FusionGDB Logo

Home

Download

Statistics

Examples

Help

Contact
Center for Computational Systems Medicine
leaf

Fusion Gene Summary

leaf

Fusion Gene ORF analysis

leaf

Fusion Genomic Features

leaf

Fusion Protein Features

leaf

Fusion Gene Sequence

leaf

Fusion Gene PPI analysis

leaf

Related Drugs

leaf

Related Diseases

Fusion gene:FAF1-TTC39A (FusionGDB2 ID:28172)

Fusion Gene Summary for FAF1-TTC39A

check button Fusion gene summary
Fusion gene informationFusion gene name: FAF1-TTC39A
Fusion gene ID: 28172
HgeneTgene
Gene symbol

FAF1

TTC39A

Gene ID

11124

22996

Gene nameFas associated factor 1tetratricopeptide repeat domain 39A
SynonymsCGI-03|HFAF1s|UBXD12|UBXN3A|hFAF1C1orf34|DEME-6
Cytomap

1p32.3

1p32.3

Type of geneprotein-codingprotein-coding
DescriptionFAS-associated factor 1Fas (TNFRSF6) associated factor 1TNFRSF6-associated factor 1UBX domain protein 3AUBX domain-containing protein 12UBX domain-containing protein 3Atetratricopeptide repeat protein 39ATPR repeat protein 39Adifferentially expressed in MCF7 with estradiol protein 6testicular tissue protein Li 213
Modification date2020031320200313
UniProtAcc

Q9UNN5

.
Ensembl transtripts involved in fusion geneENST00000396153, ENST00000371778, 
ENST00000545823, ENST00000472808, 
ENST00000447632, ENST00000413473, 
ENST00000262675, ENST00000451380, 
ENST00000371750, ENST00000371747, 
ENST00000262676, ENST00000530004, 
ENST00000534098, 
Fusion gene scores* DoF score23 X 21 X 9=43476 X 6 X 4=144
# samples 316
** MAII scorelog2(31/4347*10)=-3.80967997500385
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(6/144*10)=-1.26303440583379
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: FAF1 [Title/Abstract] AND TTC39A [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointFAF1(51121114)-TTC39A(51761842), # samples:3
Anticipated loss of major functional domain due to fusion event.FAF1-TTC39A seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneFAF1

GO:0010942

positive regulation of cell death

15596450


check buttonFusion gene breakpoints across FAF1 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonFusion gene breakpoints across TTC39A (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4PRADTCGA-ZG-A9KY-01AFAF1chr1

51121114

-TTC39Achr1

51761842

-
ChimerDB4PRADTCGA-ZG-A9KYFAF1chr1

51121114

-TTC39Achr1

51761842

-
ChimerDB4PRADTCGA-ZG-A9KY-01AFAF1chr1

51121114

-TTC39Achr1

51761842

-


Top

Fusion Gene ORF analysis for FAF1-TTC39A

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000396153ENST00000447632FAF1chr1

51121114

-TTC39Achr1

51761842

-
In-frameENST00000396153ENST00000413473FAF1chr1

51121114

-TTC39Achr1

51761842

-
In-frameENST00000396153ENST00000262675FAF1chr1

51121114

-TTC39Achr1

51761842

-
In-frameENST00000396153ENST00000451380FAF1chr1

51121114

-TTC39Achr1

51761842

-
In-frameENST00000396153ENST00000371750FAF1chr1

51121114

-TTC39Achr1

51761842

-
In-frameENST00000396153ENST00000371747FAF1chr1

51121114

-TTC39Achr1

51761842

-
5CDS-intronENST00000396153ENST00000262676FAF1chr1

51121114

-TTC39Achr1

51761842

-
5CDS-5UTRENST00000396153ENST00000530004FAF1chr1

51121114

-TTC39Achr1

51761842

-
5CDS-intronENST00000396153ENST00000534098FAF1chr1

51121114

-TTC39Achr1

51761842

-
Frame-shiftENST00000371778ENST00000447632FAF1chr1

51121114

-TTC39Achr1

51761842

-
Frame-shiftENST00000371778ENST00000413473FAF1chr1

51121114

-TTC39Achr1

51761842

-
Frame-shiftENST00000371778ENST00000262675FAF1chr1

51121114

-TTC39Achr1

51761842

-
Frame-shiftENST00000371778ENST00000451380FAF1chr1

51121114

-TTC39Achr1

51761842

-
Frame-shiftENST00000371778ENST00000371750FAF1chr1

51121114

-TTC39Achr1

51761842

-
Frame-shiftENST00000371778ENST00000371747FAF1chr1

51121114

-TTC39Achr1

51761842

-
5CDS-intronENST00000371778ENST00000262676FAF1chr1

51121114

-TTC39Achr1

51761842

-
5CDS-5UTRENST00000371778ENST00000530004FAF1chr1

51121114

-TTC39Achr1

51761842

-
5CDS-intronENST00000371778ENST00000534098FAF1chr1

51121114

-TTC39Achr1

51761842

-
intron-3CDSENST00000545823ENST00000447632FAF1chr1

51121114

-TTC39Achr1

51761842

-
intron-3CDSENST00000545823ENST00000413473FAF1chr1

51121114

-TTC39Achr1

51761842

-
intron-3CDSENST00000545823ENST00000262675FAF1chr1

51121114

-TTC39Achr1

51761842

-
intron-3CDSENST00000545823ENST00000451380FAF1chr1

51121114

-TTC39Achr1

51761842

-
intron-3CDSENST00000545823ENST00000371750FAF1chr1

51121114

-TTC39Achr1

51761842

-
intron-3CDSENST00000545823ENST00000371747FAF1chr1

51121114

-TTC39Achr1

51761842

-
intron-intronENST00000545823ENST00000262676FAF1chr1

51121114

-TTC39Achr1

51761842

-
intron-5UTRENST00000545823ENST00000530004FAF1chr1

51121114

-TTC39Achr1

51761842

-
intron-intronENST00000545823ENST00000534098FAF1chr1

51121114

-TTC39Achr1

51761842

-
intron-3CDSENST00000472808ENST00000447632FAF1chr1

51121114

-TTC39Achr1

51761842

-
intron-3CDSENST00000472808ENST00000413473FAF1chr1

51121114

-TTC39Achr1

51761842

-
intron-3CDSENST00000472808ENST00000262675FAF1chr1

51121114

-TTC39Achr1

51761842

-
intron-3CDSENST00000472808ENST00000451380FAF1chr1

51121114

-TTC39Achr1

51761842

-
intron-3CDSENST00000472808ENST00000371750FAF1chr1

51121114

-TTC39Achr1

51761842

-
intron-3CDSENST00000472808ENST00000371747FAF1chr1

51121114

-TTC39Achr1

51761842

-
intron-intronENST00000472808ENST00000262676FAF1chr1

51121114

-TTC39Achr1

51761842

-
intron-5UTRENST00000472808ENST00000530004FAF1chr1

51121114

-TTC39Achr1

51761842

-
intron-intronENST00000472808ENST00000534098FAF1chr1

51121114

-TTC39Achr1

51761842

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000396153FAF1chr151121114-ENST00000447632TTC39Achr151761842-277611961401876578
ENST00000396153FAF1chr151121114-ENST00000413473TTC39Achr151761842-277611961401876578
ENST00000396153FAF1chr151121114-ENST00000262675TTC39Achr151761842-222211961401876578
ENST00000396153FAF1chr151121114-ENST00000451380TTC39Achr151761842-222211961401876578
ENST00000396153FAF1chr151121114-ENST00000371750TTC39Achr151761842-206411961401876578
ENST00000396153FAF1chr151121114-ENST00000371747TTC39Achr151761842-182911961401318392

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000396153ENST00000447632FAF1chr151121114-TTC39Achr151761842-0.001360880.99863917
ENST00000396153ENST00000413473FAF1chr151121114-TTC39Achr151761842-0.001360880.99863917
ENST00000396153ENST00000262675FAF1chr151121114-TTC39Achr151761842-0.0022438340.9977562
ENST00000396153ENST00000451380FAF1chr151121114-TTC39Achr151761842-0.0022438340.9977562
ENST00000396153ENST00000371750FAF1chr151121114-TTC39Achr151761842-0.0027995010.9972005
ENST00000396153ENST00000371747FAF1chr151121114-TTC39Achr151761842-0.0017037450.9982963

Top

Fusion Genomic Features for FAF1-TTC39A


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

Top

Fusion Protein Features for FAF1-TTC39A


check button Go to

FGviewer for the breakpoints of chr1:51121114-chr1:51761842

.
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
FAF1

Q9UNN5

.
FUNCTION: Ubiquitin-binding protein (PubMed:19722279). Required for the progression of DNA replication forks by targeting DNA replication licensing factor CDT1 for degradation (PubMed:26842564). Potentiates but cannot initiate FAS-induced apoptosis (By similarity). {ECO:0000250|UniProtKB:P54731, ECO:0000269|PubMed:19722279, ECO:0000269|PubMed:26842564}.FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneFAF1chr1:51121114chr1:51761842ENST00000371778-9201_57248.0651.0DomainUBA
HgeneFAF1chr1:51121114chr1:51761842ENST00000396153-8191_57248.0651.0DomainUBA
TgeneTTC39Achr1:51121114chr1:51761842ENST00000262676011315_3480421.0RepeatNote=TPR 1
TgeneTTC39Achr1:51121114chr1:51761842ENST00000262676011505_5380421.0RepeatNote=TPR 2
TgeneTTC39Achr1:51121114chr1:51761842ENST00000262676011546_5790421.0RepeatNote=TPR 3
TgeneTTC39Achr1:51121114chr1:51761842ENST000004134731118505_538355.0582.0RepeatNote=TPR 2
TgeneTTC39Achr1:51121114chr1:51761842ENST000004134731118546_579355.0582.0RepeatNote=TPR 3
TgeneTTC39Achr1:51121114chr1:51761842ENST000004476321118505_538387.0614.0RepeatNote=TPR 2
TgeneTTC39Achr1:51121114chr1:51761842ENST000004476321118546_579387.0614.0RepeatNote=TPR 3
TgeneTTC39Achr1:51121114chr1:51761842ENST000004513801118505_538351.0578.0RepeatNote=TPR 2
TgeneTTC39Achr1:51121114chr1:51761842ENST000004513801118546_579351.0578.0RepeatNote=TPR 3
TgeneTTC39Achr1:51121114chr1:51761842ENST0000053000407315_3480222.0RepeatNote=TPR 1
TgeneTTC39Achr1:51121114chr1:51761842ENST0000053000407505_5380222.0RepeatNote=TPR 2
TgeneTTC39Achr1:51121114chr1:51761842ENST0000053000407546_5790222.0RepeatNote=TPR 3

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneFAF1chr1:51121114chr1:51761842ENST00000371778-920569_646248.0651.0DomainUBX
HgeneFAF1chr1:51121114chr1:51761842ENST00000396153-819569_646248.0651.0DomainUBX
TgeneTTC39Achr1:51121114chr1:51761842ENST000004134731118315_348355.0582.0RepeatNote=TPR 1
TgeneTTC39Achr1:51121114chr1:51761842ENST000004476321118315_348387.0614.0RepeatNote=TPR 1
TgeneTTC39Achr1:51121114chr1:51761842ENST000004513801118315_348351.0578.0RepeatNote=TPR 1


Top

Fusion Gene Sequence for FAF1-TTC39A


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>In-frame_ENST00000396153_ENST00000447632_TCGA-ZG-A9KY-01A_FAF1_chr1_51121114_-_TTC39A_chr1_51761842_length(transcript)=2776nt_BP=1196nt
AGGGGCGGAGGCGGCGGCCAGGGAGGAAGCGGAGGAGGCGGAGGCGGCCGCGGCGTTCGCCCGCCCGCTCGCTCGCTCGGTTTCCCCGCC
CCCGCCGGGCTTAACGCCGCTGAAGGTATCCGGGTGCGCGCTGTCGCAACCTGCCCTCATCCTGGCCCGCGACTGTAAGACCGGACCCAC
ATCCAGACCAATCTTCCTGTCCGGGCTGCTGCGACGCGGGCTCCGCAGGTTGCAGGCGGGCGGCCGGGGCGCCTGAAGGTTACCGAGTGC
ATGAGCGCCTAGCGCTTCCCGCGCTGCCCCGCCCGCTGGCCCGCCGACCCGCCCGCCGGCTCGCCCGCCAGCCCCTCGGCGCCCGGCGGC
GGCGGCGGCGGTGGCGGCGACGGTCGCAGGAGGTGCCGTCTGCCTCCCAGGTGCGCGCTTCGCTCCCGGAGCCGCGGAACTCGGCGGCCG
CCATGGCGTCCAACATGGACCGGGAGATGATCCTGGCGGATTTTCAGGCATGTACTGGCATTGAAAACATTGACGAAGCTATTACATTGC
TTGAACAAAATAATTGGGACTTAGTGGCAGCTATCAATGGTGTAATACCACAGGAAAATGGCATTCTACAAAGTGAATATGGAGGTGAGA
CCATACCAGGACCTGCATTTAATCCAGCAAGTCATCCAGCTTCAGCTCCTACTTCCTCTTCTTCTTCAGCGTTTCGACCTGTAATGCCAT
CCAGGCAGATTGTAGAAAGGCAACCTCGGATGCTGGACTTCAGGGTTGAATACAGAGACAGAAATGTTGATGTGGTACTTGAAGACACCT
GTACTGTTGGAGAGATTAAACAGATTCTAGAAAATGAACTTCAGATACCTGTGTCCAAAATGCTGTTAAAAGGCTGGAAGACGGGAGATG
TGGAAGACAGTACGGTCCTAAAATCTCTACACTTGCCAAAAAACAACAGTCTTTATGTCCTTACACCAGATTTGCCACCACCTTCATCAT
CTAGTCATGCTGGTGCCCTGCAGGAGTCATTAAATCAAAACTTCATGCTGATCATCACCCACCGAGAAGTCCAGCGGGAGTACAACCTGA
ACTTCTCAGGAAGCAGTACTATTCAAGAGGTAAAGAGAAATGTGTATGACCTTACAAGTATCCCCGTTCGCCACCAATTATGGGAGGGCT
GGCCAACTTCTGCTACAGACGACTCAGCCACCTACATTTACATGAAGGCCGCCTACCTCAGCATGTTTGGGAAGGAGGACCACAAGCCGT
TCGGGGACGACGAAGTGGAATTATTTCGAGCTGTGCCAGGCCTGAAGCTCAAGATTGCTGGGAAATCTCTACCCACAGAGAAGTTTGCCA
TCCGGAAGTCCCGGCGCTACTTCTCCTCCAACCCTATCTCGCTGCCAGTGCCTGCTCTGGAAATGATGTACATCTGGAACGGCTACGCCG
TGATTGGGAAGCAGCCGAAACTCACGGATGGGATACTTGAGATTATCACTAAGGCTGAAGAGATGCTGGAGAAAGGCCCAGAGAACGAGT
ACTCAGTGGATGACGAGTGCTTGGTGAAATTGTTGAAAGGCCTGTGTCTGAAATACCTGGGCCGTGTCCAGGAGGCCGAGGAGAATTTTA
GGAGCATCTCTGCCAATGAAAAGAAGATTAAATATGACCACTACTTGATCCCAAACGCCCTGCTGGAGCTGGCCCTGCTGCTTATGGAGC
AAGACAGAAACGAAGAGGCCATCAAACTTTTGGAATCTGCCAAGCAAAACTACAAGAATTACTCCATGGAGTCAAGGACACACTTTCGAA
TCCAGGCAGCCACACTCCAAGCCAAGTCTTCCCTAGAGAACAGCAGCAGATCCATGGTCTCATCAGTGTCCTTGTAGCTTTGTGCAGCAG
TTCCGGGCTGGAAGACAGAGACAGCTGGACAGAGCTCCTGAAAACATTTCAAAATACCCCCTCCCCCTGCCCTGCCCTGCCTTTGGGGTC
CACCGGCACTCCAGTTGGATGGCACAACATAGTGTATCCGTGCAGAAGCCGAGCTGGCATTTTCACCAGTGTAGCCAAGGGCCTTTGCCA
AGGGCAGAGCAGGTGGAGCCCTCTGCCTGCCCTATCACACATACGGGTACTTGCTTTTCACTGTGATGTTTAAGAGAATGTATGAACAGT
TTACATTTTCCTTAGAAATACATTGATGGGATCACAGTTGGCTTTAAAAACCAACAACAATCAACCACCTGTAAGTCTTTGTCTTCACCT
ATTATCATCTGGAGGTAAATCTCTTTATATGATGATGCCAAAGGGCAAATTGCTTTTCAAATTCAGCAAGTTCTCAGCTTGTGTGACGGA
AGGTCCTTCAGAGGACCTGAGGAATGCCTGGGAGAGGCTAAGCCTCAGGCTTCAATGCTTCTGGGGTTGGGCATGAGGATGTACACAGAC
ACCCACTACCTTACTACTCACACTTCATTTCACTCCTTTTGTAAATTTCCAATTTAAAAATCAAGCACGTCTTTTTAGTGAGATAAAATC
TGAGCTCTTCTGTAGAAAAATCAATCTCTACCAGTAGAAAATGCCAGGGCTTGATGGAAGAGCTGTGTAGCCCTTTCTATGCCAAAGCCA
GGAAATTTGGGGGGCAGGAGGAGGTTCTCAGAATCCAGTCTGTATCTTTGCTGTATGCCAAACTGAAACCACTGGGAATAATTTATGAAA

>In-frame_ENST00000396153_ENST00000447632_TCGA-ZG-A9KY-01A_FAF1_chr1_51121114_-_TTC39A_chr1_51761842_length(amino acids)=578AA_start in transcript=140_stop in transcript=1876
MPSSWPATVRPDPHPDQSSCPGCCDAGSAGCRRAAGAPEGYRVHERLALPALPRPLARRPARRLARQPLGARRRRRRWRRRSQEVPSASQ
VRASLPEPRNSAAAMASNMDREMILADFQACTGIENIDEAITLLEQNNWDLVAAINGVIPQENGILQSEYGGETIPGPAFNPASHPASAP
TSSSSSAFRPVMPSRQIVERQPRMLDFRVEYRDRNVDVVLEDTCTVGEIKQILENELQIPVSKMLLKGWKTGDVEDSTVLKSLHLPKNNS
LYVLTPDLPPPSSSSHAGALQESLNQNFMLIITHREVQREYNLNFSGSSTIQEVKRNVYDLTSIPVRHQLWEGWPTSATDDSATYIYMKA
AYLSMFGKEDHKPFGDDEVELFRAVPGLKLKIAGKSLPTEKFAIRKSRRYFSSNPISLPVPALEMMYIWNGYAVIGKQPKLTDGILEIIT
KAEEMLEKGPENEYSVDDECLVKLLKGLCLKYLGRVQEAEENFRSISANEKKIKYDHYLIPNALLELALLLMEQDRNEEAIKLLESAKQN

--------------------------------------------------------------
>In-frame_ENST00000396153_ENST00000413473_TCGA-ZG-A9KY-01A_FAF1_chr1_51121114_-_TTC39A_chr1_51761842_length(transcript)=2776nt_BP=1196nt
AGGGGCGGAGGCGGCGGCCAGGGAGGAAGCGGAGGAGGCGGAGGCGGCCGCGGCGTTCGCCCGCCCGCTCGCTCGCTCGGTTTCCCCGCC
CCCGCCGGGCTTAACGCCGCTGAAGGTATCCGGGTGCGCGCTGTCGCAACCTGCCCTCATCCTGGCCCGCGACTGTAAGACCGGACCCAC
ATCCAGACCAATCTTCCTGTCCGGGCTGCTGCGACGCGGGCTCCGCAGGTTGCAGGCGGGCGGCCGGGGCGCCTGAAGGTTACCGAGTGC
ATGAGCGCCTAGCGCTTCCCGCGCTGCCCCGCCCGCTGGCCCGCCGACCCGCCCGCCGGCTCGCCCGCCAGCCCCTCGGCGCCCGGCGGC
GGCGGCGGCGGTGGCGGCGACGGTCGCAGGAGGTGCCGTCTGCCTCCCAGGTGCGCGCTTCGCTCCCGGAGCCGCGGAACTCGGCGGCCG
CCATGGCGTCCAACATGGACCGGGAGATGATCCTGGCGGATTTTCAGGCATGTACTGGCATTGAAAACATTGACGAAGCTATTACATTGC
TTGAACAAAATAATTGGGACTTAGTGGCAGCTATCAATGGTGTAATACCACAGGAAAATGGCATTCTACAAAGTGAATATGGAGGTGAGA
CCATACCAGGACCTGCATTTAATCCAGCAAGTCATCCAGCTTCAGCTCCTACTTCCTCTTCTTCTTCAGCGTTTCGACCTGTAATGCCAT
CCAGGCAGATTGTAGAAAGGCAACCTCGGATGCTGGACTTCAGGGTTGAATACAGAGACAGAAATGTTGATGTGGTACTTGAAGACACCT
GTACTGTTGGAGAGATTAAACAGATTCTAGAAAATGAACTTCAGATACCTGTGTCCAAAATGCTGTTAAAAGGCTGGAAGACGGGAGATG
TGGAAGACAGTACGGTCCTAAAATCTCTACACTTGCCAAAAAACAACAGTCTTTATGTCCTTACACCAGATTTGCCACCACCTTCATCAT
CTAGTCATGCTGGTGCCCTGCAGGAGTCATTAAATCAAAACTTCATGCTGATCATCACCCACCGAGAAGTCCAGCGGGAGTACAACCTGA
ACTTCTCAGGAAGCAGTACTATTCAAGAGGTAAAGAGAAATGTGTATGACCTTACAAGTATCCCCGTTCGCCACCAATTATGGGAGGGCT
GGCCAACTTCTGCTACAGACGACTCAGCCACCTACATTTACATGAAGGCCGCCTACCTCAGCATGTTTGGGAAGGAGGACCACAAGCCGT
TCGGGGACGACGAAGTGGAATTATTTCGAGCTGTGCCAGGCCTGAAGCTCAAGATTGCTGGGAAATCTCTACCCACAGAGAAGTTTGCCA
TCCGGAAGTCCCGGCGCTACTTCTCCTCCAACCCTATCTCGCTGCCAGTGCCTGCTCTGGAAATGATGTACATCTGGAACGGCTACGCCG
TGATTGGGAAGCAGCCGAAACTCACGGATGGGATACTTGAGATTATCACTAAGGCTGAAGAGATGCTGGAGAAAGGCCCAGAGAACGAGT
ACTCAGTGGATGACGAGTGCTTGGTGAAATTGTTGAAAGGCCTGTGTCTGAAATACCTGGGCCGTGTCCAGGAGGCCGAGGAGAATTTTA
GGAGCATCTCTGCCAATGAAAAGAAGATTAAATATGACCACTACTTGATCCCAAACGCCCTGCTGGAGCTGGCCCTGCTGCTTATGGAGC
AAGACAGAAACGAAGAGGCCATCAAACTTTTGGAATCTGCCAAGCAAAACTACAAGAATTACTCCATGGAGTCAAGGACACACTTTCGAA
TCCAGGCAGCCACACTCCAAGCCAAGTCTTCCCTAGAGAACAGCAGCAGATCCATGGTCTCATCAGTGTCCTTGTAGCTTTGTGCAGCAG
TTCCGGGCTGGAAGACAGAGACAGCTGGACAGAGCTCCTGAAAACATTTCAAAATACCCCCTCCCCCTGCCCTGCCCTGCCTTTGGGGTC
CACCGGCACTCCAGTTGGATGGCACAACATAGTGTATCCGTGCAGAAGCCGAGCTGGCATTTTCACCAGTGTAGCCAAGGGCCTTTGCCA
AGGGCAGAGCAGGTGGAGCCCTCTGCCTGCCCTATCACACATACGGGTACTTGCTTTTCACTGTGATGTTTAAGAGAATGTATGAACAGT
TTACATTTTCCTTAGAAATACATTGATGGGATCACAGTTGGCTTTAAAAACCAACAACAATCAACCACCTGTAAGTCTTTGTCTTCACCT
ATTATCATCTGGAGGTAAATCTCTTTATATGATGATGCCAAAGGGCAAATTGCTTTTCAAATTCAGCAAGTTCTCAGCTTGTGTGACGGA
AGGTCCTTCAGAGGACCTGAGGAATGCCTGGGAGAGGCTAAGCCTCAGGCTTCAATGCTTCTGGGGTTGGGCATGAGGATGTACACAGAC
ACCCACTACCTTACTACTCACACTTCATTTCACTCCTTTTGTAAATTTCCAATTTAAAAATCAAGCACGTCTTTTTAGTGAGATAAAATC
TGAGCTCTTCTGTAGAAAAATCAATCTCTACCAGTAGAAAATGCCAGGGCTTGATGGAAGAGCTGTGTAGCCCTTTCTATGCCAAAGCCA
GGAAATTTGGGGGGCAGGAGGAGGTTCTCAGAATCCAGTCTGTATCTTTGCTGTATGCCAAACTGAAACCACTGGGAATAATTTATGAAA

>In-frame_ENST00000396153_ENST00000413473_TCGA-ZG-A9KY-01A_FAF1_chr1_51121114_-_TTC39A_chr1_51761842_length(amino acids)=578AA_start in transcript=140_stop in transcript=1876
MPSSWPATVRPDPHPDQSSCPGCCDAGSAGCRRAAGAPEGYRVHERLALPALPRPLARRPARRLARQPLGARRRRRRWRRRSQEVPSASQ
VRASLPEPRNSAAAMASNMDREMILADFQACTGIENIDEAITLLEQNNWDLVAAINGVIPQENGILQSEYGGETIPGPAFNPASHPASAP
TSSSSSAFRPVMPSRQIVERQPRMLDFRVEYRDRNVDVVLEDTCTVGEIKQILENELQIPVSKMLLKGWKTGDVEDSTVLKSLHLPKNNS
LYVLTPDLPPPSSSSHAGALQESLNQNFMLIITHREVQREYNLNFSGSSTIQEVKRNVYDLTSIPVRHQLWEGWPTSATDDSATYIYMKA
AYLSMFGKEDHKPFGDDEVELFRAVPGLKLKIAGKSLPTEKFAIRKSRRYFSSNPISLPVPALEMMYIWNGYAVIGKQPKLTDGILEIIT
KAEEMLEKGPENEYSVDDECLVKLLKGLCLKYLGRVQEAEENFRSISANEKKIKYDHYLIPNALLELALLLMEQDRNEEAIKLLESAKQN

--------------------------------------------------------------
>In-frame_ENST00000396153_ENST00000262675_TCGA-ZG-A9KY-01A_FAF1_chr1_51121114_-_TTC39A_chr1_51761842_length(transcript)=2222nt_BP=1196nt
AGGGGCGGAGGCGGCGGCCAGGGAGGAAGCGGAGGAGGCGGAGGCGGCCGCGGCGTTCGCCCGCCCGCTCGCTCGCTCGGTTTCCCCGCC
CCCGCCGGGCTTAACGCCGCTGAAGGTATCCGGGTGCGCGCTGTCGCAACCTGCCCTCATCCTGGCCCGCGACTGTAAGACCGGACCCAC
ATCCAGACCAATCTTCCTGTCCGGGCTGCTGCGACGCGGGCTCCGCAGGTTGCAGGCGGGCGGCCGGGGCGCCTGAAGGTTACCGAGTGC
ATGAGCGCCTAGCGCTTCCCGCGCTGCCCCGCCCGCTGGCCCGCCGACCCGCCCGCCGGCTCGCCCGCCAGCCCCTCGGCGCCCGGCGGC
GGCGGCGGCGGTGGCGGCGACGGTCGCAGGAGGTGCCGTCTGCCTCCCAGGTGCGCGCTTCGCTCCCGGAGCCGCGGAACTCGGCGGCCG
CCATGGCGTCCAACATGGACCGGGAGATGATCCTGGCGGATTTTCAGGCATGTACTGGCATTGAAAACATTGACGAAGCTATTACATTGC
TTGAACAAAATAATTGGGACTTAGTGGCAGCTATCAATGGTGTAATACCACAGGAAAATGGCATTCTACAAAGTGAATATGGAGGTGAGA
CCATACCAGGACCTGCATTTAATCCAGCAAGTCATCCAGCTTCAGCTCCTACTTCCTCTTCTTCTTCAGCGTTTCGACCTGTAATGCCAT
CCAGGCAGATTGTAGAAAGGCAACCTCGGATGCTGGACTTCAGGGTTGAATACAGAGACAGAAATGTTGATGTGGTACTTGAAGACACCT
GTACTGTTGGAGAGATTAAACAGATTCTAGAAAATGAACTTCAGATACCTGTGTCCAAAATGCTGTTAAAAGGCTGGAAGACGGGAGATG
TGGAAGACAGTACGGTCCTAAAATCTCTACACTTGCCAAAAAACAACAGTCTTTATGTCCTTACACCAGATTTGCCACCACCTTCATCAT
CTAGTCATGCTGGTGCCCTGCAGGAGTCATTAAATCAAAACTTCATGCTGATCATCACCCACCGAGAAGTCCAGCGGGAGTACAACCTGA
ACTTCTCAGGAAGCAGTACTATTCAAGAGGTAAAGAGAAATGTGTATGACCTTACAAGTATCCCCGTTCGCCACCAATTATGGGAGGGCT
GGCCAACTTCTGCTACAGACGACTCAGCCACCTACATTTACATGAAGGCCGCCTACCTCAGCATGTTTGGGAAGGAGGACCACAAGCCGT
TCGGGGACGACGAAGTGGAATTATTTCGAGCTGTGCCAGGCCTGAAGCTCAAGATTGCTGGGAAATCTCTACCCACAGAGAAGTTTGCCA
TCCGGAAGTCCCGGCGCTACTTCTCCTCCAACCCTATCTCGCTGCCAGTGCCTGCTCTGGAAATGATGTACATCTGGAACGGCTACGCCG
TGATTGGGAAGCAGCCGAAACTCACGGATGGGATACTTGAGATTATCACTAAGGCTGAAGAGATGCTGGAGAAAGGCCCAGAGAACGAGT
ACTCAGTGGATGACGAGTGCTTGGTGAAATTGTTGAAAGGCCTGTGTCTGAAATACCTGGGCCGTGTCCAGGAGGCCGAGGAGAATTTTA
GGAGCATCTCTGCCAATGAAAAGAAGATTAAATATGACCACTACTTGATCCCAAACGCCCTGCTGGAGCTGGCCCTGCTGCTTATGGAGC
AAGACAGAAACGAAGAGGCCATCAAACTTTTGGAATCTGCCAAGCAAAACTACAAGAATTACTCCATGGAGTCAAGGACACACTTTCGAA
TCCAGGCAGCCACACTCCAAGCCAAGTCTTCCCTAGAGAACAGCAGCAGATCCATGGTCTCATCAGTGTCCTTGTAGCTTTGTGCAGCAG
TTCCGGGCTGGAAGACAGAGACAGCTGGACAGAGCTCCTGAAAACATTTCAAAATACCCCCTCCCCCTGCCCTGCCCTGCCTTTGGGGTC
CACCGGCACTCCAGTTGGATGGCACAACATAGTGTATCCGTGCAGAAGCCGAGCTGGCATTTTCACCAGTGTAGCCAAGGGCCTTTGCCA
AGGGCAGAGCAGGTGGAGCCCTCTGCCTGCCCTATCACACATACGGGTACTTGCTTTTCACTGTGATGTTTAAGAGAATGTATGAACAGT

>In-frame_ENST00000396153_ENST00000262675_TCGA-ZG-A9KY-01A_FAF1_chr1_51121114_-_TTC39A_chr1_51761842_length(amino acids)=578AA_start in transcript=140_stop in transcript=1876
MPSSWPATVRPDPHPDQSSCPGCCDAGSAGCRRAAGAPEGYRVHERLALPALPRPLARRPARRLARQPLGARRRRRRWRRRSQEVPSASQ
VRASLPEPRNSAAAMASNMDREMILADFQACTGIENIDEAITLLEQNNWDLVAAINGVIPQENGILQSEYGGETIPGPAFNPASHPASAP
TSSSSSAFRPVMPSRQIVERQPRMLDFRVEYRDRNVDVVLEDTCTVGEIKQILENELQIPVSKMLLKGWKTGDVEDSTVLKSLHLPKNNS
LYVLTPDLPPPSSSSHAGALQESLNQNFMLIITHREVQREYNLNFSGSSTIQEVKRNVYDLTSIPVRHQLWEGWPTSATDDSATYIYMKA
AYLSMFGKEDHKPFGDDEVELFRAVPGLKLKIAGKSLPTEKFAIRKSRRYFSSNPISLPVPALEMMYIWNGYAVIGKQPKLTDGILEIIT
KAEEMLEKGPENEYSVDDECLVKLLKGLCLKYLGRVQEAEENFRSISANEKKIKYDHYLIPNALLELALLLMEQDRNEEAIKLLESAKQN

--------------------------------------------------------------
>In-frame_ENST00000396153_ENST00000451380_TCGA-ZG-A9KY-01A_FAF1_chr1_51121114_-_TTC39A_chr1_51761842_length(transcript)=2222nt_BP=1196nt
AGGGGCGGAGGCGGCGGCCAGGGAGGAAGCGGAGGAGGCGGAGGCGGCCGCGGCGTTCGCCCGCCCGCTCGCTCGCTCGGTTTCCCCGCC
CCCGCCGGGCTTAACGCCGCTGAAGGTATCCGGGTGCGCGCTGTCGCAACCTGCCCTCATCCTGGCCCGCGACTGTAAGACCGGACCCAC
ATCCAGACCAATCTTCCTGTCCGGGCTGCTGCGACGCGGGCTCCGCAGGTTGCAGGCGGGCGGCCGGGGCGCCTGAAGGTTACCGAGTGC
ATGAGCGCCTAGCGCTTCCCGCGCTGCCCCGCCCGCTGGCCCGCCGACCCGCCCGCCGGCTCGCCCGCCAGCCCCTCGGCGCCCGGCGGC
GGCGGCGGCGGTGGCGGCGACGGTCGCAGGAGGTGCCGTCTGCCTCCCAGGTGCGCGCTTCGCTCCCGGAGCCGCGGAACTCGGCGGCCG
CCATGGCGTCCAACATGGACCGGGAGATGATCCTGGCGGATTTTCAGGCATGTACTGGCATTGAAAACATTGACGAAGCTATTACATTGC
TTGAACAAAATAATTGGGACTTAGTGGCAGCTATCAATGGTGTAATACCACAGGAAAATGGCATTCTACAAAGTGAATATGGAGGTGAGA
CCATACCAGGACCTGCATTTAATCCAGCAAGTCATCCAGCTTCAGCTCCTACTTCCTCTTCTTCTTCAGCGTTTCGACCTGTAATGCCAT
CCAGGCAGATTGTAGAAAGGCAACCTCGGATGCTGGACTTCAGGGTTGAATACAGAGACAGAAATGTTGATGTGGTACTTGAAGACACCT
GTACTGTTGGAGAGATTAAACAGATTCTAGAAAATGAACTTCAGATACCTGTGTCCAAAATGCTGTTAAAAGGCTGGAAGACGGGAGATG
TGGAAGACAGTACGGTCCTAAAATCTCTACACTTGCCAAAAAACAACAGTCTTTATGTCCTTACACCAGATTTGCCACCACCTTCATCAT
CTAGTCATGCTGGTGCCCTGCAGGAGTCATTAAATCAAAACTTCATGCTGATCATCACCCACCGAGAAGTCCAGCGGGAGTACAACCTGA
ACTTCTCAGGAAGCAGTACTATTCAAGAGGTAAAGAGAAATGTGTATGACCTTACAAGTATCCCCGTTCGCCACCAATTATGGGAGGGCT
GGCCAACTTCTGCTACAGACGACTCAGCCACCTACATTTACATGAAGGCCGCCTACCTCAGCATGTTTGGGAAGGAGGACCACAAGCCGT
TCGGGGACGACGAAGTGGAATTATTTCGAGCTGTGCCAGGCCTGAAGCTCAAGATTGCTGGGAAATCTCTACCCACAGAGAAGTTTGCCA
TCCGGAAGTCCCGGCGCTACTTCTCCTCCAACCCTATCTCGCTGCCAGTGCCTGCTCTGGAAATGATGTACATCTGGAACGGCTACGCCG
TGATTGGGAAGCAGCCGAAACTCACGGATGGGATACTTGAGATTATCACTAAGGCTGAAGAGATGCTGGAGAAAGGCCCAGAGAACGAGT
ACTCAGTGGATGACGAGTGCTTGGTGAAATTGTTGAAAGGCCTGTGTCTGAAATACCTGGGCCGTGTCCAGGAGGCCGAGGAGAATTTTA
GGAGCATCTCTGCCAATGAAAAGAAGATTAAATATGACCACTACTTGATCCCAAACGCCCTGCTGGAGCTGGCCCTGCTGCTTATGGAGC
AAGACAGAAACGAAGAGGCCATCAAACTTTTGGAATCTGCCAAGCAAAACTACAAGAATTACTCCATGGAGTCAAGGACACACTTTCGAA
TCCAGGCAGCCACACTCCAAGCCAAGTCTTCCCTAGAGAACAGCAGCAGATCCATGGTCTCATCAGTGTCCTTGTAGCTTTGTGCAGCAG
TTCCGGGCTGGAAGACAGAGACAGCTGGACAGAGCTCCTGAAAACATTTCAAAATACCCCCTCCCCCTGCCCTGCCCTGCCTTTGGGGTC
CACCGGCACTCCAGTTGGATGGCACAACATAGTGTATCCGTGCAGAAGCCGAGCTGGCATTTTCACCAGTGTAGCCAAGGGCCTTTGCCA
AGGGCAGAGCAGGTGGAGCCCTCTGCCTGCCCTATCACACATACGGGTACTTGCTTTTCACTGTGATGTTTAAGAGAATGTATGAACAGT

>In-frame_ENST00000396153_ENST00000451380_TCGA-ZG-A9KY-01A_FAF1_chr1_51121114_-_TTC39A_chr1_51761842_length(amino acids)=578AA_start in transcript=140_stop in transcript=1876
MPSSWPATVRPDPHPDQSSCPGCCDAGSAGCRRAAGAPEGYRVHERLALPALPRPLARRPARRLARQPLGARRRRRRWRRRSQEVPSASQ
VRASLPEPRNSAAAMASNMDREMILADFQACTGIENIDEAITLLEQNNWDLVAAINGVIPQENGILQSEYGGETIPGPAFNPASHPASAP
TSSSSSAFRPVMPSRQIVERQPRMLDFRVEYRDRNVDVVLEDTCTVGEIKQILENELQIPVSKMLLKGWKTGDVEDSTVLKSLHLPKNNS
LYVLTPDLPPPSSSSHAGALQESLNQNFMLIITHREVQREYNLNFSGSSTIQEVKRNVYDLTSIPVRHQLWEGWPTSATDDSATYIYMKA
AYLSMFGKEDHKPFGDDEVELFRAVPGLKLKIAGKSLPTEKFAIRKSRRYFSSNPISLPVPALEMMYIWNGYAVIGKQPKLTDGILEIIT
KAEEMLEKGPENEYSVDDECLVKLLKGLCLKYLGRVQEAEENFRSISANEKKIKYDHYLIPNALLELALLLMEQDRNEEAIKLLESAKQN

--------------------------------------------------------------
>In-frame_ENST00000396153_ENST00000371750_TCGA-ZG-A9KY-01A_FAF1_chr1_51121114_-_TTC39A_chr1_51761842_length(transcript)=2064nt_BP=1196nt
AGGGGCGGAGGCGGCGGCCAGGGAGGAAGCGGAGGAGGCGGAGGCGGCCGCGGCGTTCGCCCGCCCGCTCGCTCGCTCGGTTTCCCCGCC
CCCGCCGGGCTTAACGCCGCTGAAGGTATCCGGGTGCGCGCTGTCGCAACCTGCCCTCATCCTGGCCCGCGACTGTAAGACCGGACCCAC
ATCCAGACCAATCTTCCTGTCCGGGCTGCTGCGACGCGGGCTCCGCAGGTTGCAGGCGGGCGGCCGGGGCGCCTGAAGGTTACCGAGTGC
ATGAGCGCCTAGCGCTTCCCGCGCTGCCCCGCCCGCTGGCCCGCCGACCCGCCCGCCGGCTCGCCCGCCAGCCCCTCGGCGCCCGGCGGC
GGCGGCGGCGGTGGCGGCGACGGTCGCAGGAGGTGCCGTCTGCCTCCCAGGTGCGCGCTTCGCTCCCGGAGCCGCGGAACTCGGCGGCCG
CCATGGCGTCCAACATGGACCGGGAGATGATCCTGGCGGATTTTCAGGCATGTACTGGCATTGAAAACATTGACGAAGCTATTACATTGC
TTGAACAAAATAATTGGGACTTAGTGGCAGCTATCAATGGTGTAATACCACAGGAAAATGGCATTCTACAAAGTGAATATGGAGGTGAGA
CCATACCAGGACCTGCATTTAATCCAGCAAGTCATCCAGCTTCAGCTCCTACTTCCTCTTCTTCTTCAGCGTTTCGACCTGTAATGCCAT
CCAGGCAGATTGTAGAAAGGCAACCTCGGATGCTGGACTTCAGGGTTGAATACAGAGACAGAAATGTTGATGTGGTACTTGAAGACACCT
GTACTGTTGGAGAGATTAAACAGATTCTAGAAAATGAACTTCAGATACCTGTGTCCAAAATGCTGTTAAAAGGCTGGAAGACGGGAGATG
TGGAAGACAGTACGGTCCTAAAATCTCTACACTTGCCAAAAAACAACAGTCTTTATGTCCTTACACCAGATTTGCCACCACCTTCATCAT
CTAGTCATGCTGGTGCCCTGCAGGAGTCATTAAATCAAAACTTCATGCTGATCATCACCCACCGAGAAGTCCAGCGGGAGTACAACCTGA
ACTTCTCAGGAAGCAGTACTATTCAAGAGGTAAAGAGAAATGTGTATGACCTTACAAGTATCCCCGTTCGCCACCAATTATGGGAGGGCT
GGCCAACTTCTGCTACAGACGACTCAGCCACCTACATTTACATGAAGGCCGCCTACCTCAGCATGTTTGGGAAGGAGGACCACAAGCCGT
TCGGGGACGACGAAGTGGAATTATTTCGAGCTGTGCCAGGCCTGAAGCTCAAGATTGCTGGGAAATCTCTACCCACAGAGAAGTTTGCCA
TCCGGAAGTCCCGGCGCTACTTCTCCTCCAACCCTATCTCGCTGCCAGTGCCTGCTCTGGAAATGATGTACATCTGGAACGGCTACGCCG
TGATTGGGAAGCAGCCGAAACTCACGGATGGGATACTTGAGATTATCACTAAGGCTGAAGAGATGCTGGAGAAAGGCCCAGAGAACGAGT
ACTCAGTGGATGACGAGTGCTTGGTGAAATTGTTGAAAGGCCTGTGTCTGAAATACCTGGGCCGTGTCCAGGAGGCCGAGGAGAATTTTA
GGAGCATCTCTGCCAATGAAAAGAAGATTAAATATGACCACTACTTGATCCCAAACGCCCTGCTGGAGCTGGCCCTGCTGCTTATGGAGC
AAGACAGAAACGAAGAGGCCATCAAACTTTTGGAATCTGCCAAGCAAAACTACAAGAATTACTCCATGGAGTCAAGGACACACTTTCGAA
TCCAGGCAGCCACACTCCAAGCCAAGTCTTCCCTAGAGAACAGCAGCAGATCCATGGTCTCATCAGTGTCCTTGTAGCTTTGTGCAGCAG
TTCCGGGCTGGAAGACAGAGACAGCTGGACAGAGCTCCTGAAAACATTTCAAAATACCCCCTCCCCCTGCCCTGCCCTGCCTTTGGGGTC

>In-frame_ENST00000396153_ENST00000371750_TCGA-ZG-A9KY-01A_FAF1_chr1_51121114_-_TTC39A_chr1_51761842_length(amino acids)=578AA_start in transcript=140_stop in transcript=1876
MPSSWPATVRPDPHPDQSSCPGCCDAGSAGCRRAAGAPEGYRVHERLALPALPRPLARRPARRLARQPLGARRRRRRWRRRSQEVPSASQ
VRASLPEPRNSAAAMASNMDREMILADFQACTGIENIDEAITLLEQNNWDLVAAINGVIPQENGILQSEYGGETIPGPAFNPASHPASAP
TSSSSSAFRPVMPSRQIVERQPRMLDFRVEYRDRNVDVVLEDTCTVGEIKQILENELQIPVSKMLLKGWKTGDVEDSTVLKSLHLPKNNS
LYVLTPDLPPPSSSSHAGALQESLNQNFMLIITHREVQREYNLNFSGSSTIQEVKRNVYDLTSIPVRHQLWEGWPTSATDDSATYIYMKA
AYLSMFGKEDHKPFGDDEVELFRAVPGLKLKIAGKSLPTEKFAIRKSRRYFSSNPISLPVPALEMMYIWNGYAVIGKQPKLTDGILEIIT
KAEEMLEKGPENEYSVDDECLVKLLKGLCLKYLGRVQEAEENFRSISANEKKIKYDHYLIPNALLELALLLMEQDRNEEAIKLLESAKQN

--------------------------------------------------------------
>In-frame_ENST00000396153_ENST00000371747_TCGA-ZG-A9KY-01A_FAF1_chr1_51121114_-_TTC39A_chr1_51761842_length(transcript)=1829nt_BP=1196nt
AGGGGCGGAGGCGGCGGCCAGGGAGGAAGCGGAGGAGGCGGAGGCGGCCGCGGCGTTCGCCCGCCCGCTCGCTCGCTCGGTTTCCCCGCC
CCCGCCGGGCTTAACGCCGCTGAAGGTATCCGGGTGCGCGCTGTCGCAACCTGCCCTCATCCTGGCCCGCGACTGTAAGACCGGACCCAC
ATCCAGACCAATCTTCCTGTCCGGGCTGCTGCGACGCGGGCTCCGCAGGTTGCAGGCGGGCGGCCGGGGCGCCTGAAGGTTACCGAGTGC
ATGAGCGCCTAGCGCTTCCCGCGCTGCCCCGCCCGCTGGCCCGCCGACCCGCCCGCCGGCTCGCCCGCCAGCCCCTCGGCGCCCGGCGGC
GGCGGCGGCGGTGGCGGCGACGGTCGCAGGAGGTGCCGTCTGCCTCCCAGGTGCGCGCTTCGCTCCCGGAGCCGCGGAACTCGGCGGCCG
CCATGGCGTCCAACATGGACCGGGAGATGATCCTGGCGGATTTTCAGGCATGTACTGGCATTGAAAACATTGACGAAGCTATTACATTGC
TTGAACAAAATAATTGGGACTTAGTGGCAGCTATCAATGGTGTAATACCACAGGAAAATGGCATTCTACAAAGTGAATATGGAGGTGAGA
CCATACCAGGACCTGCATTTAATCCAGCAAGTCATCCAGCTTCAGCTCCTACTTCCTCTTCTTCTTCAGCGTTTCGACCTGTAATGCCAT
CCAGGCAGATTGTAGAAAGGCAACCTCGGATGCTGGACTTCAGGGTTGAATACAGAGACAGAAATGTTGATGTGGTACTTGAAGACACCT
GTACTGTTGGAGAGATTAAACAGATTCTAGAAAATGAACTTCAGATACCTGTGTCCAAAATGCTGTTAAAAGGCTGGAAGACGGGAGATG
TGGAAGACAGTACGGTCCTAAAATCTCTACACTTGCCAAAAAACAACAGTCTTTATGTCCTTACACCAGATTTGCCACCACCTTCATCAT
CTAGTCATGCTGGTGCCCTGCAGGAGTCATTAAATCAAAACTTCATGCTGATCATCACCCACCGAGAAGTCCAGCGGGAGTACAACCTGA
ACTTCTCAGGAAGCAGTACTATTCAAGAGGTAAAGAGAAATGTGTATGACCTTACAAGTATCCCCGTTCGCCACCAATTATGGGAGGGCT
GGCCAACTTCTGCTACAGACGACTCAGCCACCTACATTTACATGAAGGCCGCCTACCTCAGCATGTTTGGGAAGGAGGACCACAAGCCGT
TCGGGGACGACGAAGTGGAATTATTTCGGTGGGTCCCACATCGTGCTCCCACTGTGTAGGCCACTCCCACCGTGTAGGCCGCTATGGACA
GACCAGCCAGGCCACCCTGAGCTGTGGGCACTGGGGAGGGAGGAGTAGGGTGGCTCCCTGCCCCCACCCGCGGACTGCCCCCCCTGCGTG
TCCTCCCCTCCCATCACCACCCCATGCTGCTGCTGCTGGTGGTTGGAGCCCTTTGACTTTCTTCAGAGGCTTTCTTTCACAGAAATGGTT
TTGCTAATATCGTCTTCCTCCGAGTCTCTTTCATGTGGACAGTAGGACAGATGTGGCTCCAAGGTCCAGGGAGGGAAGGTCTTTCACTCT
GCTGAGTTAACCTGAGACACTCAGAGAAGCACAGTAGAGAGCTGACAGTCGGAATCGAACAAACAAGAGTAAACCCAGCCTCTGCTTGTT
CTTAGCTGTGTCACCTTGGACAACTTCAGCATCTGTAAAATGGGAACAACAACCTCCACCTCGCAGCACTGTTTTGCAAATCAACTAGAT

>In-frame_ENST00000396153_ENST00000371747_TCGA-ZG-A9KY-01A_FAF1_chr1_51121114_-_TTC39A_chr1_51761842_length(amino acids)=392AA_start in transcript=140_stop in transcript=1318
MPSSWPATVRPDPHPDQSSCPGCCDAGSAGCRRAAGAPEGYRVHERLALPALPRPLARRPARRLARQPLGARRRRRRWRRRSQEVPSASQ
VRASLPEPRNSAAAMASNMDREMILADFQACTGIENIDEAITLLEQNNWDLVAAINGVIPQENGILQSEYGGETIPGPAFNPASHPASAP
TSSSSSAFRPVMPSRQIVERQPRMLDFRVEYRDRNVDVVLEDTCTVGEIKQILENELQIPVSKMLLKGWKTGDVEDSTVLKSLHLPKNNS
LYVLTPDLPPPSSSSHAGALQESLNQNFMLIITHREVQREYNLNFSGSSTIQEVKRNVYDLTSIPVRHQLWEGWPTSATDDSATYIYMKA

--------------------------------------------------------------

Top

Fusion Gene PPI Analysis for FAF1-TTC39A


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


Top

Related Drugs for FAF1-TTC39A


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

Related Diseases for FAF1-TTC39A


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
TgeneTTC39AC0023903Liver neoplasms1CTD_human
TgeneTTC39AC0345904Malignant neoplasm of liver1CTD_human