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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:DOCK9-STK24 (FusionGDB2 ID:23832) |
Fusion Gene Summary for DOCK9-STK24 |
Fusion gene summary |
Fusion gene information | Fusion gene name: DOCK9-STK24 | Fusion gene ID: 23832 | Hgene | Tgene | Gene symbol | DOCK9 | STK24 | Gene ID | 23348 | 8428 |
Gene name | dedicator of cytokinesis 9 | serine/threonine kinase 24 | |
Synonyms | ZIZ1|ZIZIMIN1 | HEL-S-95|MST3|MST3B|STE20|STK3 | |
Cytomap | 13q32.3 | 13q32.2 | |
Type of gene | protein-coding | protein-coding | |
Description | dedicator of cytokinesis protein 9cdc42 guanine nucleotide exchange factor zizimin-1 | serine/threonine-protein kinase 24STE20-like kinase 3STE20-like kinase MST3epididymis secretory protein Li 95mammalian STE20-like protein kinase 3serine/threonine kinase 24 (STE20 homolog, yeast)sterile 20-like kinase 3 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | Q9BZ29 | . | |
Ensembl transtripts involved in fusion gene | ENST00000376460, ENST00000339416, ENST00000448493, ENST00000442173, ENST00000461998, | ENST00000397517, ENST00000539966, ENST00000481288, ENST00000376547, | |
Fusion gene scores | * DoF score | 13 X 11 X 7=1001 | 15 X 8 X 8=960 |
# samples | 15 | 18 | |
** MAII score | log2(15/1001*10)=-2.73840756834011 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(18/960*10)=-2.41503749927884 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: DOCK9 [Title/Abstract] AND STK24 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | STK24(99228999)-DOCK9(99462545), # samples:3 STK24(99228999)-DOCK9(99449507), # samples:3 STK24(99171497)-DOCK9(99532926), # samples:3 DOCK9(99607689)-STK24(99134575), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | STK24-DOCK9 seems lost the major protein functional domain in Hgene partner, which is a kinase due to the frame-shifted ORF. STK24-DOCK9 seems lost the major protein functional domain in Hgene partner, which is a IUPHAR drug target due to the frame-shifted ORF. STK24-DOCK9 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | STK24 | GO:0006468 | protein phosphorylation | 19604147 |
Tgene | STK24 | GO:0042542 | response to hydrogen peroxide | 22291017 |
Tgene | STK24 | GO:0046777 | protein autophosphorylation | 17046825|17657516 |
Fusion gene breakpoints across DOCK9 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across STK24 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | LUSC | TCGA-34-A5IX | DOCK9 | chr13 | 99607689 | - | STK24 | chr13 | 99134575 | - |
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Fusion Gene ORF analysis for DOCK9-STK24 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000376460 | ENST00000397517 | DOCK9 | chr13 | 99607689 | - | STK24 | chr13 | 99134575 | - |
5CDS-intron | ENST00000376460 | ENST00000539966 | DOCK9 | chr13 | 99607689 | - | STK24 | chr13 | 99134575 | - |
5CDS-intron | ENST00000376460 | ENST00000481288 | DOCK9 | chr13 | 99607689 | - | STK24 | chr13 | 99134575 | - |
5CDS-intron | ENST00000376460 | ENST00000376547 | DOCK9 | chr13 | 99607689 | - | STK24 | chr13 | 99134575 | - |
In-frame | ENST00000339416 | ENST00000397517 | DOCK9 | chr13 | 99607689 | - | STK24 | chr13 | 99134575 | - |
5CDS-intron | ENST00000339416 | ENST00000539966 | DOCK9 | chr13 | 99607689 | - | STK24 | chr13 | 99134575 | - |
5CDS-intron | ENST00000339416 | ENST00000481288 | DOCK9 | chr13 | 99607689 | - | STK24 | chr13 | 99134575 | - |
5CDS-intron | ENST00000339416 | ENST00000376547 | DOCK9 | chr13 | 99607689 | - | STK24 | chr13 | 99134575 | - |
In-frame | ENST00000448493 | ENST00000397517 | DOCK9 | chr13 | 99607689 | - | STK24 | chr13 | 99134575 | - |
5CDS-intron | ENST00000448493 | ENST00000539966 | DOCK9 | chr13 | 99607689 | - | STK24 | chr13 | 99134575 | - |
5CDS-intron | ENST00000448493 | ENST00000481288 | DOCK9 | chr13 | 99607689 | - | STK24 | chr13 | 99134575 | - |
5CDS-intron | ENST00000448493 | ENST00000376547 | DOCK9 | chr13 | 99607689 | - | STK24 | chr13 | 99134575 | - |
In-frame | ENST00000442173 | ENST00000397517 | DOCK9 | chr13 | 99607689 | - | STK24 | chr13 | 99134575 | - |
5CDS-intron | ENST00000442173 | ENST00000539966 | DOCK9 | chr13 | 99607689 | - | STK24 | chr13 | 99134575 | - |
5CDS-intron | ENST00000442173 | ENST00000481288 | DOCK9 | chr13 | 99607689 | - | STK24 | chr13 | 99134575 | - |
5CDS-intron | ENST00000442173 | ENST00000376547 | DOCK9 | chr13 | 99607689 | - | STK24 | chr13 | 99134575 | - |
intron-3CDS | ENST00000461998 | ENST00000397517 | DOCK9 | chr13 | 99607689 | - | STK24 | chr13 | 99134575 | - |
intron-intron | ENST00000461998 | ENST00000539966 | DOCK9 | chr13 | 99607689 | - | STK24 | chr13 | 99134575 | - |
intron-intron | ENST00000461998 | ENST00000481288 | DOCK9 | chr13 | 99607689 | - | STK24 | chr13 | 99134575 | - |
intron-intron | ENST00000461998 | ENST00000376547 | DOCK9 | chr13 | 99607689 | - | STK24 | chr13 | 99134575 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000376460 | DOCK9 | chr13 | 99607689 | - | ENST00000397517 | STK24 | chr13 | 99134575 | - | 4319 | 324 | 0 | 1346 | 448 |
ENST00000339416 | DOCK9 | chr13 | 99607689 | - | ENST00000397517 | STK24 | chr13 | 99134575 | - | 4296 | 301 | 55 | 1323 | 422 |
ENST00000448493 | DOCK9 | chr13 | 99607689 | - | ENST00000397517 | STK24 | chr13 | 99134575 | - | 4385 | 390 | 6 | 1412 | 468 |
ENST00000442173 | DOCK9 | chr13 | 99607689 | - | ENST00000397517 | STK24 | chr13 | 99134575 | - | 4413 | 418 | 25 | 1440 | 471 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000376460 | ENST00000397517 | DOCK9 | chr13 | 99607689 | - | STK24 | chr13 | 99134575 | - | 0.000765926 | 0.9992341 |
ENST00000339416 | ENST00000397517 | DOCK9 | chr13 | 99607689 | - | STK24 | chr13 | 99134575 | - | 0.001263596 | 0.99873644 |
ENST00000448493 | ENST00000397517 | DOCK9 | chr13 | 99607689 | - | STK24 | chr13 | 99134575 | - | 0.001000979 | 0.99899906 |
ENST00000442173 | ENST00000397517 | DOCK9 | chr13 | 99607689 | - | STK24 | chr13 | 99134575 | - | 0.000777327 | 0.99922264 |
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Fusion Genomic Features for DOCK9-STK24 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for DOCK9-STK24 |
Go to FGviewer for the breakpoints of chr13:99607689-chr13:99134575 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
DOCK9 | . |
FUNCTION: Guanine nucleotide-exchange factor (GEF) that activates CDC42 by exchanging bound GDP for free GTP. Overexpression induces filopodia formation. {ECO:0000269|PubMed:12172552, ECO:0000269|PubMed:19745154}. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | STK24 | chr13:99607689 | chr13:99134575 | ENST00000376547 | 1 | 11 | 278_292 | 103.0 | 444.0 | Motif | Note=Bipartite nuclear localization signal | |
Tgene | STK24 | chr13:99607689 | chr13:99134575 | ENST00000376547 | 1 | 11 | 335_386 | 103.0 | 444.0 | Motif | Note=Nuclear export signal (NES) | |
Tgene | STK24 | chr13:99607689 | chr13:99134575 | ENST00000397517 | 1 | 11 | 278_292 | 91.0 | 432.0 | Motif | Note=Bipartite nuclear localization signal | |
Tgene | STK24 | chr13:99607689 | chr13:99134575 | ENST00000397517 | 1 | 11 | 335_386 | 91.0 | 432.0 | Motif | Note=Nuclear export signal (NES) | |
Tgene | STK24 | chr13:99607689 | chr13:99134575 | ENST00000376547 | 1 | 11 | 112_114 | 103.0 | 444.0 | Nucleotide binding | Note=ATP | |
Tgene | STK24 | chr13:99607689 | chr13:99134575 | ENST00000397517 | 1 | 11 | 112_114 | 91.0 | 432.0 | Nucleotide binding | Note=ATP |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | DOCK9 | chr13:99607689 | chr13:99134575 | ENST00000339416 | - | 2 | 54 | 1948_1982 | 82.0 | 2094.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | DOCK9 | chr13:99607689 | chr13:99134575 | ENST00000339416 | - | 2 | 54 | 2034_2067 | 82.0 | 2094.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | DOCK9 | chr13:99607689 | chr13:99134575 | ENST00000376460 | - | 2 | 57 | 1948_1982 | 81.0 | 2069.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | DOCK9 | chr13:99607689 | chr13:99134575 | ENST00000376460 | - | 2 | 57 | 2034_2067 | 81.0 | 2069.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | DOCK9 | chr13:99607689 | chr13:99134575 | ENST00000442173 | - | 2 | 33 | 1948_1982 | 81.0 | 1254.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | DOCK9 | chr13:99607689 | chr13:99134575 | ENST00000442173 | - | 2 | 33 | 2034_2067 | 81.0 | 1254.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | DOCK9 | chr13:99607689 | chr13:99134575 | ENST00000339416 | - | 2 | 54 | 1605_2069 | 82.0 | 2094.0 | Domain | DOCKER |
Hgene | DOCK9 | chr13:99607689 | chr13:99134575 | ENST00000339416 | - | 2 | 54 | 174_281 | 82.0 | 2094.0 | Domain | PH |
Hgene | DOCK9 | chr13:99607689 | chr13:99134575 | ENST00000339416 | - | 2 | 54 | 640_818 | 82.0 | 2094.0 | Domain | C2 DOCK-type |
Hgene | DOCK9 | chr13:99607689 | chr13:99134575 | ENST00000376460 | - | 2 | 57 | 1605_2069 | 81.0 | 2069.0 | Domain | DOCKER |
Hgene | DOCK9 | chr13:99607689 | chr13:99134575 | ENST00000376460 | - | 2 | 57 | 174_281 | 81.0 | 2069.0 | Domain | PH |
Hgene | DOCK9 | chr13:99607689 | chr13:99134575 | ENST00000376460 | - | 2 | 57 | 640_818 | 81.0 | 2069.0 | Domain | C2 DOCK-type |
Hgene | DOCK9 | chr13:99607689 | chr13:99134575 | ENST00000442173 | - | 2 | 33 | 1605_2069 | 81.0 | 1254.0 | Domain | DOCKER |
Hgene | DOCK9 | chr13:99607689 | chr13:99134575 | ENST00000442173 | - | 2 | 33 | 174_281 | 81.0 | 1254.0 | Domain | PH |
Hgene | DOCK9 | chr13:99607689 | chr13:99134575 | ENST00000442173 | - | 2 | 33 | 640_818 | 81.0 | 1254.0 | Domain | C2 DOCK-type |
Tgene | STK24 | chr13:99607689 | chr13:99134575 | ENST00000376547 | 1 | 11 | 36_286 | 103.0 | 444.0 | Domain | Protein kinase | |
Tgene | STK24 | chr13:99607689 | chr13:99134575 | ENST00000397517 | 1 | 11 | 36_286 | 91.0 | 432.0 | Domain | Protein kinase | |
Tgene | STK24 | chr13:99607689 | chr13:99134575 | ENST00000376547 | 1 | 11 | 42_50 | 103.0 | 444.0 | Nucleotide binding | Note=ATP | |
Tgene | STK24 | chr13:99607689 | chr13:99134575 | ENST00000397517 | 1 | 11 | 42_50 | 91.0 | 432.0 | Nucleotide binding | Note=ATP |
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Fusion Gene Sequence for DOCK9-STK24 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000376460_ENST00000397517_TCGA-34-A5IX_DOCK9_chr13_99607689_-_STK24_chr13_99134575_length(transcript)=4319nt_BP=324nt CTGGCATGCCTGTGCCTTGCACGGCCAGGGACTCGCAGCTGTTCCAGTTGCAGACTTTCTGACTTGCGTTTTCAGCCGAGAATGCAGGCT GATAAATGCAGGACAAGTAGTAGAAGTGTCAAAAAGGAACTGGTGATTGAGTCCCCCCTGCAATACAAGGATGCAGCTCAGGGCGAAGTG GAAGCAGAGAGCCCGGGCCCTGTGCCGGCAAAGCCAAAGCTAATTGAGCCACTCGACTATGAAAATGTCATCGTCCAGAAGAAGACTCAG ATCCTGAACGACTGTTTACGGGAGATGCTGCTCTTCCCTTACGATGACTTTCAGGATACAAAATTATGGATAATAATGGAATATCTTGGT GGAGGCTCCGCACTAGATCTATTAGAACCTGGCCCATTAGATGAAACCCAGATCGCTACTATATTAAGAGAAATACTGAAAGGACTCGAT TATCTCCATTCGGAGAAGAAAATCCACAGAGACATTAAAGCGGCCAACGTCCTGCTGTCTGAGCATGGCGAGGTGAAGCTGGCGGACTTT GGCGTGGCTGGCCAGCTGACAGACACCCAGATCAAAAGGAACACCTTCGTGGGCACCCCATTCTGGATGGCACCCGAGGTCATCAAACAG TCGGCCTATGACTCGAAGGCAGACATCTGGTCCCTGGGCATAACAGCTATTGAACTTGCAAGAGGGGAACCACCTCATTCCGAGCTGCAC CCCATGAAAGTTTTATTCCTCATTCCAAAGAACAACCCACCGACGTTGGAAGGAAACTACAGTAAACCCCTCAAGGAGTTTGTGGAGGCC TGTTTGAATAAGGAGCCGAGCTTTAGACCCACTGCTAAGGAGTTATTGAAGCACAAGTTTATACTACGCAATGCAAAGAAAACTTCCTAC TTGACCGAGCTCATCGACAGGTACAAGAGATGGAAGGCCGAGCAGAGCCATGACGACTCGAGCTCCGAGGATTCCGACGCGGAAACAGAT GGCCAAGCCTCGGGGGGCAGTGATTCTGGGGACTGGATCTTCACAATCCGAGAAAAAGATCCCAAGAATCTCGAGAATGGAGCTCTTCAG CCATCGGACTTGGACAGAAATAAGATGAAAGACATCCCGAAGAGGCCTTTCTCTCAGTGTTTATCTACAATTATTTCTCCTCTGTTTGCA GAGTTGAAGGAGAAGAGCCAGGCGTGCGGAGGGAACTTGGGGTCCATTGAAGAGCTGCGAGGGGCCATCTACCTAGCGGAGGAGGCGTGC CCTGGCATCTCCGACACCATGGTGGCCCAGCTCGTGCAGCGGCTCCAGAGATACTCTCTAAGTGGTGGAGGAACTTCATCCCACTGAAAT TCCTTTGGCATTTGGGGTTTTGTTTTTCCTTTTTTCCTTCTTCATCCTCCTCCTTTTTTAAAAGTCAACGAGAGCCTTCGCTGACTCCAC CGAAGAGGTGCGCCACTGGGAGCCACCCCAGCGCCAGGCGCCCGTCCAGGGACACACACAGTCTTCACTGTGCTGCAGCCAGATGAAGTC TCTCAGATGGGTGGGGAGGGTCAGCTCCTTCCAGCGATCATTTTATTTTATTTTATTACTTTTGTTTTTAATTTTAACCATAGTGCACAT ATTCCAGGAAAGTGTCTTTAAAAACAAAAACAAACCCTGAAATGTATATTTGGGATTATGATAAGGCAACTAAAGACATGAAACCTCAGG TATCCTGCTTTAAGTTGATAACTCCCTCTGGGAGCTGGAGAATCGCTCTGGTGGATGGGTGTACAGATTTGTATATAATGTCATTTTTAC GGAAACCCTTTCGGCGTGCATAAGGAATCACTGTGTACAAACTGGCCAAGTGCTTCTGTAGATAACGTCAGTGGAGTAAATATTCGACAG GCCATAACTTGAGTCTATTGCCTTGCCTTTATTACATGTACATTTTGAATTCTGTGACCAGTGATTTGGGTTTTATTTTGTATTTGCAGG GTTTGTCATTAATAATTAATGCCCCTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGCCCTACGCCC CTTTTGGTACACCTAGAGGTTGATTTCCTTTTTCATCGATGGTACTATTTCTTAGTGTTTTAAATTGGAACATATCTTGCCTCATGAAGC TTTAAATTATAATTTTCAGTTTCTCCCCATGAAGCGCTCTCGTCTGACATTTGTTTGGAATCGTGCCACTGCTGGTCTGCGCCAGATGTA CCGTCCTTTCCAATACGATTTTCTGTTGCACCTTGTAGTGGATTCTGCATATCATCTTTCCCACCTAAAAATGTCTGAATGCTTACACAA ATAAATTTTATAACACGCTTATTTTGCATACTCCTTGAAATGTGACTCTTCAGAGGACAGGGCACCTGCTGTGTATGTGTGGCCGTGCGT GTGTACTCGTGGCTGTGTGTGTGTGATGAGACACTTTGGAAGACTCCAGGGAGAAGTCCCCAGGCCTGGAGCTGCCGAGTGCCCAGGTCA GCGCCCTGGACTGCTTGCGCACTTGCTCACCGAGATGATGCAGTTGGAGGTTGCTGATCTGTGCGATTGCTGTAGCGGTTGCCGGGGACC TTAAGAGTTATTTTGCTTCTCTGGAAGGGGCCTATGCTTGCTAGGCAGGCAGCCAGTGTGTCTGTTTTTCTTGGTTTGCTGTGGGACCTT GCTTGGCGAGGGGGAAAATCTCTGGGTTTCTGGAGTGGGAGGGTTCGTGCAGCAGCTGTTGACTGGTACATGAAGCATTCTTTTATGTTT GTTGAAGCTGATGATTGACATCTCCCGTGGGTGTGCCAGTTCTTGTGGAGTTAAGACAGGATTTTTGGAAGCAAGGAAGTTAGTGGGTGA GCTTGGGGATGTAGCTCAGCTATCTGCTGGTCTAGTGGCCTCTAAGCTATAGGGAGGGGACAGAGCCCTGAGCTACAGATGCTTGAGTGG GTTATTGTGTCGGTTTGCTAGTGCAGTCTGGTTTTTAAGCTCTAAAATTGAGGTATTTTATTAGAAGTGGATTTGGGTTGAACTCTTAAT TTGTATAAGGGATATATTTTGGTTGGGGAAATAGAACTGAGTTGCTAATTCTTATTGTACTCATTACTCCATACAAGAATGTTATGTTGA ATAATAAAATTGGAGAAGATTTCATTTTGTGTTTCCAGGGAGTATTCTGTGTGGGGAACTGTTTCCTTACGTGAGGCCGGCGGCATAAGT CAAAGATGAGTTTTGTCCTTGCGAATCACACAGATTGAGTCTGTGTTCCCCAGGGTGTGCCGTTACCTGATTTTTAAGTGAGCCAGGGCG GACAGCAGCTTTTCTGATTTACAGAGTTCTTCAGATTTACAAATGGACAATGACATCACAGTTTTTAGCACTGAAGCCAGTCTCATGCTA GTAACAGTGGGTGAGCCGCTCGAGGGACTGGGTTCTAATGAATACTGGTATGAACGGGGAGTCTCTGCAGTCGCCAGACAAATCATACTC AGCCCCTTCCCCCGTAGAGCAACAAGTGGTTCTTTTAGAGTTGACTGGCAGCATTTCCTGTCGGGGGAGGTGGGGTTTGATGGAGTTAGA AAGCTCGCCTCTGTGTACATTCTCTCCTGGGCTGTTACTTTCTGTAGACGCACAAAATCAGCCCCAATGTTTTTAAGGGCATCTTAGCCA AGGAAGCTGGCTTTTGTGTCGCCACTTCCAGGCCTGCATTAAGAGAGAGCCCAGGCACCAGGGCTACCACTGGAACCTGCCTCAGCGTCA ACTGCTGCTGGTCTGTAGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCCAGCCCTGAGCTGCTCCTGGC TCAGCTGCCCAGAGCCTGCAGCCTGGGGAGGTACTCAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTT GAGCTGTGTCCTGGCTGGCTGCTGCCAATGAGGTGGACACCAGTGTGGTTTGGGGTGCACTGGCCACTTCTTGCTGGGTTCTGATTTTCT TGGAAGTGCATCTGCCTTCCTTATCCAATAGTTTTATCCCTGCATTGCTCTTGTGAAGTGGCTGGTTTGGTTCTGTATGTAGCATTTTGT ACCTTTCCTCTGGCAAAACACTGTCAGTTTATAAACATTTTTTATATTTCCCTCCTTTAAAAACAGCTTGTGTATTTCTGCTATAAAATG >In-frame_ENST00000376460_ENST00000397517_TCGA-34-A5IX_DOCK9_chr13_99607689_-_STK24_chr13_99134575_length(amino acids)=448AA_start in transcript=0_stop in transcript=1346 LACLCLARPGTRSCSSCRLSDLRFQPRMQADKCRTSSRSVKKELVIESPLQYKDAAQGEVEAESPGPVPAKPKLIEPLDYENVIVQKKTQ ILNDCLREMLLFPYDDFQDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADF GVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEA CLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWKAEQSHDDSSSEDSDAETDGQASGGSDSGDWIFTIREKDPKNLENGALQ -------------------------------------------------------------- >In-frame_ENST00000339416_ENST00000397517_TCGA-34-A5IX_DOCK9_chr13_99607689_-_STK24_chr13_99134575_length(transcript)=4296nt_BP=301nt GCGGCCGGGCCGGGCCGCGGGAGCAGGCGGAGGCGGAGGCGGCGGGGGCAGGAGGATGTCGCAGCCGCCGCTGCTCCCCGCCTCGGCGGA GACTCGGAAGTTCACCCGGGCGCTGAGTAAGCCGGGCACGGCGGCCGAGCTGCGGCAGAGCGTGTCTGAGGTGGTGCGCGGCTCCGTGCT CCTGGCAAAGCCAAAGCTAATTGAGCCACTCGACTATGAAAATGTCATCGTCCAGAAGAAGACTCAGATCCTGAACGACTGTTTACGGGA GATGCTGCTCTTCCCTTACGATGACTTTCAGGATACAAAATTATGGATAATAATGGAATATCTTGGTGGAGGCTCCGCACTAGATCTATT AGAACCTGGCCCATTAGATGAAACCCAGATCGCTACTATATTAAGAGAAATACTGAAAGGACTCGATTATCTCCATTCGGAGAAGAAAAT CCACAGAGACATTAAAGCGGCCAACGTCCTGCTGTCTGAGCATGGCGAGGTGAAGCTGGCGGACTTTGGCGTGGCTGGCCAGCTGACAGA CACCCAGATCAAAAGGAACACCTTCGTGGGCACCCCATTCTGGATGGCACCCGAGGTCATCAAACAGTCGGCCTATGACTCGAAGGCAGA CATCTGGTCCCTGGGCATAACAGCTATTGAACTTGCAAGAGGGGAACCACCTCATTCCGAGCTGCACCCCATGAAAGTTTTATTCCTCAT TCCAAAGAACAACCCACCGACGTTGGAAGGAAACTACAGTAAACCCCTCAAGGAGTTTGTGGAGGCCTGTTTGAATAAGGAGCCGAGCTT TAGACCCACTGCTAAGGAGTTATTGAAGCACAAGTTTATACTACGCAATGCAAAGAAAACTTCCTACTTGACCGAGCTCATCGACAGGTA CAAGAGATGGAAGGCCGAGCAGAGCCATGACGACTCGAGCTCCGAGGATTCCGACGCGGAAACAGATGGCCAAGCCTCGGGGGGCAGTGA TTCTGGGGACTGGATCTTCACAATCCGAGAAAAAGATCCCAAGAATCTCGAGAATGGAGCTCTTCAGCCATCGGACTTGGACAGAAATAA GATGAAAGACATCCCGAAGAGGCCTTTCTCTCAGTGTTTATCTACAATTATTTCTCCTCTGTTTGCAGAGTTGAAGGAGAAGAGCCAGGC GTGCGGAGGGAACTTGGGGTCCATTGAAGAGCTGCGAGGGGCCATCTACCTAGCGGAGGAGGCGTGCCCTGGCATCTCCGACACCATGGT GGCCCAGCTCGTGCAGCGGCTCCAGAGATACTCTCTAAGTGGTGGAGGAACTTCATCCCACTGAAATTCCTTTGGCATTTGGGGTTTTGT TTTTCCTTTTTTCCTTCTTCATCCTCCTCCTTTTTTAAAAGTCAACGAGAGCCTTCGCTGACTCCACCGAAGAGGTGCGCCACTGGGAGC CACCCCAGCGCCAGGCGCCCGTCCAGGGACACACACAGTCTTCACTGTGCTGCAGCCAGATGAAGTCTCTCAGATGGGTGGGGAGGGTCA GCTCCTTCCAGCGATCATTTTATTTTATTTTATTACTTTTGTTTTTAATTTTAACCATAGTGCACATATTCCAGGAAAGTGTCTTTAAAA ACAAAAACAAACCCTGAAATGTATATTTGGGATTATGATAAGGCAACTAAAGACATGAAACCTCAGGTATCCTGCTTTAAGTTGATAACT CCCTCTGGGAGCTGGAGAATCGCTCTGGTGGATGGGTGTACAGATTTGTATATAATGTCATTTTTACGGAAACCCTTTCGGCGTGCATAA GGAATCACTGTGTACAAACTGGCCAAGTGCTTCTGTAGATAACGTCAGTGGAGTAAATATTCGACAGGCCATAACTTGAGTCTATTGCCT TGCCTTTATTACATGTACATTTTGAATTCTGTGACCAGTGATTTGGGTTTTATTTTGTATTTGCAGGGTTTGTCATTAATAATTAATGCC CCTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGCCCTACGCCCCTTTTGGTACACCTAGAGGTTGA TTTCCTTTTTCATCGATGGTACTATTTCTTAGTGTTTTAAATTGGAACATATCTTGCCTCATGAAGCTTTAAATTATAATTTTCAGTTTC TCCCCATGAAGCGCTCTCGTCTGACATTTGTTTGGAATCGTGCCACTGCTGGTCTGCGCCAGATGTACCGTCCTTTCCAATACGATTTTC TGTTGCACCTTGTAGTGGATTCTGCATATCATCTTTCCCACCTAAAAATGTCTGAATGCTTACACAAATAAATTTTATAACACGCTTATT TTGCATACTCCTTGAAATGTGACTCTTCAGAGGACAGGGCACCTGCTGTGTATGTGTGGCCGTGCGTGTGTACTCGTGGCTGTGTGTGTG TGATGAGACACTTTGGAAGACTCCAGGGAGAAGTCCCCAGGCCTGGAGCTGCCGAGTGCCCAGGTCAGCGCCCTGGACTGCTTGCGCACT TGCTCACCGAGATGATGCAGTTGGAGGTTGCTGATCTGTGCGATTGCTGTAGCGGTTGCCGGGGACCTTAAGAGTTATTTTGCTTCTCTG GAAGGGGCCTATGCTTGCTAGGCAGGCAGCCAGTGTGTCTGTTTTTCTTGGTTTGCTGTGGGACCTTGCTTGGCGAGGGGGAAAATCTCT GGGTTTCTGGAGTGGGAGGGTTCGTGCAGCAGCTGTTGACTGGTACATGAAGCATTCTTTTATGTTTGTTGAAGCTGATGATTGACATCT CCCGTGGGTGTGCCAGTTCTTGTGGAGTTAAGACAGGATTTTTGGAAGCAAGGAAGTTAGTGGGTGAGCTTGGGGATGTAGCTCAGCTAT CTGCTGGTCTAGTGGCCTCTAAGCTATAGGGAGGGGACAGAGCCCTGAGCTACAGATGCTTGAGTGGGTTATTGTGTCGGTTTGCTAGTG CAGTCTGGTTTTTAAGCTCTAAAATTGAGGTATTTTATTAGAAGTGGATTTGGGTTGAACTCTTAATTTGTATAAGGGATATATTTTGGT TGGGGAAATAGAACTGAGTTGCTAATTCTTATTGTACTCATTACTCCATACAAGAATGTTATGTTGAATAATAAAATTGGAGAAGATTTC ATTTTGTGTTTCCAGGGAGTATTCTGTGTGGGGAACTGTTTCCTTACGTGAGGCCGGCGGCATAAGTCAAAGATGAGTTTTGTCCTTGCG AATCACACAGATTGAGTCTGTGTTCCCCAGGGTGTGCCGTTACCTGATTTTTAAGTGAGCCAGGGCGGACAGCAGCTTTTCTGATTTACA GAGTTCTTCAGATTTACAAATGGACAATGACATCACAGTTTTTAGCACTGAAGCCAGTCTCATGCTAGTAACAGTGGGTGAGCCGCTCGA GGGACTGGGTTCTAATGAATACTGGTATGAACGGGGAGTCTCTGCAGTCGCCAGACAAATCATACTCAGCCCCTTCCCCCGTAGAGCAAC AAGTGGTTCTTTTAGAGTTGACTGGCAGCATTTCCTGTCGGGGGAGGTGGGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTGTACATTCT CTCCTGGGCTGTTACTTTCTGTAGACGCACAAAATCAGCCCCAATGTTTTTAAGGGCATCTTAGCCAAGGAAGCTGGCTTTTGTGTCGCC ACTTCCAGGCCTGCATTAAGAGAGAGCCCAGGCACCAGGGCTACCACTGGAACCTGCCTCAGCGTCAACTGCTGCTGGTCTGTAGCCAGG CCCAGCCTTTGAGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCCAGCCCTGAGCTGCTCCTGGCTCAGCTGCCCAGAGCCTGCAGCC TGGGGAGGTACTCAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGTCCTGGCTGGCTGCT GCCAATGAGGTGGACACCAGTGTGGTTTGGGGTGCACTGGCCACTTCTTGCTGGGTTCTGATTTTCTTGGAAGTGCATCTGCCTTCCTTA TCCAATAGTTTTATCCCTGCATTGCTCTTGTGAAGTGGCTGGTTTGGTTCTGTATGTAGCATTTTGTACCTTTCCTCTGGCAAAACACTG TCAGTTTATAAACATTTTTTATATTTCCCTCCTTTAAAAACAGCTTGTGTATTTCTGCTATAAAATGTGTCAGCAAAGGCAGAGTGACCT >In-frame_ENST00000339416_ENST00000397517_TCGA-34-A5IX_DOCK9_chr13_99607689_-_STK24_chr13_99134575_length(amino acids)=422AA_start in transcript=55_stop in transcript=1323 MSQPPLLPASAETRKFTRALSKPGTAAELRQSVSEVVRGSVLLAKPKLIEPLDYENVIVQKKTQILNDCLREMLLFPYDDFQDTKLWIIM EYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAK KTSYLTELIDRYKRWKAEQSHDDSSSEDSDAETDGQASGGSDSGDWIFTIREKDPKNLENGALQPSDLDRNKMKDIPKRPFSQCLSTIIS -------------------------------------------------------------- >In-frame_ENST00000448493_ENST00000397517_TCGA-34-A5IX_DOCK9_chr13_99607689_-_STK24_chr13_99134575_length(transcript)=4385nt_BP=390nt GACTGCTTGTCACGAAGATGGTACAGTGGGAGCCTGTTTCGGAAGAGCCAAGGAAGAGGATGTGGAAATGGAGTAGAGATTGCTAAAAAA CTGAACATCCACACCTTGGGGATGGGTTGCACTACTAGTGTGATTCTGTTTAAAGGCATCCGCACCGTTTTTGAAAGAAACTGTGCTTAT ATGTGCAAACAGCAAGGAGAGAATAATGCCCTTGAATATACAGCATACAATTGGACAAAAGAAGATTCAGAACTATTGATCTCCTCCTGG CTGGCAAAGCCAAAGCTAATTGAGCCACTCGACTATGAAAATGTCATCGTCCAGAAGAAGACTCAGATCCTGAACGACTGTTTACGGGAG ATGCTGCTCTTCCCTTACGATGACTTTCAGGATACAAAATTATGGATAATAATGGAATATCTTGGTGGAGGCTCCGCACTAGATCTATTA GAACCTGGCCCATTAGATGAAACCCAGATCGCTACTATATTAAGAGAAATACTGAAAGGACTCGATTATCTCCATTCGGAGAAGAAAATC CACAGAGACATTAAAGCGGCCAACGTCCTGCTGTCTGAGCATGGCGAGGTGAAGCTGGCGGACTTTGGCGTGGCTGGCCAGCTGACAGAC ACCCAGATCAAAAGGAACACCTTCGTGGGCACCCCATTCTGGATGGCACCCGAGGTCATCAAACAGTCGGCCTATGACTCGAAGGCAGAC ATCTGGTCCCTGGGCATAACAGCTATTGAACTTGCAAGAGGGGAACCACCTCATTCCGAGCTGCACCCCATGAAAGTTTTATTCCTCATT CCAAAGAACAACCCACCGACGTTGGAAGGAAACTACAGTAAACCCCTCAAGGAGTTTGTGGAGGCCTGTTTGAATAAGGAGCCGAGCTTT AGACCCACTGCTAAGGAGTTATTGAAGCACAAGTTTATACTACGCAATGCAAAGAAAACTTCCTACTTGACCGAGCTCATCGACAGGTAC AAGAGATGGAAGGCCGAGCAGAGCCATGACGACTCGAGCTCCGAGGATTCCGACGCGGAAACAGATGGCCAAGCCTCGGGGGGCAGTGAT TCTGGGGACTGGATCTTCACAATCCGAGAAAAAGATCCCAAGAATCTCGAGAATGGAGCTCTTCAGCCATCGGACTTGGACAGAAATAAG ATGAAAGACATCCCGAAGAGGCCTTTCTCTCAGTGTTTATCTACAATTATTTCTCCTCTGTTTGCAGAGTTGAAGGAGAAGAGCCAGGCG TGCGGAGGGAACTTGGGGTCCATTGAAGAGCTGCGAGGGGCCATCTACCTAGCGGAGGAGGCGTGCCCTGGCATCTCCGACACCATGGTG GCCCAGCTCGTGCAGCGGCTCCAGAGATACTCTCTAAGTGGTGGAGGAACTTCATCCCACTGAAATTCCTTTGGCATTTGGGGTTTTGTT TTTCCTTTTTTCCTTCTTCATCCTCCTCCTTTTTTAAAAGTCAACGAGAGCCTTCGCTGACTCCACCGAAGAGGTGCGCCACTGGGAGCC ACCCCAGCGCCAGGCGCCCGTCCAGGGACACACACAGTCTTCACTGTGCTGCAGCCAGATGAAGTCTCTCAGATGGGTGGGGAGGGTCAG CTCCTTCCAGCGATCATTTTATTTTATTTTATTACTTTTGTTTTTAATTTTAACCATAGTGCACATATTCCAGGAAAGTGTCTTTAAAAA CAAAAACAAACCCTGAAATGTATATTTGGGATTATGATAAGGCAACTAAAGACATGAAACCTCAGGTATCCTGCTTTAAGTTGATAACTC CCTCTGGGAGCTGGAGAATCGCTCTGGTGGATGGGTGTACAGATTTGTATATAATGTCATTTTTACGGAAACCCTTTCGGCGTGCATAAG GAATCACTGTGTACAAACTGGCCAAGTGCTTCTGTAGATAACGTCAGTGGAGTAAATATTCGACAGGCCATAACTTGAGTCTATTGCCTT GCCTTTATTACATGTACATTTTGAATTCTGTGACCAGTGATTTGGGTTTTATTTTGTATTTGCAGGGTTTGTCATTAATAATTAATGCCC CTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGCCCTACGCCCCTTTTGGTACACCTAGAGGTTGAT TTCCTTTTTCATCGATGGTACTATTTCTTAGTGTTTTAAATTGGAACATATCTTGCCTCATGAAGCTTTAAATTATAATTTTCAGTTTCT CCCCATGAAGCGCTCTCGTCTGACATTTGTTTGGAATCGTGCCACTGCTGGTCTGCGCCAGATGTACCGTCCTTTCCAATACGATTTTCT GTTGCACCTTGTAGTGGATTCTGCATATCATCTTTCCCACCTAAAAATGTCTGAATGCTTACACAAATAAATTTTATAACACGCTTATTT TGCATACTCCTTGAAATGTGACTCTTCAGAGGACAGGGCACCTGCTGTGTATGTGTGGCCGTGCGTGTGTACTCGTGGCTGTGTGTGTGT GATGAGACACTTTGGAAGACTCCAGGGAGAAGTCCCCAGGCCTGGAGCTGCCGAGTGCCCAGGTCAGCGCCCTGGACTGCTTGCGCACTT GCTCACCGAGATGATGCAGTTGGAGGTTGCTGATCTGTGCGATTGCTGTAGCGGTTGCCGGGGACCTTAAGAGTTATTTTGCTTCTCTGG AAGGGGCCTATGCTTGCTAGGCAGGCAGCCAGTGTGTCTGTTTTTCTTGGTTTGCTGTGGGACCTTGCTTGGCGAGGGGGAAAATCTCTG GGTTTCTGGAGTGGGAGGGTTCGTGCAGCAGCTGTTGACTGGTACATGAAGCATTCTTTTATGTTTGTTGAAGCTGATGATTGACATCTC CCGTGGGTGTGCCAGTTCTTGTGGAGTTAAGACAGGATTTTTGGAAGCAAGGAAGTTAGTGGGTGAGCTTGGGGATGTAGCTCAGCTATC TGCTGGTCTAGTGGCCTCTAAGCTATAGGGAGGGGACAGAGCCCTGAGCTACAGATGCTTGAGTGGGTTATTGTGTCGGTTTGCTAGTGC AGTCTGGTTTTTAAGCTCTAAAATTGAGGTATTTTATTAGAAGTGGATTTGGGTTGAACTCTTAATTTGTATAAGGGATATATTTTGGTT GGGGAAATAGAACTGAGTTGCTAATTCTTATTGTACTCATTACTCCATACAAGAATGTTATGTTGAATAATAAAATTGGAGAAGATTTCA TTTTGTGTTTCCAGGGAGTATTCTGTGTGGGGAACTGTTTCCTTACGTGAGGCCGGCGGCATAAGTCAAAGATGAGTTTTGTCCTTGCGA ATCACACAGATTGAGTCTGTGTTCCCCAGGGTGTGCCGTTACCTGATTTTTAAGTGAGCCAGGGCGGACAGCAGCTTTTCTGATTTACAG AGTTCTTCAGATTTACAAATGGACAATGACATCACAGTTTTTAGCACTGAAGCCAGTCTCATGCTAGTAACAGTGGGTGAGCCGCTCGAG GGACTGGGTTCTAATGAATACTGGTATGAACGGGGAGTCTCTGCAGTCGCCAGACAAATCATACTCAGCCCCTTCCCCCGTAGAGCAACA AGTGGTTCTTTTAGAGTTGACTGGCAGCATTTCCTGTCGGGGGAGGTGGGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTGTACATTCTC TCCTGGGCTGTTACTTTCTGTAGACGCACAAAATCAGCCCCAATGTTTTTAAGGGCATCTTAGCCAAGGAAGCTGGCTTTTGTGTCGCCA CTTCCAGGCCTGCATTAAGAGAGAGCCCAGGCACCAGGGCTACCACTGGAACCTGCCTCAGCGTCAACTGCTGCTGGTCTGTAGCCAGGC CCAGCCTTTGAGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCCAGCCCTGAGCTGCTCCTGGCTCAGCTGCCCAGAGCCTGCAGCCT GGGGAGGTACTCAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGTCCTGGCTGGCTGCTG CCAATGAGGTGGACACCAGTGTGGTTTGGGGTGCACTGGCCACTTCTTGCTGGGTTCTGATTTTCTTGGAAGTGCATCTGCCTTCCTTAT CCAATAGTTTTATCCCTGCATTGCTCTTGTGAAGTGGCTGGTTTGGTTCTGTATGTAGCATTTTGTACCTTTCCTCTGGCAAAACACTGT CAGTTTATAAACATTTTTTATATTTCCCTCCTTTAAAAACAGCTTGTGTATTTCTGCTATAAAATGTGTCAGCAAAGGCAGAGTGACCTA >In-frame_ENST00000448493_ENST00000397517_TCGA-34-A5IX_DOCK9_chr13_99607689_-_STK24_chr13_99134575_length(amino acids)=468AA_start in transcript=6_stop in transcript=1412 MSRRWYSGSLFRKSQGRGCGNGVEIAKKLNIHTLGMGCTTSVILFKGIRTVFERNCAYMCKQQGENNALEYTAYNWTKEDSELLISSWLA KPKLIEPLDYENVIVQKKTQILNDCLREMLLFPYDDFQDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK NNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWKAEQSHDDSSSEDSDAETDGQASGGSDSG DWIFTIREKDPKNLENGALQPSDLDRNKMKDIPKRPFSQCLSTIISPLFAELKEKSQACGGNLGSIEELRGAIYLAEEACPGISDTMVAQ -------------------------------------------------------------- >In-frame_ENST00000442173_ENST00000397517_TCGA-34-A5IX_DOCK9_chr13_99607689_-_STK24_chr13_99134575_length(transcript)=4413nt_BP=418nt GTCATGCCTTCCCACCCCACAGGCTCTGCAGACCCAGCCAGCGGGGCTGACCACTTGTGCCTGGGAAGCCAGTTTCCTTTCCTTCCTTGG ACCACTGGCATGCCTGTGCCTTGCACGGCCAGGGACTCGCAGCTGTTCCAGTTGCAGACTTTCTGACTTGCGTTTTCAGCCGAGAATGCA GGCTGATAAATGCAGGACAAGTAGTAGAAGTGTCAAAAAGGAACTGGTGATTGAGTCCCCCCTGCAATACAAGGATGCAGCTCAGGGCGA AGTGGAAGCAGAGAGCCCGGGCCCTGTGCCGGCAAAGCCAAAGCTAATTGAGCCACTCGACTATGAAAATGTCATCGTCCAGAAGAAGAC TCAGATCCTGAACGACTGTTTACGGGAGATGCTGCTCTTCCCTTACGATGACTTTCAGGATACAAAATTATGGATAATAATGGAATATCT TGGTGGAGGCTCCGCACTAGATCTATTAGAACCTGGCCCATTAGATGAAACCCAGATCGCTACTATATTAAGAGAAATACTGAAAGGACT CGATTATCTCCATTCGGAGAAGAAAATCCACAGAGACATTAAAGCGGCCAACGTCCTGCTGTCTGAGCATGGCGAGGTGAAGCTGGCGGA CTTTGGCGTGGCTGGCCAGCTGACAGACACCCAGATCAAAAGGAACACCTTCGTGGGCACCCCATTCTGGATGGCACCCGAGGTCATCAA ACAGTCGGCCTATGACTCGAAGGCAGACATCTGGTCCCTGGGCATAACAGCTATTGAACTTGCAAGAGGGGAACCACCTCATTCCGAGCT GCACCCCATGAAAGTTTTATTCCTCATTCCAAAGAACAACCCACCGACGTTGGAAGGAAACTACAGTAAACCCCTCAAGGAGTTTGTGGA GGCCTGTTTGAATAAGGAGCCGAGCTTTAGACCCACTGCTAAGGAGTTATTGAAGCACAAGTTTATACTACGCAATGCAAAGAAAACTTC CTACTTGACCGAGCTCATCGACAGGTACAAGAGATGGAAGGCCGAGCAGAGCCATGACGACTCGAGCTCCGAGGATTCCGACGCGGAAAC AGATGGCCAAGCCTCGGGGGGCAGTGATTCTGGGGACTGGATCTTCACAATCCGAGAAAAAGATCCCAAGAATCTCGAGAATGGAGCTCT TCAGCCATCGGACTTGGACAGAAATAAGATGAAAGACATCCCGAAGAGGCCTTTCTCTCAGTGTTTATCTACAATTATTTCTCCTCTGTT TGCAGAGTTGAAGGAGAAGAGCCAGGCGTGCGGAGGGAACTTGGGGTCCATTGAAGAGCTGCGAGGGGCCATCTACCTAGCGGAGGAGGC GTGCCCTGGCATCTCCGACACCATGGTGGCCCAGCTCGTGCAGCGGCTCCAGAGATACTCTCTAAGTGGTGGAGGAACTTCATCCCACTG AAATTCCTTTGGCATTTGGGGTTTTGTTTTTCCTTTTTTCCTTCTTCATCCTCCTCCTTTTTTAAAAGTCAACGAGAGCCTTCGCTGACT CCACCGAAGAGGTGCGCCACTGGGAGCCACCCCAGCGCCAGGCGCCCGTCCAGGGACACACACAGTCTTCACTGTGCTGCAGCCAGATGA AGTCTCTCAGATGGGTGGGGAGGGTCAGCTCCTTCCAGCGATCATTTTATTTTATTTTATTACTTTTGTTTTTAATTTTAACCATAGTGC ACATATTCCAGGAAAGTGTCTTTAAAAACAAAAACAAACCCTGAAATGTATATTTGGGATTATGATAAGGCAACTAAAGACATGAAACCT CAGGTATCCTGCTTTAAGTTGATAACTCCCTCTGGGAGCTGGAGAATCGCTCTGGTGGATGGGTGTACAGATTTGTATATAATGTCATTT TTACGGAAACCCTTTCGGCGTGCATAAGGAATCACTGTGTACAAACTGGCCAAGTGCTTCTGTAGATAACGTCAGTGGAGTAAATATTCG ACAGGCCATAACTTGAGTCTATTGCCTTGCCTTTATTACATGTACATTTTGAATTCTGTGACCAGTGATTTGGGTTTTATTTTGTATTTG CAGGGTTTGTCATTAATAATTAATGCCCCTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGCCCTAC GCCCCTTTTGGTACACCTAGAGGTTGATTTCCTTTTTCATCGATGGTACTATTTCTTAGTGTTTTAAATTGGAACATATCTTGCCTCATG AAGCTTTAAATTATAATTTTCAGTTTCTCCCCATGAAGCGCTCTCGTCTGACATTTGTTTGGAATCGTGCCACTGCTGGTCTGCGCCAGA TGTACCGTCCTTTCCAATACGATTTTCTGTTGCACCTTGTAGTGGATTCTGCATATCATCTTTCCCACCTAAAAATGTCTGAATGCTTAC ACAAATAAATTTTATAACACGCTTATTTTGCATACTCCTTGAAATGTGACTCTTCAGAGGACAGGGCACCTGCTGTGTATGTGTGGCCGT GCGTGTGTACTCGTGGCTGTGTGTGTGTGATGAGACACTTTGGAAGACTCCAGGGAGAAGTCCCCAGGCCTGGAGCTGCCGAGTGCCCAG GTCAGCGCCCTGGACTGCTTGCGCACTTGCTCACCGAGATGATGCAGTTGGAGGTTGCTGATCTGTGCGATTGCTGTAGCGGTTGCCGGG GACCTTAAGAGTTATTTTGCTTCTCTGGAAGGGGCCTATGCTTGCTAGGCAGGCAGCCAGTGTGTCTGTTTTTCTTGGTTTGCTGTGGGA CCTTGCTTGGCGAGGGGGAAAATCTCTGGGTTTCTGGAGTGGGAGGGTTCGTGCAGCAGCTGTTGACTGGTACATGAAGCATTCTTTTAT GTTTGTTGAAGCTGATGATTGACATCTCCCGTGGGTGTGCCAGTTCTTGTGGAGTTAAGACAGGATTTTTGGAAGCAAGGAAGTTAGTGG GTGAGCTTGGGGATGTAGCTCAGCTATCTGCTGGTCTAGTGGCCTCTAAGCTATAGGGAGGGGACAGAGCCCTGAGCTACAGATGCTTGA GTGGGTTATTGTGTCGGTTTGCTAGTGCAGTCTGGTTTTTAAGCTCTAAAATTGAGGTATTTTATTAGAAGTGGATTTGGGTTGAACTCT TAATTTGTATAAGGGATATATTTTGGTTGGGGAAATAGAACTGAGTTGCTAATTCTTATTGTACTCATTACTCCATACAAGAATGTTATG TTGAATAATAAAATTGGAGAAGATTTCATTTTGTGTTTCCAGGGAGTATTCTGTGTGGGGAACTGTTTCCTTACGTGAGGCCGGCGGCAT AAGTCAAAGATGAGTTTTGTCCTTGCGAATCACACAGATTGAGTCTGTGTTCCCCAGGGTGTGCCGTTACCTGATTTTTAAGTGAGCCAG GGCGGACAGCAGCTTTTCTGATTTACAGAGTTCTTCAGATTTACAAATGGACAATGACATCACAGTTTTTAGCACTGAAGCCAGTCTCAT GCTAGTAACAGTGGGTGAGCCGCTCGAGGGACTGGGTTCTAATGAATACTGGTATGAACGGGGAGTCTCTGCAGTCGCCAGACAAATCAT ACTCAGCCCCTTCCCCCGTAGAGCAACAAGTGGTTCTTTTAGAGTTGACTGGCAGCATTTCCTGTCGGGGGAGGTGGGGTTTGATGGAGT TAGAAAGCTCGCCTCTGTGTACATTCTCTCCTGGGCTGTTACTTTCTGTAGACGCACAAAATCAGCCCCAATGTTTTTAAGGGCATCTTA GCCAAGGAAGCTGGCTTTTGTGTCGCCACTTCCAGGCCTGCATTAAGAGAGAGCCCAGGCACCAGGGCTACCACTGGAACCTGCCTCAGC GTCAACTGCTGCTGGTCTGTAGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCCAGCCCTGAGCTGCTCC TGGCTCAGCTGCCCAGAGCCTGCAGCCTGGGGAGGTACTCAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGT TTTTGAGCTGTGTCCTGGCTGGCTGCTGCCAATGAGGTGGACACCAGTGTGGTTTGGGGTGCACTGGCCACTTCTTGCTGGGTTCTGATT TTCTTGGAAGTGCATCTGCCTTCCTTATCCAATAGTTTTATCCCTGCATTGCTCTTGTGAAGTGGCTGGTTTGGTTCTGTATGTAGCATT TTGTACCTTTCCTCTGGCAAAACACTGTCAGTTTATAAACATTTTTTATATTTCCCTCCTTTAAAAACAGCTTGTGTATTTCTGCTATAA AATGTGTCAGCAAAGGCAGAGTGACCTAATAGGGCATGTTCTTAAGCACAGGGACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAAAC >In-frame_ENST00000442173_ENST00000397517_TCGA-34-A5IX_DOCK9_chr13_99607689_-_STK24_chr13_99134575_length(amino acids)=471AA_start in transcript=25_stop in transcript=1440 MQTQPAGLTTCAWEASFLSFLGPLACLCLARPGTRSCSSCRLSDLRFQPRMQADKCRTSSRSVKKELVIESPLQYKDAAQGEVEAESPGP VPAKPKLIEPLDYENVIVQKKTQILNDCLREMLLFPYDDFQDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFL IPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWKAEQSHDDSSSEDSDAETDGQASGGS DSGDWIFTIREKDPKNLENGALQPSDLDRNKMKDIPKRPFSQCLSTIISPLFAELKEKSQACGGNLGSIEELRGAIYLAEEACPGISDTM -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for DOCK9-STK24 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | DOCK9 | chr13:99607689 | chr13:99134575 | ENST00000339416 | - | 2 | 54 | 1693_2069 | 82.0 | 2094.0 | CDC42 |
Hgene | DOCK9 | chr13:99607689 | chr13:99134575 | ENST00000376460 | - | 2 | 57 | 1693_2069 | 81.0 | 2069.0 | CDC42 |
Hgene | DOCK9 | chr13:99607689 | chr13:99134575 | ENST00000442173 | - | 2 | 33 | 1693_2069 | 81.0 | 1254.0 | CDC42 |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for DOCK9-STK24 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for DOCK9-STK24 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | DOCK9 | C0005586 | Bipolar Disorder | 1 | PSYGENET |