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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:ECE1-ECE1 (FusionGDB2 ID:24828)

Fusion Gene Summary for ECE1-ECE1

check button Fusion gene summary
Fusion gene informationFusion gene name: ECE1-ECE1
Fusion gene ID: 24828
HgeneTgene
Gene symbol

ECE1

ECE1

Gene ID

1889

1889

Gene nameendothelin converting enzyme 1endothelin converting enzyme 1
SynonymsECEECE
Cytomap

1p36.12

1p36.12

Type of geneprotein-codingprotein-coding
Descriptionendothelin-converting enzyme 1ECE-1endothelin-converting enzyme 1ECE-1
Modification date2020031320200313
UniProtAcc.

P42892

Ensembl transtripts involved in fusion geneENST00000415912, ENST00000357071, 
ENST00000374893, ENST00000436918, 
ENST00000264205, ENST00000528294, 
ENST00000415912, ENST00000357071, 
ENST00000374893, ENST00000436918, 
ENST00000264205, ENST00000528294, 
Fusion gene scores* DoF score16 X 15 X 9=216010 X 12 X 6=720
# samples 1814
** MAII scorelog2(18/2160*10)=-3.58496250072116
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(14/720*10)=-2.36257007938471
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: ECE1 [Title/Abstract] AND ECE1 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointECE1(21545462)-ECE1(21544280), # samples:1
ECE1(21545686)-ECE1(21546273), # samples:1
ECE1(21554534)-ECE1(21554454), # samples:1
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneECE1

GO:0010814

substance P catabolic process

18039931

HgeneECE1

GO:0010815

bradykinin catabolic process

18039931

HgeneECE1

GO:0010816

calcitonin catabolic process

18039931

HgeneECE1

GO:0016485

protein processing

7805846

HgeneECE1

GO:0016486

peptide hormone processing

7864876

HgeneECE1

GO:0034959

endothelin maturation

7805846

HgeneECE1

GO:0042447

hormone catabolic process

7864876

TgeneECE1

GO:0010814

substance P catabolic process

18039931

TgeneECE1

GO:0010815

bradykinin catabolic process

18039931

TgeneECE1

GO:0010816

calcitonin catabolic process

18039931

TgeneECE1

GO:0016485

protein processing

7805846

TgeneECE1

GO:0016486

peptide hormone processing

7864876

TgeneECE1

GO:0034959

endothelin maturation

7805846

TgeneECE1

GO:0042447

hormone catabolic process

7864876


check buttonFusion gene breakpoints across ECE1 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonFusion gene breakpoints across ECE1 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChiTaRS5.0N/AAA864426ECE1chr1

21545462

+ECE1chr1

21544280

+
ChiTaRS5.0N/AAI343944ECE1chr1

21545686

-ECE1chr1

21546273

-
ChiTaRS5.0N/ACV397322ECE1chr1

21554534

-ECE1chr1

21554454

+


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Fusion Gene ORF analysis for ECE1-ECE1

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
intron-3UTRENST00000415912ENST00000415912ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000415912ENST00000357071ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000415912ENST00000374893ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000415912ENST00000436918ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000415912ENST00000264205ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000415912ENST00000528294ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-3UTRENST00000357071ENST00000415912ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000357071ENST00000357071ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000357071ENST00000374893ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000357071ENST00000436918ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000357071ENST00000264205ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000357071ENST00000528294ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-3UTRENST00000374893ENST00000415912ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000374893ENST00000357071ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000374893ENST00000374893ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000374893ENST00000436918ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000374893ENST00000264205ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000374893ENST00000528294ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-3UTRENST00000436918ENST00000415912ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000436918ENST00000357071ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000436918ENST00000374893ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000436918ENST00000436918ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000436918ENST00000264205ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000436918ENST00000528294ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-3UTRENST00000264205ENST00000415912ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000264205ENST00000357071ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000264205ENST00000374893ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000264205ENST00000436918ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000264205ENST00000264205ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000264205ENST00000528294ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-3UTRENST00000528294ENST00000415912ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000528294ENST00000357071ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000528294ENST00000374893ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000528294ENST00000436918ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000528294ENST00000264205ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-intronENST00000528294ENST00000528294ECE1chr1

21545462

+ECE1chr1

21544280

+
intron-3UTRENST00000415912ENST00000415912ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-3UTRENST00000415912ENST00000357071ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-intronENST00000415912ENST00000374893ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-intronENST00000415912ENST00000436918ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-intronENST00000415912ENST00000264205ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-intronENST00000415912ENST00000528294ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-3UTRENST00000357071ENST00000415912ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-3UTRENST00000357071ENST00000357071ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-intronENST00000357071ENST00000374893ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-intronENST00000357071ENST00000436918ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-intronENST00000357071ENST00000264205ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-intronENST00000357071ENST00000528294ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-3UTRENST00000374893ENST00000415912ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-3UTRENST00000374893ENST00000357071ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-intronENST00000374893ENST00000374893ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-intronENST00000374893ENST00000436918ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-intronENST00000374893ENST00000264205ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-intronENST00000374893ENST00000528294ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-3UTRENST00000436918ENST00000415912ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-3UTRENST00000436918ENST00000357071ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-intronENST00000436918ENST00000374893ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-intronENST00000436918ENST00000436918ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-intronENST00000436918ENST00000264205ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-intronENST00000436918ENST00000528294ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-3UTRENST00000264205ENST00000415912ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-3UTRENST00000264205ENST00000357071ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-intronENST00000264205ENST00000374893ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-intronENST00000264205ENST00000436918ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-intronENST00000264205ENST00000264205ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-intronENST00000264205ENST00000528294ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-3UTRENST00000528294ENST00000415912ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-3UTRENST00000528294ENST00000357071ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-intronENST00000528294ENST00000374893ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-intronENST00000528294ENST00000436918ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-intronENST00000528294ENST00000264205ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-intronENST00000528294ENST00000528294ECE1chr1

21545686

-ECE1chr1

21546273

-
intron-3CDSENST00000415912ENST00000415912ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000415912ENST00000357071ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000415912ENST00000374893ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000415912ENST00000436918ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000415912ENST00000264205ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-intronENST00000415912ENST00000528294ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000357071ENST00000415912ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000357071ENST00000357071ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000357071ENST00000374893ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000357071ENST00000436918ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000357071ENST00000264205ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-intronENST00000357071ENST00000528294ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000374893ENST00000415912ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000374893ENST00000357071ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000374893ENST00000374893ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000374893ENST00000436918ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000374893ENST00000264205ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-intronENST00000374893ENST00000528294ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000436918ENST00000415912ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000436918ENST00000357071ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000436918ENST00000374893ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000436918ENST00000436918ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000436918ENST00000264205ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-intronENST00000436918ENST00000528294ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000264205ENST00000415912ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000264205ENST00000357071ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000264205ENST00000374893ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000264205ENST00000436918ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000264205ENST00000264205ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-intronENST00000264205ENST00000528294ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000528294ENST00000415912ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000528294ENST00000357071ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000528294ENST00000374893ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000528294ENST00000436918ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-3CDSENST00000528294ENST00000264205ECE1chr1

21554534

-ECE1chr1

21554454

+
intron-intronENST00000528294ENST00000528294ECE1chr1

21554534

-ECE1chr1

21554454

+

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score

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Fusion Genomic Features for ECE1-ECE1


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for ECE1-ECE1


check button Go to

FGviewer for the breakpoints of :-:

.
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.ECE1

P42892

FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.FUNCTION: Converts big endothelin-1 to endothelin-1. {ECO:0000269|PubMed:9396733}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


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Fusion Gene Sequence for ECE1-ECE1


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.

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Fusion Gene PPI Analysis for ECE1-ECE1


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for ECE1-ECE1


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for ECE1-ECE1


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneECE1C0018798Congenital Heart Defects2CTD_human
HgeneECE1C0011860Diabetes Mellitus, Non-Insulin-Dependent1CTD_human
HgeneECE1C0019569Hirschsprung Disease1CTD_human
HgeneECE1C0020538Hypertensive disease1CTD_human
HgeneECE1C0085758Aganglionosis, Colonic1CTD_human
HgeneECE1C0376634Craniofacial Abnormalities1CTD_human
HgeneECE1C0393912Segmental Autonomic Dysfunction1CTD_human
HgeneECE1C0750944Peripheral Autonomic Nervous System Diseases1CTD_human
HgeneECE1C0750945Nervous System Diseases, Parasympathetic1CTD_human
HgeneECE1C0750946Nervous System Diseases, Sympathetic1CTD_human
HgeneECE1C1145628Autonomic nervous system disorders1CTD_human
HgeneECE1C1257840Aganglionosis, Rectosigmoid Colon1CTD_human
HgeneECE1C3151237Hirschsprung Disease, Cardiac Defects, and Autonomic Dysfunction1CTD_human;GENOMICS_ENGLAND;UNIPROT
HgeneECE1C3661523Congenital Intestinal Aganglionosis1CTD_human
TgeneECE1C0018798Congenital Heart Defects2CTD_human
TgeneECE1C0011860Diabetes Mellitus, Non-Insulin-Dependent1CTD_human
TgeneECE1C0019569Hirschsprung Disease1CTD_human
TgeneECE1C0020538Hypertensive disease1CTD_human
TgeneECE1C0085758Aganglionosis, Colonic1CTD_human
TgeneECE1C0376634Craniofacial Abnormalities1CTD_human
TgeneECE1C0393912Segmental Autonomic Dysfunction1CTD_human
TgeneECE1C0750944Peripheral Autonomic Nervous System Diseases1CTD_human
TgeneECE1C0750945Nervous System Diseases, Parasympathetic1CTD_human
TgeneECE1C0750946Nervous System Diseases, Sympathetic1CTD_human
TgeneECE1C1145628Autonomic nervous system disorders1CTD_human
TgeneECE1C1257840Aganglionosis, Rectosigmoid Colon1CTD_human
TgeneECE1C3151237Hirschsprung Disease, Cardiac Defects, and Autonomic Dysfunction1CTD_human;GENOMICS_ENGLAND;UNIPROT
TgeneECE1C3661523Congenital Intestinal Aganglionosis1CTD_human