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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:ETFA-METTL9 (FusionGDB2 ID:27590) |
Fusion Gene Summary for ETFA-METTL9 |
Fusion gene summary |
Fusion gene information | Fusion gene name: ETFA-METTL9 | Fusion gene ID: 27590 | Hgene | Tgene | Gene symbol | ETFA | METTL9 | Gene ID | 2108 | 51108 |
Gene name | electron transfer flavoprotein subunit alpha | methyltransferase like 9 | |
Synonyms | EMA|GA2|MADD | CGI-81|DREV|DREV1|PAP1 | |
Cytomap | 15q24.2-q24.3 | 16p12.2 | |
Type of gene | protein-coding | protein-coding | |
Description | electron transfer flavoprotein subunit alpha, mitochondrialalpha-ETFelectron transfer flavoprotein alpha subunitelectron transfer flavoprotein, alpha polypeptideepididymis secretory sperm binding proteinglutaric aciduria II | methyltransferase-like protein 9CTB-31N19.3DORA reverse strand protein 1p53 activated protein 1 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | Q9H1A3 | |
Ensembl transtripts involved in fusion gene | ENST00000557943, ENST00000433983, ENST00000560726, ENST00000559602, ENST00000560816, | ENST00000358154, ENST00000396014, ENST00000563026, | |
Fusion gene scores | * DoF score | 12 X 8 X 5=480 | 6 X 5 X 6=180 |
# samples | 12 | 6 | |
** MAII score | log2(12/480*10)=-2 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(6/180*10)=-1.58496250072116 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: ETFA [Title/Abstract] AND METTL9 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | ETFA(76603691)-METTL9(21623966), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | ETFA | GO:0033539 | fatty acid beta-oxidation using acyl-CoA dehydrogenase | 25416781 |
Fusion gene breakpoints across ETFA (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across METTL9 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | KIRP | TCGA-MH-A55Z-01A | ETFA | chr15 | 76603691 | - | METTL9 | chr16 | 21623966 | + |
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Fusion Gene ORF analysis for ETFA-METTL9 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000557943 | ENST00000358154 | ETFA | chr15 | 76603691 | - | METTL9 | chr16 | 21623966 | + |
In-frame | ENST00000557943 | ENST00000396014 | ETFA | chr15 | 76603691 | - | METTL9 | chr16 | 21623966 | + |
5CDS-intron | ENST00000557943 | ENST00000563026 | ETFA | chr15 | 76603691 | - | METTL9 | chr16 | 21623966 | + |
In-frame | ENST00000433983 | ENST00000358154 | ETFA | chr15 | 76603691 | - | METTL9 | chr16 | 21623966 | + |
In-frame | ENST00000433983 | ENST00000396014 | ETFA | chr15 | 76603691 | - | METTL9 | chr16 | 21623966 | + |
5CDS-intron | ENST00000433983 | ENST00000563026 | ETFA | chr15 | 76603691 | - | METTL9 | chr16 | 21623966 | + |
5UTR-3CDS | ENST00000560726 | ENST00000358154 | ETFA | chr15 | 76603691 | - | METTL9 | chr16 | 21623966 | + |
5UTR-3CDS | ENST00000560726 | ENST00000396014 | ETFA | chr15 | 76603691 | - | METTL9 | chr16 | 21623966 | + |
5UTR-intron | ENST00000560726 | ENST00000563026 | ETFA | chr15 | 76603691 | - | METTL9 | chr16 | 21623966 | + |
In-frame | ENST00000559602 | ENST00000358154 | ETFA | chr15 | 76603691 | - | METTL9 | chr16 | 21623966 | + |
In-frame | ENST00000559602 | ENST00000396014 | ETFA | chr15 | 76603691 | - | METTL9 | chr16 | 21623966 | + |
5CDS-intron | ENST00000559602 | ENST00000563026 | ETFA | chr15 | 76603691 | - | METTL9 | chr16 | 21623966 | + |
intron-3CDS | ENST00000560816 | ENST00000358154 | ETFA | chr15 | 76603691 | - | METTL9 | chr16 | 21623966 | + |
intron-3CDS | ENST00000560816 | ENST00000396014 | ETFA | chr15 | 76603691 | - | METTL9 | chr16 | 21623966 | + |
intron-intron | ENST00000560816 | ENST00000563026 | ETFA | chr15 | 76603691 | - | METTL9 | chr16 | 21623966 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000557943 | ETFA | chr15 | 76603691 | - | ENST00000358154 | METTL9 | chr16 | 21623966 | + | 2953 | 120 | 9 | 911 | 300 |
ENST00000557943 | ETFA | chr15 | 76603691 | - | ENST00000396014 | METTL9 | chr16 | 21623966 | + | 1596 | 120 | 9 | 908 | 299 |
ENST00000433983 | ETFA | chr15 | 76603691 | - | ENST00000358154 | METTL9 | chr16 | 21623966 | + | 2888 | 55 | 16 | 846 | 276 |
ENST00000433983 | ETFA | chr15 | 76603691 | - | ENST00000396014 | METTL9 | chr16 | 21623966 | + | 1531 | 55 | 16 | 843 | 275 |
ENST00000559602 | ETFA | chr15 | 76603691 | - | ENST00000358154 | METTL9 | chr16 | 21623966 | + | 2898 | 65 | 26 | 856 | 276 |
ENST00000559602 | ETFA | chr15 | 76603691 | - | ENST00000396014 | METTL9 | chr16 | 21623966 | + | 1541 | 65 | 26 | 853 | 275 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000557943 | ENST00000358154 | ETFA | chr15 | 76603691 | - | METTL9 | chr16 | 21623966 | + | 0.000264999 | 0.99973494 |
ENST00000557943 | ENST00000396014 | ETFA | chr15 | 76603691 | - | METTL9 | chr16 | 21623966 | + | 0.000328526 | 0.99967146 |
ENST00000433983 | ENST00000358154 | ETFA | chr15 | 76603691 | - | METTL9 | chr16 | 21623966 | + | 0.000265365 | 0.9997346 |
ENST00000433983 | ENST00000396014 | ETFA | chr15 | 76603691 | - | METTL9 | chr16 | 21623966 | + | 0.000328042 | 0.99967194 |
ENST00000559602 | ENST00000358154 | ETFA | chr15 | 76603691 | - | METTL9 | chr16 | 21623966 | + | 0.000267585 | 0.99973243 |
ENST00000559602 | ENST00000396014 | ETFA | chr15 | 76603691 | - | METTL9 | chr16 | 21623966 | + | 0.000314288 | 0.99968576 |
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Fusion Genomic Features for ETFA-METTL9 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
ETFA | chr15 | 76603690 | - | METTL9 | chr16 | 21623965 | + | 2.41E-05 | 0.9999759 |
ETFA | chr15 | 76603690 | - | METTL9 | chr16 | 21623965 | + | 2.41E-05 | 0.9999759 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for ETFA-METTL9 |
Go to FGviewer for the breakpoints of chr15:76603691-chr16:21623966 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | METTL9 |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ETFA | chr15:76603691 | chr16:21623966 | ENST00000433983 | - | 1 | 11 | 263_266 | 13.0 | 285.0 | Nucleotide binding | FAD |
Hgene | ETFA | chr15:76603691 | chr16:21623966 | ENST00000433983 | - | 1 | 11 | 281_286 | 13.0 | 285.0 | Nucleotide binding | FAD |
Hgene | ETFA | chr15:76603691 | chr16:21623966 | ENST00000433983 | - | 1 | 11 | 318_319 | 13.0 | 285.0 | Nucleotide binding | FAD |
Hgene | ETFA | chr15:76603691 | chr16:21623966 | ENST00000557943 | - | 1 | 12 | 263_266 | 13.0 | 334.0 | Nucleotide binding | FAD |
Hgene | ETFA | chr15:76603691 | chr16:21623966 | ENST00000557943 | - | 1 | 12 | 281_286 | 13.0 | 334.0 | Nucleotide binding | FAD |
Hgene | ETFA | chr15:76603691 | chr16:21623966 | ENST00000557943 | - | 1 | 12 | 318_319 | 13.0 | 334.0 | Nucleotide binding | FAD |
Hgene | ETFA | chr15:76603691 | chr16:21623966 | ENST00000433983 | - | 1 | 11 | 205_333 | 13.0 | 285.0 | Region | Domain II |
Hgene | ETFA | chr15:76603691 | chr16:21623966 | ENST00000433983 | - | 1 | 11 | 20_204 | 13.0 | 285.0 | Region | Domain I |
Hgene | ETFA | chr15:76603691 | chr16:21623966 | ENST00000557943 | - | 1 | 12 | 205_333 | 13.0 | 334.0 | Region | Domain II |
Hgene | ETFA | chr15:76603691 | chr16:21623966 | ENST00000557943 | - | 1 | 12 | 20_204 | 13.0 | 334.0 | Region | Domain I |
Tgene | METTL9 | chr15:76603691 | chr16:21623966 | ENST00000358154 | 0 | 5 | 44_47 | 55.0 | 319.0 | Compositional bias | Note=Poly-Ala | |
Tgene | METTL9 | chr15:76603691 | chr16:21623966 | ENST00000396014 | 0 | 5 | 44_47 | 55.0 | 318.0 | Compositional bias | Note=Poly-Ala |
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Fusion Gene Sequence for ETFA-METTL9 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000557943_ENST00000358154_TCGA-MH-A55Z-01A_ETFA_chr15_76603691_-_METTL9_chr16_21623966_length(transcript)=2953nt_BP=120nt ATTAGGTGACTGGCTGAGGCGGCGCCAGTTGGCCGGGCACGGGGCTGCTGTAAGGCCGAGGTTGCGGCGGAAGCGGAGACCATGTTCCGA GCGGCGGCTCCGGGGCAGCTCCGGCGGGCGTGGTATGTGTGCAACAGAGAGAAATTATGCGAATCACTCCAGGCTGTCTTTGTTCAGAGT TACCTTGATCAAGGAACACAGATCTTCTTAAACAACAGCATTGAGAAATCGGGCTGGCTATTTATCCAATTATATCATTCTTTTGTGTCA TCTGTTTTTAGCCTGTTTATGTCTAGAACATCTATCAATGGGTTGCTAGGAAGAGGCTCAATGTTTGTGTTTTCACCAGATCAGTTTCAG AGACTGCTTAAAATTAATCCAGACTGGAAAACCCACAGACTTCTTGATTTAGGTGCTGGAGATGGAGAAGTCACAAAAATCATGAGCCCT CATTTTGAAGAAATCTATGCCACTGAGCTTTCTGAAACTATGATATGGCAGCTTCAGAAAAAGAAATACAGAGTCCTTGGTATAAATGAA TGGCAGAATACGGGGTTCCAGTATGATGTCATCAGCTGCCTGAACTTGCTGGACCGCTGTGATCAGCCCCTGACTTTGTTAAAAGATATC AGAAGTGTCTTGGAGCCAACTAGAGGCAGGGTCATCCTTGCCCTTGTCCTCCCCTTTCATCCCTATGTGGAAAACGTAGGTGGCAAGTGG GAGAAACCATCAGAAATTTTGGAAATCAAAGGACAGAACTGGGAAGAACAAGTGAATAGTCTGCCTGAAGTTTTCAGAAAAGCTGGTTTT GTTATCGAAGCTTTCACCAGACTACCATACCTGTGTGAAGGCGACATGTATAATGACTACTACGTTCTGGATGACGCTGTCTTTGTTCTC AAACCAGTATAAACACGTGGAGGTCGAAGTCTTCAGAGTCCGCACCCTCCGGGATGTGCCCTTGGAAGAGGGTCTGTGTTCACAATTACG TGAAGGGAGGACCCTTGGGGACCGCCATTCTAAATATCATGTAGGAATTTAAAAAGCCAAAATACTAATTATTTCTTTGTAGTGTGTAAA GGAATGTTTTTAAAAGACAAAAACCCAACTCTTTGTGGATTTTTATCAACTCTTTACTCAGAGCCACTCTCCAATGCAGGTCACACTCCA ATTATGATGGAAGATATTTTTTATACTTAATTGCAGTAGGGACTCATTCCCAGACAAAGCAATAGTCACGACTTCATGGAACCAATCAAT GGATTGTTTTTTGAAGACTGGCAATAAAGCTGTCCATTCAATTCCAAATACTGGTTTTAAGGTATAGCCACTGATATTCTTTCATGTTTA GAAATTCTTTCTGTTATTATTCAAGAAAATGTTTTTAATCATGCTAATAAACTTTTTTGGAGATGACTTTGGCATCATGTTTGAATTCAT ATAAAGCTCCCCTAGCATTTTTTATTGGTTTGGCTTCAGGAGTACCCAAATAGTAGCATTATGAGAATGACGCAGACAATTTGAATAGGG GGGAAGGAAGGCTTCAGACTTGGGGGAAGGGGAGATTATTGCAAATTGCAGTGAACACTGAGTCAGTAAAAAAAAAAAACAGAAACAAAA ACCCAGCCTCATTCAGATACAGAACTTCAGGGACCCCTCCCCCCACCCCCCCAGTTAATGCTGCTGTGAAAAATGCAAAATAACCTGGTT CTGACTTTGTGATCACTCATGTCCCATACACTGAACTTTGTTTTTTTCTGGACAATCTCAGGTTCTCAGAATTGAAACATTCAGTTTTGT CTACTGACAAAATGCAACTAAAAATGTTTTAATTCAACTTCTTACTCTACACTTATATACCTCTCTCCCAGAGCTTGGCTCTTCCCTGAA ATCCTTAAAGGAGTTTATTATTTGCCAAGAATATGGTTTGATGAAGACCGTGTCAGACTCATGCATTCTGGAATCCGTGAGTGCCTCCAA CCATAAACCCAGAAATGCTGCCATAGAGGAACCCATTAGCAAGATCAATAACCATCGTGGATATTCCAAAGAGCAGAGCATTTAACCCAG AATCTGAAATCTCAGTAATAACAGAAATGTCAATATGAGATTGTGGTTATTAACAATATGTTATCCTCACTACTTTATTTCTTTTTTCAT CCAGGTGTTTCATTAAGTATTCTCATTTATATGCTCATAGAAGTCATCAGATCAACACATTCACTCCAACACCTGGGTATAAAGGCGAAT TAAAACCTGAAGAATTACTTTATTATTCATTAAGAACTGCATTCCCACATCCTCACACCAATATCTTCCACTGTTACTGTGCAGTCATAA TAAGAGTTGGGTTATGTGATTTATGCAAAATTGTTATTGGTGTGTTCTAATGATTTTTTTCCAGGAATTCAAGTAAGTGAAGTACAAATA CTTAGCACCATAGATTGTAAAAATAGAAAGAGGAAATGAGAAAACTTAATGTCGTTCTTGTACAGTTGAGTTTTGCTTCTTTATAAACTG TCTGTTAAAATCAGGGGTTGCTGTTAGACTGTCAAGCAGAAGTGATGGATGTTCAAGGAGGCAGGTTGCCCCAAAGTGTTTTCTAACTTT CAAGTAGAGAACTTTATGCTCTAATAAGAAAAATACAACTCATTCTTAACCACCCCCCCAAAACAGAGAAAACACATACATTTATGCATT TTAAAGATAAAAAGTAGTTTCTCAAAAAAATCTGAAGTTCTCTGAAAACCAGCTTATTAAAAGTGCTGTTTTGTGGTGAAAATTGAAACC AAATCCACTCACATTTCCTATCGGGTCTTGAAATTCTTGGTGGTGTGTCACCATTCCACTAGATGGCAGTGTTGCTTACTGAGTGTCAAT >In-frame_ENST00000557943_ENST00000358154_TCGA-MH-A55Z-01A_ETFA_chr15_76603691_-_METTL9_chr16_21623966_length(amino acids)=300AA_start in transcript=9_stop in transcript=911 MAEAAPVGRARGCCKAEVAAEAETMFRAAAPGQLRRAWYVCNREKLCESLQAVFVQSYLDQGTQIFLNNSIEKSGWLFIQLYHSFVSSVF SLFMSRTSINGLLGRGSMFVFSPDQFQRLLKINPDWKTHRLLDLGAGDGEVTKIMSPHFEEIYATELSETMIWQLQKKKYRVLGINEWQN TGFQYDVISCLNLLDRCDQPLTLLKDIRSVLEPTRGRVILALVLPFHPYVENVGGKWEKPSEILEIKGQNWEEQVNSLPEVFRKAGFVIE -------------------------------------------------------------- >In-frame_ENST00000557943_ENST00000396014_TCGA-MH-A55Z-01A_ETFA_chr15_76603691_-_METTL9_chr16_21623966_length(transcript)=1596nt_BP=120nt ATTAGGTGACTGGCTGAGGCGGCGCCAGTTGGCCGGGCACGGGGCTGCTGTAAGGCCGAGGTTGCGGCGGAAGCGGAGACCATGTTCCGA GCGGCGGCTCCGGGGCAGCTCCGGCGGGCGTGGTATGTGTGCAACAGAGAGAAATTATGCGAATCACTCCAGGCTGTCTTTGTTCAGAGT TACCTTGATCAAGGAACACAGATCTTCTTAAACAACAGCATTGAGAAATCGGGCTGGCTATTTATCCAATTATATCATTCTTTTGTGTCA TCTGTTTTTAGCCTGTTTATGTCTAGAACATCTATCAATGGGTTGCTAGGAAGAGGCTCAATGTTTGTGTTTTCACCAGATCAGTTTCAG AGACTGCTTAAAATTAATCCAGACTGGAAAACCCACAGACTTCTTGATTTAGGTGCTGGAGATGGAGAAGTCACAAAAATCATGAGCCCT CATTTTGAAGAAATCTATGCCACTGAGCTTTCTGAAACTATGATATGGCAGCTTCAGAAAAAGAAATACAGAGTCCTTGGTATAAATGAA TGGCAGAATACGGGGTTCCAGTATGATGTCATCAGCTGCCTGAACTTGCTGGACCGCTGTGATCAGCCCCTGACTTTGTTAAAAGATATC AGAAGTGTCTTGGAGCCAACTAGAGGCAGGGTCATCCTTGCCCTTGTCCTCCCCTTTCATCCCTATGTGGAAAACGGTGGCAAGTGGGAG AAACCATCAGAAATTTTGGAAATCAAAGGACAGAACTGGGAAGAACAAGTGAATAGTCTGCCTGAAGTTTTCAGAAAAGCTGGTTTTGTT ATCGAAGCTTTCACCAGACTACCATACCTGTGTGAAGGCGACATGTATAATGACTACTACGTTCTGGATGACGCTGTCTTTGTTCTCAAA CCAGTATAAACACGTGGAGGTCGAAGTCTTCAGAGTCCGCACCCTCCGGGATGTGCCCTTGGAAGAGGGTCTGTGTTCACAATTACGTGA AGGGAGGACCCTTGGGGACCGCCATTCTAAATATCATGTAGGAATTTAAAAAGCCAAAATACTAATTATTTCTTTGTAGTGTGTAAAGGA ATGTTTTTAAAAGACAAAAACCCAACTCTTTGTGGATTTTTATCAACTCTTTACTCAGAGCCACTCTCCAATGCAGGTCACACTCCAATT ATGATGGAAGATATTTTTTATACTTAATTGCAGTAGGGACTCATTCCCAGACAAAGCAATAGTCACGACTTCATGGAACCAATCAATGGA TTGTTTTTTGAAGACTGGCAATAAAGCTGTCCATTCAATTCCAAATACTGGTTTTAAGGTATAGCCACTGATATTCTTTCATGTTTAGAA ATTCTTTCTGTTATTATTCAAGAAAATGTTTTTAATCATGCTAATAAACTTTTTTGGAGATGACTTTGGCATCATGTTTGAATTCATATA AAGCTCCCCTAGCATTTTTTATTGGTTTGGCTTCAGGAGTACCCAAATAGTAGCATTATGAGAATGACGCAGACAATTTGAATAGGGGGG >In-frame_ENST00000557943_ENST00000396014_TCGA-MH-A55Z-01A_ETFA_chr15_76603691_-_METTL9_chr16_21623966_length(amino acids)=299AA_start in transcript=9_stop in transcript=908 MAEAAPVGRARGCCKAEVAAEAETMFRAAAPGQLRRAWYVCNREKLCESLQAVFVQSYLDQGTQIFLNNSIEKSGWLFIQLYHSFVSSVF SLFMSRTSINGLLGRGSMFVFSPDQFQRLLKINPDWKTHRLLDLGAGDGEVTKIMSPHFEEIYATELSETMIWQLQKKKYRVLGINEWQN TGFQYDVISCLNLLDRCDQPLTLLKDIRSVLEPTRGRVILALVLPFHPYVENGGKWEKPSEILEIKGQNWEEQVNSLPEVFRKAGFVIEA -------------------------------------------------------------- >In-frame_ENST00000433983_ENST00000358154_TCGA-MH-A55Z-01A_ETFA_chr15_76603691_-_METTL9_chr16_21623966_length(transcript)=2888nt_BP=55nt GGCGGAAGCGGAGACCATGTTCCGAGCGGCGGCTCCGGGGCAGCTCCGGCGGGCGTGGTATGTGTGCAACAGAGAGAAATTATGCGAATC ACTCCAGGCTGTCTTTGTTCAGAGTTACCTTGATCAAGGAACACAGATCTTCTTAAACAACAGCATTGAGAAATCGGGCTGGCTATTTAT CCAATTATATCATTCTTTTGTGTCATCTGTTTTTAGCCTGTTTATGTCTAGAACATCTATCAATGGGTTGCTAGGAAGAGGCTCAATGTT TGTGTTTTCACCAGATCAGTTTCAGAGACTGCTTAAAATTAATCCAGACTGGAAAACCCACAGACTTCTTGATTTAGGTGCTGGAGATGG AGAAGTCACAAAAATCATGAGCCCTCATTTTGAAGAAATCTATGCCACTGAGCTTTCTGAAACTATGATATGGCAGCTTCAGAAAAAGAA ATACAGAGTCCTTGGTATAAATGAATGGCAGAATACGGGGTTCCAGTATGATGTCATCAGCTGCCTGAACTTGCTGGACCGCTGTGATCA GCCCCTGACTTTGTTAAAAGATATCAGAAGTGTCTTGGAGCCAACTAGAGGCAGGGTCATCCTTGCCCTTGTCCTCCCCTTTCATCCCTA TGTGGAAAACGTAGGTGGCAAGTGGGAGAAACCATCAGAAATTTTGGAAATCAAAGGACAGAACTGGGAAGAACAAGTGAATAGTCTGCC TGAAGTTTTCAGAAAAGCTGGTTTTGTTATCGAAGCTTTCACCAGACTACCATACCTGTGTGAAGGCGACATGTATAATGACTACTACGT TCTGGATGACGCTGTCTTTGTTCTCAAACCAGTATAAACACGTGGAGGTCGAAGTCTTCAGAGTCCGCACCCTCCGGGATGTGCCCTTGG AAGAGGGTCTGTGTTCACAATTACGTGAAGGGAGGACCCTTGGGGACCGCCATTCTAAATATCATGTAGGAATTTAAAAAGCCAAAATAC TAATTATTTCTTTGTAGTGTGTAAAGGAATGTTTTTAAAAGACAAAAACCCAACTCTTTGTGGATTTTTATCAACTCTTTACTCAGAGCC ACTCTCCAATGCAGGTCACACTCCAATTATGATGGAAGATATTTTTTATACTTAATTGCAGTAGGGACTCATTCCCAGACAAAGCAATAG TCACGACTTCATGGAACCAATCAATGGATTGTTTTTTGAAGACTGGCAATAAAGCTGTCCATTCAATTCCAAATACTGGTTTTAAGGTAT AGCCACTGATATTCTTTCATGTTTAGAAATTCTTTCTGTTATTATTCAAGAAAATGTTTTTAATCATGCTAATAAACTTTTTTGGAGATG ACTTTGGCATCATGTTTGAATTCATATAAAGCTCCCCTAGCATTTTTTATTGGTTTGGCTTCAGGAGTACCCAAATAGTAGCATTATGAG AATGACGCAGACAATTTGAATAGGGGGGAAGGAAGGCTTCAGACTTGGGGGAAGGGGAGATTATTGCAAATTGCAGTGAACACTGAGTCA GTAAAAAAAAAAAACAGAAACAAAAACCCAGCCTCATTCAGATACAGAACTTCAGGGACCCCTCCCCCCACCCCCCCAGTTAATGCTGCT GTGAAAAATGCAAAATAACCTGGTTCTGACTTTGTGATCACTCATGTCCCATACACTGAACTTTGTTTTTTTCTGGACAATCTCAGGTTC TCAGAATTGAAACATTCAGTTTTGTCTACTGACAAAATGCAACTAAAAATGTTTTAATTCAACTTCTTACTCTACACTTATATACCTCTC TCCCAGAGCTTGGCTCTTCCCTGAAATCCTTAAAGGAGTTTATTATTTGCCAAGAATATGGTTTGATGAAGACCGTGTCAGACTCATGCA TTCTGGAATCCGTGAGTGCCTCCAACCATAAACCCAGAAATGCTGCCATAGAGGAACCCATTAGCAAGATCAATAACCATCGTGGATATT CCAAAGAGCAGAGCATTTAACCCAGAATCTGAAATCTCAGTAATAACAGAAATGTCAATATGAGATTGTGGTTATTAACAATATGTTATC CTCACTACTTTATTTCTTTTTTCATCCAGGTGTTTCATTAAGTATTCTCATTTATATGCTCATAGAAGTCATCAGATCAACACATTCACT CCAACACCTGGGTATAAAGGCGAATTAAAACCTGAAGAATTACTTTATTATTCATTAAGAACTGCATTCCCACATCCTCACACCAATATC TTCCACTGTTACTGTGCAGTCATAATAAGAGTTGGGTTATGTGATTTATGCAAAATTGTTATTGGTGTGTTCTAATGATTTTTTTCCAGG AATTCAAGTAAGTGAAGTACAAATACTTAGCACCATAGATTGTAAAAATAGAAAGAGGAAATGAGAAAACTTAATGTCGTTCTTGTACAG TTGAGTTTTGCTTCTTTATAAACTGTCTGTTAAAATCAGGGGTTGCTGTTAGACTGTCAAGCAGAAGTGATGGATGTTCAAGGAGGCAGG TTGCCCCAAAGTGTTTTCTAACTTTCAAGTAGAGAACTTTATGCTCTAATAAGAAAAATACAACTCATTCTTAACCACCCCCCCAAAACA GAGAAAACACATACATTTATGCATTTTAAAGATAAAAAGTAGTTTCTCAAAAAAATCTGAAGTTCTCTGAAAACCAGCTTATTAAAAGTG CTGTTTTGTGGTGAAAATTGAAACCAAATCCACTCACATTTCCTATCGGGTCTTGAAATTCTTGGTGGTGTGTCACCATTCCACTAGATG GCAGTGTTGCTTACTGAGTGTCAATGGCTTTTTTCCCCGTAAATGGAATCATGTTTTTCTCCCCCAAAGTACAATAAAGCTGCCTTGTCT >In-frame_ENST00000433983_ENST00000358154_TCGA-MH-A55Z-01A_ETFA_chr15_76603691_-_METTL9_chr16_21623966_length(amino acids)=276AA_start in transcript=16_stop in transcript=846 MFRAAAPGQLRRAWYVCNREKLCESLQAVFVQSYLDQGTQIFLNNSIEKSGWLFIQLYHSFVSSVFSLFMSRTSINGLLGRGSMFVFSPD QFQRLLKINPDWKTHRLLDLGAGDGEVTKIMSPHFEEIYATELSETMIWQLQKKKYRVLGINEWQNTGFQYDVISCLNLLDRCDQPLTLL KDIRSVLEPTRGRVILALVLPFHPYVENVGGKWEKPSEILEIKGQNWEEQVNSLPEVFRKAGFVIEAFTRLPYLCEGDMYNDYYVLDDAV -------------------------------------------------------------- >In-frame_ENST00000433983_ENST00000396014_TCGA-MH-A55Z-01A_ETFA_chr15_76603691_-_METTL9_chr16_21623966_length(transcript)=1531nt_BP=55nt GGCGGAAGCGGAGACCATGTTCCGAGCGGCGGCTCCGGGGCAGCTCCGGCGGGCGTGGTATGTGTGCAACAGAGAGAAATTATGCGAATC ACTCCAGGCTGTCTTTGTTCAGAGTTACCTTGATCAAGGAACACAGATCTTCTTAAACAACAGCATTGAGAAATCGGGCTGGCTATTTAT CCAATTATATCATTCTTTTGTGTCATCTGTTTTTAGCCTGTTTATGTCTAGAACATCTATCAATGGGTTGCTAGGAAGAGGCTCAATGTT TGTGTTTTCACCAGATCAGTTTCAGAGACTGCTTAAAATTAATCCAGACTGGAAAACCCACAGACTTCTTGATTTAGGTGCTGGAGATGG AGAAGTCACAAAAATCATGAGCCCTCATTTTGAAGAAATCTATGCCACTGAGCTTTCTGAAACTATGATATGGCAGCTTCAGAAAAAGAA ATACAGAGTCCTTGGTATAAATGAATGGCAGAATACGGGGTTCCAGTATGATGTCATCAGCTGCCTGAACTTGCTGGACCGCTGTGATCA GCCCCTGACTTTGTTAAAAGATATCAGAAGTGTCTTGGAGCCAACTAGAGGCAGGGTCATCCTTGCCCTTGTCCTCCCCTTTCATCCCTA TGTGGAAAACGGTGGCAAGTGGGAGAAACCATCAGAAATTTTGGAAATCAAAGGACAGAACTGGGAAGAACAAGTGAATAGTCTGCCTGA AGTTTTCAGAAAAGCTGGTTTTGTTATCGAAGCTTTCACCAGACTACCATACCTGTGTGAAGGCGACATGTATAATGACTACTACGTTCT GGATGACGCTGTCTTTGTTCTCAAACCAGTATAAACACGTGGAGGTCGAAGTCTTCAGAGTCCGCACCCTCCGGGATGTGCCCTTGGAAG AGGGTCTGTGTTCACAATTACGTGAAGGGAGGACCCTTGGGGACCGCCATTCTAAATATCATGTAGGAATTTAAAAAGCCAAAATACTAA TTATTTCTTTGTAGTGTGTAAAGGAATGTTTTTAAAAGACAAAAACCCAACTCTTTGTGGATTTTTATCAACTCTTTACTCAGAGCCACT CTCCAATGCAGGTCACACTCCAATTATGATGGAAGATATTTTTTATACTTAATTGCAGTAGGGACTCATTCCCAGACAAAGCAATAGTCA CGACTTCATGGAACCAATCAATGGATTGTTTTTTGAAGACTGGCAATAAAGCTGTCCATTCAATTCCAAATACTGGTTTTAAGGTATAGC CACTGATATTCTTTCATGTTTAGAAATTCTTTCTGTTATTATTCAAGAAAATGTTTTTAATCATGCTAATAAACTTTTTTGGAGATGACT TTGGCATCATGTTTGAATTCATATAAAGCTCCCCTAGCATTTTTTATTGGTTTGGCTTCAGGAGTACCCAAATAGTAGCATTATGAGAAT GACGCAGACAATTTGAATAGGGGGGAAGGAAGGCTTCAGACTTGGGGGAAGGGGAGATTATTGCAAATTGCAGTGAACACTGAGTCAGTA >In-frame_ENST00000433983_ENST00000396014_TCGA-MH-A55Z-01A_ETFA_chr15_76603691_-_METTL9_chr16_21623966_length(amino acids)=275AA_start in transcript=16_stop in transcript=843 MFRAAAPGQLRRAWYVCNREKLCESLQAVFVQSYLDQGTQIFLNNSIEKSGWLFIQLYHSFVSSVFSLFMSRTSINGLLGRGSMFVFSPD QFQRLLKINPDWKTHRLLDLGAGDGEVTKIMSPHFEEIYATELSETMIWQLQKKKYRVLGINEWQNTGFQYDVISCLNLLDRCDQPLTLL KDIRSVLEPTRGRVILALVLPFHPYVENGGKWEKPSEILEIKGQNWEEQVNSLPEVFRKAGFVIEAFTRLPYLCEGDMYNDYYVLDDAVF -------------------------------------------------------------- >In-frame_ENST00000559602_ENST00000358154_TCGA-MH-A55Z-01A_ETFA_chr15_76603691_-_METTL9_chr16_21623966_length(transcript)=2898nt_BP=65nt CCGAGGTTGCGGCGGAAGCGGAGACCATGTTCCGAGCGGCGGCTCCGGGGCAGCTCCGGCGGGCGTGGTATGTGTGCAACAGAGAGAAAT TATGCGAATCACTCCAGGCTGTCTTTGTTCAGAGTTACCTTGATCAAGGAACACAGATCTTCTTAAACAACAGCATTGAGAAATCGGGCT GGCTATTTATCCAATTATATCATTCTTTTGTGTCATCTGTTTTTAGCCTGTTTATGTCTAGAACATCTATCAATGGGTTGCTAGGAAGAG GCTCAATGTTTGTGTTTTCACCAGATCAGTTTCAGAGACTGCTTAAAATTAATCCAGACTGGAAAACCCACAGACTTCTTGATTTAGGTG CTGGAGATGGAGAAGTCACAAAAATCATGAGCCCTCATTTTGAAGAAATCTATGCCACTGAGCTTTCTGAAACTATGATATGGCAGCTTC AGAAAAAGAAATACAGAGTCCTTGGTATAAATGAATGGCAGAATACGGGGTTCCAGTATGATGTCATCAGCTGCCTGAACTTGCTGGACC GCTGTGATCAGCCCCTGACTTTGTTAAAAGATATCAGAAGTGTCTTGGAGCCAACTAGAGGCAGGGTCATCCTTGCCCTTGTCCTCCCCT TTCATCCCTATGTGGAAAACGTAGGTGGCAAGTGGGAGAAACCATCAGAAATTTTGGAAATCAAAGGACAGAACTGGGAAGAACAAGTGA ATAGTCTGCCTGAAGTTTTCAGAAAAGCTGGTTTTGTTATCGAAGCTTTCACCAGACTACCATACCTGTGTGAAGGCGACATGTATAATG ACTACTACGTTCTGGATGACGCTGTCTTTGTTCTCAAACCAGTATAAACACGTGGAGGTCGAAGTCTTCAGAGTCCGCACCCTCCGGGAT GTGCCCTTGGAAGAGGGTCTGTGTTCACAATTACGTGAAGGGAGGACCCTTGGGGACCGCCATTCTAAATATCATGTAGGAATTTAAAAA GCCAAAATACTAATTATTTCTTTGTAGTGTGTAAAGGAATGTTTTTAAAAGACAAAAACCCAACTCTTTGTGGATTTTTATCAACTCTTT ACTCAGAGCCACTCTCCAATGCAGGTCACACTCCAATTATGATGGAAGATATTTTTTATACTTAATTGCAGTAGGGACTCATTCCCAGAC AAAGCAATAGTCACGACTTCATGGAACCAATCAATGGATTGTTTTTTGAAGACTGGCAATAAAGCTGTCCATTCAATTCCAAATACTGGT TTTAAGGTATAGCCACTGATATTCTTTCATGTTTAGAAATTCTTTCTGTTATTATTCAAGAAAATGTTTTTAATCATGCTAATAAACTTT TTTGGAGATGACTTTGGCATCATGTTTGAATTCATATAAAGCTCCCCTAGCATTTTTTATTGGTTTGGCTTCAGGAGTACCCAAATAGTA GCATTATGAGAATGACGCAGACAATTTGAATAGGGGGGAAGGAAGGCTTCAGACTTGGGGGAAGGGGAGATTATTGCAAATTGCAGTGAA CACTGAGTCAGTAAAAAAAAAAAACAGAAACAAAAACCCAGCCTCATTCAGATACAGAACTTCAGGGACCCCTCCCCCCACCCCCCCAGT TAATGCTGCTGTGAAAAATGCAAAATAACCTGGTTCTGACTTTGTGATCACTCATGTCCCATACACTGAACTTTGTTTTTTTCTGGACAA TCTCAGGTTCTCAGAATTGAAACATTCAGTTTTGTCTACTGACAAAATGCAACTAAAAATGTTTTAATTCAACTTCTTACTCTACACTTA TATACCTCTCTCCCAGAGCTTGGCTCTTCCCTGAAATCCTTAAAGGAGTTTATTATTTGCCAAGAATATGGTTTGATGAAGACCGTGTCA GACTCATGCATTCTGGAATCCGTGAGTGCCTCCAACCATAAACCCAGAAATGCTGCCATAGAGGAACCCATTAGCAAGATCAATAACCAT CGTGGATATTCCAAAGAGCAGAGCATTTAACCCAGAATCTGAAATCTCAGTAATAACAGAAATGTCAATATGAGATTGTGGTTATTAACA ATATGTTATCCTCACTACTTTATTTCTTTTTTCATCCAGGTGTTTCATTAAGTATTCTCATTTATATGCTCATAGAAGTCATCAGATCAA CACATTCACTCCAACACCTGGGTATAAAGGCGAATTAAAACCTGAAGAATTACTTTATTATTCATTAAGAACTGCATTCCCACATCCTCA CACCAATATCTTCCACTGTTACTGTGCAGTCATAATAAGAGTTGGGTTATGTGATTTATGCAAAATTGTTATTGGTGTGTTCTAATGATT TTTTTCCAGGAATTCAAGTAAGTGAAGTACAAATACTTAGCACCATAGATTGTAAAAATAGAAAGAGGAAATGAGAAAACTTAATGTCGT TCTTGTACAGTTGAGTTTTGCTTCTTTATAAACTGTCTGTTAAAATCAGGGGTTGCTGTTAGACTGTCAAGCAGAAGTGATGGATGTTCA AGGAGGCAGGTTGCCCCAAAGTGTTTTCTAACTTTCAAGTAGAGAACTTTATGCTCTAATAAGAAAAATACAACTCATTCTTAACCACCC CCCCAAAACAGAGAAAACACATACATTTATGCATTTTAAAGATAAAAAGTAGTTTCTCAAAAAAATCTGAAGTTCTCTGAAAACCAGCTT ATTAAAAGTGCTGTTTTGTGGTGAAAATTGAAACCAAATCCACTCACATTTCCTATCGGGTCTTGAAATTCTTGGTGGTGTGTCACCATT CCACTAGATGGCAGTGTTGCTTACTGAGTGTCAATGGCTTTTTTCCCCGTAAATGGAATCATGTTTTTCTCCCCCAAAGTACAATAAAGC >In-frame_ENST00000559602_ENST00000358154_TCGA-MH-A55Z-01A_ETFA_chr15_76603691_-_METTL9_chr16_21623966_length(amino acids)=276AA_start in transcript=26_stop in transcript=856 MFRAAAPGQLRRAWYVCNREKLCESLQAVFVQSYLDQGTQIFLNNSIEKSGWLFIQLYHSFVSSVFSLFMSRTSINGLLGRGSMFVFSPD QFQRLLKINPDWKTHRLLDLGAGDGEVTKIMSPHFEEIYATELSETMIWQLQKKKYRVLGINEWQNTGFQYDVISCLNLLDRCDQPLTLL KDIRSVLEPTRGRVILALVLPFHPYVENVGGKWEKPSEILEIKGQNWEEQVNSLPEVFRKAGFVIEAFTRLPYLCEGDMYNDYYVLDDAV -------------------------------------------------------------- >In-frame_ENST00000559602_ENST00000396014_TCGA-MH-A55Z-01A_ETFA_chr15_76603691_-_METTL9_chr16_21623966_length(transcript)=1541nt_BP=65nt CCGAGGTTGCGGCGGAAGCGGAGACCATGTTCCGAGCGGCGGCTCCGGGGCAGCTCCGGCGGGCGTGGTATGTGTGCAACAGAGAGAAAT TATGCGAATCACTCCAGGCTGTCTTTGTTCAGAGTTACCTTGATCAAGGAACACAGATCTTCTTAAACAACAGCATTGAGAAATCGGGCT GGCTATTTATCCAATTATATCATTCTTTTGTGTCATCTGTTTTTAGCCTGTTTATGTCTAGAACATCTATCAATGGGTTGCTAGGAAGAG GCTCAATGTTTGTGTTTTCACCAGATCAGTTTCAGAGACTGCTTAAAATTAATCCAGACTGGAAAACCCACAGACTTCTTGATTTAGGTG CTGGAGATGGAGAAGTCACAAAAATCATGAGCCCTCATTTTGAAGAAATCTATGCCACTGAGCTTTCTGAAACTATGATATGGCAGCTTC AGAAAAAGAAATACAGAGTCCTTGGTATAAATGAATGGCAGAATACGGGGTTCCAGTATGATGTCATCAGCTGCCTGAACTTGCTGGACC GCTGTGATCAGCCCCTGACTTTGTTAAAAGATATCAGAAGTGTCTTGGAGCCAACTAGAGGCAGGGTCATCCTTGCCCTTGTCCTCCCCT TTCATCCCTATGTGGAAAACGGTGGCAAGTGGGAGAAACCATCAGAAATTTTGGAAATCAAAGGACAGAACTGGGAAGAACAAGTGAATA GTCTGCCTGAAGTTTTCAGAAAAGCTGGTTTTGTTATCGAAGCTTTCACCAGACTACCATACCTGTGTGAAGGCGACATGTATAATGACT ACTACGTTCTGGATGACGCTGTCTTTGTTCTCAAACCAGTATAAACACGTGGAGGTCGAAGTCTTCAGAGTCCGCACCCTCCGGGATGTG CCCTTGGAAGAGGGTCTGTGTTCACAATTACGTGAAGGGAGGACCCTTGGGGACCGCCATTCTAAATATCATGTAGGAATTTAAAAAGCC AAAATACTAATTATTTCTTTGTAGTGTGTAAAGGAATGTTTTTAAAAGACAAAAACCCAACTCTTTGTGGATTTTTATCAACTCTTTACT CAGAGCCACTCTCCAATGCAGGTCACACTCCAATTATGATGGAAGATATTTTTTATACTTAATTGCAGTAGGGACTCATTCCCAGACAAA GCAATAGTCACGACTTCATGGAACCAATCAATGGATTGTTTTTTGAAGACTGGCAATAAAGCTGTCCATTCAATTCCAAATACTGGTTTT AAGGTATAGCCACTGATATTCTTTCATGTTTAGAAATTCTTTCTGTTATTATTCAAGAAAATGTTTTTAATCATGCTAATAAACTTTTTT GGAGATGACTTTGGCATCATGTTTGAATTCATATAAAGCTCCCCTAGCATTTTTTATTGGTTTGGCTTCAGGAGTACCCAAATAGTAGCA TTATGAGAATGACGCAGACAATTTGAATAGGGGGGAAGGAAGGCTTCAGACTTGGGGGAAGGGGAGATTATTGCAAATTGCAGTGAACAC >In-frame_ENST00000559602_ENST00000396014_TCGA-MH-A55Z-01A_ETFA_chr15_76603691_-_METTL9_chr16_21623966_length(amino acids)=275AA_start in transcript=26_stop in transcript=853 MFRAAAPGQLRRAWYVCNREKLCESLQAVFVQSYLDQGTQIFLNNSIEKSGWLFIQLYHSFVSSVFSLFMSRTSINGLLGRGSMFVFSPD QFQRLLKINPDWKTHRLLDLGAGDGEVTKIMSPHFEEIYATELSETMIWQLQKKKYRVLGINEWQNTGFQYDVISCLNLLDRCDQPLTLL KDIRSVLEPTRGRVILALVLPFHPYVENGGKWEKPSEILEIKGQNWEEQVNSLPEVFRKAGFVIEAFTRLPYLCEGDMYNDYYVLDDAVF -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for ETFA-METTL9 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for ETFA-METTL9 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for ETFA-METTL9 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | ETFA | C0268596 | Multiple Acyl Coenzyme A Dehydrogenase Deficiency | 11 | CLINGEN;CTD_human;GENOMICS_ENGLAND;UNIPROT |
Hgene | ETFA | C0029408 | Degenerative polyarthritis | 1 | CTD_human |
Hgene | ETFA | C0086743 | Osteoarthrosis Deformans | 1 | CTD_human |
Hgene | ETFA | C0369183 | Erythrocyte Mean Corpuscular Hemoglobin Test | 1 | GENOMICS_ENGLAND |
Hgene | ETFA | C1261502 | Finding of Mean Corpuscular Hemoglobin | 1 | GENOMICS_ENGLAND |
Hgene | ETFA | C2239176 | Liver carcinoma | 1 | CTD_human |
Hgene | ETFA | C3278154 | GLUTARIC ACIDEMIA IIA | 1 | GENOMICS_ENGLAND |
Hgene | ETFA | C4317009 | Diverticular Diseases | 1 | CTD_human |
Hgene | ETFA | C4505353 | Diverticular Bleeding | 1 | CTD_human |