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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:EIF3M-UEVLD (FusionGDB2 ID:25892) |
Fusion Gene Summary for EIF3M-UEVLD |
Fusion gene summary |
Fusion gene information | Fusion gene name: EIF3M-UEVLD | Fusion gene ID: 25892 | Hgene | Tgene | Gene symbol | EIF3M | UEVLD | Gene ID | 10480 | 55293 |
Gene name | eukaryotic translation initiation factor 3 subunit M | UEV and lactate/malate dehyrogenase domains | |
Synonyms | B5|GA17|PCID1|TANGO7|hfl-B5 | ATTP|UEV3 | |
Cytomap | 11p13 | 11p15.1 | |
Type of gene | protein-coding | protein-coding | |
Description | eukaryotic translation initiation factor 3 subunit MB5 receptorPCI domain containing 1 (herpesvirus entry mediator)PCI domain-containing protein 1dendritic cell proteinfetal lung protein B5transport and golgi organization 7 homolog | ubiquitin-conjugating enzyme E2 variant 3EV and lactate/malate dehydrogenase domain-containing proteinUEV-3signaling molecule ATTP | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | Q7L2H7 | . | |
Ensembl transtripts involved in fusion gene | ENST00000531120, ENST00000524896, ENST00000532054, | ENST00000396197, ENST00000543987, ENST00000540666, ENST00000535484, ENST00000320750, ENST00000379387, ENST00000541984, ENST00000300038, | |
Fusion gene scores | * DoF score | 9 X 9 X 4=324 | 3 X 3 X 3=27 |
# samples | 10 | 3 | |
** MAII score | log2(10/324*10)=-1.6959938131099 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/27*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: EIF3M [Title/Abstract] AND UEVLD [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | EIF3M(32617593)-UEVLD(18591924), # samples:3 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene breakpoints across EIF3M (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across UEVLD (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | SARC | TCGA-DX-A1KU-01A | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - |
ChimerDB4 | SARC | TCGA-DX-A1KU | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - |
ChimerDB4 | SARC | TCGA-DX-A1KU-01A | EIF3M | chr11 | 32617593 | - | UEVLD | chr11 | 18591924 | - |
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Fusion Gene ORF analysis for EIF3M-UEVLD |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000531120 | ENST00000396197 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - |
In-frame | ENST00000531120 | ENST00000543987 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - |
5CDS-intron | ENST00000531120 | ENST00000540666 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - |
5CDS-intron | ENST00000531120 | ENST00000535484 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - |
5CDS-intron | ENST00000531120 | ENST00000320750 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - |
5CDS-intron | ENST00000531120 | ENST00000379387 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - |
5CDS-intron | ENST00000531120 | ENST00000541984 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - |
5CDS-intron | ENST00000531120 | ENST00000300038 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - |
In-frame | ENST00000524896 | ENST00000396197 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - |
In-frame | ENST00000524896 | ENST00000543987 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - |
5CDS-intron | ENST00000524896 | ENST00000540666 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - |
5CDS-intron | ENST00000524896 | ENST00000535484 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - |
5CDS-intron | ENST00000524896 | ENST00000320750 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - |
5CDS-intron | ENST00000524896 | ENST00000379387 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - |
5CDS-intron | ENST00000524896 | ENST00000541984 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - |
5CDS-intron | ENST00000524896 | ENST00000300038 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - |
intron-3CDS | ENST00000532054 | ENST00000396197 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - |
intron-3CDS | ENST00000532054 | ENST00000543987 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - |
intron-intron | ENST00000532054 | ENST00000540666 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - |
intron-intron | ENST00000532054 | ENST00000535484 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - |
intron-intron | ENST00000532054 | ENST00000320750 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - |
intron-intron | ENST00000532054 | ENST00000379387 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - |
intron-intron | ENST00000532054 | ENST00000541984 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - |
intron-intron | ENST00000532054 | ENST00000300038 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000531120 | EIF3M | chr11 | 32617593 | + | ENST00000396197 | UEVLD | chr11 | 18591924 | - | 4796 | 862 | 63 | 2084 | 673 |
ENST00000531120 | EIF3M | chr11 | 32617593 | + | ENST00000543987 | UEVLD | chr11 | 18591924 | - | 3080 | 862 | 63 | 1808 | 581 |
ENST00000524896 | EIF3M | chr11 | 32617593 | + | ENST00000396197 | UEVLD | chr11 | 18591924 | - | 4391 | 457 | 54 | 1679 | 541 |
ENST00000524896 | EIF3M | chr11 | 32617593 | + | ENST00000543987 | UEVLD | chr11 | 18591924 | - | 2675 | 457 | 54 | 1403 | 449 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000531120 | ENST00000396197 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - | 9.71E-05 | 0.99990296 |
ENST00000531120 | ENST00000543987 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - | 0.000124928 | 0.99987507 |
ENST00000524896 | ENST00000396197 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - | 0.000169616 | 0.99983037 |
ENST00000524896 | ENST00000543987 | EIF3M | chr11 | 32617593 | + | UEVLD | chr11 | 18591924 | - | 0.000185087 | 0.9998149 |
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Fusion Genomic Features for EIF3M-UEVLD |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for EIF3M-UEVLD |
Go to FGviewer for the breakpoints of chr11:32617593-chr11:18591924 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
EIF3M | . |
FUNCTION: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis (PubMed:17403899, PubMed:25849773, PubMed:27462815). The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribosomal complexes and subsequently prevents premature joining of the 40S and 60S ribosomal subunits prior to initiation (PubMed:17403899). The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation, including cell cycling, differentiation and apoptosis, and uses different modes of RNA stem-loop binding to exert either translational activation or repression (PubMed:25849773). {ECO:0000255|HAMAP-Rule:MF_03012, ECO:0000269|PubMed:17403899, ECO:0000269|PubMed:25849773, ECO:0000269|PubMed:27462815}.; FUNCTION: (Microbial infection) May favor virus entry in case of infection with herpes simplex virus 1 (HSV1) or herpes simplex virus 2 (HSV2). {ECO:0000269|PubMed:15919898}. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | UEVLD | chr11:32617593 | chr11:18591924 | ENST00000541984 | 0 | 7 | 2_145 | 0 | 200.0 | Domain | UEV | |
Tgene | UEVLD | chr11:32617593 | chr11:18591924 | ENST00000300038 | 2 | 7 | 191_219 | 64.33333333333333 | 216.0 | Nucleotide binding | NAD | |
Tgene | UEVLD | chr11:32617593 | chr11:18591924 | ENST00000320750 | 1 | 10 | 191_219 | 42.333333333333336 | 358.0 | Nucleotide binding | NAD | |
Tgene | UEVLD | chr11:32617593 | chr11:18591924 | ENST00000379387 | 1 | 11 | 191_219 | 42.333333333333336 | 450.0 | Nucleotide binding | NAD | |
Tgene | UEVLD | chr11:32617593 | chr11:18591924 | ENST00000396197 | 2 | 12 | 191_219 | 64.33333333333333 | 472.0 | Nucleotide binding | NAD | |
Tgene | UEVLD | chr11:32617593 | chr11:18591924 | ENST00000535484 | 2 | 11 | 191_219 | 26.333333333333332 | 342.0 | Nucleotide binding | NAD | |
Tgene | UEVLD | chr11:32617593 | chr11:18591924 | ENST00000541984 | 0 | 7 | 191_219 | 0 | 200.0 | Nucleotide binding | NAD | |
Tgene | UEVLD | chr11:32617593 | chr11:18591924 | ENST00000543987 | 2 | 11 | 191_219 | 64.33333333333333 | 380.0 | Nucleotide binding | NAD |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | EIF3M | chr11:32617593 | chr11:18591924 | ENST00000531120 | + | 8 | 11 | 180_339 | 266.3333333333333 | 375.0 | Domain | PCI |
Tgene | UEVLD | chr11:32617593 | chr11:18591924 | ENST00000300038 | 2 | 7 | 2_145 | 64.33333333333333 | 216.0 | Domain | UEV | |
Tgene | UEVLD | chr11:32617593 | chr11:18591924 | ENST00000320750 | 1 | 10 | 2_145 | 42.333333333333336 | 358.0 | Domain | UEV | |
Tgene | UEVLD | chr11:32617593 | chr11:18591924 | ENST00000379387 | 1 | 11 | 2_145 | 42.333333333333336 | 450.0 | Domain | UEV | |
Tgene | UEVLD | chr11:32617593 | chr11:18591924 | ENST00000396197 | 2 | 12 | 2_145 | 64.33333333333333 | 472.0 | Domain | UEV | |
Tgene | UEVLD | chr11:32617593 | chr11:18591924 | ENST00000535484 | 2 | 11 | 2_145 | 26.333333333333332 | 342.0 | Domain | UEV | |
Tgene | UEVLD | chr11:32617593 | chr11:18591924 | ENST00000543987 | 2 | 11 | 2_145 | 64.33333333333333 | 380.0 | Domain | UEV |
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Fusion Gene Sequence for EIF3M-UEVLD |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000531120_ENST00000396197_TCGA-DX-A1KU-01A_EIF3M_chr11_32617593_+_UEVLD_chr11_18591924_length(transcript)=4796nt_BP=862nt AGTTCCCTTTTCCGGTCGGCGTGGTCTTGCGAGTGGAGTGTCCGCTGTGCCCGGGCCTGCACCATGAGCGTCCCGGCCTTCATCGACATC AGTGAAGAAGATCAGGCTGCTGAGCTTCGTGCTTATCTGAAATCTAAAGGAGCTGAGATTTCAGAAGAGAACTCGGAAGGTGGACTTCAT GTTGATTTAGCTCAAATTATTGAAGCCTGTGATGTGTGTCTGAAGGAGGATGATAAAGATGTTGAAAGTGTGATGAACAGTGTGGTATCC CTACTCTTGATCCTGGAACCAGACAAGCAAGAAGCTTTGATTGAAAGCCTATGTGAAAAGCTGGTCAAATTTCGCGAAGGTGAACGCCCG TCTCTGAGACTGCAGTTGTTAAGCAACCTTTTCCACGGGATGGATAAGAATACTCCTGTAAGATACACAGTGTATTGCAGCCTTATTAAA GTGGCAGCATCTTGTGGGGCCATCCAGTACATCCCAACTGAGCTGGATCAAGTTAGAAAATGGATTTCTGACTGGAATCTCACCACTGAA AAAAAGCACACCCTTTTAAGACTACTTTATGAGGCACTTGTGGATTGTAAGAAGAGTGATGCTGCTTCAAAAGTCATGGTGGAATTGCTC GGAAGTTACACAGAGGACAATGCTTCCCAGGCTCGAGTTGATGCCCACAGGTGTATTGTACGAGCATTGAAAGATCCAAATGCATTTCTT TTTGACCACCTTCTTACTTTAAAACCAGTCAAGTTTTTGGAAGGCGAGCTTATTCATGATCTTTTAACCATTTTTGTGAGTGCTAAATTG GCATCATATGTCAAGTTTTATCAGAATAATAAAGACTTCATTGATTCACTTGGTAATACATATAACATACCAATTCGTTTCTGGATTTTG GATTCTCACCCTTTCGCTCCCCCTATTTGCTTCTTGAAGCCAACTGCAAATATGGGAATCTTAGTCGGAAAACATGTGGATGCTCAAGGC AGAATATATTTGCCCTATCTCCAAAACTGGAGCCATCCTAAATCTGTCATTGTTGGATTAATTAAAGAAATGATTGCCAAGTTTCAAGAG GAACTTCCCATGTATTCTCTATCATCATCTGATGAGGCACGGCAGGTAGACTTGCTAGCCTATATTGCAAAAATCACTGAAGGTGTTTCA GATACAAATTCAAAGAGCTGGGCAAATCATGAGAATAAAACAGTCAATAAAATTACTGTGGTTGGAGGTGGAGAACTCGGTATTGCCTGC ACATTAGCAATTTCAGCAAAGGGTATTGCAGACAGGCTTGTCCTCTTAGACCTCTCAGAAGGGACTAAAGGAGCCACGATGGACCTTGAA ATCTTCAACCTTCCTAATGTGGAGATCAGCAAAGATTTGTCTGCCTCTGCTCATTCCAAGGTGGTGATCTTCACAGTCAACTCTTTGGGT AGTTCTCAGTCGTACCTTGATGTGGTACAGAGCAATGTGGATATGTTCAGAGCCCTTGTCCCAGCTCTGGGACATTATAGTCAACACAGT GTCCTGCTCGTTGCATCTCAACCAGTGGAAATCATGACCTATGTAACATGGAAACTGAGTACATTTCCTGCAAATCGAGTGATCGGAATT GGATGTAATCTGGATTCACAGAGATTACAGTATATTATTACAAATGTTTTGAAGGCACAGACTTCAGGCAAAGAAGTATGGGTTATTGGC GAGCAAGGAGAAGACAAAGTGCTCACATGGAGTGGCCAAGAAGAAGTAGTGAGTCATACCTCTCAAGTGCAGCTGTCCAACAGAGCCATG GAACTGCTAAGAGTAAAAGGTCAAAGATCCTGGTCTGTTGGACTATCAGTAGCTGACATGGTTGACAGTATTGTAAACAATAAGAAGAAA GTGCATTCTGTATCAGCTTTAGCAAAGGGATATTATGATATAAATAGTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGA GTATCTGAAGTTATCAAAACCACACTGAAAGAAGATACAGTTACTGAGAAACTCCAAAGCAGTGCATCCTCAATCCACAGTCTCCAACAA CAGTTAAAACTTTGATTCTCAAATGCAATTTGAGAGGCTGGACTTCTACCTAAAGGGAAAAGTCATTTAATTTTACCTATATATAGGTTT GAGGATTTCTGTATCCTGCTACTTACTTTTACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATGTAAATCCTTAAG GAGTTATACAAGGAGGGGAAAAATTAATTTTATTTGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTC ATCTGCAGTGTGCATCAATTTAAATCATATATCCTAAACTAAAAGCACAATTCATACTTCGGGAATATTTTATAAGTAATATATCTTTAA AAGAAAATTACCCTTTGACTTTTATAATCAACATAAGTTCCAGGCCCAGTATGGATTTACAAAATCTGTGTCAGTTGTACATTCACAGGA TCCACAGCTTAAGTTACTAATGTTTCTTGTGTAAAATCCTGTTGGTAGTAATAGTAAAGCATTGTATTTCCCTTCTTCAAATTAATTACC TACCAAAAAATGGAAAAGAATTTTACATGCACTTTAAAATAGTAAAATGGAAAGTGAATTTTTAAAATATATGCATTAAAAGTTTACTTT AATTTCCAGTGGGACTTCCTTTATGAAATTTTCCATAACCTCTTCCTGGAGTATTACAAGATCTCCAACATCTCATAAACTAATTGTGAT ATTAGTGGAACCATAAGCAAATATATATTTTTAGTGGAAATAGATTATGAATGAAAGCCAAGCACCTTACTTTAAAGCCAAAATATGAGA TTTTCATTAAAAACATTGGTCATAATAGGGAGAGGTTTTTTATTTGTTCTGAGCAAATCCTTTAACCTCTCCTGATGATACAGTTCAGAG TACACACACTTTGGTGATGGATCAAGAGCAATATTTTCTTATGTGAAAGATAGCTTATTATTACTATTGTGACATACAACTAATAGTAAC AGTTAACATCAACACTTCATATATACCAGGCAGCATGATAAGCACTTTATTATTTTACTGAATCCTCACAACAGACCACTGAGGTAGGGA CTATTGCCATCATCATTTTATAAAAGGAAATTGAGGTTTAGTCCTCAAGAAGTCTTGGCTATTAAGGGGCACTTATCCATACAACCTCTA CTTTTTCTAGGCACTAAAAGGGGGAAAAGGCTTAATAGCCAAAATAGTTATCAAAAGACCCTAAAGCTGGGGTCCTGTACACCATGAAAG GATTACTTTCATTCTCATGTAAGGGCATGCTTTTATAAAAAACAAACATGGGCTAGGCGCAGTGACTCACGCCTGTAATCCCAGCACCTT GGGAGGCTGAGGCGGGCAGATCACGAGGTCAGGAGATTGAGATCATCCTGGCTAACATGGTGAAACCCTGTCTCTACTAAAAATACAAAA AGTTAGCCAGGCGTGGTGGCAGGTGCCTGTAGTCCCAGCTACTCGGAAGGCTGAGGCAAGAGAATGGCGTGAACCCGGTAGGTGGAGCTT GCAGTGAGCAGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAGTTTAAAAATTA GCCAGGTGTGGTGATGTGCACCTGTAGTTCCAGCTACTCAGGAGGGTGAGGCAGGAGGATCACTTGAGCCCAGAAGTTCAAGATTGCAAT GAGCTATGATCATGCTACTGCACTCCAGCCTAGGCAACAGAGTGAGACCCTGTCTCTAAAAAAATAAAAATAAAGCAAGCATATAATAGG TTAATCCAGATGGAGTTAGGAGGGTTTATAAGGGCAGACACATCCTAGTAAAGAGGAAATAGGCAAACTAATGCTGTTTTAGTGTAATAA GGAATGCTTATAATGATGAACTTTAGTCATAAAGAAAAGGTGAAATTATATTCAGTAACCCATGTTAGGAAAGCAGAAAACTATTTAATA TGCTTGGAAAGATTCCAACCAGAGTTAACTGAATAAAAACCTTGGACATTTGAAGAGAAAAGCATTTAGTTCTATCTAATTTCAATATGC ACGTGAATTAGTTCATGTTACTCTAACAATGTATTCTTACTGTCCTTTTTTATGAAATAGGAAAGTAAAACTGAAAGAACTATTTCTTGT GTTTTTAAAACTAGCCTTTTCTAATATTTGATATCTAATTAAAGTTAGATAATATGTAATATGCTTTTGAACAATAATCTAACCAGAAAA TATTGTATAATAAATTACCAAGAAATCATTACATTAATTATAAAAGGAACATGTCAATACAACAAATGTTTATTTAACACCTACTGTTAC TCCAAATACTGTGTTAGAATTTGACTATTCGAAGATGAATAATAGTCTTTGCCCTCTGGAAGGCCACAATGTAGAAGTAATTCTCTGTAT CAGATATTTCCTTGAGTGTTAAGTGTATTAGTAATCATGTTGTAAATCCCAGTGTAAGTCAAGAAGCAATATCACCACCACCACCTCCCT ATGATTTTGTGATAATTTGGCATTTTCAATGCTTGTTAACTTTCATGTTTTCATTTTTATGAAATCATGCAGAGCTTGTTATAATTTTTA GTGGGGTTTGGATTAAAATGCTTTTTTGATGTAGCAGAAGATACATTTTTTCCCATTTTACATTGTTTTCCTTAAATATTAAGAATAATG >In-frame_ENST00000531120_ENST00000396197_TCGA-DX-A1KU-01A_EIF3M_chr11_32617593_+_UEVLD_chr11_18591924_length(amino acids)=673AA_start in transcript=63_stop in transcript=2084 MSVPAFIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKEDDKDVESVMNSVVSLLLILEPDKQEALIESLCEKL VKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDA ASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIHDLLTIFVSAKLASYVKFYQNNKDFIDSLGNTY NIPIRFWILDSHPFAPPICFLKPTANMGILVGKHVDAQGRIYLPYLQNWSHPKSVIVGLIKEMIAKFQEELPMYSLSSSDEARQVDLLAY IAKITEGVSDTNSKSWANHENKTVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDLSASAHSKV VIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIMTYVTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLKAQT SGKEVWVIGEQGEDKVLTWSGQEEVVSHTSQVQLSNRAMELLRVKGQRSWSVGLSVADMVDSIVNNKKKVHSVSALAKGYYDINSEVFLS -------------------------------------------------------------- >In-frame_ENST00000531120_ENST00000543987_TCGA-DX-A1KU-01A_EIF3M_chr11_32617593_+_UEVLD_chr11_18591924_length(transcript)=3080nt_BP=862nt AGTTCCCTTTTCCGGTCGGCGTGGTCTTGCGAGTGGAGTGTCCGCTGTGCCCGGGCCTGCACCATGAGCGTCCCGGCCTTCATCGACATC AGTGAAGAAGATCAGGCTGCTGAGCTTCGTGCTTATCTGAAATCTAAAGGAGCTGAGATTTCAGAAGAGAACTCGGAAGGTGGACTTCAT GTTGATTTAGCTCAAATTATTGAAGCCTGTGATGTGTGTCTGAAGGAGGATGATAAAGATGTTGAAAGTGTGATGAACAGTGTGGTATCC CTACTCTTGATCCTGGAACCAGACAAGCAAGAAGCTTTGATTGAAAGCCTATGTGAAAAGCTGGTCAAATTTCGCGAAGGTGAACGCCCG TCTCTGAGACTGCAGTTGTTAAGCAACCTTTTCCACGGGATGGATAAGAATACTCCTGTAAGATACACAGTGTATTGCAGCCTTATTAAA GTGGCAGCATCTTGTGGGGCCATCCAGTACATCCCAACTGAGCTGGATCAAGTTAGAAAATGGATTTCTGACTGGAATCTCACCACTGAA AAAAAGCACACCCTTTTAAGACTACTTTATGAGGCACTTGTGGATTGTAAGAAGAGTGATGCTGCTTCAAAAGTCATGGTGGAATTGCTC GGAAGTTACACAGAGGACAATGCTTCCCAGGCTCGAGTTGATGCCCACAGGTGTATTGTACGAGCATTGAAAGATCCAAATGCATTTCTT TTTGACCACCTTCTTACTTTAAAACCAGTCAAGTTTTTGGAAGGCGAGCTTATTCATGATCTTTTAACCATTTTTGTGAGTGCTAAATTG GCATCATATGTCAAGTTTTATCAGAATAATAAAGACTTCATTGATTCACTTGGTAATACATATAACATACCAATTCGTTTCTGGATTTTG GATTCTCACCCTTTCGCTCCCCCTATTTGCTTCTTGAAGCCAACTGCAAATATGGGAATCTTAGTCGGAAAACATGTGGATGCTCAAGGC AGAATATATTTGCCCTATCTCCAAAACTGGAGCCATCCTAAATCTGTCATTGTTGGATTAATTAAAGAAATGATTGCCAAGTTTCAAGAG GAACTTCCCATGTATTCTCTATCATCATCTGATGAGGCACGGCAGGTAGACTTGCTAGCCTATATTGCAAAAATCACTGAAGGTGTTTCA GATACAAATTCAAAGAGCTGGGCAAATCATGAGAATAAAACAGTCAATAAAATTACTGTGGTTGGAGGTGGAGAACTCGGTATTGCCTGC ACATTAGCAATTTCAGCAAAGGGTATTGCAGACAGGCTTGTCCTCTTAGACCTCTCAGAAGGGACTAAAGGAGCCACGATGGACCTTGAA ATCTTCAACCTTCCTAATGTGGAGATCAGCAAAGATTTGTCTGCCTCTGCTCATTCCAAGGTGGTGATCTTCACAGTCAACTCTTTGGGT AGTTCTCAGTCGTACCTTGATGTGGTACAGAGCAATGTGGATATGTTCAGAGCCCTTGTCCCAGCTCTGGGACATTATAGTCAACACAGT GTCCTGCTCGTTGCATCTCAACCAGTGGAAATCATGACCTATGTAACATGGAAACTGAGTACATTTCCTGCAAATCGAGTGATCGGAATT GGATGTAATCTGGATTCACAGAGATTACAGTATATTATTACAAATGTTTTGAAGGCACAGACTTCAGGCAAAGAAGTATGGGTTATTGGC GAGCAAGGAGAAGACAAAGTGCTCACATGGAGTGGCCAAGAAGAAGTAGTGAGTCATACCTCTCAAGTGCAGCTGTCCAACAGGGATATT ATGATATAAATAGTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTGAAAGAAG ATACAGTTACTGAGAAACTCCAAAGCAGTGCATCCTCAATCCACAGTCTCCAACAACAGTTAAAACTTTGATTCTCAAATGCAATTTGAG AGGCTGGACTTCTACCTAAAGGGAAAAGTCATTTAATTTTACCTATATATAGGTTTGAGGATTTCTGTATCCTGCTACTTACTTTTACAA ACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATGTAAATCCTTAAGGAGTTATACAAGGAGGGGAAAAATTAATTTTATT TGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGTGCATCAATTTAAATCATATATCC TAAACTAAAAGCACAATTCATACTTCGGGAATATTTTATAAGTAATATATCTTTAAAAGAAAATTACCCTTTGACTTTTATAATCAACAT AAGTTCCAGGCCCAGTATGGATTTACAAAATCTGTGTCAGTTGTACATTCACAGGATCCACAGCTTAAGTTACTAATGTTTCTTGTGTAA AATCCTGTTGGTAGTAATAGTAAAGCATTGTATTTCCCTTCTTCAAATTAATTACCTACCAAAAAATGGAAAAGAATTTTACATGCACTT TAAAATAGTAAAATGGAAAGTGAATTTTTAAAATATATGCATTAAAAGTTTACTTTAATTTCCAGTGGGACTTCCTTTATGAAATTTTCC ATAACCTCTTCCTGGAGTATTACAAGATCTCCAACATCTCATAAACTAATTGTGATATTAGTGGAACCATAAGCAAATATATATTTTTAG TGGAAATAGATTATGAATGAAAGCCAAGCACCTTACTTTAAAGCCAAAATATGAGATTTTCATTAAAAACATTGGTCATAATAGGGAGAG GTTTTTTATTTGTTCTGAGCAAATCCTTTAACCTCTCCTGATGATACAGTTCAGAGTACACACACTTTGGTGATGGATCAAGAGCAATAT TTTCTTATGTGAAAGATAGCTTATTATTACTATTGTGACATACAACTAATAGTAACAGTTAACATCAACACTTCATATATACCAGGCAGC ATGATAAGCACTTTATTATTTTACTGAATCCTCACAACAGACCACTGAGGTAGGGACTATTGCCATCATCATTTTATAAAAGGAAATTGA >In-frame_ENST00000531120_ENST00000543987_TCGA-DX-A1KU-01A_EIF3M_chr11_32617593_+_UEVLD_chr11_18591924_length(amino acids)=581AA_start in transcript=63_stop in transcript=1808 MSVPAFIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKEDDKDVESVMNSVVSLLLILEPDKQEALIESLCEKL VKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDA ASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIHDLLTIFVSAKLASYVKFYQNNKDFIDSLGNTY NIPIRFWILDSHPFAPPICFLKPTANMGILVGKHVDAQGRIYLPYLQNWSHPKSVIVGLIKEMIAKFQEELPMYSLSSSDEARQVDLLAY IAKITEGVSDTNSKSWANHENKTVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDLSASAHSKV VIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIMTYVTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLKAQT -------------------------------------------------------------- >In-frame_ENST00000524896_ENST00000396197_TCGA-DX-A1KU-01A_EIF3M_chr11_32617593_+_UEVLD_chr11_18591924_length(transcript)=4391nt_BP=457nt TTCCGGTCGGCGTGGTCTTGCGAGTGGAGTGTCCGCTGTGCCCGGGCCTGCACCATGAGCGTCCCGGCCTTCATCGACATCAGTGAAGAA GATCAGGTTAGAAAATGGATTTCTGACTGGAATCTCACCACTGAAAAAAAGCACACCCTTTTAAGACTACTTTATGAGGCACTTGTGGAT TGTAAGAAGAGTGATGCTGCTTCAAAAGTCATGGTGGAATTGCTCGGAAGTTACACAGAGGACAATGCTTCCCAGGCTCGAGTTGATGCC CACAGGTGTATTGTACGAGCATTGAAAGATCCAAATGCATTTCTTTTTGACCACCTTCTTACTTTAAAACCAGTCAAGTTTTTGGAAGGC GAGCTTATTCATGATCTTTTAACCATTTTTGTGAGTGCTAAATTGGCATCATATGTCAAGTTTTATCAGAATAATAAAGACTTCATTGAT TCACTTGGTAATACATATAACATACCAATTCGTTTCTGGATTTTGGATTCTCACCCTTTCGCTCCCCCTATTTGCTTCTTGAAGCCAACT GCAAATATGGGAATCTTAGTCGGAAAACATGTGGATGCTCAAGGCAGAATATATTTGCCCTATCTCCAAAACTGGAGCCATCCTAAATCT GTCATTGTTGGATTAATTAAAGAAATGATTGCCAAGTTTCAAGAGGAACTTCCCATGTATTCTCTATCATCATCTGATGAGGCACGGCAG GTAGACTTGCTAGCCTATATTGCAAAAATCACTGAAGGTGTTTCAGATACAAATTCAAAGAGCTGGGCAAATCATGAGAATAAAACAGTC AATAAAATTACTGTGGTTGGAGGTGGAGAACTCGGTATTGCCTGCACATTAGCAATTTCAGCAAAGGGTATTGCAGACAGGCTTGTCCTC TTAGACCTCTCAGAAGGGACTAAAGGAGCCACGATGGACCTTGAAATCTTCAACCTTCCTAATGTGGAGATCAGCAAAGATTTGTCTGCC TCTGCTCATTCCAAGGTGGTGATCTTCACAGTCAACTCTTTGGGTAGTTCTCAGTCGTACCTTGATGTGGTACAGAGCAATGTGGATATG TTCAGAGCCCTTGTCCCAGCTCTGGGACATTATAGTCAACACAGTGTCCTGCTCGTTGCATCTCAACCAGTGGAAATCATGACCTATGTA ACATGGAAACTGAGTACATTTCCTGCAAATCGAGTGATCGGAATTGGATGTAATCTGGATTCACAGAGATTACAGTATATTATTACAAAT GTTTTGAAGGCACAGACTTCAGGCAAAGAAGTATGGGTTATTGGCGAGCAAGGAGAAGACAAAGTGCTCACATGGAGTGGCCAAGAAGAA GTAGTGAGTCATACCTCTCAAGTGCAGCTGTCCAACAGAGCCATGGAACTGCTAAGAGTAAAAGGTCAAAGATCCTGGTCTGTTGGACTA TCAGTAGCTGACATGGTTGACAGTATTGTAAACAATAAGAAGAAAGTGCATTCTGTATCAGCTTTAGCAAAGGGATATTATGATATAAAT AGTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTGGAACCAATGGAGTATCTGAAGTTATCAAAACCACACTGAAAGAAGATACAGTTACT GAGAAACTCCAAAGCAGTGCATCCTCAATCCACAGTCTCCAACAACAGTTAAAACTTTGATTCTCAAATGCAATTTGAGAGGCTGGACTT CTACCTAAAGGGAAAAGTCATTTAATTTTACCTATATATAGGTTTGAGGATTTCTGTATCCTGCTACTTACTTTTACAAACTGCTTGGTT AAAGTAGAGGGTTTCTTGATTAGCTTTGTGATGTAAATCCTTAAGGAGTTATACAAGGAGGGGAAAAATTAATTTTATTTGGGGTTCTTG AGATATCTATGCTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGTGCATCAATTTAAATCATATATCCTAAACTAAAAG CACAATTCATACTTCGGGAATATTTTATAAGTAATATATCTTTAAAAGAAAATTACCCTTTGACTTTTATAATCAACATAAGTTCCAGGC CCAGTATGGATTTACAAAATCTGTGTCAGTTGTACATTCACAGGATCCACAGCTTAAGTTACTAATGTTTCTTGTGTAAAATCCTGTTGG TAGTAATAGTAAAGCATTGTATTTCCCTTCTTCAAATTAATTACCTACCAAAAAATGGAAAAGAATTTTACATGCACTTTAAAATAGTAA AATGGAAAGTGAATTTTTAAAATATATGCATTAAAAGTTTACTTTAATTTCCAGTGGGACTTCCTTTATGAAATTTTCCATAACCTCTTC CTGGAGTATTACAAGATCTCCAACATCTCATAAACTAATTGTGATATTAGTGGAACCATAAGCAAATATATATTTTTAGTGGAAATAGAT TATGAATGAAAGCCAAGCACCTTACTTTAAAGCCAAAATATGAGATTTTCATTAAAAACATTGGTCATAATAGGGAGAGGTTTTTTATTT GTTCTGAGCAAATCCTTTAACCTCTCCTGATGATACAGTTCAGAGTACACACACTTTGGTGATGGATCAAGAGCAATATTTTCTTATGTG AAAGATAGCTTATTATTACTATTGTGACATACAACTAATAGTAACAGTTAACATCAACACTTCATATATACCAGGCAGCATGATAAGCAC TTTATTATTTTACTGAATCCTCACAACAGACCACTGAGGTAGGGACTATTGCCATCATCATTTTATAAAAGGAAATTGAGGTTTAGTCCT CAAGAAGTCTTGGCTATTAAGGGGCACTTATCCATACAACCTCTACTTTTTCTAGGCACTAAAAGGGGGAAAAGGCTTAATAGCCAAAAT AGTTATCAAAAGACCCTAAAGCTGGGGTCCTGTACACCATGAAAGGATTACTTTCATTCTCATGTAAGGGCATGCTTTTATAAAAAACAA ACATGGGCTAGGCGCAGTGACTCACGCCTGTAATCCCAGCACCTTGGGAGGCTGAGGCGGGCAGATCACGAGGTCAGGAGATTGAGATCA TCCTGGCTAACATGGTGAAACCCTGTCTCTACTAAAAATACAAAAAGTTAGCCAGGCGTGGTGGCAGGTGCCTGTAGTCCCAGCTACTCG GAAGGCTGAGGCAAGAGAATGGCGTGAACCCGGTAGGTGGAGCTTGCAGTGAGCAGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAG AGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAGTTTAAAAATTAGCCAGGTGTGGTGATGTGCACCTGTAGTTCCAGCTACTCAGGAGG GTGAGGCAGGAGGATCACTTGAGCCCAGAAGTTCAAGATTGCAATGAGCTATGATCATGCTACTGCACTCCAGCCTAGGCAACAGAGTGA GACCCTGTCTCTAAAAAAATAAAAATAAAGCAAGCATATAATAGGTTAATCCAGATGGAGTTAGGAGGGTTTATAAGGGCAGACACATCC TAGTAAAGAGGAAATAGGCAAACTAATGCTGTTTTAGTGTAATAAGGAATGCTTATAATGATGAACTTTAGTCATAAAGAAAAGGTGAAA TTATATTCAGTAACCCATGTTAGGAAAGCAGAAAACTATTTAATATGCTTGGAAAGATTCCAACCAGAGTTAACTGAATAAAAACCTTGG ACATTTGAAGAGAAAAGCATTTAGTTCTATCTAATTTCAATATGCACGTGAATTAGTTCATGTTACTCTAACAATGTATTCTTACTGTCC TTTTTTATGAAATAGGAAAGTAAAACTGAAAGAACTATTTCTTGTGTTTTTAAAACTAGCCTTTTCTAATATTTGATATCTAATTAAAGT TAGATAATATGTAATATGCTTTTGAACAATAATCTAACCAGAAAATATTGTATAATAAATTACCAAGAAATCATTACATTAATTATAAAA GGAACATGTCAATACAACAAATGTTTATTTAACACCTACTGTTACTCCAAATACTGTGTTAGAATTTGACTATTCGAAGATGAATAATAG TCTTTGCCCTCTGGAAGGCCACAATGTAGAAGTAATTCTCTGTATCAGATATTTCCTTGAGTGTTAAGTGTATTAGTAATCATGTTGTAA ATCCCAGTGTAAGTCAAGAAGCAATATCACCACCACCACCTCCCTATGATTTTGTGATAATTTGGCATTTTCAATGCTTGTTAACTTTCA TGTTTTCATTTTTATGAAATCATGCAGAGCTTGTTATAATTTTTAGTGGGGTTTGGATTAAAATGCTTTTTTGATGTAGCAGAAGATACA >In-frame_ENST00000524896_ENST00000396197_TCGA-DX-A1KU-01A_EIF3M_chr11_32617593_+_UEVLD_chr11_18591924_length(amino acids)=541AA_start in transcript=54_stop in transcript=1679 MSVPAFIDISEEDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDH LLTLKPVKFLEGELIHDLLTIFVSAKLASYVKFYQNNKDFIDSLGNTYNIPIRFWILDSHPFAPPICFLKPTANMGILVGKHVDAQGRIY LPYLQNWSHPKSVIVGLIKEMIAKFQEELPMYSLSSSDEARQVDLLAYIAKITEGVSDTNSKSWANHENKTVNKITVVGGGELGIACTLA ISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDLSASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLL VASQPVEIMTYVTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLKAQTSGKEVWVIGEQGEDKVLTWSGQEEVVSHTSQVQLSNRAMELL RVKGQRSWSVGLSVADMVDSIVNNKKKVHSVSALAKGYYDINSEVFLSLPCILGTNGVSEVIKTTLKEDTVTEKLQSSASSIHSLQQQLK -------------------------------------------------------------- >In-frame_ENST00000524896_ENST00000543987_TCGA-DX-A1KU-01A_EIF3M_chr11_32617593_+_UEVLD_chr11_18591924_length(transcript)=2675nt_BP=457nt TTCCGGTCGGCGTGGTCTTGCGAGTGGAGTGTCCGCTGTGCCCGGGCCTGCACCATGAGCGTCCCGGCCTTCATCGACATCAGTGAAGAA GATCAGGTTAGAAAATGGATTTCTGACTGGAATCTCACCACTGAAAAAAAGCACACCCTTTTAAGACTACTTTATGAGGCACTTGTGGAT TGTAAGAAGAGTGATGCTGCTTCAAAAGTCATGGTGGAATTGCTCGGAAGTTACACAGAGGACAATGCTTCCCAGGCTCGAGTTGATGCC CACAGGTGTATTGTACGAGCATTGAAAGATCCAAATGCATTTCTTTTTGACCACCTTCTTACTTTAAAACCAGTCAAGTTTTTGGAAGGC GAGCTTATTCATGATCTTTTAACCATTTTTGTGAGTGCTAAATTGGCATCATATGTCAAGTTTTATCAGAATAATAAAGACTTCATTGAT TCACTTGGTAATACATATAACATACCAATTCGTTTCTGGATTTTGGATTCTCACCCTTTCGCTCCCCCTATTTGCTTCTTGAAGCCAACT GCAAATATGGGAATCTTAGTCGGAAAACATGTGGATGCTCAAGGCAGAATATATTTGCCCTATCTCCAAAACTGGAGCCATCCTAAATCT GTCATTGTTGGATTAATTAAAGAAATGATTGCCAAGTTTCAAGAGGAACTTCCCATGTATTCTCTATCATCATCTGATGAGGCACGGCAG GTAGACTTGCTAGCCTATATTGCAAAAATCACTGAAGGTGTTTCAGATACAAATTCAAAGAGCTGGGCAAATCATGAGAATAAAACAGTC AATAAAATTACTGTGGTTGGAGGTGGAGAACTCGGTATTGCCTGCACATTAGCAATTTCAGCAAAGGGTATTGCAGACAGGCTTGTCCTC TTAGACCTCTCAGAAGGGACTAAAGGAGCCACGATGGACCTTGAAATCTTCAACCTTCCTAATGTGGAGATCAGCAAAGATTTGTCTGCC TCTGCTCATTCCAAGGTGGTGATCTTCACAGTCAACTCTTTGGGTAGTTCTCAGTCGTACCTTGATGTGGTACAGAGCAATGTGGATATG TTCAGAGCCCTTGTCCCAGCTCTGGGACATTATAGTCAACACAGTGTCCTGCTCGTTGCATCTCAACCAGTGGAAATCATGACCTATGTA ACATGGAAACTGAGTACATTTCCTGCAAATCGAGTGATCGGAATTGGATGTAATCTGGATTCACAGAGATTACAGTATATTATTACAAAT GTTTTGAAGGCACAGACTTCAGGCAAAGAAGTATGGGTTATTGGCGAGCAAGGAGAAGACAAAGTGCTCACATGGAGTGGCCAAGAAGAA GTAGTGAGTCATACCTCTCAAGTGCAGCTGTCCAACAGGGATATTATGATATAAATAGTGAAGTGTTTTTAAGTTTGCCTTGCATCCTTG GAACCAATGGAGTATCTGAAGTTATCAAAACCACACTGAAAGAAGATACAGTTACTGAGAAACTCCAAAGCAGTGCATCCTCAATCCACA GTCTCCAACAACAGTTAAAACTTTGATTCTCAAATGCAATTTGAGAGGCTGGACTTCTACCTAAAGGGAAAAGTCATTTAATTTTACCTA TATATAGGTTTGAGGATTTCTGTATCCTGCTACTTACTTTTACAAACTGCTTGGTTAAAGTAGAGGGTTTCTTGATTAGCTTTGTGATGT AAATCCTTAAGGAGTTATACAAGGAGGGGAAAAATTAATTTTATTTGGGGTTCTTGAGATATCTATGCTGTTCTTTAAATCTACAGCAGG GGTAAACATTCATCTGCAGTGTGCATCAATTTAAATCATATATCCTAAACTAAAAGCACAATTCATACTTCGGGAATATTTTATAAGTAA TATATCTTTAAAAGAAAATTACCCTTTGACTTTTATAATCAACATAAGTTCCAGGCCCAGTATGGATTTACAAAATCTGTGTCAGTTGTA CATTCACAGGATCCACAGCTTAAGTTACTAATGTTTCTTGTGTAAAATCCTGTTGGTAGTAATAGTAAAGCATTGTATTTCCCTTCTTCA AATTAATTACCTACCAAAAAATGGAAAAGAATTTTACATGCACTTTAAAATAGTAAAATGGAAAGTGAATTTTTAAAATATATGCATTAA AAGTTTACTTTAATTTCCAGTGGGACTTCCTTTATGAAATTTTCCATAACCTCTTCCTGGAGTATTACAAGATCTCCAACATCTCATAAA CTAATTGTGATATTAGTGGAACCATAAGCAAATATATATTTTTAGTGGAAATAGATTATGAATGAAAGCCAAGCACCTTACTTTAAAGCC AAAATATGAGATTTTCATTAAAAACATTGGTCATAATAGGGAGAGGTTTTTTATTTGTTCTGAGCAAATCCTTTAACCTCTCCTGATGAT ACAGTTCAGAGTACACACACTTTGGTGATGGATCAAGAGCAATATTTTCTTATGTGAAAGATAGCTTATTATTACTATTGTGACATACAA CTAATAGTAACAGTTAACATCAACACTTCATATATACCAGGCAGCATGATAAGCACTTTATTATTTTACTGAATCCTCACAACAGACCAC >In-frame_ENST00000524896_ENST00000543987_TCGA-DX-A1KU-01A_EIF3M_chr11_32617593_+_UEVLD_chr11_18591924_length(amino acids)=449AA_start in transcript=54_stop in transcript=1403 MSVPAFIDISEEDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDH LLTLKPVKFLEGELIHDLLTIFVSAKLASYVKFYQNNKDFIDSLGNTYNIPIRFWILDSHPFAPPICFLKPTANMGILVGKHVDAQGRIY LPYLQNWSHPKSVIVGLIKEMIAKFQEELPMYSLSSSDEARQVDLLAYIAKITEGVSDTNSKSWANHENKTVNKITVVGGGELGIACTLA ISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDLSASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLL -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for EIF3M-UEVLD |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | EIF3M | chr11:32617593 | chr11:18591924 | ENST00000531120 | + | 8 | 11 | 344_374 | 266.3333333333333 | 375.0 | HSV-1 and HSV-2 |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for EIF3M-UEVLD |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for EIF3M-UEVLD |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |