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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:EPS15-CCDC18 (FusionGDB2 ID:27020) |
Fusion Gene Summary for EPS15-CCDC18 |
Fusion gene summary |
Fusion gene information | Fusion gene name: EPS15-CCDC18 | Fusion gene ID: 27020 | Hgene | Tgene | Gene symbol | EPS15 | CCDC18 | Gene ID | 2060 | 343099 |
Gene name | epidermal growth factor receptor pathway substrate 15 | coiled-coil domain containing 18 | |
Synonyms | AF-1P|AF1P|MLLT5 | NY-SAR-41 | |
Cytomap | 1p32.3 | 1p22.1 | |
Type of gene | protein-coding | protein-coding | |
Description | epidermal growth factor receptor substrate 15ALL1 fused gene from chromosome 1protein AF-1p | coiled-coil domain-containing protein 18sarcoma antigen NY-SAR-24sarcoma antigen NY-SAR-41 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | P42566 | A1A4V9 | |
Ensembl transtripts involved in fusion gene | ENST00000371730, ENST00000371733, ENST00000396122, ENST00000493793, | ENST00000343253, ENST00000401026, ENST00000338949, ENST00000334652, ENST00000557479, ENST00000421014, | |
Fusion gene scores | * DoF score | 17 X 13 X 11=2431 | 7 X 12 X 5=420 |
# samples | 17 | 11 | |
** MAII score | log2(17/2431*10)=-3.83794324189103 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(11/420*10)=-1.93288580414146 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: EPS15 [Title/Abstract] AND CCDC18 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | EPS15(51934145)-CCDC18(93680303), # samples:1 EPS15(51934145)-CCDC18(93676359), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | EPS15-CCDC18 seems lost the major protein functional domain in Hgene partner, which is a CGC due to the frame-shifted ORF. EPS15-CCDC18 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | EPS15 | GO:0048268 | clathrin coat assembly | 12807910 |
Fusion gene breakpoints across EPS15 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across CCDC18 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | BLCA | TCGA-UY-A78N-01A | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93680303 | + |
ChimerDB4 | BLCA | TCGA-UY-A78N-01A | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + |
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Fusion Gene ORF analysis for EPS15-CCDC18 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000371730 | ENST00000343253 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93680303 | + |
Frame-shift | ENST00000371730 | ENST00000401026 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93680303 | + |
Frame-shift | ENST00000371730 | ENST00000338949 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93680303 | + |
5CDS-5UTR | ENST00000371730 | ENST00000334652 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93680303 | + |
5CDS-5UTR | ENST00000371730 | ENST00000557479 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93680303 | + |
5CDS-intron | ENST00000371730 | ENST00000421014 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93680303 | + |
Frame-shift | ENST00000371733 | ENST00000343253 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93680303 | + |
Frame-shift | ENST00000371733 | ENST00000401026 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93680303 | + |
Frame-shift | ENST00000371733 | ENST00000338949 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93680303 | + |
5CDS-5UTR | ENST00000371733 | ENST00000334652 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93680303 | + |
5CDS-5UTR | ENST00000371733 | ENST00000557479 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93680303 | + |
5CDS-intron | ENST00000371733 | ENST00000421014 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93680303 | + |
intron-3CDS | ENST00000396122 | ENST00000343253 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93680303 | + |
intron-3CDS | ENST00000396122 | ENST00000401026 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93680303 | + |
intron-3CDS | ENST00000396122 | ENST00000338949 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93680303 | + |
intron-5UTR | ENST00000396122 | ENST00000334652 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93680303 | + |
intron-5UTR | ENST00000396122 | ENST00000557479 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93680303 | + |
intron-intron | ENST00000396122 | ENST00000421014 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93680303 | + |
intron-3CDS | ENST00000493793 | ENST00000343253 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93680303 | + |
intron-3CDS | ENST00000493793 | ENST00000401026 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93680303 | + |
intron-3CDS | ENST00000493793 | ENST00000338949 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93680303 | + |
intron-5UTR | ENST00000493793 | ENST00000334652 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93680303 | + |
intron-5UTR | ENST00000493793 | ENST00000557479 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93680303 | + |
intron-intron | ENST00000493793 | ENST00000421014 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93680303 | + |
In-frame | ENST00000371730 | ENST00000343253 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + |
In-frame | ENST00000371730 | ENST00000401026 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + |
In-frame | ENST00000371730 | ENST00000338949 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + |
5CDS-5UTR | ENST00000371730 | ENST00000334652 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + |
5CDS-5UTR | ENST00000371730 | ENST00000557479 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + |
5CDS-intron | ENST00000371730 | ENST00000421014 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + |
In-frame | ENST00000371733 | ENST00000343253 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + |
In-frame | ENST00000371733 | ENST00000401026 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + |
In-frame | ENST00000371733 | ENST00000338949 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + |
5CDS-5UTR | ENST00000371733 | ENST00000334652 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + |
5CDS-5UTR | ENST00000371733 | ENST00000557479 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + |
5CDS-intron | ENST00000371733 | ENST00000421014 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + |
intron-3CDS | ENST00000396122 | ENST00000343253 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + |
intron-3CDS | ENST00000396122 | ENST00000401026 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + |
intron-3CDS | ENST00000396122 | ENST00000338949 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + |
intron-5UTR | ENST00000396122 | ENST00000334652 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + |
intron-5UTR | ENST00000396122 | ENST00000557479 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + |
intron-intron | ENST00000396122 | ENST00000421014 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + |
intron-3CDS | ENST00000493793 | ENST00000343253 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + |
intron-3CDS | ENST00000493793 | ENST00000401026 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + |
intron-3CDS | ENST00000493793 | ENST00000338949 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + |
intron-5UTR | ENST00000493793 | ENST00000334652 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + |
intron-5UTR | ENST00000493793 | ENST00000557479 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + |
intron-intron | ENST00000493793 | ENST00000421014 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000371730 | EPS15 | chr1 | 51934145 | - | ENST00000343253 | CCDC18 | chr1 | 93676359 | + | 3475 | 319 | 10 | 3474 | 1155 |
ENST00000371730 | EPS15 | chr1 | 51934145 | - | ENST00000401026 | CCDC18 | chr1 | 93676359 | + | 3140 | 319 | 10 | 3009 | 999 |
ENST00000371730 | EPS15 | chr1 | 51934145 | - | ENST00000338949 | CCDC18 | chr1 | 93676359 | + | 3114 | 319 | 10 | 2877 | 955 |
ENST00000371733 | EPS15 | chr1 | 51934145 | - | ENST00000343253 | CCDC18 | chr1 | 93676359 | + | 3562 | 406 | 13 | 3561 | 1183 |
ENST00000371733 | EPS15 | chr1 | 51934145 | - | ENST00000401026 | CCDC18 | chr1 | 93676359 | + | 3227 | 406 | 13 | 3096 | 1027 |
ENST00000371733 | EPS15 | chr1 | 51934145 | - | ENST00000338949 | CCDC18 | chr1 | 93676359 | + | 3201 | 406 | 13 | 2964 | 983 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000371730 | ENST00000343253 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + | 0.003513289 | 0.99648666 |
ENST00000371730 | ENST00000401026 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + | 0.004617968 | 0.995382 |
ENST00000371730 | ENST00000338949 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + | 0.00471856 | 0.9952814 |
ENST00000371733 | ENST00000343253 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + | 0.003420083 | 0.99657995 |
ENST00000371733 | ENST00000401026 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + | 0.004395743 | 0.9956043 |
ENST00000371733 | ENST00000338949 | EPS15 | chr1 | 51934145 | - | CCDC18 | chr1 | 93676359 | + | 0.004188365 | 0.9958117 |
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Fusion Genomic Features for EPS15-CCDC18 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
EPS15 | chr1 | 51934144 | - | CCDC18 | chr1 | 93680299 | + | 3.64E-05 | 0.99996364 |
EPS15 | chr1 | 51934144 | - | CCDC18 | chr1 | 93676358 | + | 1.07E-06 | 0.9999989 |
EPS15 | chr1 | 51934144 | - | CCDC18 | chr1 | 93680299 | + | 3.64E-05 | 0.99996364 |
EPS15 | chr1 | 51934144 | - | CCDC18 | chr1 | 93676358 | + | 1.07E-06 | 0.9999989 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for EPS15-CCDC18 |
Go to FGviewer for the breakpoints of chr1:51934145-chr1:93676359 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
EPS15 | CCDC18 |
FUNCTION: Involved in cell growth regulation. May be involved in the regulation of mitogenic signals and control of cell proliferation. Involved in the internalization of ligand-inducible receptors of the receptor tyrosine kinase (RTK) type, in particular EGFR. Plays a role in the assembly of clathrin-coated pits (CCPs). Acts as a clathrin adapter required for post-Golgi trafficking. Seems to be involved in CCPs maturation including invagination or budding. Involved in endocytosis of integrin beta-1 (ITGB1) and transferrin receptor (TFR); internalization of ITGB1 as DAB2-dependent cargo but not TFR seems to require association with DAB2. {ECO:0000269|PubMed:16903783, ECO:0000269|PubMed:18362181, ECO:0000269|PubMed:19458185, ECO:0000269|PubMed:22648170}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 15_104 | 103.0 | 897.0 | Domain | EH 1 |
Tgene | CCDC18 | chr1:51934145 | chr1:93676359 | ENST00000343253 | 8 | 29 | 438_464 | 403.0 | 1455.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CCDC18 | chr1:51934145 | chr1:93676359 | ENST00000343253 | 8 | 29 | 508_1309 | 403.0 | 1455.0 | Coiled coil | Ontology_term=ECO:0000255 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 173_184 | 103.0 | 897.0 | Calcium binding | Note=1 |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 236_247 | 103.0 | 897.0 | Calcium binding | Note=2 |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 768_850 | 103.0 | 897.0 | Compositional bias | Note=Pro-rich |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 128_216 | 103.0 | 897.0 | Domain | EH 2 |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 160_195 | 103.0 | 897.0 | Domain | EF-hand 1 |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 223_258 | 103.0 | 897.0 | Domain | EF-hand 2 |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 224_314 | 103.0 | 897.0 | Domain | EH 3 |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 851_870 | 103.0 | 897.0 | Domain | UIM 1 |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 877_896 | 103.0 | 897.0 | Domain | UIM 2 |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 768_774 | 103.0 | 897.0 | Motif | Note=SH3-binding |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 599_827 | 103.0 | 897.0 | Region | Note=15 X 3 AA repeats of D-P-F |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 599_601 | 103.0 | 897.0 | Repeat | Note=1 |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 623_625 | 103.0 | 897.0 | Repeat | Note=2 |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 629_631 | 103.0 | 897.0 | Repeat | Note=3 |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 634_636 | 103.0 | 897.0 | Repeat | Note=4 |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 640_642 | 103.0 | 897.0 | Repeat | Note=5 |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 645_647 | 103.0 | 897.0 | Repeat | Note=6 |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 651_653 | 103.0 | 897.0 | Repeat | Note=7 |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 664_666 | 103.0 | 897.0 | Repeat | Note=8 |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 672_674 | 103.0 | 897.0 | Repeat | Note=9 |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 692_694 | 103.0 | 897.0 | Repeat | Note=10 |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 709_711 | 103.0 | 897.0 | Repeat | Note=11 |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 737_739 | 103.0 | 897.0 | Repeat | Note=12 |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 798_800 | 103.0 | 897.0 | Repeat | Note=13 |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 804_806 | 103.0 | 897.0 | Repeat | Note=14 |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 825_827 | 103.0 | 897.0 | Repeat | Note=15 |
Tgene | CCDC18 | chr1:51934145 | chr1:93676359 | ENST00000343253 | 8 | 29 | 107_138 | 403.0 | 1455.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CCDC18 | chr1:51934145 | chr1:93676359 | ENST00000343253 | 8 | 29 | 170_402 | 403.0 | 1455.0 | Coiled coil | Ontology_term=ECO:0000255 |
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Fusion Gene Sequence for EPS15-CCDC18 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000371730_ENST00000343253_TCGA-UY-A78N-01A_EPS15_chr1_51934145_-_CCDC18_chr1_93676359_length(transcript)=3475nt_BP=319nt TGGAAACACCATGGCTGCGGCGGCCCAGCTCTCTCTGACACAGTTATCAAGTGGGAATCCTGTATATGAAAAATACTATAGACAGGTTGA TACAGGCAATACTGGAAGGGTGTTGGCTTCTGATGCTGCTGCTTTCCTGAAAAAATCAGGGCTTCCAGACTTGATACTTGGAAAGATTTG GGATTTAGCCGACACAGATGGCAAAGGTATCCTGAACAAACAAGAATTCTTTGTTGCTTTGCGTCTTGTGGCATGTGCCCAGAATGGATT GGAAGTTTCACTAAGTAGTTTGAACCTGGCTGTTCCTCCACCAAGATTTTTAAAAAGAGAATTATTTGGCTTTAAATCATATCTTTCTAA ATACCAGATGAGTAGCTTCTCAAACAAGGAAGACCGTTGCATTGGCTGCTGTGAGGCAAATAAATTGGTGATTTCGGAATTGAGAATTAA GCTTGCAATAAAAGAGGCAGAAATTCAAAAGCTTCATGCAAACCTGACTGCAAATCAGTTATCTCAGAGTCTTATTACTTGTAATGACAG CCAAGAAAGTAGCAAATTAAGTAGTTTAGAAACAGAACCTGTAAAGCTAGGTGGTCATCAAGTAGAAAGCGTAAAAGATCAAAATCAACA TACTATGAACAAGCAATATGAAAAAGAGAGGCAAAGACTTGTTACTGGAATAGAAGAACTACGTACTAAGCTGATACAAATAGAAGCTGA AAATTCTGATTTGAAGGTTAACATGGCTCACAGAACTAGTCAGTTTCAGCTGATTCAAGAGGAGCTGCTAGAGAAAGCTTCAAACTCCAG CAAACTGGAAAGTGAAATGACAAAGAAATGTTCTCAACTTTTAACTCTTGAGAAACAGCTGGAAGAAAAGATAGTTGCTTATTCCTCTAT TGCTGCAAAAAATGCAGAACTAGAACAGGAGCTTATGGAAAAGAATGAAAAGATAAGGAGTCTAGAAACCAATATTAATACAGAGCATGA GAAAATTTGTTTAGCCTTTGAAAAAGCAAAGAAAATTCACTTGGAACAGCATAAAGAAATGGAAAAGCAGATTGAAAGACTTGAAGCTCA ACTAGAGAAAAAGGACCAACAATTTAAAGAACAAGAAAAGACTATGTCCATGTTGCAACAAGATATAATATGCAAACAACATCATCTTGA ATCACTAGATAGACTCTTGACGGAAAGCAAAGGGGAAATGAAAAAGGAAAATATGAAGAAAGATGAAGCTTTAAAAGCATTACAGAACCA AGTATCTGAAGAAACAATCAAGGTTAGGCAACTAGATTCAGCATTGGAAATTTGTAAGGAAGAACTTGTCTTGCATTTGAATCAATTGGA AGGAAATAAGGAAAAGTTTGAAAAACAGTTAAAGAAGAAATCTGAAGAGGTATATTGTTTACAGAAAGAGCTAAAGATAAAAAATCACAG TCTTCAAGAGACTTCTGAGCAAAACGTTATTCTACAGCATACTCTTCAGCAACAGCAGCAAATGTTACAACAAGAGACAATTAGAAATGG AGAGCTAGAAGATACTCAAACTAAACTTGAAAAACAGGTGTCAAAACTGGAACAAGAACTTCAAAAACAAAGGGAAAGTTCAGCTGAAAA GTTGAGAAAAATGGAGGAGAAATGTGAATCAGCTGCACATGAAGCAGATTTGAAAAGGCAAAAAGTGATTGAGCTTACTGGCACTGCCAG GCAAGTAAAGATTGAGATGGATCAGTACAAAGAAGAGCTGTCTAAAATGGAAAAGGAAATAATGCACCTAAAACGAGATGGAGAAAATAA AGCAATGCACCTCTCTCAATTAGATATGATCTTAGATCAGACAAAGACAGAGCTAGAAAAGAAAACAAATGCTGTAAAGGAGTTAGAAAA GTTACAGCACAGTACTGAAACTGAACTAACAGAAGCCTTGCAAAAACGGGAAGTACTTGAGACTGAACTACAAAATGCTCATGGAGAATT AAAAAGTACTTTAAGACAACTCCAGGAATTGAGAGATGTACTACAGAAGGCTCAATTATCATTAGAGGAAAAATACACTACTATAAAGGA TCTCACAGCTGAACTTAGAGAATGCAAGATGGAGATTGAAGACAAAAAGCAGGAGCTCCTTGAAATGGATCAGGCACTTAAAGAGAGAAA TTGGGAACTAAAGCAAAGAGCAGCTCAGGTTACACATTTGGATATGACTATTCGTGAGCACAGAGGAGAAATGGAACAAAAAATAATTAA ATTAGAAGGTACTCTGGAGAAATCAGAATTGGAACTTAAAGAATGTAACAAACAGATAGAAAGTCTGAATGACAAATTACAAAATGCTAA AGAACAGCTTCGAGAAAAAGAGTTTATAATGCTACAAAATGAACAGGAGATAAGTCAACTGAAAAAAGAAATTGAAAGAACACAACAAAG GATGAAAGAAATGGAGAGTGTTATGAAAGAGCAAGAACAGTACATTGCCACTCAGTACAAGGAGGCCATAGATTTGGGGCAAGAATTGAG GCTGACCCGGGAGCAGGTGCAGAACTCTCATACAGAATTGGCAGAGGCTCGTCATCAGCAAGTCCAAGCACAGAGAGAAATAGAAAGGCT CTCTAGTGAACTGGAGGATATGAAGCAACTCTCTAAAGAGAAAGATGCTCATGGAAACCATTTAGCTGAAGAACTGGGGGCTTCTAAAGT ACGTGAAGCTCATTTAGAAGCAAGAATGCAAGCAGAAATCAAGAAATTGTCAGCAGAAGTAGAATCTCTCAAAGAAGCTTATCATATGGA GATGATTTCACATCAAGAGAACCATGCAAAGTGGAAGATTTCTGCTGACTCTCAAAAGTCTTCTGTTCAGCAACTAAACGAACAGTTAGA GAAGGCAAAATTGGAATTAGAAGAAGCTCAGGATACTGTAAGCAATTTGCATCAACAAGTCCAAGATAGGAATGAAGTAATTGAAGCTGC AAATGAAGCATTACTTACTAAAGAATCAGAATTAACCAGATTACAGGCCAAAATTTCTGGACATGAAAAGGCAGAAGACATCAAGTTTCT GCCAGCCCCATTTACATCTCCAACAGAAATTATGCCTGATGTTCAAGATCCAAAATTTGCTAAATGTTTTCACACATCTTTTTCCAAGTG TACAAAATTACGTCGCTCTATTAGTGCCAGTGATCTTACTTTCAAAATTCATGGTGATGAAGATCTTTCTGAAGAATTACTACAGGACTT AAAGAAAATGCAATTAGAACAGCCTTCAACATTAGAAGAAAGCCATAAGAATCTGACTTACACCCAGCCAGACTCATTTAAACCTCTCAC ATATAACCTAGAAGCTGATAGTTCTGAGAATAATGACTTTAACACGCTTAGTGGGATGCTAAGATACATAAACAAAGAAGTAAGACTATT >In-frame_ENST00000371730_ENST00000343253_TCGA-UY-A78N-01A_EPS15_chr1_51934145_-_CCDC18_chr1_93676359_length(amino acids)=1155AA_start in transcript=10_stop in transcript=3474 MAAAAQLSLTQLSSGNPVYEKYYRQVDTGNTGRVLASDAAAFLKKSGLPDLILGKIWDLADTDGKGILNKQEFFVALRLVACAQNGLEVS LSSLNLAVPPPRFLKRELFGFKSYLSKYQMSSFSNKEDRCIGCCEANKLVISELRIKLAIKEAEIQKLHANLTANQLSQSLITCNDSQES SKLSSLETEPVKLGGHQVESVKDQNQHTMNKQYEKERQRLVTGIEELRTKLIQIEAENSDLKVNMAHRTSQFQLIQEELLEKASNSSKLE SEMTKKCSQLLTLEKQLEEKIVAYSSIAAKNAELEQELMEKNEKIRSLETNINTEHEKICLAFEKAKKIHLEQHKEMEKQIERLEAQLEK KDQQFKEQEKTMSMLQQDIICKQHHLESLDRLLTESKGEMKKENMKKDEALKALQNQVSEETIKVRQLDSALEICKEELVLHLNQLEGNK EKFEKQLKKKSEEVYCLQKELKIKNHSLQETSEQNVILQHTLQQQQQMLQQETIRNGELEDTQTKLEKQVSKLEQELQKQRESSAEKLRK MEEKCESAAHEADLKRQKVIELTGTARQVKIEMDQYKEELSKMEKEIMHLKRDGENKAMHLSQLDMILDQTKTELEKKTNAVKELEKLQH STETELTEALQKREVLETELQNAHGELKSTLRQLQELRDVLQKAQLSLEEKYTTIKDLTAELRECKMEIEDKKQELLEMDQALKERNWEL KQRAAQVTHLDMTIREHRGEMEQKIIKLEGTLEKSELELKECNKQIESLNDKLQNAKEQLREKEFIMLQNEQEISQLKKEIERTQQRMKE MESVMKEQEQYIATQYKEAIDLGQELRLTREQVQNSHTELAEARHQQVQAQREIERLSSELEDMKQLSKEKDAHGNHLAEELGASKVREA HLEARMQAEIKKLSAEVESLKEAYHMEMISHQENHAKWKISADSQKSSVQQLNEQLEKAKLELEEAQDTVSNLHQQVQDRNEVIEAANEA LLTKESELTRLQAKISGHEKAEDIKFLPAPFTSPTEIMPDVQDPKFAKCFHTSFSKCTKLRRSISASDLTFKIHGDEDLSEELLQDLKKM -------------------------------------------------------------- >In-frame_ENST00000371730_ENST00000401026_TCGA-UY-A78N-01A_EPS15_chr1_51934145_-_CCDC18_chr1_93676359_length(transcript)=3140nt_BP=319nt TGGAAACACCATGGCTGCGGCGGCCCAGCTCTCTCTGACACAGTTATCAAGTGGGAATCCTGTATATGAAAAATACTATAGACAGGTTGA TACAGGCAATACTGGAAGGGTGTTGGCTTCTGATGCTGCTGCTTTCCTGAAAAAATCAGGGCTTCCAGACTTGATACTTGGAAAGATTTG GGATTTAGCCGACACAGATGGCAAAGGTATCCTGAACAAACAAGAATTCTTTGTTGCTTTGCGTCTTGTGGCATGTGCCCAGAATGGATT GGAAGTTTCACTAAGTAGTTTGAACCTGGCTGTTCCTCCACCAAGATTTTTAAAAAGAGAATTATTTGGCTTTAAATCATATCTTTCTAA ATACCAGATGAGTAGCTTCTCAAACAAGGAAGACCGTTGCATTGGCTGCTGTGAGGCAAATAAATTGGTGATTTCGGAATTGAGAATTAA GCTTGCAATAAAAGAGGCAGAAATTCAAAAGCTTCATGCAAACCTGACTGCAAATCAGTTATCTCAGAGTCTTATTACTTGTAATGACAG CCAAGAAAGTAGCAAATTAAGTAGTTTAGAAACAGAACCTGTAAAGCTAGGTGGTCATCAAGTAGCAGAAAGCGTAAAAGATCAAAATCA ACATACTATGAACAAGCAATATGAAAAAGAGAGGCAAAGACTTGTTACTGGAATAGAAGAACTACGTACTAAGCTGATACAAATAGAAGC TGAAAATTCTGATTTGAAGGTTAACATGGCTCACAGAACTAGTCAGTTTCAGCTGATTCAAGAGGAGCTGCTAGAGAAAGCTTCAAACTC CAGCAAACTGGAAAGTGAAATGACAAAGAAATGTTCTCAACTTTTAACTCTTGAGAAACAGCTGGAAGAAAAGATAGTTGCTTATTCCTC TATTGCTGCAAAAAATGCAGAACTAGAACAGGAGCTTATGGAAAAGAATGAAAAGATAAGGAGTCTAGAAACCAATATTAATACAGAGCA TGAGAAAATTTGTTTAGCCTTTGAAAAAGCAAAGAAAATTCACTTGGAACAGCATAAAGAAATGGAAAAGCAGATTGAAAGACTTGAAGC TCAACTAGAGAAAAAGGACCAACAATTTAAAGAACAAGAAAAGACTATGTCCATGTTGCAACAAGATATAATATGCAAACAACATCATCT TGAATCACTAGATAGACTCTTGACGGAAAGCAAAGGGGAAATGAAAAAGGAAAATATGAAGAAAGATGAAGCTTTAAAAGCATTACAGAA CCAAGTATCTGAAGAAACAATCAAGGTTAGGCAACTAGATTCAGCATTGGAAATTTGTAAGGAAGAACTTGTCTTGCATTTGAATCAATT GGAAGGAAATAAGGAAAAGTTTGAAAAACAGTTAAAGAAGAAATCTGAAGAGGTATATTGTTTACAGAAAGAGCTAAAGATAAAAAATCA CAGTCTTCAAGAGACTTCTGAGCAAAACGTTATTCTACAGCATACTCTTCAGCAACAGCAGCAAATGTTACAACAAGAGACAATTAGAAA TGGAGAGCTAGAAGATACTCAAACTAAACTTGAAAAACAGGTGTCAAAACTGGAACAAGAACTTCAAAAACAAAGGGAAAGTTCAGCTGA AAAGTTGAGAAAAATGGAGGAGAAATGTGAATCAGCTGCACATGAAGCAGATTTGAAAAGGCAAAAAGTGATTGAGCTTACTGGCACTGC CAGGCAAGTAAAGATTGAGATGGATCAGTACAAAGAAGAGCTGTCTAAAATGGAAAAGGAAATAATGCACCTAAAACGAGATGGAGAAAA TAAAGCAATGCACCTCTCTCAATTAGATATGATCTTAGATCAGACAAAGACAGAGCTAGAAAAGAAAACAAATGCTGTAAAGGAGTTAGA AAAGTTACAGCACAGTACTGAAACTGAACTAACAGAAGCCTTGCAAAAACGGGAAGTACTTGAGACTGAACTACAAAATGCTCATGGAGA ATTAAAAAGTACTTTAAGACAACTCCAGGAATTGAGAGATGTACTACAGAAGGCTCAATTATCATTAGAGGAAAAATACACTACTATAAA GGATCTCACAGCTGAACTTAGAGAATGCAAGATGGAGATTGAAGACAAAAAGCAGGAGCTCCTTGAAATGGATCAGGCACTTAAAGAGAG AAATTGGGAACTAAAGCAAAGAGCAGCTCAGGTTACACATTTGGATATGACTATTCGTGAGCACAGAGGAGAAATGGAACAAAAAATAAT TAAATTAGAAGGTACTCTGGAGAAATCAGAATTGGAACTTAAAGAATGTAACAAACAGATAGAAAGTCTGAATGACAAATTACAAAATGC TAAAGAACAGCTTCGAGAAAAAGAGTTTATAATGCTACAAAATGAACAGGAGATAAGTCAACTGAAAAAAGAAATTGAAAGAACACAACA AAGGATGAAAGAAATGGAGAGTGTTATGAAAGAGCAAGAACAGTACATTGCCACTCAGTACAAGGAGGCCATAGATTTGGGGCAAGAATT GAGGCTGACCCGGGAGCAGGTGCAGAACTCTCATACAGAATTGGCAGAGGCTCGTCATCAGCAAGTCCAAGCACAGAGAGAAATAGAAAG GCTCTCTAGTGAACTGGAGGATATGAAGCAACTCTCTAAAGAGAAAGATGCTCATGGAAACCATTTAGCTGAAGAACTGGGGGCTTCTAA AGTACGTGAAGCTCATTTAGAAGCAAGAATGCAAGCAGAAATCAAGAAATTGTCAGCAGAAGTAGAATCTCTCAAAGAAGCTTATCATAT GGAGATGATTTCACATCAAGAGAACCATGCAAAGTGGAAGATTTCTGCTGACTCTCAAAAGTCTTCTGTTCAGCAACTAAACGAACAGTT AGAGAAGGCAAAATTGGAATTAGAAGAAGCTCAGGATACTGTAAGCAATTTGCATCAACAAGTCCAAGATAGGAATGAAGTAATTGAAGC TGCAAATGAAGCATTACTTACTAAAGGAGAAAATGTGTAATTCAAAGAAGATACTGATGTGTTGAAAAAATGGAATTTTTGGTACTGTGC >In-frame_ENST00000371730_ENST00000401026_TCGA-UY-A78N-01A_EPS15_chr1_51934145_-_CCDC18_chr1_93676359_length(amino acids)=999AA_start in transcript=10_stop in transcript=3009 MAAAAQLSLTQLSSGNPVYEKYYRQVDTGNTGRVLASDAAAFLKKSGLPDLILGKIWDLADTDGKGILNKQEFFVALRLVACAQNGLEVS LSSLNLAVPPPRFLKRELFGFKSYLSKYQMSSFSNKEDRCIGCCEANKLVISELRIKLAIKEAEIQKLHANLTANQLSQSLITCNDSQES SKLSSLETEPVKLGGHQVAESVKDQNQHTMNKQYEKERQRLVTGIEELRTKLIQIEAENSDLKVNMAHRTSQFQLIQEELLEKASNSSKL ESEMTKKCSQLLTLEKQLEEKIVAYSSIAAKNAELEQELMEKNEKIRSLETNINTEHEKICLAFEKAKKIHLEQHKEMEKQIERLEAQLE KKDQQFKEQEKTMSMLQQDIICKQHHLESLDRLLTESKGEMKKENMKKDEALKALQNQVSEETIKVRQLDSALEICKEELVLHLNQLEGN KEKFEKQLKKKSEEVYCLQKELKIKNHSLQETSEQNVILQHTLQQQQQMLQQETIRNGELEDTQTKLEKQVSKLEQELQKQRESSAEKLR KMEEKCESAAHEADLKRQKVIELTGTARQVKIEMDQYKEELSKMEKEIMHLKRDGENKAMHLSQLDMILDQTKTELEKKTNAVKELEKLQ HSTETELTEALQKREVLETELQNAHGELKSTLRQLQELRDVLQKAQLSLEEKYTTIKDLTAELRECKMEIEDKKQELLEMDQALKERNWE LKQRAAQVTHLDMTIREHRGEMEQKIIKLEGTLEKSELELKECNKQIESLNDKLQNAKEQLREKEFIMLQNEQEISQLKKEIERTQQRMK EMESVMKEQEQYIATQYKEAIDLGQELRLTREQVQNSHTELAEARHQQVQAQREIERLSSELEDMKQLSKEKDAHGNHLAEELGASKVRE AHLEARMQAEIKKLSAEVESLKEAYHMEMISHQENHAKWKISADSQKSSVQQLNEQLEKAKLELEEAQDTVSNLHQQVQDRNEVIEAANE -------------------------------------------------------------- >In-frame_ENST00000371730_ENST00000338949_TCGA-UY-A78N-01A_EPS15_chr1_51934145_-_CCDC18_chr1_93676359_length(transcript)=3114nt_BP=319nt TGGAAACACCATGGCTGCGGCGGCCCAGCTCTCTCTGACACAGTTATCAAGTGGGAATCCTGTATATGAAAAATACTATAGACAGGTTGA TACAGGCAATACTGGAAGGGTGTTGGCTTCTGATGCTGCTGCTTTCCTGAAAAAATCAGGGCTTCCAGACTTGATACTTGGAAAGATTTG GGATTTAGCCGACACAGATGGCAAAGGTATCCTGAACAAACAAGAATTCTTTGTTGCTTTGCGTCTTGTGGCATGTGCCCAGAATGGATT GGAAGTTTCACTAAGTAGTTTGAACCTGGCTGTTCCTCCACCAAGATTTTTAAAAAGAGAATTATTTGGCTTTAAATCATATCTTTCTAA ATACCAGATGAGTAGCTTCTCAAACAAGGAAGACCGTTGCATTGGCTGCTGTGAGGCAAATAAATTGGTGATTTCGGAATTGAGAATTAA GCTTGCAATAAAAGAGGCAGAAATTCAAAAGCTTCATGCAAACCTGACTGCAAATCAGTTATCTCAGAGTCTTATTACTTGTAATGACAG CCAAGAAAGTAGCAAATTAAGTAGTTTAGAAACAGAACCTGTAAAGCTAGGTGGTCATCAAGTAGCAGAAAGCGTAAAAGATCAAAATCA ACATACTATGAACAAGCAATATGAAAAAGAGAGGCAAAGACTTGTTACTGGAATAGAAGAACTACGTACTAAGCTGATACAAATAGAAGC TGAAAATTCTGATTTGAAGGTTAACATGGCTCACAGAACTAGTCAGTTTCAGCTGATTCAAGAGGAGCTGCTAGAGAAAGCTTCAAACTC CAGCAAACTGGAAAGTGAAATGACAAAGAAATGTTCTCAACTTTTAACTCTTGAGAAACAGCTGGAAGAAAAGATAGTTGCTTATTCCTC TATTGCTGCAAAAAATGCAGAACTAGAACAGGAGCTTATGCTTGAAGCTCAACTAGAGAAAAAGGACCAACAATTTAAAGAACAAGAAAA GACTATGTCCATGTTGCAACAAGATATAATATGCAAACAACATCATCTTGAATCACTAGATAGACTCTTGACGGAAAGCAAAGGGGAAAT GAAAAAGGAAAATATGAAGAAAGATGAAGCTTTAAAAGCATTACAGAACCAAGTATCTGAAGAAACAATCAAGGTTAGGCAACTAGATTC AGCATTGGAAATTTGTAAGGAAGAACTTGTCTTGCATTTGAATCAATTGGAAGGAAATAAGGAAAAGTTTGAAAAACAGTTAAAGAAGAA ATCTGAAGAGGTATATTGTTTACAGAAAGAGCTAAAGATAAAAAATCACAGTCTTCAAGAGACTTCTGAGCAAAACGTTATTCTACAGCA TACTCTTCAGCAACAGCAGCAAATGTTACAACAAGAGACAATTAGAAATGGAGAGCTAGAAGATACTCAAACTAAACTTGAAAAACAGGT GTCAAAACTGGAACAAGAACTTCAAAAACAAAGGGAAAGTTCAGCTGAAAAGTTGAGAAAAATGGAGGAGAAATGTGAATCAGCTGCACA TGAAGCAGATTTGAAAAGGCAAAAAGTGATTGAGCTTACTGGCACTGCCAGGCAAGTAAAGATTGAGATGGATCAGTACAAAGAAGAGCT GTCTAAAATGGAAAAGGAAATAATGCACCTAAAACGAGATGGAGAAAATAAAGCAATGCACCTCTCTCAATTAGATATGATCTTAGATCA GACAAAGACAGAGCTAGAAAAGAAAACAAATGCTGTAAAGGAGTTAGAAAAGTTACAGCACAGTACTGAAACTGAACTAACAGAAGCCTT GCAAAAACGGGAAGTACTTGAGACTGAACTACAAAATGCTCATGGAGAATTAAAAAGTACTTTAAGACAACTCCAGGAATTGAGAGATGT ACTACAGAAGGCTCAATTATCATTAGAGGAAAAATACACTACTATAAAGGATCTCACAGCTGAACTTAGAGAATGCAAGATGGAGATTGA AGACAAAAAGCAGGAGCTCCTTGAAATGGATCAGGCACTTAAAGAGAGAAATTGGGAACTAAAGCAAAGAGCAGCTCAGGTTACACATTT GGATATGACTATTCGTGAGCACAGAGGAGAAATGGAACAAAAAATAATTAAATTAGAAGGTACTCTGGAGAAATCAGAATTGGAACTTAA AGAATGTAACAAACAGATAGAAAGTCTGAATGACAAATTACAAAATGCTAAAGAACAGCTTCGAGAAAAAGAGTTTATAATGCTACAAAA TGAACAGGAGATAAGTCAACTGAAAAAAGAAATTGAAAGAACACAACAAAGGATGAAAGAAATGGAGAGTGTTATGAAAGAGCAAGAACA GTACATTGCCACTCAGTACAAGGAGGCCATAGATTTGGGGCAAGAATTGAGGCTGACCCGGGAGCAGGTGCAGAACTCTCATACAGAATT GGCAGAGGCTCGTCATCAGCAAGTCCAAGCACAGAGAGAAATAGAAAGGCTCTCTAGTGAACTGGAGGATATGAAGCAACTCTCTAAAGA GAAAGATGCTCATGGAAACCATTTAGCTGAAGAACTGGGGGCTTCTAAAGTACGTGAAGCTCATTTAGAAGCAAGAATGCAAGCAGAAAT CAAGAAATTGTCAGCAGAAGTAGAATCTCTCAAAGAAGCTTATCATATGGAGATGATTTCACATCAAGAGAACCATGCAAAGTGGAAGAT TTCTGCTGACTCTCAAAAGTCTTCTGTTCAGCAACTAAACGAACAGTTAGAGAAGGCAAAATTGGAATTAGAAGAAGCTCAGGATACTGT AAGCAATTTGCATCAACAAGTCCAAGATAGGAATGAAGTAATTGAAGCTGCAAATGAAGCATTACTTACTAAAGGAGAAAATGTGTAATT CAAAGAAGATACTGATGTGTTGAAAAAATGGAATTTTTGGTACTGTGCTGTTTACTTATTATATGTAGCTCATACTTCATAGAAGCTGTT ATTTTGCTTTTGAATAAATTTTATATTTCAATATTTTAAAAGAAAGCCCTTCTAAAACTTAATTATATTTTTAAAGAAAATTTATTATTT >In-frame_ENST00000371730_ENST00000338949_TCGA-UY-A78N-01A_EPS15_chr1_51934145_-_CCDC18_chr1_93676359_length(amino acids)=955AA_start in transcript=10_stop in transcript=2877 MAAAAQLSLTQLSSGNPVYEKYYRQVDTGNTGRVLASDAAAFLKKSGLPDLILGKIWDLADTDGKGILNKQEFFVALRLVACAQNGLEVS LSSLNLAVPPPRFLKRELFGFKSYLSKYQMSSFSNKEDRCIGCCEANKLVISELRIKLAIKEAEIQKLHANLTANQLSQSLITCNDSQES SKLSSLETEPVKLGGHQVAESVKDQNQHTMNKQYEKERQRLVTGIEELRTKLIQIEAENSDLKVNMAHRTSQFQLIQEELLEKASNSSKL ESEMTKKCSQLLTLEKQLEEKIVAYSSIAAKNAELEQELMLEAQLEKKDQQFKEQEKTMSMLQQDIICKQHHLESLDRLLTESKGEMKKE NMKKDEALKALQNQVSEETIKVRQLDSALEICKEELVLHLNQLEGNKEKFEKQLKKKSEEVYCLQKELKIKNHSLQETSEQNVILQHTLQ QQQQMLQQETIRNGELEDTQTKLEKQVSKLEQELQKQRESSAEKLRKMEEKCESAAHEADLKRQKVIELTGTARQVKIEMDQYKEELSKM EKEIMHLKRDGENKAMHLSQLDMILDQTKTELEKKTNAVKELEKLQHSTETELTEALQKREVLETELQNAHGELKSTLRQLQELRDVLQK AQLSLEEKYTTIKDLTAELRECKMEIEDKKQELLEMDQALKERNWELKQRAAQVTHLDMTIREHRGEMEQKIIKLEGTLEKSELELKECN KQIESLNDKLQNAKEQLREKEFIMLQNEQEISQLKKEIERTQQRMKEMESVMKEQEQYIATQYKEAIDLGQELRLTREQVQNSHTELAEA RHQQVQAQREIERLSSELEDMKQLSKEKDAHGNHLAEELGASKVREAHLEARMQAEIKKLSAEVESLKEAYHMEMISHQENHAKWKISAD -------------------------------------------------------------- >In-frame_ENST00000371733_ENST00000343253_TCGA-UY-A78N-01A_EPS15_chr1_51934145_-_CCDC18_chr1_93676359_length(transcript)=3562nt_BP=406nt GCCCCGGCCTCGCCTGCGGCCGCTCCCTCCGCCTCCTCCCCGCCCCGAGCCCCAGTCAGCCCGTCTTCCTTCCCCTCCCTTGCATGATGG AAACACCATGGCTGCGGCGGCCCAGCTCTCTCTGACACAGTTATCAAGTGGGAATCCTGTATATGAAAAATACTATAGACAGGTTGATAC AGGCAATACTGGAAGGGTGTTGGCTTCTGATGCTGCTGCTTTCCTGAAAAAATCAGGGCTTCCAGACTTGATACTTGGAAAGATTTGGGA TTTAGCCGACACAGATGGCAAAGGTATCCTGAACAAACAAGAATTCTTTGTTGCTTTGCGTCTTGTGGCATGTGCCCAGAATGGATTGGA AGTTTCACTAAGTAGTTTGAACCTGGCTGTTCCTCCACCAAGATTTTTAAAAAGAGAATTATTTGGCTTTAAATCATATCTTTCTAAATA CCAGATGAGTAGCTTCTCAAACAAGGAAGACCGTTGCATTGGCTGCTGTGAGGCAAATAAATTGGTGATTTCGGAATTGAGAATTAAGCT TGCAATAAAAGAGGCAGAAATTCAAAAGCTTCATGCAAACCTGACTGCAAATCAGTTATCTCAGAGTCTTATTACTTGTAATGACAGCCA AGAAAGTAGCAAATTAAGTAGTTTAGAAACAGAACCTGTAAAGCTAGGTGGTCATCAAGTAGAAAGCGTAAAAGATCAAAATCAACATAC TATGAACAAGCAATATGAAAAAGAGAGGCAAAGACTTGTTACTGGAATAGAAGAACTACGTACTAAGCTGATACAAATAGAAGCTGAAAA TTCTGATTTGAAGGTTAACATGGCTCACAGAACTAGTCAGTTTCAGCTGATTCAAGAGGAGCTGCTAGAGAAAGCTTCAAACTCCAGCAA ACTGGAAAGTGAAATGACAAAGAAATGTTCTCAACTTTTAACTCTTGAGAAACAGCTGGAAGAAAAGATAGTTGCTTATTCCTCTATTGC TGCAAAAAATGCAGAACTAGAACAGGAGCTTATGGAAAAGAATGAAAAGATAAGGAGTCTAGAAACCAATATTAATACAGAGCATGAGAA AATTTGTTTAGCCTTTGAAAAAGCAAAGAAAATTCACTTGGAACAGCATAAAGAAATGGAAAAGCAGATTGAAAGACTTGAAGCTCAACT AGAGAAAAAGGACCAACAATTTAAAGAACAAGAAAAGACTATGTCCATGTTGCAACAAGATATAATATGCAAACAACATCATCTTGAATC ACTAGATAGACTCTTGACGGAAAGCAAAGGGGAAATGAAAAAGGAAAATATGAAGAAAGATGAAGCTTTAAAAGCATTACAGAACCAAGT ATCTGAAGAAACAATCAAGGTTAGGCAACTAGATTCAGCATTGGAAATTTGTAAGGAAGAACTTGTCTTGCATTTGAATCAATTGGAAGG AAATAAGGAAAAGTTTGAAAAACAGTTAAAGAAGAAATCTGAAGAGGTATATTGTTTACAGAAAGAGCTAAAGATAAAAAATCACAGTCT TCAAGAGACTTCTGAGCAAAACGTTATTCTACAGCATACTCTTCAGCAACAGCAGCAAATGTTACAACAAGAGACAATTAGAAATGGAGA GCTAGAAGATACTCAAACTAAACTTGAAAAACAGGTGTCAAAACTGGAACAAGAACTTCAAAAACAAAGGGAAAGTTCAGCTGAAAAGTT GAGAAAAATGGAGGAGAAATGTGAATCAGCTGCACATGAAGCAGATTTGAAAAGGCAAAAAGTGATTGAGCTTACTGGCACTGCCAGGCA AGTAAAGATTGAGATGGATCAGTACAAAGAAGAGCTGTCTAAAATGGAAAAGGAAATAATGCACCTAAAACGAGATGGAGAAAATAAAGC AATGCACCTCTCTCAATTAGATATGATCTTAGATCAGACAAAGACAGAGCTAGAAAAGAAAACAAATGCTGTAAAGGAGTTAGAAAAGTT ACAGCACAGTACTGAAACTGAACTAACAGAAGCCTTGCAAAAACGGGAAGTACTTGAGACTGAACTACAAAATGCTCATGGAGAATTAAA AAGTACTTTAAGACAACTCCAGGAATTGAGAGATGTACTACAGAAGGCTCAATTATCATTAGAGGAAAAATACACTACTATAAAGGATCT CACAGCTGAACTTAGAGAATGCAAGATGGAGATTGAAGACAAAAAGCAGGAGCTCCTTGAAATGGATCAGGCACTTAAAGAGAGAAATTG GGAACTAAAGCAAAGAGCAGCTCAGGTTACACATTTGGATATGACTATTCGTGAGCACAGAGGAGAAATGGAACAAAAAATAATTAAATT AGAAGGTACTCTGGAGAAATCAGAATTGGAACTTAAAGAATGTAACAAACAGATAGAAAGTCTGAATGACAAATTACAAAATGCTAAAGA ACAGCTTCGAGAAAAAGAGTTTATAATGCTACAAAATGAACAGGAGATAAGTCAACTGAAAAAAGAAATTGAAAGAACACAACAAAGGAT GAAAGAAATGGAGAGTGTTATGAAAGAGCAAGAACAGTACATTGCCACTCAGTACAAGGAGGCCATAGATTTGGGGCAAGAATTGAGGCT GACCCGGGAGCAGGTGCAGAACTCTCATACAGAATTGGCAGAGGCTCGTCATCAGCAAGTCCAAGCACAGAGAGAAATAGAAAGGCTCTC TAGTGAACTGGAGGATATGAAGCAACTCTCTAAAGAGAAAGATGCTCATGGAAACCATTTAGCTGAAGAACTGGGGGCTTCTAAAGTACG TGAAGCTCATTTAGAAGCAAGAATGCAAGCAGAAATCAAGAAATTGTCAGCAGAAGTAGAATCTCTCAAAGAAGCTTATCATATGGAGAT GATTTCACATCAAGAGAACCATGCAAAGTGGAAGATTTCTGCTGACTCTCAAAAGTCTTCTGTTCAGCAACTAAACGAACAGTTAGAGAA GGCAAAATTGGAATTAGAAGAAGCTCAGGATACTGTAAGCAATTTGCATCAACAAGTCCAAGATAGGAATGAAGTAATTGAAGCTGCAAA TGAAGCATTACTTACTAAAGAATCAGAATTAACCAGATTACAGGCCAAAATTTCTGGACATGAAAAGGCAGAAGACATCAAGTTTCTGCC AGCCCCATTTACATCTCCAACAGAAATTATGCCTGATGTTCAAGATCCAAAATTTGCTAAATGTTTTCACACATCTTTTTCCAAGTGTAC AAAATTACGTCGCTCTATTAGTGCCAGTGATCTTACTTTCAAAATTCATGGTGATGAAGATCTTTCTGAAGAATTACTACAGGACTTAAA GAAAATGCAATTAGAACAGCCTTCAACATTAGAAGAAAGCCATAAGAATCTGACTTACACCCAGCCAGACTCATTTAAACCTCTCACATA TAACCTAGAAGCTGATAGTTCTGAGAATAATGACTTTAACACGCTTAGTGGGATGCTAAGATACATAAACAAAGAAGTAAGACTATTAAA >In-frame_ENST00000371733_ENST00000343253_TCGA-UY-A78N-01A_EPS15_chr1_51934145_-_CCDC18_chr1_93676359_length(amino acids)=1183AA_start in transcript=13_stop in transcript=3561 MRPLPPPPPRPEPQSARLPSPPLHDGNTMAAAAQLSLTQLSSGNPVYEKYYRQVDTGNTGRVLASDAAAFLKKSGLPDLILGKIWDLADT DGKGILNKQEFFVALRLVACAQNGLEVSLSSLNLAVPPPRFLKRELFGFKSYLSKYQMSSFSNKEDRCIGCCEANKLVISELRIKLAIKE AEIQKLHANLTANQLSQSLITCNDSQESSKLSSLETEPVKLGGHQVESVKDQNQHTMNKQYEKERQRLVTGIEELRTKLIQIEAENSDLK VNMAHRTSQFQLIQEELLEKASNSSKLESEMTKKCSQLLTLEKQLEEKIVAYSSIAAKNAELEQELMEKNEKIRSLETNINTEHEKICLA FEKAKKIHLEQHKEMEKQIERLEAQLEKKDQQFKEQEKTMSMLQQDIICKQHHLESLDRLLTESKGEMKKENMKKDEALKALQNQVSEET IKVRQLDSALEICKEELVLHLNQLEGNKEKFEKQLKKKSEEVYCLQKELKIKNHSLQETSEQNVILQHTLQQQQQMLQQETIRNGELEDT QTKLEKQVSKLEQELQKQRESSAEKLRKMEEKCESAAHEADLKRQKVIELTGTARQVKIEMDQYKEELSKMEKEIMHLKRDGENKAMHLS QLDMILDQTKTELEKKTNAVKELEKLQHSTETELTEALQKREVLETELQNAHGELKSTLRQLQELRDVLQKAQLSLEEKYTTIKDLTAEL RECKMEIEDKKQELLEMDQALKERNWELKQRAAQVTHLDMTIREHRGEMEQKIIKLEGTLEKSELELKECNKQIESLNDKLQNAKEQLRE KEFIMLQNEQEISQLKKEIERTQQRMKEMESVMKEQEQYIATQYKEAIDLGQELRLTREQVQNSHTELAEARHQQVQAQREIERLSSELE DMKQLSKEKDAHGNHLAEELGASKVREAHLEARMQAEIKKLSAEVESLKEAYHMEMISHQENHAKWKISADSQKSSVQQLNEQLEKAKLE LEEAQDTVSNLHQQVQDRNEVIEAANEALLTKESELTRLQAKISGHEKAEDIKFLPAPFTSPTEIMPDVQDPKFAKCFHTSFSKCTKLRR SISASDLTFKIHGDEDLSEELLQDLKKMQLEQPSTLEESHKNLTYTQPDSFKPLTYNLEADSSENNDFNTLSGMLRYINKEVRLLKKSSM -------------------------------------------------------------- >In-frame_ENST00000371733_ENST00000401026_TCGA-UY-A78N-01A_EPS15_chr1_51934145_-_CCDC18_chr1_93676359_length(transcript)=3227nt_BP=406nt GCCCCGGCCTCGCCTGCGGCCGCTCCCTCCGCCTCCTCCCCGCCCCGAGCCCCAGTCAGCCCGTCTTCCTTCCCCTCCCTTGCATGATGG AAACACCATGGCTGCGGCGGCCCAGCTCTCTCTGACACAGTTATCAAGTGGGAATCCTGTATATGAAAAATACTATAGACAGGTTGATAC AGGCAATACTGGAAGGGTGTTGGCTTCTGATGCTGCTGCTTTCCTGAAAAAATCAGGGCTTCCAGACTTGATACTTGGAAAGATTTGGGA TTTAGCCGACACAGATGGCAAAGGTATCCTGAACAAACAAGAATTCTTTGTTGCTTTGCGTCTTGTGGCATGTGCCCAGAATGGATTGGA AGTTTCACTAAGTAGTTTGAACCTGGCTGTTCCTCCACCAAGATTTTTAAAAAGAGAATTATTTGGCTTTAAATCATATCTTTCTAAATA CCAGATGAGTAGCTTCTCAAACAAGGAAGACCGTTGCATTGGCTGCTGTGAGGCAAATAAATTGGTGATTTCGGAATTGAGAATTAAGCT TGCAATAAAAGAGGCAGAAATTCAAAAGCTTCATGCAAACCTGACTGCAAATCAGTTATCTCAGAGTCTTATTACTTGTAATGACAGCCA AGAAAGTAGCAAATTAAGTAGTTTAGAAACAGAACCTGTAAAGCTAGGTGGTCATCAAGTAGCAGAAAGCGTAAAAGATCAAAATCAACA TACTATGAACAAGCAATATGAAAAAGAGAGGCAAAGACTTGTTACTGGAATAGAAGAACTACGTACTAAGCTGATACAAATAGAAGCTGA AAATTCTGATTTGAAGGTTAACATGGCTCACAGAACTAGTCAGTTTCAGCTGATTCAAGAGGAGCTGCTAGAGAAAGCTTCAAACTCCAG CAAACTGGAAAGTGAAATGACAAAGAAATGTTCTCAACTTTTAACTCTTGAGAAACAGCTGGAAGAAAAGATAGTTGCTTATTCCTCTAT TGCTGCAAAAAATGCAGAACTAGAACAGGAGCTTATGGAAAAGAATGAAAAGATAAGGAGTCTAGAAACCAATATTAATACAGAGCATGA GAAAATTTGTTTAGCCTTTGAAAAAGCAAAGAAAATTCACTTGGAACAGCATAAAGAAATGGAAAAGCAGATTGAAAGACTTGAAGCTCA ACTAGAGAAAAAGGACCAACAATTTAAAGAACAAGAAAAGACTATGTCCATGTTGCAACAAGATATAATATGCAAACAACATCATCTTGA ATCACTAGATAGACTCTTGACGGAAAGCAAAGGGGAAATGAAAAAGGAAAATATGAAGAAAGATGAAGCTTTAAAAGCATTACAGAACCA AGTATCTGAAGAAACAATCAAGGTTAGGCAACTAGATTCAGCATTGGAAATTTGTAAGGAAGAACTTGTCTTGCATTTGAATCAATTGGA AGGAAATAAGGAAAAGTTTGAAAAACAGTTAAAGAAGAAATCTGAAGAGGTATATTGTTTACAGAAAGAGCTAAAGATAAAAAATCACAG TCTTCAAGAGACTTCTGAGCAAAACGTTATTCTACAGCATACTCTTCAGCAACAGCAGCAAATGTTACAACAAGAGACAATTAGAAATGG AGAGCTAGAAGATACTCAAACTAAACTTGAAAAACAGGTGTCAAAACTGGAACAAGAACTTCAAAAACAAAGGGAAAGTTCAGCTGAAAA GTTGAGAAAAATGGAGGAGAAATGTGAATCAGCTGCACATGAAGCAGATTTGAAAAGGCAAAAAGTGATTGAGCTTACTGGCACTGCCAG GCAAGTAAAGATTGAGATGGATCAGTACAAAGAAGAGCTGTCTAAAATGGAAAAGGAAATAATGCACCTAAAACGAGATGGAGAAAATAA AGCAATGCACCTCTCTCAATTAGATATGATCTTAGATCAGACAAAGACAGAGCTAGAAAAGAAAACAAATGCTGTAAAGGAGTTAGAAAA GTTACAGCACAGTACTGAAACTGAACTAACAGAAGCCTTGCAAAAACGGGAAGTACTTGAGACTGAACTACAAAATGCTCATGGAGAATT AAAAAGTACTTTAAGACAACTCCAGGAATTGAGAGATGTACTACAGAAGGCTCAATTATCATTAGAGGAAAAATACACTACTATAAAGGA TCTCACAGCTGAACTTAGAGAATGCAAGATGGAGATTGAAGACAAAAAGCAGGAGCTCCTTGAAATGGATCAGGCACTTAAAGAGAGAAA TTGGGAACTAAAGCAAAGAGCAGCTCAGGTTACACATTTGGATATGACTATTCGTGAGCACAGAGGAGAAATGGAACAAAAAATAATTAA ATTAGAAGGTACTCTGGAGAAATCAGAATTGGAACTTAAAGAATGTAACAAACAGATAGAAAGTCTGAATGACAAATTACAAAATGCTAA AGAACAGCTTCGAGAAAAAGAGTTTATAATGCTACAAAATGAACAGGAGATAAGTCAACTGAAAAAAGAAATTGAAAGAACACAACAAAG GATGAAAGAAATGGAGAGTGTTATGAAAGAGCAAGAACAGTACATTGCCACTCAGTACAAGGAGGCCATAGATTTGGGGCAAGAATTGAG GCTGACCCGGGAGCAGGTGCAGAACTCTCATACAGAATTGGCAGAGGCTCGTCATCAGCAAGTCCAAGCACAGAGAGAAATAGAAAGGCT CTCTAGTGAACTGGAGGATATGAAGCAACTCTCTAAAGAGAAAGATGCTCATGGAAACCATTTAGCTGAAGAACTGGGGGCTTCTAAAGT ACGTGAAGCTCATTTAGAAGCAAGAATGCAAGCAGAAATCAAGAAATTGTCAGCAGAAGTAGAATCTCTCAAAGAAGCTTATCATATGGA GATGATTTCACATCAAGAGAACCATGCAAAGTGGAAGATTTCTGCTGACTCTCAAAAGTCTTCTGTTCAGCAACTAAACGAACAGTTAGA GAAGGCAAAATTGGAATTAGAAGAAGCTCAGGATACTGTAAGCAATTTGCATCAACAAGTCCAAGATAGGAATGAAGTAATTGAAGCTGC AAATGAAGCATTACTTACTAAAGGAGAAAATGTGTAATTCAAAGAAGATACTGATGTGTTGAAAAAATGGAATTTTTGGTACTGTGCTGT >In-frame_ENST00000371733_ENST00000401026_TCGA-UY-A78N-01A_EPS15_chr1_51934145_-_CCDC18_chr1_93676359_length(amino acids)=1027AA_start in transcript=13_stop in transcript=3096 MRPLPPPPPRPEPQSARLPSPPLHDGNTMAAAAQLSLTQLSSGNPVYEKYYRQVDTGNTGRVLASDAAAFLKKSGLPDLILGKIWDLADT DGKGILNKQEFFVALRLVACAQNGLEVSLSSLNLAVPPPRFLKRELFGFKSYLSKYQMSSFSNKEDRCIGCCEANKLVISELRIKLAIKE AEIQKLHANLTANQLSQSLITCNDSQESSKLSSLETEPVKLGGHQVAESVKDQNQHTMNKQYEKERQRLVTGIEELRTKLIQIEAENSDL KVNMAHRTSQFQLIQEELLEKASNSSKLESEMTKKCSQLLTLEKQLEEKIVAYSSIAAKNAELEQELMEKNEKIRSLETNINTEHEKICL AFEKAKKIHLEQHKEMEKQIERLEAQLEKKDQQFKEQEKTMSMLQQDIICKQHHLESLDRLLTESKGEMKKENMKKDEALKALQNQVSEE TIKVRQLDSALEICKEELVLHLNQLEGNKEKFEKQLKKKSEEVYCLQKELKIKNHSLQETSEQNVILQHTLQQQQQMLQQETIRNGELED TQTKLEKQVSKLEQELQKQRESSAEKLRKMEEKCESAAHEADLKRQKVIELTGTARQVKIEMDQYKEELSKMEKEIMHLKRDGENKAMHL SQLDMILDQTKTELEKKTNAVKELEKLQHSTETELTEALQKREVLETELQNAHGELKSTLRQLQELRDVLQKAQLSLEEKYTTIKDLTAE LRECKMEIEDKKQELLEMDQALKERNWELKQRAAQVTHLDMTIREHRGEMEQKIIKLEGTLEKSELELKECNKQIESLNDKLQNAKEQLR EKEFIMLQNEQEISQLKKEIERTQQRMKEMESVMKEQEQYIATQYKEAIDLGQELRLTREQVQNSHTELAEARHQQVQAQREIERLSSEL EDMKQLSKEKDAHGNHLAEELGASKVREAHLEARMQAEIKKLSAEVESLKEAYHMEMISHQENHAKWKISADSQKSSVQQLNEQLEKAKL -------------------------------------------------------------- >In-frame_ENST00000371733_ENST00000338949_TCGA-UY-A78N-01A_EPS15_chr1_51934145_-_CCDC18_chr1_93676359_length(transcript)=3201nt_BP=406nt GCCCCGGCCTCGCCTGCGGCCGCTCCCTCCGCCTCCTCCCCGCCCCGAGCCCCAGTCAGCCCGTCTTCCTTCCCCTCCCTTGCATGATGG AAACACCATGGCTGCGGCGGCCCAGCTCTCTCTGACACAGTTATCAAGTGGGAATCCTGTATATGAAAAATACTATAGACAGGTTGATAC AGGCAATACTGGAAGGGTGTTGGCTTCTGATGCTGCTGCTTTCCTGAAAAAATCAGGGCTTCCAGACTTGATACTTGGAAAGATTTGGGA TTTAGCCGACACAGATGGCAAAGGTATCCTGAACAAACAAGAATTCTTTGTTGCTTTGCGTCTTGTGGCATGTGCCCAGAATGGATTGGA AGTTTCACTAAGTAGTTTGAACCTGGCTGTTCCTCCACCAAGATTTTTAAAAAGAGAATTATTTGGCTTTAAATCATATCTTTCTAAATA CCAGATGAGTAGCTTCTCAAACAAGGAAGACCGTTGCATTGGCTGCTGTGAGGCAAATAAATTGGTGATTTCGGAATTGAGAATTAAGCT TGCAATAAAAGAGGCAGAAATTCAAAAGCTTCATGCAAACCTGACTGCAAATCAGTTATCTCAGAGTCTTATTACTTGTAATGACAGCCA AGAAAGTAGCAAATTAAGTAGTTTAGAAACAGAACCTGTAAAGCTAGGTGGTCATCAAGTAGCAGAAAGCGTAAAAGATCAAAATCAACA TACTATGAACAAGCAATATGAAAAAGAGAGGCAAAGACTTGTTACTGGAATAGAAGAACTACGTACTAAGCTGATACAAATAGAAGCTGA AAATTCTGATTTGAAGGTTAACATGGCTCACAGAACTAGTCAGTTTCAGCTGATTCAAGAGGAGCTGCTAGAGAAAGCTTCAAACTCCAG CAAACTGGAAAGTGAAATGACAAAGAAATGTTCTCAACTTTTAACTCTTGAGAAACAGCTGGAAGAAAAGATAGTTGCTTATTCCTCTAT TGCTGCAAAAAATGCAGAACTAGAACAGGAGCTTATGCTTGAAGCTCAACTAGAGAAAAAGGACCAACAATTTAAAGAACAAGAAAAGAC TATGTCCATGTTGCAACAAGATATAATATGCAAACAACATCATCTTGAATCACTAGATAGACTCTTGACGGAAAGCAAAGGGGAAATGAA AAAGGAAAATATGAAGAAAGATGAAGCTTTAAAAGCATTACAGAACCAAGTATCTGAAGAAACAATCAAGGTTAGGCAACTAGATTCAGC ATTGGAAATTTGTAAGGAAGAACTTGTCTTGCATTTGAATCAATTGGAAGGAAATAAGGAAAAGTTTGAAAAACAGTTAAAGAAGAAATC TGAAGAGGTATATTGTTTACAGAAAGAGCTAAAGATAAAAAATCACAGTCTTCAAGAGACTTCTGAGCAAAACGTTATTCTACAGCATAC TCTTCAGCAACAGCAGCAAATGTTACAACAAGAGACAATTAGAAATGGAGAGCTAGAAGATACTCAAACTAAACTTGAAAAACAGGTGTC AAAACTGGAACAAGAACTTCAAAAACAAAGGGAAAGTTCAGCTGAAAAGTTGAGAAAAATGGAGGAGAAATGTGAATCAGCTGCACATGA AGCAGATTTGAAAAGGCAAAAAGTGATTGAGCTTACTGGCACTGCCAGGCAAGTAAAGATTGAGATGGATCAGTACAAAGAAGAGCTGTC TAAAATGGAAAAGGAAATAATGCACCTAAAACGAGATGGAGAAAATAAAGCAATGCACCTCTCTCAATTAGATATGATCTTAGATCAGAC AAAGACAGAGCTAGAAAAGAAAACAAATGCTGTAAAGGAGTTAGAAAAGTTACAGCACAGTACTGAAACTGAACTAACAGAAGCCTTGCA AAAACGGGAAGTACTTGAGACTGAACTACAAAATGCTCATGGAGAATTAAAAAGTACTTTAAGACAACTCCAGGAATTGAGAGATGTACT ACAGAAGGCTCAATTATCATTAGAGGAAAAATACACTACTATAAAGGATCTCACAGCTGAACTTAGAGAATGCAAGATGGAGATTGAAGA CAAAAAGCAGGAGCTCCTTGAAATGGATCAGGCACTTAAAGAGAGAAATTGGGAACTAAAGCAAAGAGCAGCTCAGGTTACACATTTGGA TATGACTATTCGTGAGCACAGAGGAGAAATGGAACAAAAAATAATTAAATTAGAAGGTACTCTGGAGAAATCAGAATTGGAACTTAAAGA ATGTAACAAACAGATAGAAAGTCTGAATGACAAATTACAAAATGCTAAAGAACAGCTTCGAGAAAAAGAGTTTATAATGCTACAAAATGA ACAGGAGATAAGTCAACTGAAAAAAGAAATTGAAAGAACACAACAAAGGATGAAAGAAATGGAGAGTGTTATGAAAGAGCAAGAACAGTA CATTGCCACTCAGTACAAGGAGGCCATAGATTTGGGGCAAGAATTGAGGCTGACCCGGGAGCAGGTGCAGAACTCTCATACAGAATTGGC AGAGGCTCGTCATCAGCAAGTCCAAGCACAGAGAGAAATAGAAAGGCTCTCTAGTGAACTGGAGGATATGAAGCAACTCTCTAAAGAGAA AGATGCTCATGGAAACCATTTAGCTGAAGAACTGGGGGCTTCTAAAGTACGTGAAGCTCATTTAGAAGCAAGAATGCAAGCAGAAATCAA GAAATTGTCAGCAGAAGTAGAATCTCTCAAAGAAGCTTATCATATGGAGATGATTTCACATCAAGAGAACCATGCAAAGTGGAAGATTTC TGCTGACTCTCAAAAGTCTTCTGTTCAGCAACTAAACGAACAGTTAGAGAAGGCAAAATTGGAATTAGAAGAAGCTCAGGATACTGTAAG CAATTTGCATCAACAAGTCCAAGATAGGAATGAAGTAATTGAAGCTGCAAATGAAGCATTACTTACTAAAGGAGAAAATGTGTAATTCAA AGAAGATACTGATGTGTTGAAAAAATGGAATTTTTGGTACTGTGCTGTTTACTTATTATATGTAGCTCATACTTCATAGAAGCTGTTATT TTGCTTTTGAATAAATTTTATATTTCAATATTTTAAAAGAAAGCCCTTCTAAAACTTAATTATATTTTTAAAGAAAATTTATTATTTTAT >In-frame_ENST00000371733_ENST00000338949_TCGA-UY-A78N-01A_EPS15_chr1_51934145_-_CCDC18_chr1_93676359_length(amino acids)=983AA_start in transcript=13_stop in transcript=2964 MRPLPPPPPRPEPQSARLPSPPLHDGNTMAAAAQLSLTQLSSGNPVYEKYYRQVDTGNTGRVLASDAAAFLKKSGLPDLILGKIWDLADT DGKGILNKQEFFVALRLVACAQNGLEVSLSSLNLAVPPPRFLKRELFGFKSYLSKYQMSSFSNKEDRCIGCCEANKLVISELRIKLAIKE AEIQKLHANLTANQLSQSLITCNDSQESSKLSSLETEPVKLGGHQVAESVKDQNQHTMNKQYEKERQRLVTGIEELRTKLIQIEAENSDL KVNMAHRTSQFQLIQEELLEKASNSSKLESEMTKKCSQLLTLEKQLEEKIVAYSSIAAKNAELEQELMLEAQLEKKDQQFKEQEKTMSML QQDIICKQHHLESLDRLLTESKGEMKKENMKKDEALKALQNQVSEETIKVRQLDSALEICKEELVLHLNQLEGNKEKFEKQLKKKSEEVY CLQKELKIKNHSLQETSEQNVILQHTLQQQQQMLQQETIRNGELEDTQTKLEKQVSKLEQELQKQRESSAEKLRKMEEKCESAAHEADLK RQKVIELTGTARQVKIEMDQYKEELSKMEKEIMHLKRDGENKAMHLSQLDMILDQTKTELEKKTNAVKELEKLQHSTETELTEALQKREV LETELQNAHGELKSTLRQLQELRDVLQKAQLSLEEKYTTIKDLTAELRECKMEIEDKKQELLEMDQALKERNWELKQRAAQVTHLDMTIR EHRGEMEQKIIKLEGTLEKSELELKECNKQIESLNDKLQNAKEQLREKEFIMLQNEQEISQLKKEIERTQQRMKEMESVMKEQEQYIATQ YKEAIDLGQELRLTREQVQNSHTELAEARHQQVQAQREIERLSSELEDMKQLSKEKDAHGNHLAEELGASKVREAHLEARMQAEIKKLSA -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for EPS15-CCDC18 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | EPS15 | chr1:51934145 | chr1:93676359 | ENST00000371733 | - | 5 | 25 | 2_330 | 103.0 | 897.0 | DAB2 |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for EPS15-CCDC18 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for EPS15-CCDC18 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |