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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:ERBB2-CNIH4 (FusionGDB2 ID:27109) |
Fusion Gene Summary for ERBB2-CNIH4 |
Fusion gene summary |
Fusion gene information | Fusion gene name: ERBB2-CNIH4 | Fusion gene ID: 27109 | Hgene | Tgene | Gene symbol | ERBB2 | CNIH4 | Gene ID | 2064 | 29097 |
Gene name | erb-b2 receptor tyrosine kinase 2 | cornichon family AMPA receptor auxiliary protein 4 | |
Synonyms | CD340|HER-2|HER-2/neu|HER2|MLN 19|NEU|NGL|TKR1 | CNIH-4|CNIH2|HSPC163 | |
Cytomap | 17q12 | 1q42.11 | |
Type of gene | protein-coding | protein-coding | |
Description | receptor tyrosine-protein kinase erbB-2c-erb B2/neu proteinherstatinhuman epidermal growth factor receptor 2metastatic lymph node gene 19 proteinneuro/glioblastoma derived oncogene homologneuroblastoma/glioblastoma derived oncogene homologp185erbB2 | protein cornichon homolog 4cornichon homolog 4 | |
Modification date | 20200329 | 20200313 | |
UniProtAcc | P04626 | Q9P003 | |
Ensembl transtripts involved in fusion gene | ENST00000584601, ENST00000406381, ENST00000541774, ENST00000445658, ENST00000540147, ENST00000584450, ENST00000269571, ENST00000578199, ENST00000540042, ENST00000584888, | ENST00000465271, ENST00000366858, ENST00000366857, ENST00000468318, ENST00000366856, | |
Fusion gene scores | * DoF score | 50 X 44 X 14=30800 | 10 X 7 X 8=560 |
# samples | 73 | 13 | |
** MAII score | log2(73/30800*10)=-5.39889007670225 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(13/560*10)=-2.10691520391651 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: ERBB2 [Title/Abstract] AND CNIH4 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | ERBB2(37866734)-CNIH4(224553581), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. | ERBB2-CNIH4 seems lost the major protein functional domain in Hgene partner, which is a kinase due to the frame-shifted ORF. ERBB2-CNIH4 seems lost the major protein functional domain in Hgene partner, which is a CGC due to the frame-shifted ORF. ERBB2-CNIH4 seems lost the major protein functional domain in Hgene partner, which is a IUPHAR drug target due to the frame-shifted ORF. ERBB2-CNIH4 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | ERBB2 | GO:0007165 | signal transduction | 10572067 |
Hgene | ERBB2 | GO:0007166 | cell surface receptor signaling pathway | 9685399 |
Hgene | ERBB2 | GO:0007169 | transmembrane receptor protein tyrosine kinase signaling pathway | 7514177 |
Hgene | ERBB2 | GO:0014065 | phosphatidylinositol 3-kinase signaling | 7556068 |
Hgene | ERBB2 | GO:0018108 | peptidyl-tyrosine phosphorylation | 12000754 |
Hgene | ERBB2 | GO:0032886 | regulation of microtubule-based process | 20937854 |
Hgene | ERBB2 | GO:0035556 | intracellular signal transduction | 19372587 |
Hgene | ERBB2 | GO:0042060 | wound healing | 12646923 |
Hgene | ERBB2 | GO:0043406 | positive regulation of MAP kinase activity | 10572067 |
Hgene | ERBB2 | GO:0045785 | positive regulation of cell adhesion | 7556068 |
Hgene | ERBB2 | GO:0046777 | protein autophosphorylation | 7556068 |
Hgene | ERBB2 | GO:0050679 | positive regulation of epithelial cell proliferation | 10572067 |
Hgene | ERBB2 | GO:0071363 | cellular response to growth factor stimulus | 20010870 |
Hgene | ERBB2 | GO:0090314 | positive regulation of protein targeting to membrane | 20010870 |
Fusion gene breakpoints across ERBB2 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across CNIH4 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | UCEC | TCGA-D1-A3JP-01A | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
ChimerDB4 | UCEC | TCGA-D1-A3JP-01A | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
ChimerDB4 | UCEC | TCGA-D1-A3JP-01A | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
ChimerDB4 | UCEC | TCGA-D1-A3JP-01A | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
Top |
Fusion Gene ORF analysis for ERBB2-CNIH4 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000584601 | ENST00000465271 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000584601 | ENST00000366858 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000584601 | ENST00000366857 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000584601 | ENST00000468318 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000584601 | ENST00000366856 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000406381 | ENST00000465271 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000406381 | ENST00000366858 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000406381 | ENST00000366857 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000406381 | ENST00000468318 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000406381 | ENST00000366856 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000541774 | ENST00000465271 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000541774 | ENST00000366858 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000541774 | ENST00000366857 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000541774 | ENST00000468318 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000541774 | ENST00000366856 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
intron-3CDS | ENST00000445658 | ENST00000465271 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
intron-3CDS | ENST00000445658 | ENST00000366858 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
intron-3CDS | ENST00000445658 | ENST00000366857 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
intron-3UTR | ENST00000445658 | ENST00000468318 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
intron-3UTR | ENST00000445658 | ENST00000366856 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000540147 | ENST00000465271 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000540147 | ENST00000366858 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000540147 | ENST00000366857 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000540147 | ENST00000468318 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000540147 | ENST00000366856 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000584450 | ENST00000465271 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000584450 | ENST00000366858 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000584450 | ENST00000366857 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000584450 | ENST00000468318 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000584450 | ENST00000366856 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000269571 | ENST00000465271 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000269571 | ENST00000366858 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000269571 | ENST00000366857 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000269571 | ENST00000468318 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000269571 | ENST00000366856 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000578199 | ENST00000465271 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000578199 | ENST00000366858 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000578199 | ENST00000366857 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000578199 | ENST00000468318 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000578199 | ENST00000366856 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000540042 | ENST00000465271 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000540042 | ENST00000366858 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000540042 | ENST00000366857 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000540042 | ENST00000468318 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000540042 | ENST00000366856 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
intron-3CDS | ENST00000584888 | ENST00000465271 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
intron-3CDS | ENST00000584888 | ENST00000366858 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
intron-3CDS | ENST00000584888 | ENST00000366857 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
intron-3UTR | ENST00000584888 | ENST00000468318 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
intron-3UTR | ENST00000584888 | ENST00000366856 | ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000584601 | ENST00000465271 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000584601 | ENST00000366858 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000584601 | ENST00000366857 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000584601 | ENST00000468318 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000584601 | ENST00000366856 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000406381 | ENST00000465271 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000406381 | ENST00000366858 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000406381 | ENST00000366857 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000406381 | ENST00000468318 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000406381 | ENST00000366856 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000541774 | ENST00000465271 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000541774 | ENST00000366858 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000541774 | ENST00000366857 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000541774 | ENST00000468318 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000541774 | ENST00000366856 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
intron-3CDS | ENST00000445658 | ENST00000465271 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
intron-3CDS | ENST00000445658 | ENST00000366858 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
intron-3CDS | ENST00000445658 | ENST00000366857 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
intron-3UTR | ENST00000445658 | ENST00000468318 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
intron-3UTR | ENST00000445658 | ENST00000366856 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000540147 | ENST00000465271 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000540147 | ENST00000366858 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000540147 | ENST00000366857 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000540147 | ENST00000468318 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000540147 | ENST00000366856 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000584450 | ENST00000465271 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000584450 | ENST00000366858 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000584450 | ENST00000366857 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000584450 | ENST00000468318 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000584450 | ENST00000366856 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000269571 | ENST00000465271 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000269571 | ENST00000366858 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000269571 | ENST00000366857 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000269571 | ENST00000468318 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000269571 | ENST00000366856 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000578199 | ENST00000465271 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000578199 | ENST00000366858 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000578199 | ENST00000366857 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000578199 | ENST00000468318 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000578199 | ENST00000366856 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000540042 | ENST00000465271 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000540042 | ENST00000366858 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
Frame-shift | ENST00000540042 | ENST00000366857 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000540042 | ENST00000468318 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000540042 | ENST00000366856 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
intron-3CDS | ENST00000584888 | ENST00000465271 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
intron-3CDS | ENST00000584888 | ENST00000366858 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
intron-3CDS | ENST00000584888 | ENST00000366857 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
intron-3UTR | ENST00000584888 | ENST00000468318 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
intron-3UTR | ENST00000584888 | ENST00000366856 | ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553581 | + |
In-frame | ENST00000584601 | ENST00000465271 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
In-frame | ENST00000584601 | ENST00000366858 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
In-frame | ENST00000584601 | ENST00000366857 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000584601 | ENST00000468318 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000584601 | ENST00000366856 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
In-frame | ENST00000406381 | ENST00000465271 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
In-frame | ENST00000406381 | ENST00000366858 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
In-frame | ENST00000406381 | ENST00000366857 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000406381 | ENST00000468318 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000406381 | ENST00000366856 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
In-frame | ENST00000541774 | ENST00000465271 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
In-frame | ENST00000541774 | ENST00000366858 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
In-frame | ENST00000541774 | ENST00000366857 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000541774 | ENST00000468318 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000541774 | ENST00000366856 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
intron-3CDS | ENST00000445658 | ENST00000465271 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
intron-3CDS | ENST00000445658 | ENST00000366858 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
intron-3CDS | ENST00000445658 | ENST00000366857 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
intron-3UTR | ENST00000445658 | ENST00000468318 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
intron-3UTR | ENST00000445658 | ENST00000366856 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
In-frame | ENST00000540147 | ENST00000465271 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
In-frame | ENST00000540147 | ENST00000366858 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
In-frame | ENST00000540147 | ENST00000366857 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000540147 | ENST00000468318 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000540147 | ENST00000366856 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
In-frame | ENST00000584450 | ENST00000465271 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
In-frame | ENST00000584450 | ENST00000366858 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
In-frame | ENST00000584450 | ENST00000366857 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000584450 | ENST00000468318 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000584450 | ENST00000366856 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
In-frame | ENST00000269571 | ENST00000465271 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
In-frame | ENST00000269571 | ENST00000366858 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
In-frame | ENST00000269571 | ENST00000366857 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000269571 | ENST00000468318 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000269571 | ENST00000366856 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
In-frame | ENST00000578199 | ENST00000465271 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
In-frame | ENST00000578199 | ENST00000366858 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
In-frame | ENST00000578199 | ENST00000366857 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000578199 | ENST00000468318 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000578199 | ENST00000366856 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
In-frame | ENST00000540042 | ENST00000465271 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
In-frame | ENST00000540042 | ENST00000366858 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
In-frame | ENST00000540042 | ENST00000366857 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000540042 | ENST00000468318 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
5CDS-3UTR | ENST00000540042 | ENST00000366856 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
intron-3CDS | ENST00000584888 | ENST00000465271 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
intron-3CDS | ENST00000584888 | ENST00000366858 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
intron-3CDS | ENST00000584888 | ENST00000366857 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
intron-3UTR | ENST00000584888 | ENST00000468318 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
intron-3UTR | ENST00000584888 | ENST00000366856 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000584601 | ERBB2 | chr17 | 37863394 | + | ENST00000465271 | CNIH4 | chr1 | 224553581 | + | 4844 | 932 | 752 | 1213 | 153 |
ENST00000584601 | ERBB2 | chr17 | 37863394 | + | ENST00000366858 | CNIH4 | chr1 | 224553581 | + | 1429 | 932 | 703 | 1050 | 115 |
ENST00000584601 | ERBB2 | chr17 | 37863394 | + | ENST00000366857 | CNIH4 | chr1 | 224553581 | + | 4703 | 932 | 703 | 1068 | 121 |
ENST00000406381 | ERBB2 | chr17 | 37863394 | + | ENST00000465271 | CNIH4 | chr1 | 224553581 | + | 4557 | 645 | 510 | 926 | 138 |
ENST00000406381 | ERBB2 | chr17 | 37863394 | + | ENST00000366858 | CNIH4 | chr1 | 224553581 | + | 1142 | 645 | 467 | 763 | 98 |
ENST00000406381 | ERBB2 | chr17 | 37863394 | + | ENST00000366857 | CNIH4 | chr1 | 224553581 | + | 4416 | 645 | 467 | 781 | 104 |
ENST00000541774 | ERBB2 | chr17 | 37863394 | + | ENST00000465271 | CNIH4 | chr1 | 224553581 | + | 4092 | 180 | 0 | 461 | 153 |
ENST00000541774 | ERBB2 | chr17 | 37863394 | + | ENST00000366858 | CNIH4 | chr1 | 224553581 | + | 677 | 180 | 0 | 314 | 104 |
ENST00000541774 | ERBB2 | chr17 | 37863394 | + | ENST00000366857 | CNIH4 | chr1 | 224553581 | + | 3951 | 180 | 0 | 320 | 106 |
ENST00000540147 | ERBB2 | chr17 | 37863394 | + | ENST00000465271 | CNIH4 | chr1 | 224553581 | + | 4375 | 463 | 25 | 744 | 239 |
ENST00000540147 | ERBB2 | chr17 | 37863394 | + | ENST00000366858 | CNIH4 | chr1 | 224553581 | + | 960 | 463 | 25 | 597 | 190 |
ENST00000540147 | ERBB2 | chr17 | 37863394 | + | ENST00000366857 | CNIH4 | chr1 | 224553581 | + | 4234 | 463 | 25 | 603 | 192 |
ENST00000584450 | ERBB2 | chr17 | 37863394 | + | ENST00000465271 | CNIH4 | chr1 | 224553581 | + | 4352 | 440 | 2 | 721 | 239 |
ENST00000584450 | ERBB2 | chr17 | 37863394 | + | ENST00000366858 | CNIH4 | chr1 | 224553581 | + | 937 | 440 | 2 | 574 | 190 |
ENST00000584450 | ERBB2 | chr17 | 37863394 | + | ENST00000366857 | CNIH4 | chr1 | 224553581 | + | 4211 | 440 | 2 | 580 | 192 |
ENST00000269571 | ERBB2 | chr17 | 37863394 | + | ENST00000465271 | CNIH4 | chr1 | 224553581 | + | 4296 | 384 | 57 | 665 | 202 |
ENST00000269571 | ERBB2 | chr17 | 37863394 | + | ENST00000366858 | CNIH4 | chr1 | 224553581 | + | 881 | 384 | 57 | 518 | 153 |
ENST00000269571 | ERBB2 | chr17 | 37863394 | + | ENST00000366857 | CNIH4 | chr1 | 224553581 | + | 4155 | 384 | 57 | 524 | 155 |
ENST00000578199 | ERBB2 | chr17 | 37863394 | + | ENST00000465271 | CNIH4 | chr1 | 224553581 | + | 4588 | 676 | 541 | 957 | 138 |
ENST00000578199 | ERBB2 | chr17 | 37863394 | + | ENST00000366858 | CNIH4 | chr1 | 224553581 | + | 1173 | 676 | 498 | 794 | 98 |
ENST00000578199 | ERBB2 | chr17 | 37863394 | + | ENST00000366857 | CNIH4 | chr1 | 224553581 | + | 4447 | 676 | 498 | 812 | 104 |
ENST00000540042 | ERBB2 | chr17 | 37863394 | + | ENST00000465271 | CNIH4 | chr1 | 224553581 | + | 4213 | 301 | 166 | 582 | 138 |
ENST00000540042 | ERBB2 | chr17 | 37863394 | + | ENST00000366858 | CNIH4 | chr1 | 224553581 | + | 798 | 301 | 144 | 419 | 91 |
ENST00000540042 | ERBB2 | chr17 | 37863394 | + | ENST00000366857 | CNIH4 | chr1 | 224553581 | + | 4072 | 301 | 144 | 437 | 97 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000584601 | ENST00000465271 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + | 0.057834342 | 0.9421657 |
ENST00000584601 | ENST00000366858 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + | 0.13345093 | 0.866549 |
ENST00000584601 | ENST00000366857 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + | 0.26847076 | 0.73152924 |
ENST00000406381 | ENST00000465271 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + | 0.060717426 | 0.9392826 |
ENST00000406381 | ENST00000366858 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + | 0.17339388 | 0.8266061 |
ENST00000406381 | ENST00000366857 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + | 0.28449595 | 0.71550405 |
ENST00000541774 | ENST00000465271 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + | 0.05642887 | 0.94357115 |
ENST00000541774 | ENST00000366858 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + | 0.12919718 | 0.8708028 |
ENST00000541774 | ENST00000366857 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + | 0.27613685 | 0.7238631 |
ENST00000540147 | ENST00000465271 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + | 0.018296866 | 0.9817031 |
ENST00000540147 | ENST00000366858 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + | 0.15582278 | 0.84417725 |
ENST00000540147 | ENST00000366857 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + | 0.094604954 | 0.90539503 |
ENST00000584450 | ENST00000465271 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + | 0.018018335 | 0.9819817 |
ENST00000584450 | ENST00000366858 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + | 0.13191701 | 0.868083 |
ENST00000584450 | ENST00000366857 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + | 0.09332618 | 0.90667385 |
ENST00000269571 | ENST00000465271 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + | 0.017273726 | 0.9827262 |
ENST00000269571 | ENST00000366858 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + | 0.08023406 | 0.9197659 |
ENST00000269571 | ENST00000366857 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + | 0.09075072 | 0.90924925 |
ENST00000578199 | ENST00000465271 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + | 0.060766924 | 0.93923306 |
ENST00000578199 | ENST00000366858 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + | 0.28703627 | 0.71296376 |
ENST00000578199 | ENST00000366857 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + | 0.29321608 | 0.70678395 |
ENST00000540042 | ENST00000465271 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + | 0.064463556 | 0.93553644 |
ENST00000540042 | ENST00000366858 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + | 0.22571121 | 0.77428883 |
ENST00000540042 | ENST00000366857 | ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553581 | + | 0.32422227 | 0.67577773 |
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Fusion Genomic Features for ERBB2-CNIH4 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553580 | + | 0.31286955 | 0.68713045 |
ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553580 | + | 0.001822603 | 0.9981774 |
ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553580 | + | 0.00126671 | 0.99873334 |
ERBB2 | chr17 | 37866134 | + | CNIH4 | chr1 | 224553580 | + | 0.31286955 | 0.68713045 |
ERBB2 | chr17 | 37866734 | + | CNIH4 | chr1 | 224553580 | + | 0.001822603 | 0.9981774 |
ERBB2 | chr17 | 37863394 | + | CNIH4 | chr1 | 224553580 | + | 0.00126671 | 0.99873334 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for ERBB2-CNIH4 |
Go to FGviewer for the breakpoints of chr17:37863394-chr1:224553581 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
ERBB2 | CNIH4 |
FUNCTION: Protein tyrosine kinase that is part of several cell surface receptor complexes, but that apparently needs a coreceptor for ligand binding. Essential component of a neuregulin-receptor complex, although neuregulins do not interact with it alone. GP30 is a potential ligand for this receptor. Regulates outgrowth and stabilization of peripheral microtubules (MTs). Upon ERBB2 activation, the MEMO1-RHOA-DIAPH1 signaling pathway elicits the phosphorylation and thus the inhibition of GSK3B at cell membrane. This prevents the phosphorylation of APC and CLASP2, allowing its association with the cell membrane. In turn, membrane-bound APC allows the localization of MACF1 to the cell membrane, which is required for microtubule capture and stabilization. {ECO:0000305}.; FUNCTION: In the nucleus is involved in transcriptional regulation. Associates with the 5'-TCAAATTC-3' sequence in the PTGS2/COX-2 promoter and activates its transcription. Implicated in transcriptional activation of CDKN1A; the function involves STAT3 and SRC. Involved in the transcription of rRNA genes by RNA Pol I and enhances protein synthesis and cell growth. {ECO:0000269|PubMed:10358079, ECO:0000269|PubMed:15380516, ECO:0000269|PubMed:21555369}. | FUNCTION: Involved in G protein-coupled receptors (GPCRs) trafficking from the endoplasmic reticulum to the cell surface; it promotes the exit of GPCRs from the early secretory pathway, likely through interaction with the COPII machinery (PubMed:24405750). {ECO:0000269|PubMed:24405750}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | CNIH4 | chr17:37863394 | chr1:224553581 | ENST00000366857 | 1 | 4 | 118_138 | 46.0 | 93.0 | Transmembrane | Helical | |
Tgene | CNIH4 | chr17:37863394 | chr1:224553581 | ENST00000366857 | 1 | 4 | 57_77 | 46.0 | 93.0 | Transmembrane | Helical | |
Tgene | CNIH4 | chr17:37863394 | chr1:224553581 | ENST00000465271 | 1 | 5 | 118_138 | 46.0 | 140.0 | Transmembrane | Helical | |
Tgene | CNIH4 | chr17:37863394 | chr1:224553581 | ENST00000465271 | 1 | 5 | 57_77 | 46.0 | 140.0 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ERBB2 | chr17:37863394 | chr1:224553581 | ENST00000269571 | + | 2 | 27 | 720_987 | 75.0 | 1256.0 | Domain | Protein kinase |
Hgene | ERBB2 | chr17:37863394 | chr1:224553581 | ENST00000541774 | + | 2 | 27 | 720_987 | 60.0 | 1241.0 | Domain | Protein kinase |
Hgene | ERBB2 | chr17:37863394 | chr1:224553581 | ENST00000269571 | + | 2 | 27 | 676_689 | 75.0 | 1256.0 | Motif | Note=Nuclear localization signal |
Hgene | ERBB2 | chr17:37863394 | chr1:224553581 | ENST00000541774 | + | 2 | 27 | 676_689 | 60.0 | 1241.0 | Motif | Note=Nuclear localization signal |
Hgene | ERBB2 | chr17:37863394 | chr1:224553581 | ENST00000269571 | + | 2 | 27 | 726_734 | 75.0 | 1256.0 | Nucleotide binding | ATP |
Hgene | ERBB2 | chr17:37863394 | chr1:224553581 | ENST00000541774 | + | 2 | 27 | 726_734 | 60.0 | 1241.0 | Nucleotide binding | ATP |
Hgene | ERBB2 | chr17:37863394 | chr1:224553581 | ENST00000269571 | + | 2 | 27 | 23_652 | 75.0 | 1256.0 | Topological domain | Extracellular |
Hgene | ERBB2 | chr17:37863394 | chr1:224553581 | ENST00000269571 | + | 2 | 27 | 676_1255 | 75.0 | 1256.0 | Topological domain | Cytoplasmic |
Hgene | ERBB2 | chr17:37863394 | chr1:224553581 | ENST00000541774 | + | 2 | 27 | 23_652 | 60.0 | 1241.0 | Topological domain | Extracellular |
Hgene | ERBB2 | chr17:37863394 | chr1:224553581 | ENST00000541774 | + | 2 | 27 | 676_1255 | 60.0 | 1241.0 | Topological domain | Cytoplasmic |
Hgene | ERBB2 | chr17:37863394 | chr1:224553581 | ENST00000269571 | + | 2 | 27 | 653_675 | 75.0 | 1256.0 | Transmembrane | Helical |
Hgene | ERBB2 | chr17:37863394 | chr1:224553581 | ENST00000541774 | + | 2 | 27 | 653_675 | 60.0 | 1241.0 | Transmembrane | Helical |
Tgene | CNIH4 | chr17:37863394 | chr1:224553581 | ENST00000366857 | 1 | 4 | 5_25 | 46.0 | 93.0 | Transmembrane | Helical | |
Tgene | CNIH4 | chr17:37863394 | chr1:224553581 | ENST00000465271 | 1 | 5 | 5_25 | 46.0 | 140.0 | Transmembrane | Helical |
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Fusion Gene Sequence for ERBB2-CNIH4 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000584601_ENST00000465271_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(transcript)=4844nt_BP=932nt AGTACGCAGTCGCGGTACACCGGCTCACGGTCGCCCTGGGAGCCGCTCGCCAGCGCCGCTGCCCCAGCTAGCAGGACCAACCGCGCCGCC AGGCCGGCCATCCTTTCTCCCTGGCTCGCCGCCGGGGGAGGAGCTTAGGAGTATGAAGCTTCCACTTCCGGAGTAACCGGAAGTTCCTGT GTTCTTTATTCTACTCTCCGCTGAAGTCCACACAGTTTAAATTAAAGTTCCCGGATTTTTGTGGGCGCCTGCCCCGCCCCTCGTCCCCCT GCTGTGTCCATATATCGAGGCGATAGGGTTAAGGGAAGGCGGACGCCTGATGGGTTAATGAGCAAACTGAAGTGTTTTCCATGATCTTTT TTGAGTCGCAATTGAAGTACCACCTCCCGAGGGTGATTGCTTCCCCATGCGGGGTAGAACCTTTGCTGTCCTGTTCACCACTCTACCTCC AGCACAGAATTTGGCTTATGCCTACTCAATGTGAAGATGATGAGGATGAAAACCTTTGTGATGATCCACTTCCACTTAATGAATGGTGGC AAAGCAAAGCTATATTCAAGACCACATGCAAAGCTACTCCCTGAGCAAAGAGTCACAGATAAAACGGGGGCACCAGTAGAATGGCCAGGA CAAACGCAGTGCAGCACAGAGACTCAGACCCTGGCAGCCATGCCTGCGCAGGCAGTGATGAGAGTGACATGTACTGTTGTGGACATGCAC AAAAGTGAGATACTTCAAAGATTCCAGAAGATATGCCCCGGGGGTCCTGGAAGCCACAAGTGTGCACCGGCACAGACATGAAGCTGCGGC TCCCTGCCAGTCCCGAGACCCACCTGGACATGCTCCGCCACCTCTACCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACTCACCTACC TGCCCACCAATGCCAGCCTGTCCTTCCTGCAGTGGGTAATTCCAGAATTGATTGGCCATACCATTGTCACTGTATTACTGCTCATGTCAT TGCACTGGTTCATCTTCCTTCTCAACTTACCTGTTGCCACTTGGAATATATATCGATACATTATGGTGCCGAGTGGTAACATGGGAGTGT TTGATCCAACAGAAATACACAATCGAGGGCAGCTGAAGTCACACATGAAAGAAGCCATGATCAAGCTTGGTTTCCACTTGCTCTGCTTCT TCATGTATCTTTATAGTATGATCTTAGCTTTGATAAATGACTGAAGCTGGAGAAGCCGTGGTTGAAGTCAGCCTACACTACAGTGCACAG TTGAGGAGCCAGAGACTTCTTAAATCATCCTTAGAACCGTGACCATAGCAGTATATATTTTCCTCTTGGAACAAAAAACTATTTTTGCTG TATTTTTACCATATAAAGTATTTAAAAAACATGAATTGAGTTTCTGTAGATTTCTAGTTCTCAACTTTAGCCTGAACGCCAACACTTGAA GGTGTTTTTCATCCTCTGTATGTTGAAGGTGGTTATTTGTATGTAGGAACAGGACTGCCATCCCAGCTTTGCATGCCAAAGAAATAAAGA ACACACTTTAAAGGGCAAACTGAAGAGATGAGCGAGCAAAGGTGCCCTTCAGGTCTACTGAAAAGTTAGAGTACAAAACAACACTGTTGA TCTGGACAAAAGAAGAAAAATTACCCTTTTTGCTTGTGTTGTGACAACTTCATTTAATATGGTTTAAAGATTTATGAGACTGTCAGCTAA AAGTCTTTTCACAAGAATGTCAACAGAGAATGGCATCTCAAAATATATATATTTCTTTGCACAATTTGTGAAACCTTATAAGCCATTTTC CCCAGGTACAATGTAGTTCCTGCTGATAGAAAGGAAATATTTTGTCAAGAGCTTTCATTTAAAAGCTACTACCTCCACAATCACCCCCAA ACCCAGAAAATCCCCACTGGCTCTTGCCAGTCTGGTTTTCGTATTGCAGTTATTCCAATTGTATTTGATCTCCCTGATAACGTATTTTCA TGGGTTTGGGTAGAAGATGCTAATCAGATTAGAAGCAGGAATAGTTATTTGCTGTCTGTGAAATTGAGCCTTTTGGTGCGCCACGTGGTG CCAGATCAACACTTCTATCCCTCTGCACTGACCACGTTGTGAACTGGGAGACCAAATGCAAGCCATTTCATGGACATAGCAATATACAAC CAAACTCTGTTCCTTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTTAGCTCTGTTTGCCAGCTCTTACAGGGT AAAATAAACCTGGCAATTTATCCTCAGTCCTAGTTTGTGGTTTAATGTTGCTATCTTAAGCACTGGCATTTGGGCAAAACATGACTGTGT TCTGTGGGAGAATCCAAAGGCATTATTCACTCTAGTTGAGATAGAATTGGGTGGCTAAACAGGGTGTGTGGTACCCAAAAGATTAAATGT TACATGTCCTTTTAGTCCTTGACCAGGTCTAGCCTTGGCAGAAGCAAGGGAGCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTT CAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGAAATGGTAGGCAAAGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTC ACAGAAATTGCTCCTTGTGGTAATCTTATATTTCTGTCAGGCACAGGGCCAAGAAGCTGTGTAACAGACATTACTTTGCTTGCATCTCTT TTTCATACCTTTTCCCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTCTTCATGT TCTGCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCTTGCAACTGAGAGATAAGCTACTTAAAGGCGGTAGAGATCTT TTTTTTTTTTTTTTTGAGATGGGGTCTTGCTGTGTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTCAGCTCACTGCAACCTCTGCTTTCT GGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACGGCTAGCTACTCCTGGCTAATTTTTGTATTTTTAGTAGAGAT GGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAACGATCTGCCTGCCTTGGTCTCCCAAAGTGCTGGGATTATAGG TGTGAGCCACTGCGCCTGGCCATGTAGATGACTTTTGACCAAAATGTTTCACCTTCTCATTCAGATATTCTTAGTAACCAAAACAGTGAC TCATGCAGTTGAGAGAGCCTTTGGGCTGTCAGTTTACAGTACATCAGGCTTGCTGAGGCTAAGCAAATCAGAAAGGTGCCATGTTTATAA CAGAGGTCAAAGCTCCTTACTTCTGAAACATTAGCTGTGGTTAAAAACAAAAACTCTTCCTTCTTGTATTGCTTGTCTATCAAAGCCAGG AAAGTGGGGGATCACTGTAGTTAAATTTTTTTTTTTTTTAATTAGAGACAGAGTCTTGCCCTGTCGCCCAAGCTGGAGTGCACTGGCGCA ATCGTGGTACACTGCAGCCTTGAACTCCTGGACTCAAGCAGTCCTCCTGCCTCAGCTTCCCAAGTAGTTGGGAGTAGGTGCACACCACCA TGCCCAGCGAATTTTTTGTAGAGACAGAGGTCTTGCTATGTTGCCTAGGCTGGTATCAAAATTACTGGCCTCAAGCGATTCTCCTGCCTC GGCCTCCCAGATGTTGGGATTACTGGTGTGAGCCACCACGCCCAGCTCAAAAACAATTTTTTTAGGGGCACTTCTACAAATCATGAAAGG GGGATAAAAGCACTGACTTTAAAAAGCCATGTTTAAGATGCTATAAATGTTCTCCCCTTTTCATTGATTGGAGAGTTGTAGAGGACCTTA GAGATCATTTTGTCTAACTCCCTCATCCCAAAGATAAACTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTG AGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCT GAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGG GAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTT GTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCTTAGTCCAGTGTT CTCTCTCCCTTACCACTCCTCTTCCCCTTCCCTCTATAATGGCAGTACCCAGGGCCCGGTCCATAGACTACTATCGAGTGCTCCTATGTG CATCTTAGTACGTATCATTTTCCCTTGCCTTTTTCCTTCTATCCTTTCAGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTG AGAAAGAAGAGGAAGCGAAATCCAAGATGCAGCTCAGTTCATCAAAGCCTAGCAGGTCCCCTCAGCTGCCTTTTCATGCCTGCCACAGAC TACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAAAGCTTCCTATAGTAGTATCTCCCATGGCACTTACCACATTCT ATCTGGTATTACAGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTT >In-frame_ENST00000584601_ENST00000465271_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(amino acids)=153AA_start in transcript=752_stop in transcript=1213 MPRGSWKPQVCTGTDMKLRLPASPETHLDMLRHLYQGCQVVQGNLELTYLPTNASLSFLQWVIPELIGHTIVTVLLLMSLHWFIFLLNLP -------------------------------------------------------------- >In-frame_ENST00000584601_ENST00000366858_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(transcript)=1429nt_BP=932nt AGTACGCAGTCGCGGTACACCGGCTCACGGTCGCCCTGGGAGCCGCTCGCCAGCGCCGCTGCCCCAGCTAGCAGGACCAACCGCGCCGCC AGGCCGGCCATCCTTTCTCCCTGGCTCGCCGCCGGGGGAGGAGCTTAGGAGTATGAAGCTTCCACTTCCGGAGTAACCGGAAGTTCCTGT GTTCTTTATTCTACTCTCCGCTGAAGTCCACACAGTTTAAATTAAAGTTCCCGGATTTTTGTGGGCGCCTGCCCCGCCCCTCGTCCCCCT GCTGTGTCCATATATCGAGGCGATAGGGTTAAGGGAAGGCGGACGCCTGATGGGTTAATGAGCAAACTGAAGTGTTTTCCATGATCTTTT TTGAGTCGCAATTGAAGTACCACCTCCCGAGGGTGATTGCTTCCCCATGCGGGGTAGAACCTTTGCTGTCCTGTTCACCACTCTACCTCC AGCACAGAATTTGGCTTATGCCTACTCAATGTGAAGATGATGAGGATGAAAACCTTTGTGATGATCCACTTCCACTTAATGAATGGTGGC AAAGCAAAGCTATATTCAAGACCACATGCAAAGCTACTCCCTGAGCAAAGAGTCACAGATAAAACGGGGGCACCAGTAGAATGGCCAGGA CAAACGCAGTGCAGCACAGAGACTCAGACCCTGGCAGCCATGCCTGCGCAGGCAGTGATGAGAGTGACATGTACTGTTGTGGACATGCAC AAAAGTGAGATACTTCAAAGATTCCAGAAGATATGCCCCGGGGGTCCTGGAAGCCACAAGTGTGCACCGGCACAGACATGAAGCTGCGGC TCCCTGCCAGTCCCGAGACCCACCTGGACATGCTCCGCCACCTCTACCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACTCACCTACC TGCCCACCAATGCCAGCCTGTCCTTCCTGCAGTGGGTAATTCCAGAATTGATTGGCCATACCATTGTCACTGTATTACTGCTCATGTCAT TGCACTGGTTCATCTTCCTTCTCAACTTACCTGTTGCCACTTGGAATATATATCGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTC GGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGCAGCTCAGTTCATCAAAGCCTAGCAGGTCCCCTCAGCTGCCTTTTCATGCCTGCCA CAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAAAGCTTCCTATAGTAGTATCTCCCATGGCACTTACCAC ATTCTATCTGGTATTACAGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGT >In-frame_ENST00000584601_ENST00000366858_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(amino acids)=115AA_start in transcript=703_stop in transcript=1050 MLWTCTKVRYFKDSRRYAPGVLEATSVHRHRHEAAAPCQSRDPPGHAPPPLPGLPGGAGKPGTHLPAHQCQPVLPAVGNSRIDWPYHCHC -------------------------------------------------------------- >In-frame_ENST00000584601_ENST00000366857_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(transcript)=4703nt_BP=932nt AGTACGCAGTCGCGGTACACCGGCTCACGGTCGCCCTGGGAGCCGCTCGCCAGCGCCGCTGCCCCAGCTAGCAGGACCAACCGCGCCGCC AGGCCGGCCATCCTTTCTCCCTGGCTCGCCGCCGGGGGAGGAGCTTAGGAGTATGAAGCTTCCACTTCCGGAGTAACCGGAAGTTCCTGT GTTCTTTATTCTACTCTCCGCTGAAGTCCACACAGTTTAAATTAAAGTTCCCGGATTTTTGTGGGCGCCTGCCCCGCCCCTCGTCCCCCT GCTGTGTCCATATATCGAGGCGATAGGGTTAAGGGAAGGCGGACGCCTGATGGGTTAATGAGCAAACTGAAGTGTTTTCCATGATCTTTT TTGAGTCGCAATTGAAGTACCACCTCCCGAGGGTGATTGCTTCCCCATGCGGGGTAGAACCTTTGCTGTCCTGTTCACCACTCTACCTCC AGCACAGAATTTGGCTTATGCCTACTCAATGTGAAGATGATGAGGATGAAAACCTTTGTGATGATCCACTTCCACTTAATGAATGGTGGC AAAGCAAAGCTATATTCAAGACCACATGCAAAGCTACTCCCTGAGCAAAGAGTCACAGATAAAACGGGGGCACCAGTAGAATGGCCAGGA CAAACGCAGTGCAGCACAGAGACTCAGACCCTGGCAGCCATGCCTGCGCAGGCAGTGATGAGAGTGACATGTACTGTTGTGGACATGCAC AAAAGTGAGATACTTCAAAGATTCCAGAAGATATGCCCCGGGGGTCCTGGAAGCCACAAGTGTGCACCGGCACAGACATGAAGCTGCGGC TCCCTGCCAGTCCCGAGACCCACCTGGACATGCTCCGCCACCTCTACCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACTCACCTACC TGCCCACCAATGCCAGCCTGTCCTTCCTGCAGTGGGTAATTCCAGAATTGATTGGCCATACCATTGTCACTGTATTACTGCTCATGTCAT TGCACTGGTTCATCTTCCTTCTCAACTTACCTGTTGCCACTTGGAATATATATCGTATGATCTTAGCTTTGATAAATGACTGAAGCTGGA GAAGCCGTGGTTGAAGTCAGCCTACACTACAGTGCACAGTTGAGGAGCCAGAGACTTCTTAAATCATCCTTAGAACCGTGACCATAGCAG TATATATTTTCCTCTTGGAACAAAAAACTATTTTTGCTGTATTTTTACCATATAAAGTATTTAAAAAACATGAATTGAGTTTCTGTAGAT TTCTAGTTCTCAACTTTAGCCTGAACGCCAACACTTGAAGGTGTTTTTCATCCTCTGTATGTTGAAGGTGGTTATTTGTATGTAGGAACA GGACTGCCATCCCAGCTTTGCATGCCAAAGAAATAAAGAACACACTTTAAAGGGCAAACTGAAGAGATGAGCGAGCAAAGGTGCCCTTCA GGTCTACTGAAAAGTTAGAGTACAAAACAACACTGTTGATCTGGACAAAAGAAGAAAAATTACCCTTTTTGCTTGTGTTGTGACAACTTC ATTTAATATGGTTTAAAGATTTATGAGACTGTCAGCTAAAAGTCTTTTCACAAGAATGTCAACAGAGAATGGCATCTCAAAATATATATA TTTCTTTGCACAATTTGTGAAACCTTATAAGCCATTTTCCCCAGGTACAATGTAGTTCCTGCTGATAGAAAGGAAATATTTTGTCAAGAG CTTTCATTTAAAAGCTACTACCTCCACAATCACCCCCAAACCCAGAAAATCCCCACTGGCTCTTGCCAGTCTGGTTTTCGTATTGCAGTT ATTCCAATTGTATTTGATCTCCCTGATAACGTATTTTCATGGGTTTGGGTAGAAGATGCTAATCAGATTAGAAGCAGGAATAGTTATTTG CTGTCTGTGAAATTGAGCCTTTTGGTGCGCCACGTGGTGCCAGATCAACACTTCTATCCCTCTGCACTGACCACGTTGTGAACTGGGAGA CCAAATGCAAGCCATTTCATGGACATAGCAATATACAACCAAACTCTGTTCCTTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCA GTTCACCTCCTTAGCTCTGTTTGCCAGCTCTTACAGGGTAAAATAAACCTGGCAATTTATCCTCAGTCCTAGTTTGTGGTTTAATGTTGC TATCTTAAGCACTGGCATTTGGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCATTATTCACTCTAGTTGAGATAGAATTGGG TGGCTAAACAGGGTGTGTGGTACCCAAAAGATTAAATGTTACATGTCCTTTTAGTCCTTGACCAGGTCTAGCCTTGGCAGAAGCAAGGGA GCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGAAATGGT AGGCAAAGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAATTGCTCCTTGTGGTAATCTTATATTTCTGTCAGGCACAGGGCCA AGAAGCTGTGTAACAGACATTACTTTGCTTGCATCTCTTTTTCATACCTTTTCCCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTC ACTCTGCCTTTCCTCCTAACTTCCTGTGCCTCTTCATGTTCTGCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCTTG CAACTGAGAGATAAGCTACTTAAAGGCGGTAGAGATCTTTTTTTTTTTTTTTTTGAGATGGGGTCTTGCTGTGTTGCCCAGGCTGGAGTG CAGTGGTGTGATCTCAGCTCACTGCAACCTCTGCTTTCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACGGC TAGCTACTCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAACGA TCTGCCTGCCTTGGTCTCCCAAAGTGCTGGGATTATAGGTGTGAGCCACTGCGCCTGGCCATGTAGATGACTTTTGACCAAAATGTTTCA CCTTCTCATTCAGATATTCTTAGTAACCAAAACAGTGACTCATGCAGTTGAGAGAGCCTTTGGGCTGTCAGTTTACAGTACATCAGGCTT GCTGAGGCTAAGCAAATCAGAAAGGTGCCATGTTTATAACAGAGGTCAAAGCTCCTTACTTCTGAAACATTAGCTGTGGTTAAAAACAAA AACTCTTCCTTCTTGTATTGCTTGTCTATCAAAGCCAGGAAAGTGGGGGATCACTGTAGTTAAATTTTTTTTTTTTTTAATTAGAGACAG AGTCTTGCCCTGTCGCCCAAGCTGGAGTGCACTGGCGCAATCGTGGTACACTGCAGCCTTGAACTCCTGGACTCAAGCAGTCCTCCTGCC TCAGCTTCCCAAGTAGTTGGGAGTAGGTGCACACCACCATGCCCAGCGAATTTTTTGTAGAGACAGAGGTCTTGCTATGTTGCCTAGGCT GGTATCAAAATTACTGGCCTCAAGCGATTCTCCTGCCTCGGCCTCCCAGATGTTGGGATTACTGGTGTGAGCCACCACGCCCAGCTCAAA AACAATTTTTTTAGGGGCACTTCTACAAATCATGAAAGGGGGATAAAAGCACTGACTTTAAAAAGCCATGTTTAAGATGCTATAAATGTT CTCCCCTTTTCATTGATTGGAGAGTTGTAGAGGACCTTAGAGATCATTTTGTCTAACTCCCTCATCCCAAAGATAAACTGAGGCCTAGAG ATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAG GCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGA ATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGA ACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGT AACTGGGAACATCTGAATGCTGAGGCTTAGTCCAGTGTTCTCTCTCCCTTACCACTCCTCTTCCCCTTCCCTCTATAATGGCAGTACCCA GGGCCCGGTCCATAGACTACTATCGAGTGCTCCTATGTGCATCTTAGTACGTATCATTTTCCCTTGCCTTTTTCCTTCTATCCTTTCAGT GGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGCAGCTCAGTTCATCAAAGCCTA GCAGGTCCCCTCAGCTGCCTTTTCATGCCTGCCACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAAAGC TTCCTATAGTAGTATCTCCCATGGCACTTACCACATTCTATCTGGTATTACAGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGT TCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCTTGCACACAAACAATAAA >In-frame_ENST00000584601_ENST00000366857_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(amino acids)=121AA_start in transcript=703_stop in transcript=1068 MLWTCTKVRYFKDSRRYAPGVLEATSVHRHRHEAAAPCQSRDPPGHAPPPLPGLPGGAGKPGTHLPAHQCQPVLPAVGNSRIDWPYHCHC -------------------------------------------------------------- >In-frame_ENST00000406381_ENST00000465271_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(transcript)=4557nt_BP=645nt GTTCCCGGATTTTTGTGGGCGCCTGCCCCGCCCCTCGTCCCCCTGCTGTGTCCATATATCGAGGCGATAGGGTTAAGGGAAGGCGGACGC CTGATGGGTTAATGAGCAAACTGAAGTGTTTTCCATGATCTTTTTTGAGTCGCAATTGAAGTACCACCTCCCGAGGGTGATTGCTTCCCC ATGCGGGGTAGAACCTTTGCTGTCCTGTTCACCACTCTACCTCCAGCACAGAATTTGGCTTATGCCAAATCCGAAAATATTGTGACCAGG AACCATTCTGTCCAACTCTTCTATTTCAGGTGGCAAAGCAAAGCTATATTCAAGACCACATGCAAAGCTACTCCCTGAGCAAAGAGTCAC AGATAAAACGGGGGCACCAGTAGAATGGCCAGGACAAACGCAGTGCAGCACAGAGACTCAGACCCTGGCAGCCATGCCTGCGCAGGCAGT GATGAGAGTGACATGTACTGTTGTGGACATGCACAAAAGTGAGTGTGCACCGGCACAGACATGAAGCTGCGGCTCCCTGCCAGTCCCGAG ACCCACCTGGACATGCTCCGCCACCTCTACCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACTCACCTACCTGCCCACCAATGCCAGC CTGTCCTTCCTGCAGTGGGTAATTCCAGAATTGATTGGCCATACCATTGTCACTGTATTACTGCTCATGTCATTGCACTGGTTCATCTTC CTTCTCAACTTACCTGTTGCCACTTGGAATATATATCGATACATTATGGTGCCGAGTGGTAACATGGGAGTGTTTGATCCAACAGAAATA CACAATCGAGGGCAGCTGAAGTCACACATGAAAGAAGCCATGATCAAGCTTGGTTTCCACTTGCTCTGCTTCTTCATGTATCTTTATAGT ATGATCTTAGCTTTGATAAATGACTGAAGCTGGAGAAGCCGTGGTTGAAGTCAGCCTACACTACAGTGCACAGTTGAGGAGCCAGAGACT TCTTAAATCATCCTTAGAACCGTGACCATAGCAGTATATATTTTCCTCTTGGAACAAAAAACTATTTTTGCTGTATTTTTACCATATAAA GTATTTAAAAAACATGAATTGAGTTTCTGTAGATTTCTAGTTCTCAACTTTAGCCTGAACGCCAACACTTGAAGGTGTTTTTCATCCTCT GTATGTTGAAGGTGGTTATTTGTATGTAGGAACAGGACTGCCATCCCAGCTTTGCATGCCAAAGAAATAAAGAACACACTTTAAAGGGCA AACTGAAGAGATGAGCGAGCAAAGGTGCCCTTCAGGTCTACTGAAAAGTTAGAGTACAAAACAACACTGTTGATCTGGACAAAAGAAGAA AAATTACCCTTTTTGCTTGTGTTGTGACAACTTCATTTAATATGGTTTAAAGATTTATGAGACTGTCAGCTAAAAGTCTTTTCACAAGAA TGTCAACAGAGAATGGCATCTCAAAATATATATATTTCTTTGCACAATTTGTGAAACCTTATAAGCCATTTTCCCCAGGTACAATGTAGT TCCTGCTGATAGAAAGGAAATATTTTGTCAAGAGCTTTCATTTAAAAGCTACTACCTCCACAATCACCCCCAAACCCAGAAAATCCCCAC TGGCTCTTGCCAGTCTGGTTTTCGTATTGCAGTTATTCCAATTGTATTTGATCTCCCTGATAACGTATTTTCATGGGTTTGGGTAGAAGA TGCTAATCAGATTAGAAGCAGGAATAGTTATTTGCTGTCTGTGAAATTGAGCCTTTTGGTGCGCCACGTGGTGCCAGATCAACACTTCTA TCCCTCTGCACTGACCACGTTGTGAACTGGGAGACCAAATGCAAGCCATTTCATGGACATAGCAATATACAACCAAACTCTGTTCCTTGG AGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTTAGCTCTGTTTGCCAGCTCTTACAGGGTAAAATAAACCTGGCAAT TTATCCTCAGTCCTAGTTTGTGGTTTAATGTTGCTATCTTAAGCACTGGCATTTGGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAA AGGCATTATTCACTCTAGTTGAGATAGAATTGGGTGGCTAAACAGGGTGTGTGGTACCCAAAAGATTAAATGTTACATGTCCTTTTAGTC CTTGACCAGGTCTAGCCTTGGCAGAAGCAAGGGAGCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAGTG CCCTGGCAACACACAAAAGGAACGGTGAAATGGTAGGCAAAGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAATTGCTCCTTG TGGTAATCTTATATTTCTGTCAGGCACAGGGCCAAGAAGCTGTGTAACAGACATTACTTTGCTTGCATCTCTTTTTCATACCTTTTCCCT CTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTCTTCATGTTCTGCTCAAGCTTTTTA AAGCAACGAAGCTGTTGGAGAACTTAAATCCTTGCAACTGAGAGATAAGCTACTTAAAGGCGGTAGAGATCTTTTTTTTTTTTTTTTTGA GATGGGGTCTTGCTGTGTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTCAGCTCACTGCAACCTCTGCTTTCTGGGTTCAAGCGATTCTC CTGCCTCAGCCTCCCAAGTAGCTGGGATTACGGCTAGCTACTCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTG GCCAGGCTGGTCTCAAACTCCTGACCTCAAACGATCTGCCTGCCTTGGTCTCCCAAAGTGCTGGGATTATAGGTGTGAGCCACTGCGCCT GGCCATGTAGATGACTTTTGACCAAAATGTTTCACCTTCTCATTCAGATATTCTTAGTAACCAAAACAGTGACTCATGCAGTTGAGAGAG CCTTTGGGCTGTCAGTTTACAGTACATCAGGCTTGCTGAGGCTAAGCAAATCAGAAAGGTGCCATGTTTATAACAGAGGTCAAAGCTCCT TACTTCTGAAACATTAGCTGTGGTTAAAAACAAAAACTCTTCCTTCTTGTATTGCTTGTCTATCAAAGCCAGGAAAGTGGGGGATCACTG TAGTTAAATTTTTTTTTTTTTTAATTAGAGACAGAGTCTTGCCCTGTCGCCCAAGCTGGAGTGCACTGGCGCAATCGTGGTACACTGCAG CCTTGAACTCCTGGACTCAAGCAGTCCTCCTGCCTCAGCTTCCCAAGTAGTTGGGAGTAGGTGCACACCACCATGCCCAGCGAATTTTTT GTAGAGACAGAGGTCTTGCTATGTTGCCTAGGCTGGTATCAAAATTACTGGCCTCAAGCGATTCTCCTGCCTCGGCCTCCCAGATGTTGG GATTACTGGTGTGAGCCACCACGCCCAGCTCAAAAACAATTTTTTTAGGGGCACTTCTACAAATCATGAAAGGGGGATAAAAGCACTGAC TTTAAAAAGCCATGTTTAAGATGCTATAAATGTTCTCCCCTTTTCATTGATTGGAGAGTTGTAGAGGACCTTAGAGATCATTTTGTCTAA CTCCCTCATCCCAAAGATAAACTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTC AGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGA GATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGA GGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTG AATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCTTAGTCCAGTGTTCTCTCTCCCTTACCACT CCTCTTCCCCTTCCCTCTATAATGGCAGTACCCAGGGCCCGGTCCATAGACTACTATCGAGTGCTCCTATGTGCATCTTAGTACGTATCA TTTTCCCTTGCCTTTTTCCTTCTATCCTTTCAGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCG AAATCCAAGATGCAGCTCAGTTCATCAAAGCCTAGCAGGTCCCCTCAGCTGCCTTTTCATGCCTGCCACAGACTACAGTAGGACAAAACC TGACCTGGTCTTTGAAGTTAAGAGCTAAGAAAGCTTCCTATAGTAGTATCTCCCATGGCACTTACCACATTCTATCTGGTATTACAGTTA TTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCCTTCTGCTCTTGG >In-frame_ENST00000406381_ENST00000465271_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(amino acids)=138AA_start in transcript=510_stop in transcript=926 MKLRLPASPETHLDMLRHLYQGCQVVQGNLELTYLPTNASLSFLQWVIPELIGHTIVTVLLLMSLHWFIFLLNLPVATWNIYRYIMVPSG -------------------------------------------------------------- >In-frame_ENST00000406381_ENST00000366858_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(transcript)=1142nt_BP=645nt GTTCCCGGATTTTTGTGGGCGCCTGCCCCGCCCCTCGTCCCCCTGCTGTGTCCATATATCGAGGCGATAGGGTTAAGGGAAGGCGGACGC CTGATGGGTTAATGAGCAAACTGAAGTGTTTTCCATGATCTTTTTTGAGTCGCAATTGAAGTACCACCTCCCGAGGGTGATTGCTTCCCC ATGCGGGGTAGAACCTTTGCTGTCCTGTTCACCACTCTACCTCCAGCACAGAATTTGGCTTATGCCAAATCCGAAAATATTGTGACCAGG AACCATTCTGTCCAACTCTTCTATTTCAGGTGGCAAAGCAAAGCTATATTCAAGACCACATGCAAAGCTACTCCCTGAGCAAAGAGTCAC AGATAAAACGGGGGCACCAGTAGAATGGCCAGGACAAACGCAGTGCAGCACAGAGACTCAGACCCTGGCAGCCATGCCTGCGCAGGCAGT GATGAGAGTGACATGTACTGTTGTGGACATGCACAAAAGTGAGTGTGCACCGGCACAGACATGAAGCTGCGGCTCCCTGCCAGTCCCGAG ACCCACCTGGACATGCTCCGCCACCTCTACCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACTCACCTACCTGCCCACCAATGCCAGC CTGTCCTTCCTGCAGTGGGTAATTCCAGAATTGATTGGCCATACCATTGTCACTGTATTACTGCTCATGTCATTGCACTGGTTCATCTTC CTTCTCAACTTACCTGTTGCCACTTGGAATATATATCGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAAGAGG AAGCGAAATCCAAGATGCAGCTCAGTTCATCAAAGCCTAGCAGGTCCCCTCAGCTGCCTTTTCATGCCTGCCACAGACTACAGTAGGACA AAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAAAGCTTCCTATAGTAGTATCTCCCATGGCACTTACCACATTCTATCTGGTATTAC AGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCCTTCTGCT >In-frame_ENST00000406381_ENST00000366858_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(amino acids)=98AA_start in transcript=467_stop in transcript=763 MLWTCTKVSVHRHRHEAAAPCQSRDPPGHAPPPLPGLPGGAGKPGTHLPAHQCQPVLPAVGNSRIDWPYHCHCITAHVIALVHLPSQLTC -------------------------------------------------------------- >In-frame_ENST00000406381_ENST00000366857_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(transcript)=4416nt_BP=645nt GTTCCCGGATTTTTGTGGGCGCCTGCCCCGCCCCTCGTCCCCCTGCTGTGTCCATATATCGAGGCGATAGGGTTAAGGGAAGGCGGACGC CTGATGGGTTAATGAGCAAACTGAAGTGTTTTCCATGATCTTTTTTGAGTCGCAATTGAAGTACCACCTCCCGAGGGTGATTGCTTCCCC ATGCGGGGTAGAACCTTTGCTGTCCTGTTCACCACTCTACCTCCAGCACAGAATTTGGCTTATGCCAAATCCGAAAATATTGTGACCAGG AACCATTCTGTCCAACTCTTCTATTTCAGGTGGCAAAGCAAAGCTATATTCAAGACCACATGCAAAGCTACTCCCTGAGCAAAGAGTCAC AGATAAAACGGGGGCACCAGTAGAATGGCCAGGACAAACGCAGTGCAGCACAGAGACTCAGACCCTGGCAGCCATGCCTGCGCAGGCAGT GATGAGAGTGACATGTACTGTTGTGGACATGCACAAAAGTGAGTGTGCACCGGCACAGACATGAAGCTGCGGCTCCCTGCCAGTCCCGAG ACCCACCTGGACATGCTCCGCCACCTCTACCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACTCACCTACCTGCCCACCAATGCCAGC CTGTCCTTCCTGCAGTGGGTAATTCCAGAATTGATTGGCCATACCATTGTCACTGTATTACTGCTCATGTCATTGCACTGGTTCATCTTC CTTCTCAACTTACCTGTTGCCACTTGGAATATATATCGTATGATCTTAGCTTTGATAAATGACTGAAGCTGGAGAAGCCGTGGTTGAAGT CAGCCTACACTACAGTGCACAGTTGAGGAGCCAGAGACTTCTTAAATCATCCTTAGAACCGTGACCATAGCAGTATATATTTTCCTCTTG GAACAAAAAACTATTTTTGCTGTATTTTTACCATATAAAGTATTTAAAAAACATGAATTGAGTTTCTGTAGATTTCTAGTTCTCAACTTT AGCCTGAACGCCAACACTTGAAGGTGTTTTTCATCCTCTGTATGTTGAAGGTGGTTATTTGTATGTAGGAACAGGACTGCCATCCCAGCT TTGCATGCCAAAGAAATAAAGAACACACTTTAAAGGGCAAACTGAAGAGATGAGCGAGCAAAGGTGCCCTTCAGGTCTACTGAAAAGTTA GAGTACAAAACAACACTGTTGATCTGGACAAAAGAAGAAAAATTACCCTTTTTGCTTGTGTTGTGACAACTTCATTTAATATGGTTTAAA GATTTATGAGACTGTCAGCTAAAAGTCTTTTCACAAGAATGTCAACAGAGAATGGCATCTCAAAATATATATATTTCTTTGCACAATTTG TGAAACCTTATAAGCCATTTTCCCCAGGTACAATGTAGTTCCTGCTGATAGAAAGGAAATATTTTGTCAAGAGCTTTCATTTAAAAGCTA CTACCTCCACAATCACCCCCAAACCCAGAAAATCCCCACTGGCTCTTGCCAGTCTGGTTTTCGTATTGCAGTTATTCCAATTGTATTTGA TCTCCCTGATAACGTATTTTCATGGGTTTGGGTAGAAGATGCTAATCAGATTAGAAGCAGGAATAGTTATTTGCTGTCTGTGAAATTGAG CCTTTTGGTGCGCCACGTGGTGCCAGATCAACACTTCTATCCCTCTGCACTGACCACGTTGTGAACTGGGAGACCAAATGCAAGCCATTT CATGGACATAGCAATATACAACCAAACTCTGTTCCTTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTTAGCTC TGTTTGCCAGCTCTTACAGGGTAAAATAAACCTGGCAATTTATCCTCAGTCCTAGTTTGTGGTTTAATGTTGCTATCTTAAGCACTGGCA TTTGGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCATTATTCACTCTAGTTGAGATAGAATTGGGTGGCTAAACAGGGTGTG TGGTACCCAAAAGATTAAATGTTACATGTCCTTTTAGTCCTTGACCAGGTCTAGCCTTGGCAGAAGCAAGGGAGCCACTAAGCCAAACTC CCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGAAATGGTAGGCAAAGTGAACTTGG CTCTGCTGGCCTCTTTGGGGTCACAGAAATTGCTCCTTGTGGTAATCTTATATTTCTGTCAGGCACAGGGCCAAGAAGCTGTGTAACAGA CATTACTTTGCTTGCATCTCTTTTTCATACCTTTTCCCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCT AACTTCCTGTGCCTCTTCATGTTCTGCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCTTGCAACTGAGAGATAAGCT ACTTAAAGGCGGTAGAGATCTTTTTTTTTTTTTTTTTGAGATGGGGTCTTGCTGTGTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTCAG CTCACTGCAACCTCTGCTTTCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACGGCTAGCTACTCCTGGCTAA TTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAACGATCTGCCTGCCTTGGTCT CCCAAAGTGCTGGGATTATAGGTGTGAGCCACTGCGCCTGGCCATGTAGATGACTTTTGACCAAAATGTTTCACCTTCTCATTCAGATAT TCTTAGTAACCAAAACAGTGACTCATGCAGTTGAGAGAGCCTTTGGGCTGTCAGTTTACAGTACATCAGGCTTGCTGAGGCTAAGCAAAT CAGAAAGGTGCCATGTTTATAACAGAGGTCAAAGCTCCTTACTTCTGAAACATTAGCTGTGGTTAAAAACAAAAACTCTTCCTTCTTGTA TTGCTTGTCTATCAAAGCCAGGAAAGTGGGGGATCACTGTAGTTAAATTTTTTTTTTTTTTAATTAGAGACAGAGTCTTGCCCTGTCGCC CAAGCTGGAGTGCACTGGCGCAATCGTGGTACACTGCAGCCTTGAACTCCTGGACTCAAGCAGTCCTCCTGCCTCAGCTTCCCAAGTAGT TGGGAGTAGGTGCACACCACCATGCCCAGCGAATTTTTTGTAGAGACAGAGGTCTTGCTATGTTGCCTAGGCTGGTATCAAAATTACTGG CCTCAAGCGATTCTCCTGCCTCGGCCTCCCAGATGTTGGGATTACTGGTGTGAGCCACCACGCCCAGCTCAAAAACAATTTTTTTAGGGG CACTTCTACAAATCATGAAAGGGGGATAAAAGCACTGACTTTAAAAAGCCATGTTTAAGATGCTATAAATGTTCTCCCCTTTTCATTGAT TGGAGAGTTGTAGAGGACCTTAGAGATCATTTTGTCTAACTCCCTCATCCCAAAGATAAACTGAGGCCTAGAGATCGTTCAGGGTGTTGT AACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAG GGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGA TCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGG CCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAA TGCTGAGGCTTAGTCCAGTGTTCTCTCTCCCTTACCACTCCTCTTCCCCTTCCCTCTATAATGGCAGTACCCAGGGCCCGGTCCATAGAC TACTATCGAGTGCTCCTATGTGCATCTTAGTACGTATCATTTTCCCTTGCCTTTTTCCTTCTATCCTTTCAGTGGTAGCAACTGCCCTTG CTAATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGCAGCTCAGTTCATCAAAGCCTAGCAGGTCCCCTCAGCTG CCTTTTCATGCCTGCCACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAAAGCTTCCTATAGTAGTATCT CCCATGGCACTTACCACATTCTATCTGGTATTACAGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAGAATA TGCCCATTCATATTTGTATCTTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCTTGCACACAAACAATAAATGATTGTTGAGTGAATA >In-frame_ENST00000406381_ENST00000366857_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(amino acids)=104AA_start in transcript=467_stop in transcript=781 MLWTCTKVSVHRHRHEAAAPCQSRDPPGHAPPPLPGLPGGAGKPGTHLPAHQCQPVLPAVGNSRIDWPYHCHCITAHVIALVHLPSQLTC -------------------------------------------------------------- >In-frame_ENST00000541774_ENST00000465271_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(transcript)=4092nt_BP=180nt ATGCCCCGGGGGTCCTGGAAGCCACAAGTGTGCACCGGCACAGACATGAAGCTGCGGCTCCCTGCCAGTCCCGAGACCCACCTGGACATG CTCCGCCACCTCTACCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACTCACCTACCTGCCCACCAATGCCAGCCTGTCCTTCCTGCAG TGGGTAATTCCAGAATTGATTGGCCATACCATTGTCACTGTATTACTGCTCATGTCATTGCACTGGTTCATCTTCCTTCTCAACTTACCT GTTGCCACTTGGAATATATATCGATACATTATGGTGCCGAGTGGTAACATGGGAGTGTTTGATCCAACAGAAATACACAATCGAGGGCAG CTGAAGTCACACATGAAAGAAGCCATGATCAAGCTTGGTTTCCACTTGCTCTGCTTCTTCATGTATCTTTATAGTATGATCTTAGCTTTG ATAAATGACTGAAGCTGGAGAAGCCGTGGTTGAAGTCAGCCTACACTACAGTGCACAGTTGAGGAGCCAGAGACTTCTTAAATCATCCTT AGAACCGTGACCATAGCAGTATATATTTTCCTCTTGGAACAAAAAACTATTTTTGCTGTATTTTTACCATATAAAGTATTTAAAAAACAT GAATTGAGTTTCTGTAGATTTCTAGTTCTCAACTTTAGCCTGAACGCCAACACTTGAAGGTGTTTTTCATCCTCTGTATGTTGAAGGTGG TTATTTGTATGTAGGAACAGGACTGCCATCCCAGCTTTGCATGCCAAAGAAATAAAGAACACACTTTAAAGGGCAAACTGAAGAGATGAG CGAGCAAAGGTGCCCTTCAGGTCTACTGAAAAGTTAGAGTACAAAACAACACTGTTGATCTGGACAAAAGAAGAAAAATTACCCTTTTTG CTTGTGTTGTGACAACTTCATTTAATATGGTTTAAAGATTTATGAGACTGTCAGCTAAAAGTCTTTTCACAAGAATGTCAACAGAGAATG GCATCTCAAAATATATATATTTCTTTGCACAATTTGTGAAACCTTATAAGCCATTTTCCCCAGGTACAATGTAGTTCCTGCTGATAGAAA GGAAATATTTTGTCAAGAGCTTTCATTTAAAAGCTACTACCTCCACAATCACCCCCAAACCCAGAAAATCCCCACTGGCTCTTGCCAGTC TGGTTTTCGTATTGCAGTTATTCCAATTGTATTTGATCTCCCTGATAACGTATTTTCATGGGTTTGGGTAGAAGATGCTAATCAGATTAG AAGCAGGAATAGTTATTTGCTGTCTGTGAAATTGAGCCTTTTGGTGCGCCACGTGGTGCCAGATCAACACTTCTATCCCTCTGCACTGAC CACGTTGTGAACTGGGAGACCAAATGCAAGCCATTTCATGGACATAGCAATATACAACCAAACTCTGTTCCTTGGAGTTATATTGTAAAC TCTTGCAGGTGGGAGAGCAGTTCACCTCCTTAGCTCTGTTTGCCAGCTCTTACAGGGTAAAATAAACCTGGCAATTTATCCTCAGTCCTA GTTTGTGGTTTAATGTTGCTATCTTAAGCACTGGCATTTGGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCATTATTCACTC TAGTTGAGATAGAATTGGGTGGCTAAACAGGGTGTGTGGTACCCAAAAGATTAAATGTTACATGTCCTTTTAGTCCTTGACCAGGTCTAG CCTTGGCAGAAGCAAGGGAGCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACA AAAGGAACGGTGAAATGGTAGGCAAAGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAATTGCTCCTTGTGGTAATCTTATATT TCTGTCAGGCACAGGGCCAAGAAGCTGTGTAACAGACATTACTTTGCTTGCATCTCTTTTTCATACCTTTTCCCTCTGAGGCAGCTTTTG CTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTCTTCATGTTCTGCTCAAGCTTTTTAAAGCAACGAAGCTGT TGGAGAACTTAAATCCTTGCAACTGAGAGATAAGCTACTTAAAGGCGGTAGAGATCTTTTTTTTTTTTTTTTTGAGATGGGGTCTTGCTG TGTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTCAGCTCACTGCAACCTCTGCTTTCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCC AAGTAGCTGGGATTACGGCTAGCTACTCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCA AACTCCTGACCTCAAACGATCTGCCTGCCTTGGTCTCCCAAAGTGCTGGGATTATAGGTGTGAGCCACTGCGCCTGGCCATGTAGATGAC TTTTGACCAAAATGTTTCACCTTCTCATTCAGATATTCTTAGTAACCAAAACAGTGACTCATGCAGTTGAGAGAGCCTTTGGGCTGTCAG TTTACAGTACATCAGGCTTGCTGAGGCTAAGCAAATCAGAAAGGTGCCATGTTTATAACAGAGGTCAAAGCTCCTTACTTCTGAAACATT AGCTGTGGTTAAAAACAAAAACTCTTCCTTCTTGTATTGCTTGTCTATCAAAGCCAGGAAAGTGGGGGATCACTGTAGTTAAATTTTTTT TTTTTTTAATTAGAGACAGAGTCTTGCCCTGTCGCCCAAGCTGGAGTGCACTGGCGCAATCGTGGTACACTGCAGCCTTGAACTCCTGGA CTCAAGCAGTCCTCCTGCCTCAGCTTCCCAAGTAGTTGGGAGTAGGTGCACACCACCATGCCCAGCGAATTTTTTGTAGAGACAGAGGTC TTGCTATGTTGCCTAGGCTGGTATCAAAATTACTGGCCTCAAGCGATTCTCCTGCCTCGGCCTCCCAGATGTTGGGATTACTGGTGTGAG CCACCACGCCCAGCTCAAAAACAATTTTTTTAGGGGCACTTCTACAAATCATGAAAGGGGGATAAAAGCACTGACTTTAAAAAGCCATGT TTAAGATGCTATAAATGTTCTCCCCTTTTCATTGATTGGAGAGTTGTAGAGGACCTTAGAGATCATTTTGTCTAACTCCCTCATCCCAAA GATAAACTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTG GGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGT TGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTT CAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAG AGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCTTAGTCCAGTGTTCTCTCTCCCTTACCACTCCTCTTCCCCTTCCC TCTATAATGGCAGTACCCAGGGCCCGGTCCATAGACTACTATCGAGTGCTCCTATGTGCATCTTAGTACGTATCATTTTCCCTTGCCTTT TTCCTTCTATCCTTTCAGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGCAG CTCAGTTCATCAAAGCCTAGCAGGTCCCCTCAGCTGCCTTTTCATGCCTGCCACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGA AGTTAAGAGCTAAGAAAGCTTCCTATAGTAGTATCTCCCATGGCACTTACCACATTCTATCTGGTATTACAGTTATTTGTATGCAATTAA TCACTCTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCCTTCTGCTCTTGGCACCTAACACAGTGC >In-frame_ENST00000541774_ENST00000465271_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(amino acids)=153AA_start in transcript=0_stop in transcript=461 MPRGSWKPQVCTGTDMKLRLPASPETHLDMLRHLYQGCQVVQGNLELTYLPTNASLSFLQWVIPELIGHTIVTVLLLMSLHWFIFLLNLP -------------------------------------------------------------- >In-frame_ENST00000541774_ENST00000366858_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(transcript)=677nt_BP=180nt ATGCCCCGGGGGTCCTGGAAGCCACAAGTGTGCACCGGCACAGACATGAAGCTGCGGCTCCCTGCCAGTCCCGAGACCCACCTGGACATG CTCCGCCACCTCTACCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACTCACCTACCTGCCCACCAATGCCAGCCTGTCCTTCCTGCAG TGGGTAATTCCAGAATTGATTGGCCATACCATTGTCACTGTATTACTGCTCATGTCATTGCACTGGTTCATCTTCCTTCTCAACTTACCT GTTGCCACTTGGAATATATATCGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGA TGCAGCTCAGTTCATCAAAGCCTAGCAGGTCCCCTCAGCTGCCTTTTCATGCCTGCCACAGACTACAGTAGGACAAAACCTGACCTGGTC TTTGAAGTTAAGAGCTAAGAAAGCTTCCTATAGTAGTATCTCCCATGGCACTTACCACATTCTATCTGGTATTACAGTTATTTGTATGCA ATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCCTTCTGCTCTTGGCACCTAACAC >In-frame_ENST00000541774_ENST00000366858_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(amino acids)=104AA_start in transcript=0_stop in transcript=314 MPRGSWKPQVCTGTDMKLRLPASPETHLDMLRHLYQGCQVVQGNLELTYLPTNASLSFLQWVIPELIGHTIVTVLLLMSLHWFIFLLNLP -------------------------------------------------------------- >In-frame_ENST00000541774_ENST00000366857_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(transcript)=3951nt_BP=180nt ATGCCCCGGGGGTCCTGGAAGCCACAAGTGTGCACCGGCACAGACATGAAGCTGCGGCTCCCTGCCAGTCCCGAGACCCACCTGGACATG CTCCGCCACCTCTACCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACTCACCTACCTGCCCACCAATGCCAGCCTGTCCTTCCTGCAG TGGGTAATTCCAGAATTGATTGGCCATACCATTGTCACTGTATTACTGCTCATGTCATTGCACTGGTTCATCTTCCTTCTCAACTTACCT GTTGCCACTTGGAATATATATCGTATGATCTTAGCTTTGATAAATGACTGAAGCTGGAGAAGCCGTGGTTGAAGTCAGCCTACACTACAG TGCACAGTTGAGGAGCCAGAGACTTCTTAAATCATCCTTAGAACCGTGACCATAGCAGTATATATTTTCCTCTTGGAACAAAAAACTATT TTTGCTGTATTTTTACCATATAAAGTATTTAAAAAACATGAATTGAGTTTCTGTAGATTTCTAGTTCTCAACTTTAGCCTGAACGCCAAC ACTTGAAGGTGTTTTTCATCCTCTGTATGTTGAAGGTGGTTATTTGTATGTAGGAACAGGACTGCCATCCCAGCTTTGCATGCCAAAGAA ATAAAGAACACACTTTAAAGGGCAAACTGAAGAGATGAGCGAGCAAAGGTGCCCTTCAGGTCTACTGAAAAGTTAGAGTACAAAACAACA CTGTTGATCTGGACAAAAGAAGAAAAATTACCCTTTTTGCTTGTGTTGTGACAACTTCATTTAATATGGTTTAAAGATTTATGAGACTGT CAGCTAAAAGTCTTTTCACAAGAATGTCAACAGAGAATGGCATCTCAAAATATATATATTTCTTTGCACAATTTGTGAAACCTTATAAGC CATTTTCCCCAGGTACAATGTAGTTCCTGCTGATAGAAAGGAAATATTTTGTCAAGAGCTTTCATTTAAAAGCTACTACCTCCACAATCA CCCCCAAACCCAGAAAATCCCCACTGGCTCTTGCCAGTCTGGTTTTCGTATTGCAGTTATTCCAATTGTATTTGATCTCCCTGATAACGT ATTTTCATGGGTTTGGGTAGAAGATGCTAATCAGATTAGAAGCAGGAATAGTTATTTGCTGTCTGTGAAATTGAGCCTTTTGGTGCGCCA CGTGGTGCCAGATCAACACTTCTATCCCTCTGCACTGACCACGTTGTGAACTGGGAGACCAAATGCAAGCCATTTCATGGACATAGCAAT ATACAACCAAACTCTGTTCCTTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTTAGCTCTGTTTGCCAGCTCTT ACAGGGTAAAATAAACCTGGCAATTTATCCTCAGTCCTAGTTTGTGGTTTAATGTTGCTATCTTAAGCACTGGCATTTGGGCAAAACATG ACTGTGTTCTGTGGGAGAATCCAAAGGCATTATTCACTCTAGTTGAGATAGAATTGGGTGGCTAAACAGGGTGTGTGGTACCCAAAAGAT TAAATGTTACATGTCCTTTTAGTCCTTGACCAGGTCTAGCCTTGGCAGAAGCAAGGGAGCCACTAAGCCAAACTCCCTGTGCAGACAGAC CATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGAAATGGTAGGCAAAGTGAACTTGGCTCTGCTGGCCTCTT TGGGGTCACAGAAATTGCTCCTTGTGGTAATCTTATATTTCTGTCAGGCACAGGGCCAAGAAGCTGTGTAACAGACATTACTTTGCTTGC ATCTCTTTTTCATACCTTTTCCCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTC TTCATGTTCTGCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCTTGCAACTGAGAGATAAGCTACTTAAAGGCGGTAG AGATCTTTTTTTTTTTTTTTTTGAGATGGGGTCTTGCTGTGTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTCAGCTCACTGCAACCTCT GCTTTCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACGGCTAGCTACTCCTGGCTAATTTTTGTATTTTTAG TAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAACGATCTGCCTGCCTTGGTCTCCCAAAGTGCTGGGA TTATAGGTGTGAGCCACTGCGCCTGGCCATGTAGATGACTTTTGACCAAAATGTTTCACCTTCTCATTCAGATATTCTTAGTAACCAAAA CAGTGACTCATGCAGTTGAGAGAGCCTTTGGGCTGTCAGTTTACAGTACATCAGGCTTGCTGAGGCTAAGCAAATCAGAAAGGTGCCATG TTTATAACAGAGGTCAAAGCTCCTTACTTCTGAAACATTAGCTGTGGTTAAAAACAAAAACTCTTCCTTCTTGTATTGCTTGTCTATCAA AGCCAGGAAAGTGGGGGATCACTGTAGTTAAATTTTTTTTTTTTTTAATTAGAGACAGAGTCTTGCCCTGTCGCCCAAGCTGGAGTGCAC TGGCGCAATCGTGGTACACTGCAGCCTTGAACTCCTGGACTCAAGCAGTCCTCCTGCCTCAGCTTCCCAAGTAGTTGGGAGTAGGTGCAC ACCACCATGCCCAGCGAATTTTTTGTAGAGACAGAGGTCTTGCTATGTTGCCTAGGCTGGTATCAAAATTACTGGCCTCAAGCGATTCTC CTGCCTCGGCCTCCCAGATGTTGGGATTACTGGTGTGAGCCACCACGCCCAGCTCAAAAACAATTTTTTTAGGGGCACTTCTACAAATCA TGAAAGGGGGATAAAAGCACTGACTTTAAAAAGCCATGTTTAAGATGCTATAAATGTTCTCCCCTTTTCATTGATTGGAGAGTTGTAGAG GACCTTAGAGATCATTTTGTCTAACTCCCTCATCCCAAAGATAAACTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTG AATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGG AACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTG TAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCA GGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCTTAGTC CAGTGTTCTCTCTCCCTTACCACTCCTCTTCCCCTTCCCTCTATAATGGCAGTACCCAGGGCCCGGTCCATAGACTACTATCGAGTGCTC CTATGTGCATCTTAGTACGTATCATTTTCCCTTGCCTTTTTCCTTCTATCCTTTCAGTGGTAGCAACTGCCCTTGCTAATCACCGTAACC TCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGCAGCTCAGTTCATCAAAGCCTAGCAGGTCCCCTCAGCTGCCTTTTCATGCCTGC CACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAAAGCTTCCTATAGTAGTATCTCCCATGGCACTTACC ACATTCTATCTGGTATTACAGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTT >In-frame_ENST00000541774_ENST00000366857_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(amino acids)=106AA_start in transcript=0_stop in transcript=320 MPRGSWKPQVCTGTDMKLRLPASPETHLDMLRHLYQGCQVVQGNLELTYLPTNASLSFLQWVIPELIGHTIVTVLLLMSLHWFIFLLNLP -------------------------------------------------------------- >In-frame_ENST00000540147_ENST00000465271_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(transcript)=4375nt_BP=463nt GGAGGAGGTGGAGGAGGAGGGCTGCTTGAGGAAGTATAAGAATGAAGTTGTGAAGCTGAGATTCCCCTCCATTGGGACCGGAGAAACCAG GGGAGCCCCCCGGGCAGCCGCGCGCCCCTTCCCACGGGGCCCTTTACTGCGCCGCGCGCCCGGCCCCCACCCCTCGCAGCACCCCGCGCC CCGCGCCCTCCCAGCCGGGTCCAGCCGGAGCCATGGGGCCGGAGCCGCAGTGAGCACCATGGAGCTGGCGGCCTTGTGCCGCTGGGGGCT CCTCCTCGCCCTCTTGCCCCCCGGAGCCGCGAGCACCCAAGTGTGCACCGGCACAGACATGAAGCTGCGGCTCCCTGCCAGTCCCGAGAC CCACCTGGACATGCTCCGCCACCTCTACCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACTCACCTACCTGCCCACCAATGCCAGCCT GTCCTTCCTGCAGTGGGTAATTCCAGAATTGATTGGCCATACCATTGTCACTGTATTACTGCTCATGTCATTGCACTGGTTCATCTTCCT TCTCAACTTACCTGTTGCCACTTGGAATATATATCGATACATTATGGTGCCGAGTGGTAACATGGGAGTGTTTGATCCAACAGAAATACA CAATCGAGGGCAGCTGAAGTCACACATGAAAGAAGCCATGATCAAGCTTGGTTTCCACTTGCTCTGCTTCTTCATGTATCTTTATAGTAT GATCTTAGCTTTGATAAATGACTGAAGCTGGAGAAGCCGTGGTTGAAGTCAGCCTACACTACAGTGCACAGTTGAGGAGCCAGAGACTTC TTAAATCATCCTTAGAACCGTGACCATAGCAGTATATATTTTCCTCTTGGAACAAAAAACTATTTTTGCTGTATTTTTACCATATAAAGT ATTTAAAAAACATGAATTGAGTTTCTGTAGATTTCTAGTTCTCAACTTTAGCCTGAACGCCAACACTTGAAGGTGTTTTTCATCCTCTGT ATGTTGAAGGTGGTTATTTGTATGTAGGAACAGGACTGCCATCCCAGCTTTGCATGCCAAAGAAATAAAGAACACACTTTAAAGGGCAAA CTGAAGAGATGAGCGAGCAAAGGTGCCCTTCAGGTCTACTGAAAAGTTAGAGTACAAAACAACACTGTTGATCTGGACAAAAGAAGAAAA ATTACCCTTTTTGCTTGTGTTGTGACAACTTCATTTAATATGGTTTAAAGATTTATGAGACTGTCAGCTAAAAGTCTTTTCACAAGAATG TCAACAGAGAATGGCATCTCAAAATATATATATTTCTTTGCACAATTTGTGAAACCTTATAAGCCATTTTCCCCAGGTACAATGTAGTTC CTGCTGATAGAAAGGAAATATTTTGTCAAGAGCTTTCATTTAAAAGCTACTACCTCCACAATCACCCCCAAACCCAGAAAATCCCCACTG GCTCTTGCCAGTCTGGTTTTCGTATTGCAGTTATTCCAATTGTATTTGATCTCCCTGATAACGTATTTTCATGGGTTTGGGTAGAAGATG CTAATCAGATTAGAAGCAGGAATAGTTATTTGCTGTCTGTGAAATTGAGCCTTTTGGTGCGCCACGTGGTGCCAGATCAACACTTCTATC CCTCTGCACTGACCACGTTGTGAACTGGGAGACCAAATGCAAGCCATTTCATGGACATAGCAATATACAACCAAACTCTGTTCCTTGGAG TTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTTAGCTCTGTTTGCCAGCTCTTACAGGGTAAAATAAACCTGGCAATTT ATCCTCAGTCCTAGTTTGTGGTTTAATGTTGCTATCTTAAGCACTGGCATTTGGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAG GCATTATTCACTCTAGTTGAGATAGAATTGGGTGGCTAAACAGGGTGTGTGGTACCCAAAAGATTAAATGTTACATGTCCTTTTAGTCCT TGACCAGGTCTAGCCTTGGCAGAAGCAAGGGAGCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAGTGCC CTGGCAACACACAAAAGGAACGGTGAAATGGTAGGCAAAGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAATTGCTCCTTGTG GTAATCTTATATTTCTGTCAGGCACAGGGCCAAGAAGCTGTGTAACAGACATTACTTTGCTTGCATCTCTTTTTCATACCTTTTCCCTCT GAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTCTTCATGTTCTGCTCAAGCTTTTTAAA GCAACGAAGCTGTTGGAGAACTTAAATCCTTGCAACTGAGAGATAAGCTACTTAAAGGCGGTAGAGATCTTTTTTTTTTTTTTTTTGAGA TGGGGTCTTGCTGTGTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTCAGCTCACTGCAACCTCTGCTTTCTGGGTTCAAGCGATTCTCCT GCCTCAGCCTCCCAAGTAGCTGGGATTACGGCTAGCTACTCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGC CAGGCTGGTCTCAAACTCCTGACCTCAAACGATCTGCCTGCCTTGGTCTCCCAAAGTGCTGGGATTATAGGTGTGAGCCACTGCGCCTGG CCATGTAGATGACTTTTGACCAAAATGTTTCACCTTCTCATTCAGATATTCTTAGTAACCAAAACAGTGACTCATGCAGTTGAGAGAGCC TTTGGGCTGTCAGTTTACAGTACATCAGGCTTGCTGAGGCTAAGCAAATCAGAAAGGTGCCATGTTTATAACAGAGGTCAAAGCTCCTTA CTTCTGAAACATTAGCTGTGGTTAAAAACAAAAACTCTTCCTTCTTGTATTGCTTGTCTATCAAAGCCAGGAAAGTGGGGGATCACTGTA GTTAAATTTTTTTTTTTTTTAATTAGAGACAGAGTCTTGCCCTGTCGCCCAAGCTGGAGTGCACTGGCGCAATCGTGGTACACTGCAGCC TTGAACTCCTGGACTCAAGCAGTCCTCCTGCCTCAGCTTCCCAAGTAGTTGGGAGTAGGTGCACACCACCATGCCCAGCGAATTTTTTGT AGAGACAGAGGTCTTGCTATGTTGCCTAGGCTGGTATCAAAATTACTGGCCTCAAGCGATTCTCCTGCCTCGGCCTCCCAGATGTTGGGA TTACTGGTGTGAGCCACCACGCCCAGCTCAAAAACAATTTTTTTAGGGGCACTTCTACAAATCATGAAAGGGGGATAAAAGCACTGACTT TAAAAAGCCATGTTTAAGATGCTATAAATGTTCTCCCCTTTTCATTGATTGGAGAGTTGTAGAGGACCTTAGAGATCATTTTGTCTAACT CCCTCATCCCAAAGATAAACTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAG GGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGA TCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGG CCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAA TGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCTTAGTCCAGTGTTCTCTCTCCCTTACCACTCC TCTTCCCCTTCCCTCTATAATGGCAGTACCCAGGGCCCGGTCCATAGACTACTATCGAGTGCTCCTATGTGCATCTTAGTACGTATCATT TTCCCTTGCCTTTTTCCTTCTATCCTTTCAGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAA ATCCAAGATGCAGCTCAGTTCATCAAAGCCTAGCAGGTCCCCTCAGCTGCCTTTTCATGCCTGCCACAGACTACAGTAGGACAAAACCTG ACCTGGTCTTTGAAGTTAAGAGCTAAGAAAGCTTCCTATAGTAGTATCTCCCATGGCACTTACCACATTCTATCTGGTATTACAGTTATT TGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCCTTCTGCTCTTGGCA >In-frame_ENST00000540147_ENST00000465271_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(amino acids)=239AA_start in transcript=25_stop in transcript=744 MRKYKNEVVKLRFPSIGTGETRGAPRAAARPFPRGPLLRRAPGPHPSQHPAPRALPAGSSRSHGAGAAVSTMELAALCRWGLLLALLPPG AASTQVCTGTDMKLRLPASPETHLDMLRHLYQGCQVVQGNLELTYLPTNASLSFLQWVIPELIGHTIVTVLLLMSLHWFIFLLNLPVATW -------------------------------------------------------------- >In-frame_ENST00000540147_ENST00000366858_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(transcript)=960nt_BP=463nt GGAGGAGGTGGAGGAGGAGGGCTGCTTGAGGAAGTATAAGAATGAAGTTGTGAAGCTGAGATTCCCCTCCATTGGGACCGGAGAAACCAG GGGAGCCCCCCGGGCAGCCGCGCGCCCCTTCCCACGGGGCCCTTTACTGCGCCGCGCGCCCGGCCCCCACCCCTCGCAGCACCCCGCGCC CCGCGCCCTCCCAGCCGGGTCCAGCCGGAGCCATGGGGCCGGAGCCGCAGTGAGCACCATGGAGCTGGCGGCCTTGTGCCGCTGGGGGCT CCTCCTCGCCCTCTTGCCCCCCGGAGCCGCGAGCACCCAAGTGTGCACCGGCACAGACATGAAGCTGCGGCTCCCTGCCAGTCCCGAGAC CCACCTGGACATGCTCCGCCACCTCTACCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACTCACCTACCTGCCCACCAATGCCAGCCT GTCCTTCCTGCAGTGGGTAATTCCAGAATTGATTGGCCATACCATTGTCACTGTATTACTGCTCATGTCATTGCACTGGTTCATCTTCCT TCTCAACTTACCTGTTGCCACTTGGAATATATATCGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAAGAGGAA GCGAAATCCAAGATGCAGCTCAGTTCATCAAAGCCTAGCAGGTCCCCTCAGCTGCCTTTTCATGCCTGCCACAGACTACAGTAGGACAAA ACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAAAGCTTCCTATAGTAGTATCTCCCATGGCACTTACCACATTCTATCTGGTATTACAG TTATTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCCTTCTGCTCT >In-frame_ENST00000540147_ENST00000366858_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(amino acids)=190AA_start in transcript=25_stop in transcript=597 MRKYKNEVVKLRFPSIGTGETRGAPRAAARPFPRGPLLRRAPGPHPSQHPAPRALPAGSSRSHGAGAAVSTMELAALCRWGLLLALLPPG AASTQVCTGTDMKLRLPASPETHLDMLRHLYQGCQVVQGNLELTYLPTNASLSFLQWVIPELIGHTIVTVLLLMSLHWFIFLLNLPVATW -------------------------------------------------------------- >In-frame_ENST00000540147_ENST00000366857_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(transcript)=4234nt_BP=463nt GGAGGAGGTGGAGGAGGAGGGCTGCTTGAGGAAGTATAAGAATGAAGTTGTGAAGCTGAGATTCCCCTCCATTGGGACCGGAGAAACCAG GGGAGCCCCCCGGGCAGCCGCGCGCCCCTTCCCACGGGGCCCTTTACTGCGCCGCGCGCCCGGCCCCCACCCCTCGCAGCACCCCGCGCC CCGCGCCCTCCCAGCCGGGTCCAGCCGGAGCCATGGGGCCGGAGCCGCAGTGAGCACCATGGAGCTGGCGGCCTTGTGCCGCTGGGGGCT CCTCCTCGCCCTCTTGCCCCCCGGAGCCGCGAGCACCCAAGTGTGCACCGGCACAGACATGAAGCTGCGGCTCCCTGCCAGTCCCGAGAC CCACCTGGACATGCTCCGCCACCTCTACCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACTCACCTACCTGCCCACCAATGCCAGCCT GTCCTTCCTGCAGTGGGTAATTCCAGAATTGATTGGCCATACCATTGTCACTGTATTACTGCTCATGTCATTGCACTGGTTCATCTTCCT TCTCAACTTACCTGTTGCCACTTGGAATATATATCGTATGATCTTAGCTTTGATAAATGACTGAAGCTGGAGAAGCCGTGGTTGAAGTCA GCCTACACTACAGTGCACAGTTGAGGAGCCAGAGACTTCTTAAATCATCCTTAGAACCGTGACCATAGCAGTATATATTTTCCTCTTGGA ACAAAAAACTATTTTTGCTGTATTTTTACCATATAAAGTATTTAAAAAACATGAATTGAGTTTCTGTAGATTTCTAGTTCTCAACTTTAG CCTGAACGCCAACACTTGAAGGTGTTTTTCATCCTCTGTATGTTGAAGGTGGTTATTTGTATGTAGGAACAGGACTGCCATCCCAGCTTT GCATGCCAAAGAAATAAAGAACACACTTTAAAGGGCAAACTGAAGAGATGAGCGAGCAAAGGTGCCCTTCAGGTCTACTGAAAAGTTAGA GTACAAAACAACACTGTTGATCTGGACAAAAGAAGAAAAATTACCCTTTTTGCTTGTGTTGTGACAACTTCATTTAATATGGTTTAAAGA TTTATGAGACTGTCAGCTAAAAGTCTTTTCACAAGAATGTCAACAGAGAATGGCATCTCAAAATATATATATTTCTTTGCACAATTTGTG AAACCTTATAAGCCATTTTCCCCAGGTACAATGTAGTTCCTGCTGATAGAAAGGAAATATTTTGTCAAGAGCTTTCATTTAAAAGCTACT ACCTCCACAATCACCCCCAAACCCAGAAAATCCCCACTGGCTCTTGCCAGTCTGGTTTTCGTATTGCAGTTATTCCAATTGTATTTGATC TCCCTGATAACGTATTTTCATGGGTTTGGGTAGAAGATGCTAATCAGATTAGAAGCAGGAATAGTTATTTGCTGTCTGTGAAATTGAGCC TTTTGGTGCGCCACGTGGTGCCAGATCAACACTTCTATCCCTCTGCACTGACCACGTTGTGAACTGGGAGACCAAATGCAAGCCATTTCA TGGACATAGCAATATACAACCAAACTCTGTTCCTTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTTAGCTCTG TTTGCCAGCTCTTACAGGGTAAAATAAACCTGGCAATTTATCCTCAGTCCTAGTTTGTGGTTTAATGTTGCTATCTTAAGCACTGGCATT TGGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCATTATTCACTCTAGTTGAGATAGAATTGGGTGGCTAAACAGGGTGTGTG GTACCCAAAAGATTAAATGTTACATGTCCTTTTAGTCCTTGACCAGGTCTAGCCTTGGCAGAAGCAAGGGAGCCACTAAGCCAAACTCCC TGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGAAATGGTAGGCAAAGTGAACTTGGCT CTGCTGGCCTCTTTGGGGTCACAGAAATTGCTCCTTGTGGTAATCTTATATTTCTGTCAGGCACAGGGCCAAGAAGCTGTGTAACAGACA TTACTTTGCTTGCATCTCTTTTTCATACCTTTTCCCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCTAA CTTCCTGTGCCTCTTCATGTTCTGCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCTTGCAACTGAGAGATAAGCTAC TTAAAGGCGGTAGAGATCTTTTTTTTTTTTTTTTTGAGATGGGGTCTTGCTGTGTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTCAGCT CACTGCAACCTCTGCTTTCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACGGCTAGCTACTCCTGGCTAATT TTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAACGATCTGCCTGCCTTGGTCTCC CAAAGTGCTGGGATTATAGGTGTGAGCCACTGCGCCTGGCCATGTAGATGACTTTTGACCAAAATGTTTCACCTTCTCATTCAGATATTC TTAGTAACCAAAACAGTGACTCATGCAGTTGAGAGAGCCTTTGGGCTGTCAGTTTACAGTACATCAGGCTTGCTGAGGCTAAGCAAATCA GAAAGGTGCCATGTTTATAACAGAGGTCAAAGCTCCTTACTTCTGAAACATTAGCTGTGGTTAAAAACAAAAACTCTTCCTTCTTGTATT GCTTGTCTATCAAAGCCAGGAAAGTGGGGGATCACTGTAGTTAAATTTTTTTTTTTTTTAATTAGAGACAGAGTCTTGCCCTGTCGCCCA AGCTGGAGTGCACTGGCGCAATCGTGGTACACTGCAGCCTTGAACTCCTGGACTCAAGCAGTCCTCCTGCCTCAGCTTCCCAAGTAGTTG GGAGTAGGTGCACACCACCATGCCCAGCGAATTTTTTGTAGAGACAGAGGTCTTGCTATGTTGCCTAGGCTGGTATCAAAATTACTGGCC TCAAGCGATTCTCCTGCCTCGGCCTCCCAGATGTTGGGATTACTGGTGTGAGCCACCACGCCCAGCTCAAAAACAATTTTTTTAGGGGCA CTTCTACAAATCATGAAAGGGGGATAAAAGCACTGACTTTAAAAAGCCATGTTTAAGATGCTATAAATGTTCTCCCCTTTTCATTGATTG GAGAGTTGTAGAGGACCTTAGAGATCATTTTGTCTAACTCCCTCATCCCAAAGATAAACTGAGGCCTAGAGATCGTTCAGGGTGTTGTAA CTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGG TGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATC GTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCC TAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATG CTGAGGCTTAGTCCAGTGTTCTCTCTCCCTTACCACTCCTCTTCCCCTTCCCTCTATAATGGCAGTACCCAGGGCCCGGTCCATAGACTA CTATCGAGTGCTCCTATGTGCATCTTAGTACGTATCATTTTCCCTTGCCTTTTTCCTTCTATCCTTTCAGTGGTAGCAACTGCCCTTGCT AATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGCAGCTCAGTTCATCAAAGCCTAGCAGGTCCCCTCAGCTGCC TTTTCATGCCTGCCACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAAAGCTTCCTATAGTAGTATCTCC CATGGCACTTACCACATTCTATCTGGTATTACAGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAGAATATG CCCATTCATATTTGTATCTTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCTTGCACACAAACAATAAATGATTGTTGAGTGAATAAG >In-frame_ENST00000540147_ENST00000366857_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(amino acids)=192AA_start in transcript=25_stop in transcript=603 MRKYKNEVVKLRFPSIGTGETRGAPRAAARPFPRGPLLRRAPGPHPSQHPAPRALPAGSSRSHGAGAAVSTMELAALCRWGLLLALLPPG AASTQVCTGTDMKLRLPASPETHLDMLRHLYQGCQVVQGNLELTYLPTNASLSFLQWVIPELIGHTIVTVLLLMSLHWFIFLLNLPVATW -------------------------------------------------------------- >In-frame_ENST00000584450_ENST00000465271_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(transcript)=4352nt_BP=440nt GCTTGAGGAAGTATAAGAATGAAGTTGTGAAGCTGAGATTCCCCTCCATTGGGACCGGAGAAACCAGGGGAGCCCCCCGGGCAGCCGCGC GCCCCTTCCCACGGGGCCCTTTACTGCGCCGCGCGCCCGGCCCCCACCCCTCGCAGCACCCCGCGCCCCGCGCCCTCCCAGCCGGGTCCA GCCGGAGCCATGGGGCCGGAGCCGCAGTGAGCACCATGGAGCTGGCGGCCTTGTGCCGCTGGGGGCTCCTCCTCGCCCTCTTGCCCCCCG GAGCCGCGAGCACCCAAGTGTGCACCGGCACAGACATGAAGCTGCGGCTCCCTGCCAGTCCCGAGACCCACCTGGACATGCTCCGCCACC TCTACCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACTCACCTACCTGCCCACCAATGCCAGCCTGTCCTTCCTGCAGTGGGTAATTC CAGAATTGATTGGCCATACCATTGTCACTGTATTACTGCTCATGTCATTGCACTGGTTCATCTTCCTTCTCAACTTACCTGTTGCCACTT GGAATATATATCGATACATTATGGTGCCGAGTGGTAACATGGGAGTGTTTGATCCAACAGAAATACACAATCGAGGGCAGCTGAAGTCAC ACATGAAAGAAGCCATGATCAAGCTTGGTTTCCACTTGCTCTGCTTCTTCATGTATCTTTATAGTATGATCTTAGCTTTGATAAATGACT GAAGCTGGAGAAGCCGTGGTTGAAGTCAGCCTACACTACAGTGCACAGTTGAGGAGCCAGAGACTTCTTAAATCATCCTTAGAACCGTGA CCATAGCAGTATATATTTTCCTCTTGGAACAAAAAACTATTTTTGCTGTATTTTTACCATATAAAGTATTTAAAAAACATGAATTGAGTT TCTGTAGATTTCTAGTTCTCAACTTTAGCCTGAACGCCAACACTTGAAGGTGTTTTTCATCCTCTGTATGTTGAAGGTGGTTATTTGTAT GTAGGAACAGGACTGCCATCCCAGCTTTGCATGCCAAAGAAATAAAGAACACACTTTAAAGGGCAAACTGAAGAGATGAGCGAGCAAAGG TGCCCTTCAGGTCTACTGAAAAGTTAGAGTACAAAACAACACTGTTGATCTGGACAAAAGAAGAAAAATTACCCTTTTTGCTTGTGTTGT GACAACTTCATTTAATATGGTTTAAAGATTTATGAGACTGTCAGCTAAAAGTCTTTTCACAAGAATGTCAACAGAGAATGGCATCTCAAA ATATATATATTTCTTTGCACAATTTGTGAAACCTTATAAGCCATTTTCCCCAGGTACAATGTAGTTCCTGCTGATAGAAAGGAAATATTT TGTCAAGAGCTTTCATTTAAAAGCTACTACCTCCACAATCACCCCCAAACCCAGAAAATCCCCACTGGCTCTTGCCAGTCTGGTTTTCGT ATTGCAGTTATTCCAATTGTATTTGATCTCCCTGATAACGTATTTTCATGGGTTTGGGTAGAAGATGCTAATCAGATTAGAAGCAGGAAT AGTTATTTGCTGTCTGTGAAATTGAGCCTTTTGGTGCGCCACGTGGTGCCAGATCAACACTTCTATCCCTCTGCACTGACCACGTTGTGA ACTGGGAGACCAAATGCAAGCCATTTCATGGACATAGCAATATACAACCAAACTCTGTTCCTTGGAGTTATATTGTAAACTCTTGCAGGT GGGAGAGCAGTTCACCTCCTTAGCTCTGTTTGCCAGCTCTTACAGGGTAAAATAAACCTGGCAATTTATCCTCAGTCCTAGTTTGTGGTT TAATGTTGCTATCTTAAGCACTGGCATTTGGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCATTATTCACTCTAGTTGAGAT AGAATTGGGTGGCTAAACAGGGTGTGTGGTACCCAAAAGATTAAATGTTACATGTCCTTTTAGTCCTTGACCAGGTCTAGCCTTGGCAGA AGCAAGGGAGCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGG TGAAATGGTAGGCAAAGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAATTGCTCCTTGTGGTAATCTTATATTTCTGTCAGGC ACAGGGCCAAGAAGCTGTGTAACAGACATTACTTTGCTTGCATCTCTTTTTCATACCTTTTCCCTCTGAGGCAGCTTTTGCTTAGAAAAC AGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTCTTCATGTTCTGCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTT AAATCCTTGCAACTGAGAGATAAGCTACTTAAAGGCGGTAGAGATCTTTTTTTTTTTTTTTTTGAGATGGGGTCTTGCTGTGTTGCCCAG GCTGGAGTGCAGTGGTGTGATCTCAGCTCACTGCAACCTCTGCTTTCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGG GATTACGGCTAGCTACTCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGAC CTCAAACGATCTGCCTGCCTTGGTCTCCCAAAGTGCTGGGATTATAGGTGTGAGCCACTGCGCCTGGCCATGTAGATGACTTTTGACCAA AATGTTTCACCTTCTCATTCAGATATTCTTAGTAACCAAAACAGTGACTCATGCAGTTGAGAGAGCCTTTGGGCTGTCAGTTTACAGTAC ATCAGGCTTGCTGAGGCTAAGCAAATCAGAAAGGTGCCATGTTTATAACAGAGGTCAAAGCTCCTTACTTCTGAAACATTAGCTGTGGTT AAAAACAAAAACTCTTCCTTCTTGTATTGCTTGTCTATCAAAGCCAGGAAAGTGGGGGATCACTGTAGTTAAATTTTTTTTTTTTTTAAT TAGAGACAGAGTCTTGCCCTGTCGCCCAAGCTGGAGTGCACTGGCGCAATCGTGGTACACTGCAGCCTTGAACTCCTGGACTCAAGCAGT CCTCCTGCCTCAGCTTCCCAAGTAGTTGGGAGTAGGTGCACACCACCATGCCCAGCGAATTTTTTGTAGAGACAGAGGTCTTGCTATGTT GCCTAGGCTGGTATCAAAATTACTGGCCTCAAGCGATTCTCCTGCCTCGGCCTCCCAGATGTTGGGATTACTGGTGTGAGCCACCACGCC CAGCTCAAAAACAATTTTTTTAGGGGCACTTCTACAAATCATGAAAGGGGGATAAAAGCACTGACTTTAAAAAGCCATGTTTAAGATGCT ATAAATGTTCTCCCCTTTTCATTGATTGGAGAGTTGTAGAGGACCTTAGAGATCATTTTGTCTAACTCCCTCATCCCAAAGATAAACTGA GGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTG AATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGG AACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTG TAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCA GGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCTTAGTCCAGTGTTCTCTCTCCCTTACCACTCCTCTTCCCCTTCCCTCTATAATGG CAGTACCCAGGGCCCGGTCCATAGACTACTATCGAGTGCTCCTATGTGCATCTTAGTACGTATCATTTTCCCTTGCCTTTTTCCTTCTAT CCTTTCAGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGCAGCTCAGTTCAT CAAAGCCTAGCAGGTCCCCTCAGCTGCCTTTTCATGCCTGCCACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGC TAAGAAAGCTTCCTATAGTAGTATCTCCCATGGCACTTACCACATTCTATCTGGTATTACAGTTATTTGTATGCAATTAATCACTCTTAG ATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCTTGCACACA >In-frame_ENST00000584450_ENST00000465271_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(amino acids)=239AA_start in transcript=2_stop in transcript=721 LRKYKNEVVKLRFPSIGTGETRGAPRAAARPFPRGPLLRRAPGPHPSQHPAPRALPAGSSRSHGAGAAVSTMELAALCRWGLLLALLPPG AASTQVCTGTDMKLRLPASPETHLDMLRHLYQGCQVVQGNLELTYLPTNASLSFLQWVIPELIGHTIVTVLLLMSLHWFIFLLNLPVATW -------------------------------------------------------------- >In-frame_ENST00000584450_ENST00000366858_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(transcript)=937nt_BP=440nt GCTTGAGGAAGTATAAGAATGAAGTTGTGAAGCTGAGATTCCCCTCCATTGGGACCGGAGAAACCAGGGGAGCCCCCCGGGCAGCCGCGC GCCCCTTCCCACGGGGCCCTTTACTGCGCCGCGCGCCCGGCCCCCACCCCTCGCAGCACCCCGCGCCCCGCGCCCTCCCAGCCGGGTCCA GCCGGAGCCATGGGGCCGGAGCCGCAGTGAGCACCATGGAGCTGGCGGCCTTGTGCCGCTGGGGGCTCCTCCTCGCCCTCTTGCCCCCCG GAGCCGCGAGCACCCAAGTGTGCACCGGCACAGACATGAAGCTGCGGCTCCCTGCCAGTCCCGAGACCCACCTGGACATGCTCCGCCACC TCTACCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACTCACCTACCTGCCCACCAATGCCAGCCTGTCCTTCCTGCAGTGGGTAATTC CAGAATTGATTGGCCATACCATTGTCACTGTATTACTGCTCATGTCATTGCACTGGTTCATCTTCCTTCTCAACTTACCTGTTGCCACTT GGAATATATATCGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGCAGCTCAG TTCATCAAAGCCTAGCAGGTCCCCTCAGCTGCCTTTTCATGCCTGCCACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTA AGAGCTAAGAAAGCTTCCTATAGTAGTATCTCCCATGGCACTTACCACATTCTATCTGGTATTACAGTTATTTGTATGCAATTAATCACT CTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCTTGC >In-frame_ENST00000584450_ENST00000366858_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(amino acids)=190AA_start in transcript=2_stop in transcript=574 LRKYKNEVVKLRFPSIGTGETRGAPRAAARPFPRGPLLRRAPGPHPSQHPAPRALPAGSSRSHGAGAAVSTMELAALCRWGLLLALLPPG AASTQVCTGTDMKLRLPASPETHLDMLRHLYQGCQVVQGNLELTYLPTNASLSFLQWVIPELIGHTIVTVLLLMSLHWFIFLLNLPVATW -------------------------------------------------------------- >In-frame_ENST00000584450_ENST00000366857_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(transcript)=4211nt_BP=440nt GCTTGAGGAAGTATAAGAATGAAGTTGTGAAGCTGAGATTCCCCTCCATTGGGACCGGAGAAACCAGGGGAGCCCCCCGGGCAGCCGCGC GCCCCTTCCCACGGGGCCCTTTACTGCGCCGCGCGCCCGGCCCCCACCCCTCGCAGCACCCCGCGCCCCGCGCCCTCCCAGCCGGGTCCA GCCGGAGCCATGGGGCCGGAGCCGCAGTGAGCACCATGGAGCTGGCGGCCTTGTGCCGCTGGGGGCTCCTCCTCGCCCTCTTGCCCCCCG GAGCCGCGAGCACCCAAGTGTGCACCGGCACAGACATGAAGCTGCGGCTCCCTGCCAGTCCCGAGACCCACCTGGACATGCTCCGCCACC TCTACCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACTCACCTACCTGCCCACCAATGCCAGCCTGTCCTTCCTGCAGTGGGTAATTC CAGAATTGATTGGCCATACCATTGTCACTGTATTACTGCTCATGTCATTGCACTGGTTCATCTTCCTTCTCAACTTACCTGTTGCCACTT GGAATATATATCGTATGATCTTAGCTTTGATAAATGACTGAAGCTGGAGAAGCCGTGGTTGAAGTCAGCCTACACTACAGTGCACAGTTG AGGAGCCAGAGACTTCTTAAATCATCCTTAGAACCGTGACCATAGCAGTATATATTTTCCTCTTGGAACAAAAAACTATTTTTGCTGTAT TTTTACCATATAAAGTATTTAAAAAACATGAATTGAGTTTCTGTAGATTTCTAGTTCTCAACTTTAGCCTGAACGCCAACACTTGAAGGT GTTTTTCATCCTCTGTATGTTGAAGGTGGTTATTTGTATGTAGGAACAGGACTGCCATCCCAGCTTTGCATGCCAAAGAAATAAAGAACA CACTTTAAAGGGCAAACTGAAGAGATGAGCGAGCAAAGGTGCCCTTCAGGTCTACTGAAAAGTTAGAGTACAAAACAACACTGTTGATCT GGACAAAAGAAGAAAAATTACCCTTTTTGCTTGTGTTGTGACAACTTCATTTAATATGGTTTAAAGATTTATGAGACTGTCAGCTAAAAG TCTTTTCACAAGAATGTCAACAGAGAATGGCATCTCAAAATATATATATTTCTTTGCACAATTTGTGAAACCTTATAAGCCATTTTCCCC AGGTACAATGTAGTTCCTGCTGATAGAAAGGAAATATTTTGTCAAGAGCTTTCATTTAAAAGCTACTACCTCCACAATCACCCCCAAACC CAGAAAATCCCCACTGGCTCTTGCCAGTCTGGTTTTCGTATTGCAGTTATTCCAATTGTATTTGATCTCCCTGATAACGTATTTTCATGG GTTTGGGTAGAAGATGCTAATCAGATTAGAAGCAGGAATAGTTATTTGCTGTCTGTGAAATTGAGCCTTTTGGTGCGCCACGTGGTGCCA GATCAACACTTCTATCCCTCTGCACTGACCACGTTGTGAACTGGGAGACCAAATGCAAGCCATTTCATGGACATAGCAATATACAACCAA ACTCTGTTCCTTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTTAGCTCTGTTTGCCAGCTCTTACAGGGTAAA ATAAACCTGGCAATTTATCCTCAGTCCTAGTTTGTGGTTTAATGTTGCTATCTTAAGCACTGGCATTTGGGCAAAACATGACTGTGTTCT GTGGGAGAATCCAAAGGCATTATTCACTCTAGTTGAGATAGAATTGGGTGGCTAAACAGGGTGTGTGGTACCCAAAAGATTAAATGTTAC ATGTCCTTTTAGTCCTTGACCAGGTCTAGCCTTGGCAGAAGCAAGGGAGCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAA GGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGAAATGGTAGGCAAAGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACA GAAATTGCTCCTTGTGGTAATCTTATATTTCTGTCAGGCACAGGGCCAAGAAGCTGTGTAACAGACATTACTTTGCTTGCATCTCTTTTT CATACCTTTTCCCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTCTTCATGTTCT GCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCTTGCAACTGAGAGATAAGCTACTTAAAGGCGGTAGAGATCTTTTT TTTTTTTTTTTTGAGATGGGGTCTTGCTGTGTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTCAGCTCACTGCAACCTCTGCTTTCTGGG TTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACGGCTAGCTACTCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGG GTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAACGATCTGCCTGCCTTGGTCTCCCAAAGTGCTGGGATTATAGGTGT GAGCCACTGCGCCTGGCCATGTAGATGACTTTTGACCAAAATGTTTCACCTTCTCATTCAGATATTCTTAGTAACCAAAACAGTGACTCA TGCAGTTGAGAGAGCCTTTGGGCTGTCAGTTTACAGTACATCAGGCTTGCTGAGGCTAAGCAAATCAGAAAGGTGCCATGTTTATAACAG AGGTCAAAGCTCCTTACTTCTGAAACATTAGCTGTGGTTAAAAACAAAAACTCTTCCTTCTTGTATTGCTTGTCTATCAAAGCCAGGAAA GTGGGGGATCACTGTAGTTAAATTTTTTTTTTTTTTAATTAGAGACAGAGTCTTGCCCTGTCGCCCAAGCTGGAGTGCACTGGCGCAATC GTGGTACACTGCAGCCTTGAACTCCTGGACTCAAGCAGTCCTCCTGCCTCAGCTTCCCAAGTAGTTGGGAGTAGGTGCACACCACCATGC CCAGCGAATTTTTTGTAGAGACAGAGGTCTTGCTATGTTGCCTAGGCTGGTATCAAAATTACTGGCCTCAAGCGATTCTCCTGCCTCGGC CTCCCAGATGTTGGGATTACTGGTGTGAGCCACCACGCCCAGCTCAAAAACAATTTTTTTAGGGGCACTTCTACAAATCATGAAAGGGGG ATAAAAGCACTGACTTTAAAAAGCCATGTTTAAGATGCTATAAATGTTCTCCCCTTTTCATTGATTGGAGAGTTGTAGAGGACCTTAGAG ATCATTTTGTCTAACTCCCTCATCCCAAAGATAAACTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGG CCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAA TGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAA CATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTA ACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCTTAGTCCAGTGTTCTC TCTCCCTTACCACTCCTCTTCCCCTTCCCTCTATAATGGCAGTACCCAGGGCCCGGTCCATAGACTACTATCGAGTGCTCCTATGTGCAT CTTAGTACGTATCATTTTCCCTTGCCTTTTTCCTTCTATCCTTTCAGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGA AAGAAGAGGAAGCGAAATCCAAGATGCAGCTCAGTTCATCAAAGCCTAGCAGGTCCCCTCAGCTGCCTTTTCATGCCTGCCACAGACTAC AGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAAAGCTTCCTATAGTAGTATCTCCCATGGCACTTACCACATTCTATC TGGTATTACAGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTT >In-frame_ENST00000584450_ENST00000366857_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(amino acids)=192AA_start in transcript=2_stop in transcript=580 LRKYKNEVVKLRFPSIGTGETRGAPRAAARPFPRGPLLRRAPGPHPSQHPAPRALPAGSSRSHGAGAAVSTMELAALCRWGLLLALLPPG AASTQVCTGTDMKLRLPASPETHLDMLRHLYQGCQVVQGNLELTYLPTNASLSFLQWVIPELIGHTIVTVLLLMSLHWFIFLLNLPVATW -------------------------------------------------------------- >In-frame_ENST00000269571_ENST00000465271_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(transcript)=4296nt_BP=384nt GGAGAAACCAGGGGAGCCCCCCGGGCAGCCGCGCGCCCCTTCCCACGGGGCCCTTTACTGCGCCGCGCGCCCGGCCCCCACCCCTCGCAG CACCCCGCGCCCCGCGCCCTCCCAGCCGGGTCCAGCCGGAGCCATGGGGCCGGAGCCGCAGTGAGCACCATGGAGCTGGCGGCCTTGTGC CGCTGGGGGCTCCTCCTCGCCCTCTTGCCCCCCGGAGCCGCGAGCACCCAAGTGTGCACCGGCACAGACATGAAGCTGCGGCTCCCTGCC AGTCCCGAGACCCACCTGGACATGCTCCGCCACCTCTACCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACTCACCTACCTGCCCACC AATGCCAGCCTGTCCTTCCTGCAGTGGGTAATTCCAGAATTGATTGGCCATACCATTGTCACTGTATTACTGCTCATGTCATTGCACTGG TTCATCTTCCTTCTCAACTTACCTGTTGCCACTTGGAATATATATCGATACATTATGGTGCCGAGTGGTAACATGGGAGTGTTTGATCCA ACAGAAATACACAATCGAGGGCAGCTGAAGTCACACATGAAAGAAGCCATGATCAAGCTTGGTTTCCACTTGCTCTGCTTCTTCATGTAT CTTTATAGTATGATCTTAGCTTTGATAAATGACTGAAGCTGGAGAAGCCGTGGTTGAAGTCAGCCTACACTACAGTGCACAGTTGAGGAG CCAGAGACTTCTTAAATCATCCTTAGAACCGTGACCATAGCAGTATATATTTTCCTCTTGGAACAAAAAACTATTTTTGCTGTATTTTTA CCATATAAAGTATTTAAAAAACATGAATTGAGTTTCTGTAGATTTCTAGTTCTCAACTTTAGCCTGAACGCCAACACTTGAAGGTGTTTT TCATCCTCTGTATGTTGAAGGTGGTTATTTGTATGTAGGAACAGGACTGCCATCCCAGCTTTGCATGCCAAAGAAATAAAGAACACACTT TAAAGGGCAAACTGAAGAGATGAGCGAGCAAAGGTGCCCTTCAGGTCTACTGAAAAGTTAGAGTACAAAACAACACTGTTGATCTGGACA AAAGAAGAAAAATTACCCTTTTTGCTTGTGTTGTGACAACTTCATTTAATATGGTTTAAAGATTTATGAGACTGTCAGCTAAAAGTCTTT TCACAAGAATGTCAACAGAGAATGGCATCTCAAAATATATATATTTCTTTGCACAATTTGTGAAACCTTATAAGCCATTTTCCCCAGGTA CAATGTAGTTCCTGCTGATAGAAAGGAAATATTTTGTCAAGAGCTTTCATTTAAAAGCTACTACCTCCACAATCACCCCCAAACCCAGAA AATCCCCACTGGCTCTTGCCAGTCTGGTTTTCGTATTGCAGTTATTCCAATTGTATTTGATCTCCCTGATAACGTATTTTCATGGGTTTG GGTAGAAGATGCTAATCAGATTAGAAGCAGGAATAGTTATTTGCTGTCTGTGAAATTGAGCCTTTTGGTGCGCCACGTGGTGCCAGATCA ACACTTCTATCCCTCTGCACTGACCACGTTGTGAACTGGGAGACCAAATGCAAGCCATTTCATGGACATAGCAATATACAACCAAACTCT GTTCCTTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTTAGCTCTGTTTGCCAGCTCTTACAGGGTAAAATAAA CCTGGCAATTTATCCTCAGTCCTAGTTTGTGGTTTAATGTTGCTATCTTAAGCACTGGCATTTGGGCAAAACATGACTGTGTTCTGTGGG AGAATCCAAAGGCATTATTCACTCTAGTTGAGATAGAATTGGGTGGCTAAACAGGGTGTGTGGTACCCAAAAGATTAAATGTTACATGTC CTTTTAGTCCTTGACCAGGTCTAGCCTTGGCAGAAGCAAGGGAGCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTG GAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGAAATGGTAGGCAAAGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAAT TGCTCCTTGTGGTAATCTTATATTTCTGTCAGGCACAGGGCCAAGAAGCTGTGTAACAGACATTACTTTGCTTGCATCTCTTTTTCATAC CTTTTCCCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTCTTCATGTTCTGCTCA AGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCTTGCAACTGAGAGATAAGCTACTTAAAGGCGGTAGAGATCTTTTTTTTTT TTTTTTTGAGATGGGGTCTTGCTGTGTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTCAGCTCACTGCAACCTCTGCTTTCTGGGTTCAA GCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACGGCTAGCTACTCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTC ACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAACGATCTGCCTGCCTTGGTCTCCCAAAGTGCTGGGATTATAGGTGTGAGCC ACTGCGCCTGGCCATGTAGATGACTTTTGACCAAAATGTTTCACCTTCTCATTCAGATATTCTTAGTAACCAAAACAGTGACTCATGCAG TTGAGAGAGCCTTTGGGCTGTCAGTTTACAGTACATCAGGCTTGCTGAGGCTAAGCAAATCAGAAAGGTGCCATGTTTATAACAGAGGTC AAAGCTCCTTACTTCTGAAACATTAGCTGTGGTTAAAAACAAAAACTCTTCCTTCTTGTATTGCTTGTCTATCAAAGCCAGGAAAGTGGG GGATCACTGTAGTTAAATTTTTTTTTTTTTTAATTAGAGACAGAGTCTTGCCCTGTCGCCCAAGCTGGAGTGCACTGGCGCAATCGTGGT ACACTGCAGCCTTGAACTCCTGGACTCAAGCAGTCCTCCTGCCTCAGCTTCCCAAGTAGTTGGGAGTAGGTGCACACCACCATGCCCAGC GAATTTTTTGTAGAGACAGAGGTCTTGCTATGTTGCCTAGGCTGGTATCAAAATTACTGGCCTCAAGCGATTCTCCTGCCTCGGCCTCCC AGATGTTGGGATTACTGGTGTGAGCCACCACGCCCAGCTCAAAAACAATTTTTTTAGGGGCACTTCTACAAATCATGAAAGGGGGATAAA AGCACTGACTTTAAAAAGCCATGTTTAAGATGCTATAAATGTTCTCCCCTTTTCATTGATTGGAGAGTTGTAGAGGACCTTAGAGATCAT TTTGTCTAACTCCCTCATCCCAAAGATAAACTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAG AGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTG AGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCT GAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGG GAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCTTAGTCCAGTGTTCTCTCTCC CTTACCACTCCTCTTCCCCTTCCCTCTATAATGGCAGTACCCAGGGCCCGGTCCATAGACTACTATCGAGTGCTCCTATGTGCATCTTAG TACGTATCATTTTCCCTTGCCTTTTTCCTTCTATCCTTTCAGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAA GAGGAAGCGAAATCCAAGATGCAGCTCAGTTCATCAAAGCCTAGCAGGTCCCCTCAGCTGCCTTTTCATGCCTGCCACAGACTACAGTAG GACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAAAGCTTCCTATAGTAGTATCTCCCATGGCACTTACCACATTCTATCTGGTA TTACAGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCCTTC >In-frame_ENST00000269571_ENST00000465271_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(amino acids)=202AA_start in transcript=57_stop in transcript=665 MRRAPGPHPSQHPAPRALPAGSSRSHGAGAAVSTMELAALCRWGLLLALLPPGAASTQVCTGTDMKLRLPASPETHLDMLRHLYQGCQVV QGNLELTYLPTNASLSFLQWVIPELIGHTIVTVLLLMSLHWFIFLLNLPVATWNIYRYIMVPSGNMGVFDPTEIHNRGQLKSHMKEAMIK -------------------------------------------------------------- >In-frame_ENST00000269571_ENST00000366858_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(transcript)=881nt_BP=384nt GGAGAAACCAGGGGAGCCCCCCGGGCAGCCGCGCGCCCCTTCCCACGGGGCCCTTTACTGCGCCGCGCGCCCGGCCCCCACCCCTCGCAG CACCCCGCGCCCCGCGCCCTCCCAGCCGGGTCCAGCCGGAGCCATGGGGCCGGAGCCGCAGTGAGCACCATGGAGCTGGCGGCCTTGTGC CGCTGGGGGCTCCTCCTCGCCCTCTTGCCCCCCGGAGCCGCGAGCACCCAAGTGTGCACCGGCACAGACATGAAGCTGCGGCTCCCTGCC AGTCCCGAGACCCACCTGGACATGCTCCGCCACCTCTACCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACTCACCTACCTGCCCACC AATGCCAGCCTGTCCTTCCTGCAGTGGGTAATTCCAGAATTGATTGGCCATACCATTGTCACTGTATTACTGCTCATGTCATTGCACTGG TTCATCTTCCTTCTCAACTTACCTGTTGCCACTTGGAATATATATCGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGA AAGAAGAGGAAGCGAAATCCAAGATGCAGCTCAGTTCATCAAAGCCTAGCAGGTCCCCTCAGCTGCCTTTTCATGCCTGCCACAGACTAC AGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAAAGCTTCCTATAGTAGTATCTCCCATGGCACTTACCACATTCTATC TGGTATTACAGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTT >In-frame_ENST00000269571_ENST00000366858_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(amino acids)=153AA_start in transcript=57_stop in transcript=518 MRRAPGPHPSQHPAPRALPAGSSRSHGAGAAVSTMELAALCRWGLLLALLPPGAASTQVCTGTDMKLRLPASPETHLDMLRHLYQGCQVV -------------------------------------------------------------- >In-frame_ENST00000269571_ENST00000366857_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(transcript)=4155nt_BP=384nt GGAGAAACCAGGGGAGCCCCCCGGGCAGCCGCGCGCCCCTTCCCACGGGGCCCTTTACTGCGCCGCGCGCCCGGCCCCCACCCCTCGCAG CACCCCGCGCCCCGCGCCCTCCCAGCCGGGTCCAGCCGGAGCCATGGGGCCGGAGCCGCAGTGAGCACCATGGAGCTGGCGGCCTTGTGC CGCTGGGGGCTCCTCCTCGCCCTCTTGCCCCCCGGAGCCGCGAGCACCCAAGTGTGCACCGGCACAGACATGAAGCTGCGGCTCCCTGCC AGTCCCGAGACCCACCTGGACATGCTCCGCCACCTCTACCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACTCACCTACCTGCCCACC AATGCCAGCCTGTCCTTCCTGCAGTGGGTAATTCCAGAATTGATTGGCCATACCATTGTCACTGTATTACTGCTCATGTCATTGCACTGG TTCATCTTCCTTCTCAACTTACCTGTTGCCACTTGGAATATATATCGTATGATCTTAGCTTTGATAAATGACTGAAGCTGGAGAAGCCGT GGTTGAAGTCAGCCTACACTACAGTGCACAGTTGAGGAGCCAGAGACTTCTTAAATCATCCTTAGAACCGTGACCATAGCAGTATATATT TTCCTCTTGGAACAAAAAACTATTTTTGCTGTATTTTTACCATATAAAGTATTTAAAAAACATGAATTGAGTTTCTGTAGATTTCTAGTT CTCAACTTTAGCCTGAACGCCAACACTTGAAGGTGTTTTTCATCCTCTGTATGTTGAAGGTGGTTATTTGTATGTAGGAACAGGACTGCC ATCCCAGCTTTGCATGCCAAAGAAATAAAGAACACACTTTAAAGGGCAAACTGAAGAGATGAGCGAGCAAAGGTGCCCTTCAGGTCTACT GAAAAGTTAGAGTACAAAACAACACTGTTGATCTGGACAAAAGAAGAAAAATTACCCTTTTTGCTTGTGTTGTGACAACTTCATTTAATA TGGTTTAAAGATTTATGAGACTGTCAGCTAAAAGTCTTTTCACAAGAATGTCAACAGAGAATGGCATCTCAAAATATATATATTTCTTTG CACAATTTGTGAAACCTTATAAGCCATTTTCCCCAGGTACAATGTAGTTCCTGCTGATAGAAAGGAAATATTTTGTCAAGAGCTTTCATT TAAAAGCTACTACCTCCACAATCACCCCCAAACCCAGAAAATCCCCACTGGCTCTTGCCAGTCTGGTTTTCGTATTGCAGTTATTCCAAT TGTATTTGATCTCCCTGATAACGTATTTTCATGGGTTTGGGTAGAAGATGCTAATCAGATTAGAAGCAGGAATAGTTATTTGCTGTCTGT GAAATTGAGCCTTTTGGTGCGCCACGTGGTGCCAGATCAACACTTCTATCCCTCTGCACTGACCACGTTGTGAACTGGGAGACCAAATGC AAGCCATTTCATGGACATAGCAATATACAACCAAACTCTGTTCCTTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCT CCTTAGCTCTGTTTGCCAGCTCTTACAGGGTAAAATAAACCTGGCAATTTATCCTCAGTCCTAGTTTGTGGTTTAATGTTGCTATCTTAA GCACTGGCATTTGGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCATTATTCACTCTAGTTGAGATAGAATTGGGTGGCTAAA CAGGGTGTGTGGTACCCAAAAGATTAAATGTTACATGTCCTTTTAGTCCTTGACCAGGTCTAGCCTTGGCAGAAGCAAGGGAGCCACTAA GCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGAAATGGTAGGCAAAG TGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAATTGCTCCTTGTGGTAATCTTATATTTCTGTCAGGCACAGGGCCAAGAAGCTG TGTAACAGACATTACTTTGCTTGCATCTCTTTTTCATACCTTTTCCCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCC TTTCCTCCTAACTTCCTGTGCCTCTTCATGTTCTGCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCTTGCAACTGAG AGATAAGCTACTTAAAGGCGGTAGAGATCTTTTTTTTTTTTTTTTTGAGATGGGGTCTTGCTGTGTTGCCCAGGCTGGAGTGCAGTGGTG TGATCTCAGCTCACTGCAACCTCTGCTTTCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACGGCTAGCTACT CCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAACGATCTGCCTG CCTTGGTCTCCCAAAGTGCTGGGATTATAGGTGTGAGCCACTGCGCCTGGCCATGTAGATGACTTTTGACCAAAATGTTTCACCTTCTCA TTCAGATATTCTTAGTAACCAAAACAGTGACTCATGCAGTTGAGAGAGCCTTTGGGCTGTCAGTTTACAGTACATCAGGCTTGCTGAGGC TAAGCAAATCAGAAAGGTGCCATGTTTATAACAGAGGTCAAAGCTCCTTACTTCTGAAACATTAGCTGTGGTTAAAAACAAAAACTCTTC CTTCTTGTATTGCTTGTCTATCAAAGCCAGGAAAGTGGGGGATCACTGTAGTTAAATTTTTTTTTTTTTTAATTAGAGACAGAGTCTTGC CCTGTCGCCCAAGCTGGAGTGCACTGGCGCAATCGTGGTACACTGCAGCCTTGAACTCCTGGACTCAAGCAGTCCTCCTGCCTCAGCTTC CCAAGTAGTTGGGAGTAGGTGCACACCACCATGCCCAGCGAATTTTTTGTAGAGACAGAGGTCTTGCTATGTTGCCTAGGCTGGTATCAA AATTACTGGCCTCAAGCGATTCTCCTGCCTCGGCCTCCCAGATGTTGGGATTACTGGTGTGAGCCACCACGCCCAGCTCAAAAACAATTT TTTTAGGGGCACTTCTACAAATCATGAAAGGGGGATAAAAGCACTGACTTTAAAAAGCCATGTTTAAGATGCTATAAATGTTCTCCCCTT TTCATTGATTGGAGAGTTGTAGAGGACCTTAGAGATCATTTTGTCTAACTCCCTCATCCCAAAGATAAACTGAGGCCTAGAGATCGTTCA GGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAG ATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAG GCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGA ATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGA ACATCTGAATGCTGAGGCTTAGTCCAGTGTTCTCTCTCCCTTACCACTCCTCTTCCCCTTCCCTCTATAATGGCAGTACCCAGGGCCCGG TCCATAGACTACTATCGAGTGCTCCTATGTGCATCTTAGTACGTATCATTTTCCCTTGCCTTTTTCCTTCTATCCTTTCAGTGGTAGCAA CTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGCAGCTCAGTTCATCAAAGCCTAGCAGGTCC CCTCAGCTGCCTTTTCATGCCTGCCACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAAAGCTTCCTATA GTAGTATCTCCCATGGCACTTACCACATTCTATCTGGTATTACAGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAG GGCAGAATATGCCCATTCATATTTGTATCTTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCTTGCACACAAACAATAAATGATTGTT >In-frame_ENST00000269571_ENST00000366857_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(amino acids)=155AA_start in transcript=57_stop in transcript=524 MRRAPGPHPSQHPAPRALPAGSSRSHGAGAAVSTMELAALCRWGLLLALLPPGAASTQVCTGTDMKLRLPASPETHLDMLRHLYQGCQVV -------------------------------------------------------------- >In-frame_ENST00000578199_ENST00000465271_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(transcript)=4588nt_BP=676nt GTCCACACAGTTTAAATTAAAGTTCCCGGATTTTTGTGGGCGCCTGCCCCGCCCCTCGTCCCCCTGCTGTGTCCATATATCGAGGCGATA GGGTTAAGGGAAGGCGGACGCCTGATGGGTTAATGAGCAAACTGAAGTGTTTTCCATGATCTTTTTTGAGTCGCAATTGAAGTACCACCT CCCGAGGGTGATTGCTTCCCCATGCGGGGTAGAACCTTTGCTGTCCTGTTCACCACTCTACCTCCAGCACAGAATTTGGCTTATGCCTAC TCAATGTGAAGATGATGAGGATGAAAACCTTTGTGATGATCCACTTCCACTTAATGAATGGTGGCAAAGCAAAGCTATATTCAAGACCAC ATGCAAAGCTACTCCCTGAGCAAAGAGTCACAGATAAAACGGGGGCACCAGTAGAATGGCCAGGACAAACGCAGTGCAGCACAGAGACTC AGACCCTGGCAGCCATGCCTGCGCAGGCAGTGATGAGAGTGACATGTACTGTTGTGGACATGCACAAAAGTGAGTGTGCACCGGCACAGA CATGAAGCTGCGGCTCCCTGCCAGTCCCGAGACCCACCTGGACATGCTCCGCCACCTCTACCAGGGCTGCCAGGTGGTGCAGGGAAACCT GGAACTCACCTACCTGCCCACCAATGCCAGCCTGTCCTTCCTGCAGTGGGTAATTCCAGAATTGATTGGCCATACCATTGTCACTGTATT ACTGCTCATGTCATTGCACTGGTTCATCTTCCTTCTCAACTTACCTGTTGCCACTTGGAATATATATCGATACATTATGGTGCCGAGTGG TAACATGGGAGTGTTTGATCCAACAGAAATACACAATCGAGGGCAGCTGAAGTCACACATGAAAGAAGCCATGATCAAGCTTGGTTTCCA CTTGCTCTGCTTCTTCATGTATCTTTATAGTATGATCTTAGCTTTGATAAATGACTGAAGCTGGAGAAGCCGTGGTTGAAGTCAGCCTAC ACTACAGTGCACAGTTGAGGAGCCAGAGACTTCTTAAATCATCCTTAGAACCGTGACCATAGCAGTATATATTTTCCTCTTGGAACAAAA AACTATTTTTGCTGTATTTTTACCATATAAAGTATTTAAAAAACATGAATTGAGTTTCTGTAGATTTCTAGTTCTCAACTTTAGCCTGAA CGCCAACACTTGAAGGTGTTTTTCATCCTCTGTATGTTGAAGGTGGTTATTTGTATGTAGGAACAGGACTGCCATCCCAGCTTTGCATGC CAAAGAAATAAAGAACACACTTTAAAGGGCAAACTGAAGAGATGAGCGAGCAAAGGTGCCCTTCAGGTCTACTGAAAAGTTAGAGTACAA AACAACACTGTTGATCTGGACAAAAGAAGAAAAATTACCCTTTTTGCTTGTGTTGTGACAACTTCATTTAATATGGTTTAAAGATTTATG AGACTGTCAGCTAAAAGTCTTTTCACAAGAATGTCAACAGAGAATGGCATCTCAAAATATATATATTTCTTTGCACAATTTGTGAAACCT TATAAGCCATTTTCCCCAGGTACAATGTAGTTCCTGCTGATAGAAAGGAAATATTTTGTCAAGAGCTTTCATTTAAAAGCTACTACCTCC ACAATCACCCCCAAACCCAGAAAATCCCCACTGGCTCTTGCCAGTCTGGTTTTCGTATTGCAGTTATTCCAATTGTATTTGATCTCCCTG ATAACGTATTTTCATGGGTTTGGGTAGAAGATGCTAATCAGATTAGAAGCAGGAATAGTTATTTGCTGTCTGTGAAATTGAGCCTTTTGG TGCGCCACGTGGTGCCAGATCAACACTTCTATCCCTCTGCACTGACCACGTTGTGAACTGGGAGACCAAATGCAAGCCATTTCATGGACA TAGCAATATACAACCAAACTCTGTTCCTTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTTAGCTCTGTTTGCC AGCTCTTACAGGGTAAAATAAACCTGGCAATTTATCCTCAGTCCTAGTTTGTGGTTTAATGTTGCTATCTTAAGCACTGGCATTTGGGCA AAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCATTATTCACTCTAGTTGAGATAGAATTGGGTGGCTAAACAGGGTGTGTGGTACCC AAAAGATTAAATGTTACATGTCCTTTTAGTCCTTGACCAGGTCTAGCCTTGGCAGAAGCAAGGGAGCCACTAAGCCAAACTCCCTGTGCA GACAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGAAATGGTAGGCAAAGTGAACTTGGCTCTGCTG GCCTCTTTGGGGTCACAGAAATTGCTCCTTGTGGTAATCTTATATTTCTGTCAGGCACAGGGCCAAGAAGCTGTGTAACAGACATTACTT TGCTTGCATCTCTTTTTCATACCTTTTCCCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCT GTGCCTCTTCATGTTCTGCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCTTGCAACTGAGAGATAAGCTACTTAAAG GCGGTAGAGATCTTTTTTTTTTTTTTTTTGAGATGGGGTCTTGCTGTGTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTCAGCTCACTGC AACCTCTGCTTTCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACGGCTAGCTACTCCTGGCTAATTTTTGTA TTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAACGATCTGCCTGCCTTGGTCTCCCAAAGT GCTGGGATTATAGGTGTGAGCCACTGCGCCTGGCCATGTAGATGACTTTTGACCAAAATGTTTCACCTTCTCATTCAGATATTCTTAGTA ACCAAAACAGTGACTCATGCAGTTGAGAGAGCCTTTGGGCTGTCAGTTTACAGTACATCAGGCTTGCTGAGGCTAAGCAAATCAGAAAGG TGCCATGTTTATAACAGAGGTCAAAGCTCCTTACTTCTGAAACATTAGCTGTGGTTAAAAACAAAAACTCTTCCTTCTTGTATTGCTTGT CTATCAAAGCCAGGAAAGTGGGGGATCACTGTAGTTAAATTTTTTTTTTTTTTAATTAGAGACAGAGTCTTGCCCTGTCGCCCAAGCTGG AGTGCACTGGCGCAATCGTGGTACACTGCAGCCTTGAACTCCTGGACTCAAGCAGTCCTCCTGCCTCAGCTTCCCAAGTAGTTGGGAGTA GGTGCACACCACCATGCCCAGCGAATTTTTTGTAGAGACAGAGGTCTTGCTATGTTGCCTAGGCTGGTATCAAAATTACTGGCCTCAAGC GATTCTCCTGCCTCGGCCTCCCAGATGTTGGGATTACTGGTGTGAGCCACCACGCCCAGCTCAAAAACAATTTTTTTAGGGGCACTTCTA CAAATCATGAAAGGGGGATAAAAGCACTGACTTTAAAAAGCCATGTTTAAGATGCTATAAATGTTCTCCCCTTTTCATTGATTGGAGAGT TGTAGAGGACCTTAGAGATCATTTTGTCTAACTCCCTCATCCCAAAGATAAACTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGA ACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGT AACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAG GGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGA TCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGG CTTAGTCCAGTGTTCTCTCTCCCTTACCACTCCTCTTCCCCTTCCCTCTATAATGGCAGTACCCAGGGCCCGGTCCATAGACTACTATCG AGTGCTCCTATGTGCATCTTAGTACGTATCATTTTCCCTTGCCTTTTTCCTTCTATCCTTTCAGTGGTAGCAACTGCCCTTGCTAATCAC CGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGCAGCTCAGTTCATCAAAGCCTAGCAGGTCCCCTCAGCTGCCTTTTCA TGCCTGCCACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAAAGCTTCCTATAGTAGTATCTCCCATGGC ACTTACCACATTCTATCTGGTATTACAGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATT >In-frame_ENST00000578199_ENST00000465271_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(amino acids)=138AA_start in transcript=541_stop in transcript=957 MKLRLPASPETHLDMLRHLYQGCQVVQGNLELTYLPTNASLSFLQWVIPELIGHTIVTVLLLMSLHWFIFLLNLPVATWNIYRYIMVPSG -------------------------------------------------------------- >In-frame_ENST00000578199_ENST00000366858_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(transcript)=1173nt_BP=676nt GTCCACACAGTTTAAATTAAAGTTCCCGGATTTTTGTGGGCGCCTGCCCCGCCCCTCGTCCCCCTGCTGTGTCCATATATCGAGGCGATA GGGTTAAGGGAAGGCGGACGCCTGATGGGTTAATGAGCAAACTGAAGTGTTTTCCATGATCTTTTTTGAGTCGCAATTGAAGTACCACCT CCCGAGGGTGATTGCTTCCCCATGCGGGGTAGAACCTTTGCTGTCCTGTTCACCACTCTACCTCCAGCACAGAATTTGGCTTATGCCTAC TCAATGTGAAGATGATGAGGATGAAAACCTTTGTGATGATCCACTTCCACTTAATGAATGGTGGCAAAGCAAAGCTATATTCAAGACCAC ATGCAAAGCTACTCCCTGAGCAAAGAGTCACAGATAAAACGGGGGCACCAGTAGAATGGCCAGGACAAACGCAGTGCAGCACAGAGACTC AGACCCTGGCAGCCATGCCTGCGCAGGCAGTGATGAGAGTGACATGTACTGTTGTGGACATGCACAAAAGTGAGTGTGCACCGGCACAGA CATGAAGCTGCGGCTCCCTGCCAGTCCCGAGACCCACCTGGACATGCTCCGCCACCTCTACCAGGGCTGCCAGGTGGTGCAGGGAAACCT GGAACTCACCTACCTGCCCACCAATGCCAGCCTGTCCTTCCTGCAGTGGGTAATTCCAGAATTGATTGGCCATACCATTGTCACTGTATT ACTGCTCATGTCATTGCACTGGTTCATCTTCCTTCTCAACTTACCTGTTGCCACTTGGAATATATATCGTGGTAGCAACTGCCCTTGCTA ATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGCAGCTCAGTTCATCAAAGCCTAGCAGGTCCCCTCAGCTGCCT TTTCATGCCTGCCACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAAAGCTTCCTATAGTAGTATCTCCC ATGGCACTTACCACATTCTATCTGGTATTACAGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAGAATATGC CCATTCATATTTGTATCTTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCTTGCACACAAACAATAAATGATTGTTGAGTGAATAAGT >In-frame_ENST00000578199_ENST00000366858_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(amino acids)=98AA_start in transcript=498_stop in transcript=794 MLWTCTKVSVHRHRHEAAAPCQSRDPPGHAPPPLPGLPGGAGKPGTHLPAHQCQPVLPAVGNSRIDWPYHCHCITAHVIALVHLPSQLTC -------------------------------------------------------------- >In-frame_ENST00000578199_ENST00000366857_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(transcript)=4447nt_BP=676nt GTCCACACAGTTTAAATTAAAGTTCCCGGATTTTTGTGGGCGCCTGCCCCGCCCCTCGTCCCCCTGCTGTGTCCATATATCGAGGCGATA GGGTTAAGGGAAGGCGGACGCCTGATGGGTTAATGAGCAAACTGAAGTGTTTTCCATGATCTTTTTTGAGTCGCAATTGAAGTACCACCT CCCGAGGGTGATTGCTTCCCCATGCGGGGTAGAACCTTTGCTGTCCTGTTCACCACTCTACCTCCAGCACAGAATTTGGCTTATGCCTAC TCAATGTGAAGATGATGAGGATGAAAACCTTTGTGATGATCCACTTCCACTTAATGAATGGTGGCAAAGCAAAGCTATATTCAAGACCAC ATGCAAAGCTACTCCCTGAGCAAAGAGTCACAGATAAAACGGGGGCACCAGTAGAATGGCCAGGACAAACGCAGTGCAGCACAGAGACTC AGACCCTGGCAGCCATGCCTGCGCAGGCAGTGATGAGAGTGACATGTACTGTTGTGGACATGCACAAAAGTGAGTGTGCACCGGCACAGA CATGAAGCTGCGGCTCCCTGCCAGTCCCGAGACCCACCTGGACATGCTCCGCCACCTCTACCAGGGCTGCCAGGTGGTGCAGGGAAACCT GGAACTCACCTACCTGCCCACCAATGCCAGCCTGTCCTTCCTGCAGTGGGTAATTCCAGAATTGATTGGCCATACCATTGTCACTGTATT ACTGCTCATGTCATTGCACTGGTTCATCTTCCTTCTCAACTTACCTGTTGCCACTTGGAATATATATCGTATGATCTTAGCTTTGATAAA TGACTGAAGCTGGAGAAGCCGTGGTTGAAGTCAGCCTACACTACAGTGCACAGTTGAGGAGCCAGAGACTTCTTAAATCATCCTTAGAAC CGTGACCATAGCAGTATATATTTTCCTCTTGGAACAAAAAACTATTTTTGCTGTATTTTTACCATATAAAGTATTTAAAAAACATGAATT GAGTTTCTGTAGATTTCTAGTTCTCAACTTTAGCCTGAACGCCAACACTTGAAGGTGTTTTTCATCCTCTGTATGTTGAAGGTGGTTATT TGTATGTAGGAACAGGACTGCCATCCCAGCTTTGCATGCCAAAGAAATAAAGAACACACTTTAAAGGGCAAACTGAAGAGATGAGCGAGC AAAGGTGCCCTTCAGGTCTACTGAAAAGTTAGAGTACAAAACAACACTGTTGATCTGGACAAAAGAAGAAAAATTACCCTTTTTGCTTGT GTTGTGACAACTTCATTTAATATGGTTTAAAGATTTATGAGACTGTCAGCTAAAAGTCTTTTCACAAGAATGTCAACAGAGAATGGCATC TCAAAATATATATATTTCTTTGCACAATTTGTGAAACCTTATAAGCCATTTTCCCCAGGTACAATGTAGTTCCTGCTGATAGAAAGGAAA TATTTTGTCAAGAGCTTTCATTTAAAAGCTACTACCTCCACAATCACCCCCAAACCCAGAAAATCCCCACTGGCTCTTGCCAGTCTGGTT TTCGTATTGCAGTTATTCCAATTGTATTTGATCTCCCTGATAACGTATTTTCATGGGTTTGGGTAGAAGATGCTAATCAGATTAGAAGCA GGAATAGTTATTTGCTGTCTGTGAAATTGAGCCTTTTGGTGCGCCACGTGGTGCCAGATCAACACTTCTATCCCTCTGCACTGACCACGT TGTGAACTGGGAGACCAAATGCAAGCCATTTCATGGACATAGCAATATACAACCAAACTCTGTTCCTTGGAGTTATATTGTAAACTCTTG CAGGTGGGAGAGCAGTTCACCTCCTTAGCTCTGTTTGCCAGCTCTTACAGGGTAAAATAAACCTGGCAATTTATCCTCAGTCCTAGTTTG TGGTTTAATGTTGCTATCTTAAGCACTGGCATTTGGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCATTATTCACTCTAGTT GAGATAGAATTGGGTGGCTAAACAGGGTGTGTGGTACCCAAAAGATTAAATGTTACATGTCCTTTTAGTCCTTGACCAGGTCTAGCCTTG GCAGAAGCAAGGGAGCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGG AACGGTGAAATGGTAGGCAAAGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAATTGCTCCTTGTGGTAATCTTATATTTCTGT CAGGCACAGGGCCAAGAAGCTGTGTAACAGACATTACTTTGCTTGCATCTCTTTTTCATACCTTTTCCCTCTGAGGCAGCTTTTGCTTAG AAAACAGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTCTTCATGTTCTGCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAG AACTTAAATCCTTGCAACTGAGAGATAAGCTACTTAAAGGCGGTAGAGATCTTTTTTTTTTTTTTTTTGAGATGGGGTCTTGCTGTGTTG CCCAGGCTGGAGTGCAGTGGTGTGATCTCAGCTCACTGCAACCTCTGCTTTCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTA GCTGGGATTACGGCTAGCTACTCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTC CTGACCTCAAACGATCTGCCTGCCTTGGTCTCCCAAAGTGCTGGGATTATAGGTGTGAGCCACTGCGCCTGGCCATGTAGATGACTTTTG ACCAAAATGTTTCACCTTCTCATTCAGATATTCTTAGTAACCAAAACAGTGACTCATGCAGTTGAGAGAGCCTTTGGGCTGTCAGTTTAC AGTACATCAGGCTTGCTGAGGCTAAGCAAATCAGAAAGGTGCCATGTTTATAACAGAGGTCAAAGCTCCTTACTTCTGAAACATTAGCTG TGGTTAAAAACAAAAACTCTTCCTTCTTGTATTGCTTGTCTATCAAAGCCAGGAAAGTGGGGGATCACTGTAGTTAAATTTTTTTTTTTT TTAATTAGAGACAGAGTCTTGCCCTGTCGCCCAAGCTGGAGTGCACTGGCGCAATCGTGGTACACTGCAGCCTTGAACTCCTGGACTCAA GCAGTCCTCCTGCCTCAGCTTCCCAAGTAGTTGGGAGTAGGTGCACACCACCATGCCCAGCGAATTTTTTGTAGAGACAGAGGTCTTGCT ATGTTGCCTAGGCTGGTATCAAAATTACTGGCCTCAAGCGATTCTCCTGCCTCGGCCTCCCAGATGTTGGGATTACTGGTGTGAGCCACC ACGCCCAGCTCAAAAACAATTTTTTTAGGGGCACTTCTACAAATCATGAAAGGGGGATAAAAGCACTGACTTTAAAAAGCCATGTTTAAG ATGCTATAAATGTTCTCCCCTTTTCATTGATTGGAGAGTTGTAGAGGACCTTAGAGATCATTTTGTCTAACTCCCTCATCCCAAAGATAA ACTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAAC ATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAA CTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGG TGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATC GTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCTTAGTCCAGTGTTCTCTCTCCCTTACCACTCCTCTTCCCCTTCCCTCTAT AATGGCAGTACCCAGGGCCCGGTCCATAGACTACTATCGAGTGCTCCTATGTGCATCTTAGTACGTATCATTTTCCCTTGCCTTTTTCCT TCTATCCTTTCAGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGCAGCTCAG TTCATCAAAGCCTAGCAGGTCCCCTCAGCTGCCTTTTCATGCCTGCCACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTA AGAGCTAAGAAAGCTTCCTATAGTAGTATCTCCCATGGCACTTACCACATTCTATCTGGTATTACAGTTATTTGTATGCAATTAATCACT CTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCTTGC >In-frame_ENST00000578199_ENST00000366857_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(amino acids)=104AA_start in transcript=498_stop in transcript=812 MLWTCTKVSVHRHRHEAAAPCQSRDPPGHAPPPLPGLPGGAGKPGTHLPAHQCQPVLPAVGNSRIDWPYHCHCITAHVIALVHLPSQLTC -------------------------------------------------------------- >In-frame_ENST00000540042_ENST00000465271_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(transcript)=4213nt_BP=301nt GAATGCACAGGGTGGGCCTAGTCAGAAGAAGCCTTTCCCCTGAAATCCCTCTACTTCCCAAGCACGCAAGCTTTCTCCTGCTGTTAAACC TGCAGTGTGCAAGGGACATGGGCGGAGGGGTCCTTCAGTCAGGCTTCTCCCTGTCTGAGTGTGCACCGGCACAGACATGAAGCTGCGGCT CCCTGCCAGTCCCGAGACCCACCTGGACATGCTCCGCCACCTCTACCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACTCACCTACCT GCCCACCAATGCCAGCCTGTCCTTCCTGCAGTGGGTAATTCCAGAATTGATTGGCCATACCATTGTCACTGTATTACTGCTCATGTCATT GCACTGGTTCATCTTCCTTCTCAACTTACCTGTTGCCACTTGGAATATATATCGATACATTATGGTGCCGAGTGGTAACATGGGAGTGTT TGATCCAACAGAAATACACAATCGAGGGCAGCTGAAGTCACACATGAAAGAAGCCATGATCAAGCTTGGTTTCCACTTGCTCTGCTTCTT CATGTATCTTTATAGTATGATCTTAGCTTTGATAAATGACTGAAGCTGGAGAAGCCGTGGTTGAAGTCAGCCTACACTACAGTGCACAGT TGAGGAGCCAGAGACTTCTTAAATCATCCTTAGAACCGTGACCATAGCAGTATATATTTTCCTCTTGGAACAAAAAACTATTTTTGCTGT ATTTTTACCATATAAAGTATTTAAAAAACATGAATTGAGTTTCTGTAGATTTCTAGTTCTCAACTTTAGCCTGAACGCCAACACTTGAAG GTGTTTTTCATCCTCTGTATGTTGAAGGTGGTTATTTGTATGTAGGAACAGGACTGCCATCCCAGCTTTGCATGCCAAAGAAATAAAGAA CACACTTTAAAGGGCAAACTGAAGAGATGAGCGAGCAAAGGTGCCCTTCAGGTCTACTGAAAAGTTAGAGTACAAAACAACACTGTTGAT CTGGACAAAAGAAGAAAAATTACCCTTTTTGCTTGTGTTGTGACAACTTCATTTAATATGGTTTAAAGATTTATGAGACTGTCAGCTAAA AGTCTTTTCACAAGAATGTCAACAGAGAATGGCATCTCAAAATATATATATTTCTTTGCACAATTTGTGAAACCTTATAAGCCATTTTCC CCAGGTACAATGTAGTTCCTGCTGATAGAAAGGAAATATTTTGTCAAGAGCTTTCATTTAAAAGCTACTACCTCCACAATCACCCCCAAA CCCAGAAAATCCCCACTGGCTCTTGCCAGTCTGGTTTTCGTATTGCAGTTATTCCAATTGTATTTGATCTCCCTGATAACGTATTTTCAT GGGTTTGGGTAGAAGATGCTAATCAGATTAGAAGCAGGAATAGTTATTTGCTGTCTGTGAAATTGAGCCTTTTGGTGCGCCACGTGGTGC CAGATCAACACTTCTATCCCTCTGCACTGACCACGTTGTGAACTGGGAGACCAAATGCAAGCCATTTCATGGACATAGCAATATACAACC AAACTCTGTTCCTTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTTAGCTCTGTTTGCCAGCTCTTACAGGGTA AAATAAACCTGGCAATTTATCCTCAGTCCTAGTTTGTGGTTTAATGTTGCTATCTTAAGCACTGGCATTTGGGCAAAACATGACTGTGTT CTGTGGGAGAATCCAAAGGCATTATTCACTCTAGTTGAGATAGAATTGGGTGGCTAAACAGGGTGTGTGGTACCCAAAAGATTAAATGTT ACATGTCCTTTTAGTCCTTGACCAGGTCTAGCCTTGGCAGAAGCAAGGGAGCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTC AAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGAAATGGTAGGCAAAGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCA CAGAAATTGCTCCTTGTGGTAATCTTATATTTCTGTCAGGCACAGGGCCAAGAAGCTGTGTAACAGACATTACTTTGCTTGCATCTCTTT TTCATACCTTTTCCCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTCTTCATGTT CTGCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCTTGCAACTGAGAGATAAGCTACTTAAAGGCGGTAGAGATCTTT TTTTTTTTTTTTTTGAGATGGGGTCTTGCTGTGTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTCAGCTCACTGCAACCTCTGCTTTCTG GGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACGGCTAGCTACTCCTGGCTAATTTTTGTATTTTTAGTAGAGATG GGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAACGATCTGCCTGCCTTGGTCTCCCAAAGTGCTGGGATTATAGGT GTGAGCCACTGCGCCTGGCCATGTAGATGACTTTTGACCAAAATGTTTCACCTTCTCATTCAGATATTCTTAGTAACCAAAACAGTGACT CATGCAGTTGAGAGAGCCTTTGGGCTGTCAGTTTACAGTACATCAGGCTTGCTGAGGCTAAGCAAATCAGAAAGGTGCCATGTTTATAAC AGAGGTCAAAGCTCCTTACTTCTGAAACATTAGCTGTGGTTAAAAACAAAAACTCTTCCTTCTTGTATTGCTTGTCTATCAAAGCCAGGA AAGTGGGGGATCACTGTAGTTAAATTTTTTTTTTTTTTAATTAGAGACAGAGTCTTGCCCTGTCGCCCAAGCTGGAGTGCACTGGCGCAA TCGTGGTACACTGCAGCCTTGAACTCCTGGACTCAAGCAGTCCTCCTGCCTCAGCTTCCCAAGTAGTTGGGAGTAGGTGCACACCACCAT GCCCAGCGAATTTTTTGTAGAGACAGAGGTCTTGCTATGTTGCCTAGGCTGGTATCAAAATTACTGGCCTCAAGCGATTCTCCTGCCTCG GCCTCCCAGATGTTGGGATTACTGGTGTGAGCCACCACGCCCAGCTCAAAAACAATTTTTTTAGGGGCACTTCTACAAATCATGAAAGGG GGATAAAAGCACTGACTTTAAAAAGCCATGTTTAAGATGCTATAAATGTTCTCCCCTTTTCATTGATTGGAGAGTTGTAGAGGACCTTAG AGATCATTTTGTCTAACTCCCTCATCCCAAAGATAAACTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGA GGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTG AATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGG AACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTG TAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCTTAGTCCAGTGTTC TCTCTCCCTTACCACTCCTCTTCCCCTTCCCTCTATAATGGCAGTACCCAGGGCCCGGTCCATAGACTACTATCGAGTGCTCCTATGTGC ATCTTAGTACGTATCATTTTCCCTTGCCTTTTTCCTTCTATCCTTTCAGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGA GAAAGAAGAGGAAGCGAAATCCAAGATGCAGCTCAGTTCATCAAAGCCTAGCAGGTCCCCTCAGCTGCCTTTTCATGCCTGCCACAGACT ACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAAAGCTTCCTATAGTAGTATCTCCCATGGCACTTACCACATTCTA TCTGGTATTACAGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTC >In-frame_ENST00000540042_ENST00000465271_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(amino acids)=138AA_start in transcript=166_stop in transcript=582 MKLRLPASPETHLDMLRHLYQGCQVVQGNLELTYLPTNASLSFLQWVIPELIGHTIVTVLLLMSLHWFIFLLNLPVATWNIYRYIMVPSG -------------------------------------------------------------- >In-frame_ENST00000540042_ENST00000366858_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(transcript)=798nt_BP=301nt GAATGCACAGGGTGGGCCTAGTCAGAAGAAGCCTTTCCCCTGAAATCCCTCTACTTCCCAAGCACGCAAGCTTTCTCCTGCTGTTAAACC TGCAGTGTGCAAGGGACATGGGCGGAGGGGTCCTTCAGTCAGGCTTCTCCCTGTCTGAGTGTGCACCGGCACAGACATGAAGCTGCGGCT CCCTGCCAGTCCCGAGACCCACCTGGACATGCTCCGCCACCTCTACCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACTCACCTACCT GCCCACCAATGCCAGCCTGTCCTTCCTGCAGTGGGTAATTCCAGAATTGATTGGCCATACCATTGTCACTGTATTACTGCTCATGTCATT GCACTGGTTCATCTTCCTTCTCAACTTACCTGTTGCCACTTGGAATATATATCGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCG GCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGCAGCTCAGTTCATCAAAGCCTAGCAGGTCCCCTCAGCTGCCTTTTCATGCCTGCCAC AGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAAAGCTTCCTATAGTAGTATCTCCCATGGCACTTACCACA TTCTATCTGGTATTACAGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAGAATATGCCCATTCATATTTGTA >In-frame_ENST00000540042_ENST00000366858_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(amino acids)=91AA_start in transcript=144_stop in transcript=419 MSVHRHRHEAAAPCQSRDPPGHAPPPLPGLPGGAGKPGTHLPAHQCQPVLPAVGNSRIDWPYHCHCITAHVIALVHLPSQLTCCHLEYIS -------------------------------------------------------------- >In-frame_ENST00000540042_ENST00000366857_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(transcript)=4072nt_BP=301nt GAATGCACAGGGTGGGCCTAGTCAGAAGAAGCCTTTCCCCTGAAATCCCTCTACTTCCCAAGCACGCAAGCTTTCTCCTGCTGTTAAACC TGCAGTGTGCAAGGGACATGGGCGGAGGGGTCCTTCAGTCAGGCTTCTCCCTGTCTGAGTGTGCACCGGCACAGACATGAAGCTGCGGCT CCCTGCCAGTCCCGAGACCCACCTGGACATGCTCCGCCACCTCTACCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACTCACCTACCT GCCCACCAATGCCAGCCTGTCCTTCCTGCAGTGGGTAATTCCAGAATTGATTGGCCATACCATTGTCACTGTATTACTGCTCATGTCATT GCACTGGTTCATCTTCCTTCTCAACTTACCTGTTGCCACTTGGAATATATATCGTATGATCTTAGCTTTGATAAATGACTGAAGCTGGAG AAGCCGTGGTTGAAGTCAGCCTACACTACAGTGCACAGTTGAGGAGCCAGAGACTTCTTAAATCATCCTTAGAACCGTGACCATAGCAGT ATATATTTTCCTCTTGGAACAAAAAACTATTTTTGCTGTATTTTTACCATATAAAGTATTTAAAAAACATGAATTGAGTTTCTGTAGATT TCTAGTTCTCAACTTTAGCCTGAACGCCAACACTTGAAGGTGTTTTTCATCCTCTGTATGTTGAAGGTGGTTATTTGTATGTAGGAACAG GACTGCCATCCCAGCTTTGCATGCCAAAGAAATAAAGAACACACTTTAAAGGGCAAACTGAAGAGATGAGCGAGCAAAGGTGCCCTTCAG GTCTACTGAAAAGTTAGAGTACAAAACAACACTGTTGATCTGGACAAAAGAAGAAAAATTACCCTTTTTGCTTGTGTTGTGACAACTTCA TTTAATATGGTTTAAAGATTTATGAGACTGTCAGCTAAAAGTCTTTTCACAAGAATGTCAACAGAGAATGGCATCTCAAAATATATATAT TTCTTTGCACAATTTGTGAAACCTTATAAGCCATTTTCCCCAGGTACAATGTAGTTCCTGCTGATAGAAAGGAAATATTTTGTCAAGAGC TTTCATTTAAAAGCTACTACCTCCACAATCACCCCCAAACCCAGAAAATCCCCACTGGCTCTTGCCAGTCTGGTTTTCGTATTGCAGTTA TTCCAATTGTATTTGATCTCCCTGATAACGTATTTTCATGGGTTTGGGTAGAAGATGCTAATCAGATTAGAAGCAGGAATAGTTATTTGC TGTCTGTGAAATTGAGCCTTTTGGTGCGCCACGTGGTGCCAGATCAACACTTCTATCCCTCTGCACTGACCACGTTGTGAACTGGGAGAC CAAATGCAAGCCATTTCATGGACATAGCAATATACAACCAAACTCTGTTCCTTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAG TTCACCTCCTTAGCTCTGTTTGCCAGCTCTTACAGGGTAAAATAAACCTGGCAATTTATCCTCAGTCCTAGTTTGTGGTTTAATGTTGCT ATCTTAAGCACTGGCATTTGGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCATTATTCACTCTAGTTGAGATAGAATTGGGT GGCTAAACAGGGTGTGTGGTACCCAAAAGATTAAATGTTACATGTCCTTTTAGTCCTTGACCAGGTCTAGCCTTGGCAGAAGCAAGGGAG CCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGAAATGGTA GGCAAAGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAATTGCTCCTTGTGGTAATCTTATATTTCTGTCAGGCACAGGGCCAA GAAGCTGTGTAACAGACATTACTTTGCTTGCATCTCTTTTTCATACCTTTTCCCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCA CTCTGCCTTTCCTCCTAACTTCCTGTGCCTCTTCATGTTCTGCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCTTGC AACTGAGAGATAAGCTACTTAAAGGCGGTAGAGATCTTTTTTTTTTTTTTTTTGAGATGGGGTCTTGCTGTGTTGCCCAGGCTGGAGTGC AGTGGTGTGATCTCAGCTCACTGCAACCTCTGCTTTCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACGGCT AGCTACTCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAACGAT CTGCCTGCCTTGGTCTCCCAAAGTGCTGGGATTATAGGTGTGAGCCACTGCGCCTGGCCATGTAGATGACTTTTGACCAAAATGTTTCAC CTTCTCATTCAGATATTCTTAGTAACCAAAACAGTGACTCATGCAGTTGAGAGAGCCTTTGGGCTGTCAGTTTACAGTACATCAGGCTTG CTGAGGCTAAGCAAATCAGAAAGGTGCCATGTTTATAACAGAGGTCAAAGCTCCTTACTTCTGAAACATTAGCTGTGGTTAAAAACAAAA ACTCTTCCTTCTTGTATTGCTTGTCTATCAAAGCCAGGAAAGTGGGGGATCACTGTAGTTAAATTTTTTTTTTTTTTAATTAGAGACAGA GTCTTGCCCTGTCGCCCAAGCTGGAGTGCACTGGCGCAATCGTGGTACACTGCAGCCTTGAACTCCTGGACTCAAGCAGTCCTCCTGCCT CAGCTTCCCAAGTAGTTGGGAGTAGGTGCACACCACCATGCCCAGCGAATTTTTTGTAGAGACAGAGGTCTTGCTATGTTGCCTAGGCTG GTATCAAAATTACTGGCCTCAAGCGATTCTCCTGCCTCGGCCTCCCAGATGTTGGGATTACTGGTGTGAGCCACCACGCCCAGCTCAAAA ACAATTTTTTTAGGGGCACTTCTACAAATCATGAAAGGGGGATAAAAGCACTGACTTTAAAAAGCCATGTTTAAGATGCTATAAATGTTC TCCCCTTTTCATTGATTGGAGAGTTGTAGAGGACCTTAGAGATCATTTTGTCTAACTCCCTCATCCCAAAGATAAACTGAGGCCTAGAGA TCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGG CCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAA TGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAA CATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTA ACTGGGAACATCTGAATGCTGAGGCTTAGTCCAGTGTTCTCTCTCCCTTACCACTCCTCTTCCCCTTCCCTCTATAATGGCAGTACCCAG GGCCCGGTCCATAGACTACTATCGAGTGCTCCTATGTGCATCTTAGTACGTATCATTTTCCCTTGCCTTTTTCCTTCTATCCTTTCAGTG GTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGCAGCTCAGTTCATCAAAGCCTAG CAGGTCCCCTCAGCTGCCTTTTCATGCCTGCCACAGACTACAGTAGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAAAGCT TCCTATAGTAGTATCTCCCATGGCACTTACCACATTCTATCTGGTATTACAGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGTT CCTGGAGGGCAGAATATGCCCATTCATATTTGTATCTTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCTTGCACACAAACAATAAAT >In-frame_ENST00000540042_ENST00000366857_TCGA-D1-A3JP-01A_ERBB2_chr17_37863394_+_CNIH4_chr1_224553581_length(amino acids)=97AA_start in transcript=144_stop in transcript=437 MSVHRHRHEAAAPCQSRDPPGHAPPPLPGLPGGAGKPGTHLPAHQCQPVLPAVGNSRIDWPYHCHCITAHVIALVHLPSQLTCCHLEYIS -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for ERBB2-CNIH4 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | ERBB2 | chr17:37863394 | chr1:224553581 | ENST00000269571 | + | 2 | 27 | 1195_1197 | 75.0 | 1256.0 | PIK3C2B |
Hgene | ERBB2 | chr17:37863394 | chr1:224553581 | ENST00000541774 | + | 2 | 27 | 1195_1197 | 60.0 | 1241.0 | PIK3C2B |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for ERBB2-CNIH4 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Hgene | ERBB2 | P04626 | DB06366 | Pertuzumab | Inhibitor | Biotech | Approved |
Hgene | ERBB2 | P04626 | DB06366 | Pertuzumab | Inhibitor | Biotech | Approved |
Hgene | ERBB2 | P04626 | DB06366 | Pertuzumab | Inhibitor | Biotech | Approved |
Hgene | ERBB2 | P04626 | DB06366 | Pertuzumab | Inhibitor | Biotech | Approved |
Hgene | ERBB2 | P04626 | DB06366 | Pertuzumab | Inhibitor | Biotech | Approved |
Hgene | ERBB2 | P04626 | DB08916 | Afatinib | Inhibitor | Small molecule | Approved |
Hgene | ERBB2 | P04626 | DB08916 | Afatinib | Inhibitor | Small molecule | Approved |
Hgene | ERBB2 | P04626 | DB08916 | Afatinib | Inhibitor | Small molecule | Approved |
Hgene | ERBB2 | P04626 | DB08916 | Afatinib | Inhibitor | Small molecule | Approved |
Hgene | ERBB2 | P04626 | DB08916 | Afatinib | Inhibitor | Small molecule | Approved |
Hgene | ERBB2 | P04626 | DB00072 | Trastuzumab | Antibody | Biotech | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB00072 | Trastuzumab | Antibody | Biotech | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB00072 | Trastuzumab | Antibody | Biotech | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB00072 | Trastuzumab | Antibody | Biotech | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB00072 | Trastuzumab | Antibody | Biotech | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB01259 | Lapatinib | Antagonist | Small molecule | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB01259 | Lapatinib | Antagonist | Small molecule | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB01259 | Lapatinib | Antagonist | Small molecule | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB01259 | Lapatinib | Antagonist | Small molecule | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB01259 | Lapatinib | Antagonist | Small molecule | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB05773 | Trastuzumab emtansine | Antibody | Biotech | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB05773 | Trastuzumab emtansine | Antibody | Biotech | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB05773 | Trastuzumab emtansine | Antibody | Biotech | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB05773 | Trastuzumab emtansine | Antibody | Biotech | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB05773 | Trastuzumab emtansine | Antibody | Biotech | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB11652 | Tucatinib | Inhibitor | Small molecule | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB11652 | Tucatinib | Inhibitor | Small molecule | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB11652 | Tucatinib | Inhibitor | Small molecule | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB11652 | Tucatinib | Inhibitor | Small molecule | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB11652 | Tucatinib | Inhibitor | Small molecule | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB12010 | Fostamatinib | Inhibitor | Small molecule | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB12010 | Fostamatinib | Inhibitor | Small molecule | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB12010 | Fostamatinib | Inhibitor | Small molecule | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB12010 | Fostamatinib | Inhibitor | Small molecule | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB12010 | Fostamatinib | Inhibitor | Small molecule | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB12267 | Brigatinib | Inhibitor | Small molecule | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB12267 | Brigatinib | Inhibitor | Small molecule | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB12267 | Brigatinib | Inhibitor | Small molecule | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB12267 | Brigatinib | Inhibitor | Small molecule | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB12267 | Brigatinib | Inhibitor | Small molecule | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB15035 | Zanubrutinib | Inhibitor | Small molecule | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB15035 | Zanubrutinib | Inhibitor | Small molecule | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB15035 | Zanubrutinib | Inhibitor | Small molecule | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB15035 | Zanubrutinib | Inhibitor | Small molecule | Approved|Investigational |
Hgene | ERBB2 | P04626 | DB15035 | Zanubrutinib | Inhibitor | Small molecule | Approved|Investigational |
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Related Diseases for ERBB2-CNIH4 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | ERBB2 | C0006142 | Malignant neoplasm of breast | 40 | CGI;CTD_human |
Hgene | ERBB2 | C0678222 | Breast Carcinoma | 40 | CGI;CTD_human |
Hgene | ERBB2 | C1257931 | Mammary Neoplasms, Human | 40 | CTD_human |
Hgene | ERBB2 | C1458155 | Mammary Neoplasms | 40 | CTD_human |
Hgene | ERBB2 | C4704874 | Mammary Carcinoma, Human | 40 | CTD_human |
Hgene | ERBB2 | C1140680 | Malignant neoplasm of ovary | 4 | CGI;CTD_human;UNIPROT |
Hgene | ERBB2 | C0024623 | Malignant neoplasm of stomach | 3 | CGI;CTD_human |
Hgene | ERBB2 | C0033578 | Prostatic Neoplasms | 3 | CTD_human |
Hgene | ERBB2 | C0038356 | Stomach Neoplasms | 3 | CGI;CTD_human |
Hgene | ERBB2 | C0235874 | Disease Exacerbation | 3 | CTD_human |
Hgene | ERBB2 | C0376358 | Malignant neoplasm of prostate | 3 | CTD_human |
Hgene | ERBB2 | C1708349 | Hereditary Diffuse Gastric Cancer | 3 | CTD_human |
Hgene | ERBB2 | C0001418 | Adenocarcinoma | 2 | CTD_human |
Hgene | ERBB2 | C0024668 | Mammary Neoplasms, Experimental | 2 | CTD_human |
Hgene | ERBB2 | C0205641 | Adenocarcinoma, Basal Cell | 2 | CTD_human |
Hgene | ERBB2 | C0205642 | Adenocarcinoma, Oxyphilic | 2 | CTD_human |
Hgene | ERBB2 | C0205643 | Carcinoma, Cribriform | 2 | CTD_human |
Hgene | ERBB2 | C0205644 | Carcinoma, Granular Cell | 2 | CTD_human |
Hgene | ERBB2 | C0205645 | Adenocarcinoma, Tubular | 2 | CTD_human |
Hgene | ERBB2 | C0699791 | Stomach Carcinoma | 2 | CGI;UNIPROT |
Hgene | ERBB2 | C0919267 | ovarian neoplasm | 2 | CGI;CTD_human |
Hgene | ERBB2 | C0007102 | Malignant tumor of colon | 1 | CTD_human |
Hgene | ERBB2 | C0007134 | Renal Cell Carcinoma | 1 | CTD_human |
Hgene | ERBB2 | C0009375 | Colonic Neoplasms | 1 | CTD_human |
Hgene | ERBB2 | C0013930 | Embolism, Tumor | 1 | CTD_human |
Hgene | ERBB2 | C0014859 | Esophageal Neoplasms | 1 | CTD_human |
Hgene | ERBB2 | C0016978 | gallbladder neoplasm | 1 | CTD_human |
Hgene | ERBB2 | C0017185 | Gastrointestinal Neoplasms | 1 | CTD_human |
Hgene | ERBB2 | C0021367 | Mammary Ductal Carcinoma | 1 | CTD_human |
Hgene | ERBB2 | C0024121 | Lung Neoplasms | 1 | CTD_human |
Hgene | ERBB2 | C0024232 | Lymphatic Metastasis | 1 | CTD_human |
Hgene | ERBB2 | C0024667 | Animal Mammary Neoplasms | 1 | CTD_human |
Hgene | ERBB2 | C0025149 | Medulloblastoma | 1 | CTD_human |
Hgene | ERBB2 | C0027627 | Neoplasm Metastasis | 1 | CTD_human |
Hgene | ERBB2 | C0027643 | Neoplasm Recurrence, Local | 1 | CTD_human |
Hgene | ERBB2 | C0027659 | Neoplasms, Experimental | 1 | CTD_human |
Hgene | ERBB2 | C0030354 | Papilloma | 1 | CTD_human |
Hgene | ERBB2 | C0153452 | Malignant neoplasm of gallbladder | 1 | CTD_human |
Hgene | ERBB2 | C0205833 | Medullomyoblastoma | 1 | CTD_human |
Hgene | ERBB2 | C0205874 | Papilloma, Squamous Cell | 1 | CTD_human |
Hgene | ERBB2 | C0205875 | Papillomatosis | 1 | CTD_human |
Hgene | ERBB2 | C0206698 | Cholangiocarcinoma | 1 | CTD_human |
Hgene | ERBB2 | C0242379 | Malignant neoplasm of lung | 1 | CTD_human |
Hgene | ERBB2 | C0278510 | Childhood Medulloblastoma | 1 | CTD_human |
Hgene | ERBB2 | C0278876 | Adult Medulloblastoma | 1 | CTD_human |
Hgene | ERBB2 | C0279702 | Conventional (Clear Cell) Renal Cell Carcinoma | 1 | CTD_human |
Hgene | ERBB2 | C0345905 | Intrahepatic Cholangiocarcinoma | 1 | CTD_human |
Hgene | ERBB2 | C0546837 | Malignant neoplasm of esophagus | 1 | CTD_human |
Hgene | ERBB2 | C0596263 | Carcinogenesis | 1 | CTD_human |
Hgene | ERBB2 | C0684249 | Carcinoma of lung | 1 | UNIPROT |
Hgene | ERBB2 | C0685938 | Malignant neoplasm of gastrointestinal tract | 1 | CTD_human |
Hgene | ERBB2 | C0751291 | Desmoplastic Medulloblastoma | 1 | CTD_human |
Hgene | ERBB2 | C1134719 | Invasive Ductal Breast Carcinoma | 1 | CTD_human |
Hgene | ERBB2 | C1257925 | Mammary Carcinoma, Animal | 1 | CTD_human |
Hgene | ERBB2 | C1266042 | Chromophobe Renal Cell Carcinoma | 1 | CTD_human |
Hgene | ERBB2 | C1266043 | Sarcomatoid Renal Cell Carcinoma | 1 | CTD_human |
Hgene | ERBB2 | C1266044 | Collecting Duct Carcinoma of the Kidney | 1 | CTD_human |
Hgene | ERBB2 | C1275668 | Melanotic medulloblastoma | 1 | CTD_human |
Hgene | ERBB2 | C1306837 | Papillary Renal Cell Carcinoma | 1 | CTD_human |
Hgene | ERBB2 | C1368275 | Pigmented Basal Cell Carcinoma | 1 | CTD_human |
Hgene | ERBB2 | C2750850 | GLIOMA SUSCEPTIBILITY 1 | 1 | UNIPROT |
Hgene | ERBB2 | C2931822 | Nasopharyngeal carcinoma | 1 | CTD_human |
Hgene | ERBB2 | C3805278 | Extrahepatic Cholangiocarcinoma | 1 | CTD_human |
Hgene | ERBB2 | C4721610 | Carcinoma, Ovarian Epithelial | 1 | CTD_human |
Hgene | ERBB2 | C4721806 | Carcinoma, Basal Cell | 1 | CTD_human |