCACTACTTGCGGATCCTAAGTTTGCTCAGTTTTCACAAGAAATAGGTCTGGCGTCTCTGGGAGCATCAGATGAAGATGTTCA GAAACTAGCCACGTGCTATTTCTTCACAATCGAGTTTGGCCTTTGCAAGCAAGAAGGGCAACTGCGGGCATATGGAGCAGGACTCCTTTC CTCCATTGGAGAATTAAAGCACGCCCTTTCTGACAAGGCATGTGTGAAAGCCTTTGACCCAAAGACAACTTGCTTACAGGAATGCCTTAT CACCACCTTCCAGGAAGCCTACTTTGTTTCAGAAAGTTTTGAAGAAGCCAAAGAAAAGATGAGGGACTTTGCAAAGTCAATTACCCGTCC CTTCTCAGTATACTTCAATCCCTACACACAGAGTATTGAAATTCTGAAAGACACCAGAAGTATTGAAAATGTGGTGCAGGACCTTCGCAG CGACTTGAATACAGTGTGTGATGCTTTAAACAAAATGAACCAATATCTGGGGATTTGATGCCTGGAACTATGTTGTTGCCAGCATGATCT TTTTGGGGCTTAGCAGCAGTTCAGTCAATGTCATATAACGCAAATAACCTTCTGTGTCATGGCTTGGCTAATAAGCATGCAATTCCATAT ATCTATACCATCTTGTAACTCACTGTGTTAGTATATAAAGCACCATAAGAAATCCAATGGCAGATAACCACTCATTGTATGAAATAACGT ATTATGTTTAAACATCTTAAAAAGATTTGACATTCCTGCTTAGTGTCCTTAACCAAACTGCATCTAGTTAAAATTTGTAACAAATAGCCC TCTTATGAGTCTCATTTATGCCCTTTTCTTTTTCAGATCTAAGCCTTTCCTCTGTGTTCATTAGATAAAATGAAAAAAAGCAGTGAAGCT GTTTCCATTTTCAATAGTATCAGTGTTTTCACGCATTATTTGAGATAAACCCAGAATTGTAGGAAACTTCCCATCACAATAACAAAGGTT CAATATTCTATTTCAAAAATTGTTGAGGTAACACAGCAGTTGGAATGATTTTTAGGTTGAGTATTTACACAATGCAAGAAAACACCTTTT TACAAATGGAATTATGTAGGTTGCGTTGACCTTGTAGAACCTGAGTTATGACAAGCTTCCTGAAGTATTTTGGAAGATAGTACTTCCGGA >In-frame_ENST00000355305_ENST00000333850_TCGA-DX-A3U6-01A_DNM3_chr1_172222822_+_TPH2_chr12_72388219_length(amino acids)=784AA_start in transcript=133_stop in transcript=2487 MVAGPSGKMGNREMEELIPLVNRLQDAFSALGQSCLLELPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVTSKAEYAE FLHCKGKKFTDFDEVRLEIEAETDRVTGMNKGISSIPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIREMIMQFITRENCLIL AVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYVGVVNRSQKDIDGKKDIKAAMLAERKFFLSH PAYRHIADRMGTPHLQKVLNQQLTNHIRDTLPNFRNKLQGQLLSIEHEVEAYKNFKPEDPTRKTKALLQMVQQFAVDFEKRIEGSGDQVD TLELSGGAKINRIFHERFPFEIVKMEFNEKELRREISYAIKNIHGIRTGLFTPDMAFEAIVKKQIVKLKGPSLKSVDLVIQELINTVKKC TKKLANFPRLCEETERIVANHIREREGKTKDQVLLLIDIQVSYINTNHEDFIGFANAQQRSSQVHKKTTVGNQGTNLPPSRQIVIRKGWL TISNIGIMKGGSKGYWFVLTAESLSWYKDDEEKEKKYMLPLDNLKVRDVEKSFMSSKHIFALFNTEQRDTCHELLGHVPLLADPKFAQFS QEIGLASLGASDEDVQKLATCYFFTIEFGLCKQEGQLRAYGAGLLSSIGELKHALSDKACVKAFDPKTTCLQECLITTFQEAYFVSESFE -------------------------------------------------------------- >In-frame_ENST00000367731_ENST00000333850_TCGA-DX-A3U6-01A_DNM3_chr1_172222822_+_TPH2_chr12_72388219_length(transcript)=3204nt_BP=1926nt AGCCAAGCGGCGGGCTGGCGGCGGGCTCCGACGTCTGCGCCAGGACCTGGCTGGCTGAGCCCGGCGCAGCAGCAGCAGCCAGGGCAGCGC GGCCCCTACTCCCTGTCAGGTCGTAGAGGCGAGCAGGGACCAGCTGGTCGCCGGCCCCTCGGGCAAGATGGGGAACCGGGAGATGGAGGA GCTGATCCCGCTGGTGAACCGTCTGCAGGACGCGTTTTCGGCGCTGGGACAGAGCTGCCTGCTGGAGCTGCCGCAGATCGCCGTGGTGGG CGGCCAGAGCGCCGGCAAGAGCTCGGTGCTCGAGAACTTCGTGGGCAGGGACTTTCTCCCTCGAGGGTCGGGCATTGTAACAAGACGACC TCTTGTGCTGCAGCTTGTTACTTCTAAAGCAGAATATGCCGAGTTTCTACATTGCAAAGGAAAGAAATTTACAGATTTTGATGAAGTTCG CCTTGAGATTGAAGCAGAAACAGATCGCGTGACTGGAATGAATAAAGGCATTTCCTCCATACCCATTAATTTACGAGTCTATTCCCCACA CGTGTTAAATCTAACCCTTATTGATCTACCTGGAATAACTAAAGTGCCTGTGGGAGATCAGCCACCAGATATCGAGTATCAGATCAGAGA AATGATTATGCAGTTCATCACGAGGGAGAACTGTCTGATTTTAGCTGTTACTCCAGCCAACACTGATCTTGCAAACTCAGATGCGCTGAA GCTAGCTAAAGAAGTTGATCCTCAAGGTCTGAGAACCATTGGAGTTATCACCAAACTGGACCTTATGGATGAAGGAACGGATGCCAGGGA TGTTCTAGAGAACAAACTGTTGCCTCTTCGCAGGGGTTACGTGGGGGTGGTAAACAGAAGCCAGAAGGACATAGATGGGAAGAAGGACAT AAAGGCAGCCATGCTGGCAGAGAGGAAGTTTTTCCTTTCCCACCCGGCTTACAGACATATCGCTGACCGAATGGGAACCCCACACCTGCA GAAGGTCCTTAATCAGCAACTTACCAACCACATTCGGGATACCCTACCAAACTTCAGGAACAAACTACAGGGACAGTTGCTCTCCATAGA ACATGAAGTAGAAGCCTACAAAAATTTCAAACCAGAAGACCCAACAAGGAAGACCAAAGCATTGCTGCAGATGGTTCAGCAATTTGCTGT GGACTTTGAGAAGAGAATTGAAGGGTCAGGGGATCAAGTAGATACCCTGGAACTCTCAGGTGGTGCTAAAATCAATCGTATTTTTCATGA ACGCTTTCCTTTTGAGATAGTAAAGATGGAGTTCAATGAGAAAGAATTGCGAAGAGAAATAAGCTATGCAATCAAAAACATACATGGTAT CAGGACAGGGTTGTTTACTCCAGACATGGCATTTGAAGCGATAGTCAAGAAACAGATTGTAAAGTTGAAAGGGCCTTCCTTGAAGAGTGT GGATCTGGTAATACAAGAATTAATCAACACTGTGAAGAAGTGTACCAAAAAACTGGCAAACTTCCCCAGACTCTGCGAGGAAACGGAAAG GATTGTTGCTAACCACATTCGTGAGCGAGAAGGGAAGACAAAGGACCAGGTATTGCTATTGATTGACATTCAAGTCTCTTACATCAACAC CAACCATGAAGACTTCATTGGCTTCGCAAATGCTCAGCAGAGGAGCAGTCAGGTTCACAAGAAAACCACAGTTGGAAATCAGGTGATTCG CAAGGGGTGGCTCACCATCAGCAACATTGGCATCATGAAAGGCGGCTCGAAGGGATACTGGTTCGTCCTTACTGCGGAAAGCTTGTCCTG GTATAAAGATGATGAGGAAAAAGAAAAGAAGTACATGCTTCCCTTGGACAACCTGAAAGTTCGGGATGTGGAAAAGAGCTTTATGTCTAG CAAGCACATCTTTGCACTCTTTAATACAGAGCAAAGAGACACATGCCATGAACTCTTGGGACATGTTCCACTACTTGCGGATCCTAAGTT TGCTCAGTTTTCACAAGAAATAGGTCTGGCGTCTCTGGGAGCATCAGATGAAGATGTTCAGAAACTAGCCACGTGCTATTTCTTCACAAT CGAGTTTGGCCTTTGCAAGCAAGAAGGGCAACTGCGGGCATATGGAGCAGGACTCCTTTCCTCCATTGGAGAATTAAAGCACGCCCTTTC TGACAAGGCATGTGTGAAAGCCTTTGACCCAAAGACAACTTGCTTACAGGAATGCCTTATCACCACCTTCCAGGAAGCCTACTTTGTTTC AGAAAGTTTTGAAGAAGCCAAAGAAAAGATGAGGGACTTTGCAAAGTCAATTACCCGTCCCTTCTCAGTATACTTCAATCCCTACACACA GAGTATTGAAATTCTGAAAGACACCAGAAGTATTGAAAATGTGGTGCAGGACCTTCGCAGCGACTTGAATACAGTGTGTGATGCTTTAAA CAAAATGAACCAATATCTGGGGATTTGATGCCTGGAACTATGTTGTTGCCAGCATGATCTTTTTGGGGCTTAGCAGCAGTTCAGTCAATG TCATATAACGCAAATAACCTTCTGTGTCATGGCTTGGCTAATAAGCATGCAATTCCATATATCTATACCATCTTGTAACTCACTGTGTTA GTATATAAAGCACCATAAGAAATCCAATGGCAGATAACCACTCATTGTATGAAATAACGTATTATGTTTAAACATCTTAAAAAGATTTGA CATTCCTGCTTAGTGTCCTTAACCAAACTGCATCTAGTTAAAATTTGTAACAAATAGCCCTCTTATGAGTCTCATTTATGCCCTTTTCTT TTTCAGATCTAAGCCTTTCCTCTGTGTTCATTAGATAAAATGAAAAAAAGCAGTGAAGCTGTTTCCATTTTCAATAGTATCAGTGTTTTC ACGCATTATTTGAGATAAACCCAGAATTGTAGGAAACTTCCCATCACAATAACAAAGGTTCAATATTCTATTTCAAAAATTGTTGAGGTA ACACAGCAGTTGGAATGATTTTTAGGTTGAGTATTTACACAATGCAAGAAAACACCTTTTTACAAATGGAATTATGTAGGTTGCGTTGAC CTTGTAGAACCTGAGTTATGACAAGCTTCCTGAAGTATTTTGGAAGATAGTACTTCCGGAAAGGACATTAGGAAAGACTAAACAGTGGAC >In-frame_ENST00000367731_ENST00000333850_TCGA-DX-A3U6-01A_DNM3_chr1_172222822_+_TPH2_chr12_72388219_length(amino acids)=774AA_start in transcript=133_stop in transcript=2457 MVAGPSGKMGNREMEELIPLVNRLQDAFSALGQSCLLELPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVTSKAEYAE FLHCKGKKFTDFDEVRLEIEAETDRVTGMNKGISSIPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIREMIMQFITRENCLIL AVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYVGVVNRSQKDIDGKKDIKAAMLAERKFFLSH PAYRHIADRMGTPHLQKVLNQQLTNHIRDTLPNFRNKLQGQLLSIEHEVEAYKNFKPEDPTRKTKALLQMVQQFAVDFEKRIEGSGDQVD TLELSGGAKINRIFHERFPFEIVKMEFNEKELRREISYAIKNIHGIRTGLFTPDMAFEAIVKKQIVKLKGPSLKSVDLVIQELINTVKKC TKKLANFPRLCEETERIVANHIREREGKTKDQVLLLIDIQVSYINTNHEDFIGFANAQQRSSQVHKKTTVGNQVIRKGWLTISNIGIMKG GSKGYWFVLTAESLSWYKDDEEKEKKYMLPLDNLKVRDVEKSFMSSKHIFALFNTEQRDTCHELLGHVPLLADPKFAQFSQEIGLASLGA SDEDVQKLATCYFFTIEFGLCKQEGQLRAYGAGLLSSIGELKHALSDKACVKAFDPKTTCLQECLITTFQEAYFVSESFEEAKEKMRDFA -------------------------------------------------------------- >In-frame_ENST00000520906_ENST00000333850_TCGA-DX-A3U6-01A_DNM3_chr1_172222822_+_TPH2_chr12_72388219_length(transcript)=3175nt_BP=1897nt GACGTCTGCGCCAGGACCTGGCTGGCTGAGCCCGGCGCAGCAGCAGCAGCCAGGGCAGCGCGGCCCCTACTCCCTGTCAGGTCGTAGAGG CGAGCAGGGACCAGCTGGTCGCCGGCCCCTCGGGCAAGATGGGGAACCGGGAGATGGAGGAGCTGATCCCGCTGGTGAACCGTCTGCAGG ACGCGTTTTCGGCGCTGGGACAGAGCTGCCTGCTGGAGCTGCCGCAGATCGCCGTGGTGGGCGGCCAGAGCGCCGGCAAGAGCTCGGTGC TCGAGAACTTCGTGGGCAGGGACTTTCTCCCTCGAGGGTCGGGCATTGTAACAAGACGACCTCTTGTGCTGCAGCTTGTTACTTCTAAAG CAGAATATGCCGAGTTTCTACATTGCAAAGGAAAGAAATTTACAGATTTTGATGAAGTTCGCCTTGAGATTGAAGCAGAAACAGATCGCG TGACTGGAATGAATAAAGGCATTTCCTCCATACCCATTAATTTACGAGTCTATTCCCCACACGTGTTAAATCTAACCCTTATTGATCTAC CTGGAATAACTAAAGTGCCTGTGGGAGATCAGCCACCAGATATCGAGTATCAGATCAGAGAAATGATTATGCAGTTCATCACGAGGGAGA ACTGTCTGATTTTAGCTGTTACTCCAGCCAACACTGATCTTGCAAACTCAGATGCGCTGAAGCTAGCTAAAGAAGTTGATCCTCAAGGTC TGAGAACCATTGGAGTTATCACCAAACTGGACCTTATGGATGAAGGAACGGATGCCAGGGATGTTCTAGAGAACAAACTGTTGCCTCTTC GCAGGGGTTACGTGGGGGTGGTAAACAGAAGCCAGAAGGACATAGATGGGAAGAAGGACATAAAGGCAGCCATGCTGGCAGAGAGGAAGT TTTTCCTTTCCCACCCGGCTTACAGACATATCGCTGACCGAATGGGAACCCCACACCTGCAGAAGGTCCTTAATCAGCAACTTACCAACC ACATTCGGGATACCCTACCAAACTTCAGGAACAAACTACAGGGACAGTTGCTCTCCATAGAACATGAAGTAGAAGCCTACAAAAATTTCA AACCAGAAGACCCAACAAGGAAGACCAAAGCATTGCTGCAGATGGTTCAGCAATTTGCTGTGGACTTTGAGAAGAGAATTGAAGGGTCAG GGGATCAAGTAGATACCCTGGAACTCTCAGGTGGTGCTAAAATCAATCGTATTTTTCATGAACGCTTTCCTTTTGAGATAGTAAAGATGG AGTTCAATGAGAAAGAATTGCGAAGAGAAATAAGCTATGCAATCAAAAACATACATGGTATCAGGACAGGGTTGTTTACTCCAGACATGG CATTTGAAGCGATAGTCAAGAAACAGATTGTAAAGTTGAAAGGGCCTTCCTTGAAGAGTGTGGATCTGGTAATACAAGAATTAATCAACA CTGTGAAGAAGTGTACCAAAAAACTGGCAAACTTCCCCAGACTCTGCGAGGAAACGGAAAGGATTGTTGCTAACCACATTCGTGAGCGAG AAGGGAAGACAAAGGACCAGGTATTGCTATTGATTGACATTCAAGTCTCTTACATCAACACCAACCATGAAGACTTCATTGGCTTCGCAA ATGCTCAGCAGAGGAGCAGTCAGGTTCACAAGAAAACCACAGTTGGAAATCAGGTGATTCGCAAGGGGTGGCTCACCATCAGCAACATTG GCATCATGAAAGGCGGCTCGAAGGGATACTGGTTCGTCCTTACTGCGGAAAGCTTGTCCTGGTATAAAGATGATGAGGAAAAAGAAAAGA AGTACATGCTTCCCTTGGACAACCTGAAAGTTCGGGATGTGGAAAAGAGCTTTATGTCTAGCAAGCACATCTTTGCACTCTTTAATACAG AGCAAAGAGACACATGCCATGAACTCTTGGGACATGTTCCACTACTTGCGGATCCTAAGTTTGCTCAGTTTTCACAAGAAATAGGTCTGG CGTCTCTGGGAGCATCAGATGAAGATGTTCAGAAACTAGCCACGTGCTATTTCTTCACAATCGAGTTTGGCCTTTGCAAGCAAGAAGGGC AACTGCGGGCATATGGAGCAGGACTCCTTTCCTCCATTGGAGAATTAAAGCACGCCCTTTCTGACAAGGCATGTGTGAAAGCCTTTGACC CAAAGACAACTTGCTTACAGGAATGCCTTATCACCACCTTCCAGGAAGCCTACTTTGTTTCAGAAAGTTTTGAAGAAGCCAAAGAAAAGA TGAGGGACTTTGCAAAGTCAATTACCCGTCCCTTCTCAGTATACTTCAATCCCTACACACAGAGTATTGAAATTCTGAAAGACACCAGAA GTATTGAAAATGTGGTGCAGGACCTTCGCAGCGACTTGAATACAGTGTGTGATGCTTTAAACAAAATGAACCAATATCTGGGGATTTGAT GCCTGGAACTATGTTGTTGCCAGCATGATCTTTTTGGGGCTTAGCAGCAGTTCAGTCAATGTCATATAACGCAAATAACCTTCTGTGTCA TGGCTTGGCTAATAAGCATGCAATTCCATATATCTATACCATCTTGTAACTCACTGTGTTAGTATATAAAGCACCATAAGAAATCCAATG GCAGATAACCACTCATTGTATGAAATAACGTATTATGTTTAAACATCTTAAAAAGATTTGACATTCCTGCTTAGTGTCCTTAACCAAACT GCATCTAGTTAAAATTTGTAACAAATAGCCCTCTTATGAGTCTCATTTATGCCCTTTTCTTTTTCAGATCTAAGCCTTTCCTCTGTGTTC ATTAGATAAAATGAAAAAAAGCAGTGAAGCTGTTTCCATTTTCAATAGTATCAGTGTTTTCACGCATTATTTGAGATAAACCCAGAATTG TAGGAAACTTCCCATCACAATAACAAAGGTTCAATATTCTATTTCAAAAATTGTTGAGGTAACACAGCAGTTGGAATGATTTTTAGGTTG AGTATTTACACAATGCAAGAAAACACCTTTTTACAAATGGAATTATGTAGGTTGCGTTGACCTTGTAGAACCTGAGTTATGACAAGCTTC CTGAAGTATTTTGGAAGATAGTACTTCCGGAAAGGACATTAGGAAAGACTAAACAGTGGACAATCAATCTTGGGACTATGAATTTTATGC >In-frame_ENST00000520906_ENST00000333850_TCGA-DX-A3U6-01A_DNM3_chr1_172222822_+_TPH2_chr12_72388219_length(amino acids)=774AA_start in transcript=104_stop in transcript=2428 MVAGPSGKMGNREMEELIPLVNRLQDAFSALGQSCLLELPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVTSKAEYAE FLHCKGKKFTDFDEVRLEIEAETDRVTGMNKGISSIPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIREMIMQFITRENCLIL AVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYVGVVNRSQKDIDGKKDIKAAMLAERKFFLSH PAYRHIADRMGTPHLQKVLNQQLTNHIRDTLPNFRNKLQGQLLSIEHEVEAYKNFKPEDPTRKTKALLQMVQQFAVDFEKRIEGSGDQVD TLELSGGAKINRIFHERFPFEIVKMEFNEKELRREISYAIKNIHGIRTGLFTPDMAFEAIVKKQIVKLKGPSLKSVDLVIQELINTVKKC TKKLANFPRLCEETERIVANHIREREGKTKDQVLLLIDIQVSYINTNHEDFIGFANAQQRSSQVHKKTTVGNQVIRKGWLTISNIGIMKG GSKGYWFVLTAESLSWYKDDEEKEKKYMLPLDNLKVRDVEKSFMSSKHIFALFNTEQRDTCHELLGHVPLLADPKFAQFSQEIGLASLGA SDEDVQKLATCYFFTIEFGLCKQEGQLRAYGAGLLSSIGELKHALSDKACVKAFDPKTTCLQECLITTFQEAYFVSESFEEAKEKMRDFA -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for DNM3-TPH2 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for DNM3-TPH2 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for DNM3-TPH2 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | DNM3 | C0022665 | Kidney Neoplasm | 1 | CTD_human |
Hgene | DNM3 | C0740457 | Malignant neoplasm of kidney | 1 | CTD_human |
Tgene | TPH2 | C0011581 | Depressive disorder | 6 | CTD_human;PSYGENET |
Tgene | TPH2 | C0041696 | Unipolar Depression | 6 | CTD_human;PSYGENET |
Tgene | TPH2 | C0005586 | Bipolar Disorder | 5 | PSYGENET |
Tgene | TPH2 | C0011570 | Mental Depression | 5 | PSYGENET |
Tgene | TPH2 | C0525045 | Mood Disorders | 5 | PSYGENET |
Tgene | TPH2 | C1269683 | Major Depressive Disorder | 5 | CTD_human;PSYGENET |
Tgene | TPH2 | C0033975 | Psychotic Disorders | 2 | PSYGENET |
Tgene | TPH2 | C0036341 | Schizophrenia | 2 | PSYGENET |
Tgene | TPH2 | C0600427 | Cocaine Dependence | 2 | PSYGENET |
Tgene | TPH2 | C0004352 | Autistic Disorder | 1 | CTD_human |
Tgene | TPH2 | C0005587 | Depression, Bipolar | 1 | PSYGENET |
Tgene | TPH2 | C0011573 | Endogenous depression | 1 | CTD_human |
Tgene | TPH2 | C0015967 | Fever | 1 | CTD_human |
Tgene | TPH2 | C0025193 | Melancholia | 1 | CTD_human |
Tgene | TPH2 | C0036349 | Paranoid Schizophrenia | 1 | PSYGENET |
Tgene | TPH2 | C0085762 | Alcohol abuse | 1 | PSYGENET |
Tgene | TPH2 | C0086133 | Depressive Syndrome | 1 | CTD_human |
Tgene | TPH2 | C0282126 | Depression, Neurotic | 1 | CTD_human |
Tgene | TPH2 | C2751802 | ATTENTION DEFICIT-HYPERACTIVITY DISORDER, SUSCEPTIBILITY TO, 7 | 1 | UNIPROT |