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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:FAU-SRRM1 (FusionGDB2 ID:29416) |
Fusion Gene Summary for FAU-SRRM1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: FAU-SRRM1 | Fusion gene ID: 29416 | Hgene | Tgene | Gene symbol | FAU | SRRM1 | Gene ID | 2197 | 10250 |
Gene name | FAU ubiquitin like and ribosomal protein S30 fusion | serine and arginine repetitive matrix 1 | |
Synonyms | FAU1|Fub1|Fubi|MNSFbeta|RPS30|S30|asr1 | 160-KD|POP101|SRM160 | |
Cytomap | 11q13.1 | 1p36.11 | |
Type of gene | protein-coding | protein-coding | |
Description | ubiquitin-like protein fubi and ribosomal protein S3040S ribosomal protein S30FAU-encoded ubiquitin-like proteinFBR-MuSV-associated ubiquitously expressedFinkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)monoclo | serine/arginine repetitive matrix protein 1SR-related nuclear matrix protein of 160 kDaSer/Arg-related nuclear matrix protein | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000529639, ENST00000531743, ENST00000525297, ENST00000527548, ENST00000279259, ENST00000529259, ENST00000434372, | ENST00000323848, ENST00000447431, ENST00000374389, ENST00000479034, ENST00000537199, | |
Fusion gene scores | * DoF score | 14 X 12 X 2=336 | 7 X 11 X 4=308 |
# samples | 15 | 11 | |
** MAII score | log2(15/336*10)=-1.16349873228288 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(11/308*10)=-1.48542682717024 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: FAU [Title/Abstract] AND SRRM1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | FAU(64888194)-SRRM1(24974082), # samples:2 FAU(64888452)-SRRM1(24975349), # samples:2 SRRM1(24974293)-FAU(64888246), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. | FAU-SRRM1 seems lost the major protein functional domain in Hgene partner, which is a cell metabolism gene due to the frame-shifted ORF. FAU-SRRM1 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. FAU-SRRM1 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene breakpoints across FAU (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across SRRM1 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | PRAD | TCGA-KK-A6E1-01A | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
ChimerDB4 | PRAD | TCGA-KK-A6E1 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
ChimerDB4 | PRAD | TCGA-KK-A6E1 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
ChimerDB4 | PRAD | TCGA-KK-A6E1 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
ChimerDB4 | PRAD | TCGA-KK-A6E1 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
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Fusion Gene ORF analysis for FAU-SRRM1 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-intron | ENST00000529639 | ENST00000323848 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000529639 | ENST00000447431 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000529639 | ENST00000374389 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000529639 | ENST00000479034 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000529639 | ENST00000537199 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000531743 | ENST00000323848 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000531743 | ENST00000447431 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000531743 | ENST00000374389 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000531743 | ENST00000479034 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000531743 | ENST00000537199 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000525297 | ENST00000323848 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000525297 | ENST00000447431 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000525297 | ENST00000374389 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000525297 | ENST00000479034 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000525297 | ENST00000537199 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000527548 | ENST00000323848 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000527548 | ENST00000447431 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000527548 | ENST00000374389 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000527548 | ENST00000479034 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000527548 | ENST00000537199 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000279259 | ENST00000323848 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000279259 | ENST00000447431 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000279259 | ENST00000374389 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000279259 | ENST00000479034 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000279259 | ENST00000537199 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000529259 | ENST00000323848 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000529259 | ENST00000447431 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000529259 | ENST00000374389 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000529259 | ENST00000479034 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000529259 | ENST00000537199 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000434372 | ENST00000323848 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000434372 | ENST00000447431 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000434372 | ENST00000374389 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000434372 | ENST00000479034 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
intron-intron | ENST00000434372 | ENST00000537199 | FAU | chr11 | 64888194 | - | SRRM1 | chr1 | 24974082 | + |
Frame-shift | ENST00000529639 | ENST00000323848 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
Frame-shift | ENST00000529639 | ENST00000447431 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
Frame-shift | ENST00000529639 | ENST00000374389 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
5CDS-3UTR | ENST00000529639 | ENST00000479034 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
5CDS-intron | ENST00000529639 | ENST00000537199 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
In-frame | ENST00000531743 | ENST00000323848 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
In-frame | ENST00000531743 | ENST00000447431 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
In-frame | ENST00000531743 | ENST00000374389 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
5CDS-3UTR | ENST00000531743 | ENST00000479034 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
5CDS-intron | ENST00000531743 | ENST00000537199 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
In-frame | ENST00000525297 | ENST00000323848 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
In-frame | ENST00000525297 | ENST00000447431 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
In-frame | ENST00000525297 | ENST00000374389 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
5CDS-3UTR | ENST00000525297 | ENST00000479034 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
5CDS-intron | ENST00000525297 | ENST00000537199 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
Frame-shift | ENST00000527548 | ENST00000323848 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
Frame-shift | ENST00000527548 | ENST00000447431 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
Frame-shift | ENST00000527548 | ENST00000374389 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
5CDS-3UTR | ENST00000527548 | ENST00000479034 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
5CDS-intron | ENST00000527548 | ENST00000537199 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
intron-3CDS | ENST00000279259 | ENST00000323848 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
intron-3CDS | ENST00000279259 | ENST00000447431 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
intron-3CDS | ENST00000279259 | ENST00000374389 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
intron-3UTR | ENST00000279259 | ENST00000479034 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
intron-intron | ENST00000279259 | ENST00000537199 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
intron-3CDS | ENST00000529259 | ENST00000323848 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
intron-3CDS | ENST00000529259 | ENST00000447431 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
intron-3CDS | ENST00000529259 | ENST00000374389 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
intron-3UTR | ENST00000529259 | ENST00000479034 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
intron-intron | ENST00000529259 | ENST00000537199 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
intron-3CDS | ENST00000434372 | ENST00000323848 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
intron-3CDS | ENST00000434372 | ENST00000447431 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
intron-3CDS | ENST00000434372 | ENST00000374389 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
intron-3UTR | ENST00000434372 | ENST00000479034 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
intron-intron | ENST00000434372 | ENST00000537199 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + |
Frame-shift | ENST00000529639 | ENST00000323848 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
Frame-shift | ENST00000529639 | ENST00000447431 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
Frame-shift | ENST00000529639 | ENST00000374389 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
5CDS-3UTR | ENST00000529639 | ENST00000479034 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
5CDS-intron | ENST00000529639 | ENST00000537199 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
In-frame | ENST00000531743 | ENST00000323848 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
In-frame | ENST00000531743 | ENST00000447431 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
In-frame | ENST00000531743 | ENST00000374389 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
5CDS-3UTR | ENST00000531743 | ENST00000479034 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
5CDS-intron | ENST00000531743 | ENST00000537199 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
In-frame | ENST00000525297 | ENST00000323848 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
In-frame | ENST00000525297 | ENST00000447431 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
In-frame | ENST00000525297 | ENST00000374389 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
5CDS-3UTR | ENST00000525297 | ENST00000479034 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
5CDS-intron | ENST00000525297 | ENST00000537199 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
Frame-shift | ENST00000527548 | ENST00000323848 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
Frame-shift | ENST00000527548 | ENST00000447431 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
Frame-shift | ENST00000527548 | ENST00000374389 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
5CDS-3UTR | ENST00000527548 | ENST00000479034 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
5CDS-intron | ENST00000527548 | ENST00000537199 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
intron-3CDS | ENST00000279259 | ENST00000323848 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
intron-3CDS | ENST00000279259 | ENST00000447431 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
intron-3CDS | ENST00000279259 | ENST00000374389 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
intron-3UTR | ENST00000279259 | ENST00000479034 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
intron-intron | ENST00000279259 | ENST00000537199 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
intron-3CDS | ENST00000529259 | ENST00000323848 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
intron-3CDS | ENST00000529259 | ENST00000447431 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
intron-3CDS | ENST00000529259 | ENST00000374389 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
intron-3UTR | ENST00000529259 | ENST00000479034 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
intron-intron | ENST00000529259 | ENST00000537199 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
intron-3CDS | ENST00000434372 | ENST00000323848 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
intron-3CDS | ENST00000434372 | ENST00000447431 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
intron-3CDS | ENST00000434372 | ENST00000374389 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
intron-3UTR | ENST00000434372 | ENST00000479034 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
intron-intron | ENST00000434372 | ENST00000537199 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000531743 | FAU | chr11 | 64888452 | - | ENST00000323848 | SRRM1 | chr1 | 24975349 | + | 3982 | 520 | 154 | 3000 | 948 |
ENST00000531743 | FAU | chr11 | 64888452 | - | ENST00000447431 | SRRM1 | chr1 | 24975349 | + | 3418 | 520 | 154 | 3036 | 960 |
ENST00000531743 | FAU | chr11 | 64888452 | - | ENST00000374389 | SRRM1 | chr1 | 24975349 | + | 3368 | 520 | 154 | 3027 | 957 |
ENST00000525297 | FAU | chr11 | 64888452 | - | ENST00000323848 | SRRM1 | chr1 | 24975349 | + | 3641 | 179 | 8 | 2659 | 883 |
ENST00000525297 | FAU | chr11 | 64888452 | - | ENST00000447431 | SRRM1 | chr1 | 24975349 | + | 3077 | 179 | 8 | 2695 | 895 |
ENST00000525297 | FAU | chr11 | 64888452 | - | ENST00000374389 | SRRM1 | chr1 | 24975349 | + | 3027 | 179 | 8 | 2686 | 892 |
ENST00000531743 | FAU | chr11 | 64888453 | - | ENST00000323848 | SRRM1 | chr1 | 24975350 | + | 3982 | 520 | 154 | 3000 | 948 |
ENST00000531743 | FAU | chr11 | 64888453 | - | ENST00000447431 | SRRM1 | chr1 | 24975350 | + | 3418 | 520 | 154 | 3036 | 960 |
ENST00000531743 | FAU | chr11 | 64888453 | - | ENST00000374389 | SRRM1 | chr1 | 24975350 | + | 3368 | 520 | 154 | 3027 | 957 |
ENST00000525297 | FAU | chr11 | 64888453 | - | ENST00000323848 | SRRM1 | chr1 | 24975350 | + | 3641 | 179 | 8 | 2659 | 883 |
ENST00000525297 | FAU | chr11 | 64888453 | - | ENST00000447431 | SRRM1 | chr1 | 24975350 | + | 3077 | 179 | 8 | 2695 | 895 |
ENST00000525297 | FAU | chr11 | 64888453 | - | ENST00000374389 | SRRM1 | chr1 | 24975350 | + | 3027 | 179 | 8 | 2686 | 892 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000531743 | ENST00000323848 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + | 0.003973449 | 0.9960265 |
ENST00000531743 | ENST00000447431 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + | 0.006665385 | 0.99333465 |
ENST00000531743 | ENST00000374389 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + | 0.007326159 | 0.9926738 |
ENST00000525297 | ENST00000323848 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + | 0.004850358 | 0.9951497 |
ENST00000525297 | ENST00000447431 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + | 0.008859003 | 0.99114096 |
ENST00000525297 | ENST00000374389 | FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + | 0.009324136 | 0.9906758 |
ENST00000531743 | ENST00000323848 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + | 0.003973449 | 0.9960265 |
ENST00000531743 | ENST00000447431 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + | 0.006665385 | 0.99333465 |
ENST00000531743 | ENST00000374389 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + | 0.007326159 | 0.9926738 |
ENST00000525297 | ENST00000323848 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + | 0.004850358 | 0.9951497 |
ENST00000525297 | ENST00000447431 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + | 0.008859003 | 0.99114096 |
ENST00000525297 | ENST00000374389 | FAU | chr11 | 64888453 | - | SRRM1 | chr1 | 24975350 | + | 0.009324136 | 0.9906758 |
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Fusion Genomic Features for FAU-SRRM1 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + | 0.000811956 | 0.999188 |
FAU | chr11 | 64888452 | - | SRRM1 | chr1 | 24975349 | + | 0.000811956 | 0.999188 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for FAU-SRRM1 |
Go to FGviewer for the breakpoints of chr11:64888452-chr1:24975349 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
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FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | SRRM1 | chr11:64888452 | chr1:24975349 | ENST00000323848 | 2 | 17 | 163_726 | 78.0 | 905.0 | Compositional bias | Note=Arg-rich | |
Tgene | SRRM1 | chr11:64888452 | chr1:24975349 | ENST00000323848 | 2 | 17 | 210_417 | 78.0 | 905.0 | Compositional bias | Note=Pro-rich | |
Tgene | SRRM1 | chr11:64888452 | chr1:24975349 | ENST00000323848 | 2 | 17 | 278_756 | 78.0 | 905.0 | Compositional bias | Note=Ser-rich | |
Tgene | SRRM1 | chr11:64888452 | chr1:24975349 | ENST00000323848 | 2 | 17 | 550_799 | 78.0 | 905.0 | Compositional bias | Note=Pro-rich | |
Tgene | SRRM1 | chr11:64888452 | chr1:24975349 | ENST00000323848 | 2 | 17 | 809_835 | 78.0 | 905.0 | Compositional bias | Note=Lys-rich | |
Tgene | SRRM1 | chr11:64888452 | chr1:24975349 | ENST00000323848 | 2 | 17 | 836_865 | 78.0 | 905.0 | Compositional bias | Note=Ala-rich | |
Tgene | SRRM1 | chr11:64888453 | chr1:24975350 | ENST00000323848 | 2 | 17 | 163_726 | 78.0 | 905.0 | Compositional bias | Note=Arg-rich | |
Tgene | SRRM1 | chr11:64888453 | chr1:24975350 | ENST00000323848 | 2 | 17 | 210_417 | 78.0 | 905.0 | Compositional bias | Note=Pro-rich | |
Tgene | SRRM1 | chr11:64888453 | chr1:24975350 | ENST00000323848 | 2 | 17 | 278_756 | 78.0 | 905.0 | Compositional bias | Note=Ser-rich | |
Tgene | SRRM1 | chr11:64888453 | chr1:24975350 | ENST00000323848 | 2 | 17 | 550_799 | 78.0 | 905.0 | Compositional bias | Note=Pro-rich | |
Tgene | SRRM1 | chr11:64888453 | chr1:24975350 | ENST00000323848 | 2 | 17 | 809_835 | 78.0 | 905.0 | Compositional bias | Note=Lys-rich | |
Tgene | SRRM1 | chr11:64888453 | chr1:24975350 | ENST00000323848 | 2 | 17 | 836_865 | 78.0 | 905.0 | Compositional bias | Note=Ala-rich | |
Tgene | SRRM1 | chr11:64888452 | chr1:24975349 | ENST00000323848 | 2 | 17 | 300_688 | 78.0 | 905.0 | Region | Note=Necessary for speckles and matrix localization | |
Tgene | SRRM1 | chr11:64888453 | chr1:24975350 | ENST00000323848 | 2 | 17 | 300_688 | 78.0 | 905.0 | Region | Note=Necessary for speckles and matrix localization |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | SRRM1 | chr11:64888452 | chr1:24975349 | ENST00000323848 | 2 | 17 | 27_126 | 78.0 | 905.0 | Domain | PWI | |
Tgene | SRRM1 | chr11:64888453 | chr1:24975350 | ENST00000323848 | 2 | 17 | 27_126 | 78.0 | 905.0 | Domain | PWI | |
Tgene | SRRM1 | chr11:64888452 | chr1:24975349 | ENST00000323848 | 2 | 17 | 1_151 | 78.0 | 905.0 | Region | Note=Necessary for DNA and RNA-binding | |
Tgene | SRRM1 | chr11:64888452 | chr1:24975349 | ENST00000323848 | 2 | 17 | 1_156 | 78.0 | 905.0 | Region | Note=Necessary for mRNA 3'-end cleavage and cytoplasmic accumulation | |
Tgene | SRRM1 | chr11:64888453 | chr1:24975350 | ENST00000323848 | 2 | 17 | 1_151 | 78.0 | 905.0 | Region | Note=Necessary for DNA and RNA-binding | |
Tgene | SRRM1 | chr11:64888453 | chr1:24975350 | ENST00000323848 | 2 | 17 | 1_156 | 78.0 | 905.0 | Region | Note=Necessary for mRNA 3'-end cleavage and cytoplasmic accumulation |
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Fusion Gene Sequence for FAU-SRRM1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000531743_ENST00000323848_TCGA-KK-A6E1_FAU_chr11_64888452_-_SRRM1_chr1_24975349_length(transcript)=3982nt_BP=520nt CTTGTAGCAGGTTGGCTGCGGGGTCAGAAGGCGCGGGGGGAACCGAAGAACGGGGCCTGCTCCGTGGCCCTGCTCCAGTCCCTATCCGAA CTCCTTGGGAGGCCTGGCCTTCCCCACGTGAGCCGCCGCGACCACCATCCCGTCGCGATCGTTTCTGGACCGCTTTCCACTCCCAAATCT CCTTTATCCCAGAGCATTTCTTGGCTTCTCTTACAAGCCGTCTTTTCTTTACTCAGTCGCCAATATGCAGCTCTTTGTCCGCGCCCAGGA GCTACACACCTTCGAGGTGACCGGCCAGGAAACGGTCGCCCAGATCAAGGCTCATGTAGCCTCACTGGAGGGCATTGCCCCGGAAGATCA AGTCGTGCTCCTGGCAGGCGCGCCCCTGGAGGATGAGGCCACTCTGGGCCAGTGCGGGGTGGAGGCCCTGACTACCCTGGAAGTAGCAGG CCGCATGCTTGGAGGTAAAGTCCATGGTTCCCTGGCCCGTGCTGGAAAAGTGAGAGGTCAGACTCCTAAGAATCCAGACTCCAAAATGAT GCAAATCAACCTGACTGGATTTTTGAATGGAAAAAATGCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAGTGCACAAGAAAA CATCGCGGGAATCCCTTCTGCTTTCCTAGAACTGAAGAAAGAAGAAATAAAACAAAGACAGATTGAACAAGAAAAACTGGCATCTATGAA AAAGCAAGATGAAGACAAAGATAAAAGAGATAAGGAAGAAAAAGAAAGCAGCAGAGAAAAAAGGGAGCGGTCTCGTAGCCCAAGAAGACG CAAATCCAGATCTCCTTCCCCTAGAAGACGATCTTCCCCTGTCAGGAGAGAGAGAAAGCGCAGTCATTCTCGATCTCCCCGTCACAGAAC CAAGAGCCGGAGTCCTTCCCCTGCTCCAGAAAAGAAGGAAAAAACTCCAGAGCTCCCAGAACCTTCAGTGAAAGTAAAAGAACCTTCAGT ACAAGAGGCTACTTCTACTAGTGACATTCTGAAAGTTCCCAAACCTGAACCTATACCAGAGCCTAAAGAACCTTCTCCGGAAAAAAATTC CAAAAAAGAAAAGGAGAAGGAGAAGACCCGACCACGATCTCGGTCACGCTCCAAATCAAGATCCCGGACGCGGTCCCGCTCTCCTTCTCA CACTCGACCTAGACGGCGCCATAGATCCCGATCAAGATCGTATTCACCTAGAAGGCGGCCAAGCCCAAGAAGGCGGCCATCTCCTCGAAG AAGAACTCCGCCAAGAAGAATGCCTCCTCCACCAAGGCATAGAAGGAGTAGATCTCCAGTAAGACGAAGAAGACGTTCGTCAGCATCCTT GTCTGGGAGTAGCTCATCATCCTCTTCATCTCGTTCACGGTCACCACCAAAGAAGCCTCCCAAGAGGACATCCAGCCCCCCTCGGAAAAC TCGTAGGTTATCTCCTTCAGCAAGTCCTCCAAGGCGAAGGCACAGGCCATCACCTCCTGCAACTCCACCACCCAAAACTCGGCATTCCCC TACACCCCAGCAGTCAAACCGTACAAGAAAAAGTCGTGTTTCTGTGTCTCCAGGGAGAACTTCAGGTAAAGTGACAAAACATAAAGGTAC TGAGAAAAGAGAATCCCCTTCACCAGCACCGAAGCCTAGAAAAGTAGAGTTATCTGAATCGGAAGAAGATAAAGGTGGCAAAATGGCTGC AGCAGATTCTGTGCAGCAGAGACGCCAATACAGACGACAAAACCAGCAGTCTTCATCTGACTCTGGCTCCTCCTCCTCCTCAGAAGATGA ACGACCCAAGAGATCCCATGTGAAGAATGGTGAGGTTGGCAGGCGGCGGAGACATTCCCCTTCCCGGAGTGCTTCTCCATCACCACGAAA GCGCCAAAAAGAGACTTCCCCTCGTGGTAGACGGAGGAGAAGTCCATCCCCACCACCCACCAGAAGGCGACGGTCTCCTTCTCCCGCCCC TCCTCCTCGACGGCGCAGGACTCCCACACCACCACCACGACGAAGGACTCCTTCTCCTCCCCCACGTCGGCGCTCACCTTCTCCTAGAAG ATACTCTCCTCCAATACAGAGGAGATACTCTCCTTCTCCACCTCCAAAGAGAAGAACGGCTTCACCTCCTCCCCCTCCTAAACGAAGAGC ATCACCATCTCCACCACCAAAGCGGCGGGTCTCCCATTCTCCACCTCCCAAACAAAGAAGCTCCCCAGTCACCAAGAGACGTTCACCTTC ATTATCATCCAAGCATAGGAAAGGGTCTTCCCCAAGCCGCTCTACCCGGGAGGCCCGATCACCACAACCAAACAAACGGCATTCGCCCTC ACCACGGCCTCGAGCTCCTCAGACCTCCTCAAGTCCTCCACCCGTTCGAAGAGGAGCGTCGTCATCACCCCAAAGAAGGCAGTCCCCGTC TCCAAGTACTAGGCCCATTAGGAGAGTCTCCAGGACTCCGGAACCTAAAAAGATAAAAAAGGCTGCTTCCCCAAGCCCACAGTCTGTAAG AAGGGTCTCATCCTCCCGATCTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCCGTCCAGTCTCAGTC ACCGTCTACAAACTGGTCACCAGCTGTACCGGTCAAAAAGGCCAAAAGCCCAACACCGAGCCCATCACCGCCAAGAAATTCAGATCAGGA AGGAGGTGGAAAGAAAAAGAAGAAAAAGAAGGACAAGAAACACAAAAAGGATAAGAAGCACAAGAAGCACAAAAAACACAAGAAGGAAAA GGCTGTGGCTGCAGCTGCTGCAGCTGCTGTGACCCCTGCAGCCATTGCAGCTGCCACAACCACATTAGCACAGGAAGAGCCAGTGGCAGC GCCAGAGCCGAAGAAGGAGACTGAAAGTGAAGCTGAAGATAACCTTGATGATTTAGAAAAGCACCTGCGTGAAAAGGCCCTGAGATCAAT GAGGAAGGCCCAAGTGTCCCCACAGTCTTAGGGGGAAATGTTTGTTATGATGTAAATTTTATTTGGTTTGTACGCAGTTCAATTTCAAAA TTGCTAAAATGTGTTTGAGCTTTAGACTATAACATTTGTTGTAATAATTGCTAGGTTGAAGTTCAACATGTAAAAAAAGGGGGCATGGAT TTACATTGCAAAAGGTGTCCACAGTGTATTAGTGACATTCTTTCATTGACAGCTGACATAATTCATTGAGTGAAATATTTTAAGCCAAAA AAAAATTCCCTTTTTAAAAAAGGGGGTTTAAATACTGTTGGCATTTTTATGGTTCCTTTAAATGCCCTAGCTATTCCCAGAGGGGTTTTT TTGTTTGTTTTTTTGGTTTTGATTTTCTTTTTGTTTTTCTTTCTTCTTCTTATTTTTTTCATTTGAGTCTTAGCTCCCATTTAAGTTATG CTTCTGACCTTGTATGGTCTGTAAGCTTGCCCAGAAATAAGACCACTGTTTTGAACTACCACAAAAGTATAAATGAATATTTTAATGCCA CAATCTTTCCTGTTGCCTGTGGAGTCTCTGCTGAAATGAATCAGGATTCGAGCTCTAGGATGAGACAGAAAATGAAAGCATGTTGTTTGC CAGGACACTGTGGGTTTATATTGATGTGTAACAAGTTGATTTGGAACACTGGACTCTCATTCTGTTATTCTGGTTTTGTTTTTTTTGTTT TGTTTTTTTTCTTTTGTAAAGGCAATGAGCTAGTCCCAGAAAGGATCCTTCAGTTACATACAATTTGTTTAATGAAATGTCATGGCTCTG TTCATATTTTTGTCTTGTTCTTCCAATTGGTATATACAACTTTCAGAGCCTCTTGTATTTGGAAGGCTGGAAGGGCCCAGACTTTGGAAT AGTGTCTTGGTTTCACTGTTTTTGTTTTGATTTTTTTTTTGTTTTGATTTTTTTTAAACTAAAGCTATATAAAGCTTGTGGATTAAACAG >In-frame_ENST00000531743_ENST00000323848_TCGA-KK-A6E1_FAU_chr11_64888452_-_SRRM1_chr1_24975349_length(amino acids)=948AA_start in transcript=154_stop in transcript=3000 MDRFPLPNLLYPRAFLGFSYKPSFLYSVANMQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPSAFLELKKEEIKQRQI EQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEP SVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPS PRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPAT PPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDS GSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPP RRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSP QPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPA PPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAVAAAAAAAVTPAAIAAATTT -------------------------------------------------------------- >In-frame_ENST00000531743_ENST00000447431_TCGA-KK-A6E1_FAU_chr11_64888452_-_SRRM1_chr1_24975349_length(transcript)=3418nt_BP=520nt CTTGTAGCAGGTTGGCTGCGGGGTCAGAAGGCGCGGGGGGAACCGAAGAACGGGGCCTGCTCCGTGGCCCTGCTCCAGTCCCTATCCGAA CTCCTTGGGAGGCCTGGCCTTCCCCACGTGAGCCGCCGCGACCACCATCCCGTCGCGATCGTTTCTGGACCGCTTTCCACTCCCAAATCT CCTTTATCCCAGAGCATTTCTTGGCTTCTCTTACAAGCCGTCTTTTCTTTACTCAGTCGCCAATATGCAGCTCTTTGTCCGCGCCCAGGA GCTACACACCTTCGAGGTGACCGGCCAGGAAACGGTCGCCCAGATCAAGGCTCATGTAGCCTCACTGGAGGGCATTGCCCCGGAAGATCA AGTCGTGCTCCTGGCAGGCGCGCCCCTGGAGGATGAGGCCACTCTGGGCCAGTGCGGGGTGGAGGCCCTGACTACCCTGGAAGTAGCAGG CCGCATGCTTGGAGGTAAAGTCCATGGTTCCCTGGCCCGTGCTGGAAAAGTGAGAGGTCAGACTCCTAAGAATCCAGACTCCAAAATGAT GCAAATCAACCTGACTGGATTTTTGAATGGAAAAAATGCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAGTGCACAAGAAAA CATCGCGGGAATCCCTTCTGCTTTCCTAGAACTGAAGAAAGAAGAAATAAAACAAAGACAGATTGAACAAGAAAAACTGGCATCTATGAA AAAGCAAGATGAAGACAAAGATAAAAGAGATAAGGAAGAAAAAGAAAGCAGCAGAGAAAAAAGGGAGCGGTCTCGTAGCCCAAGAAGACG CAAATCCAGATCTCCTTCCCCTAGAAGACGATCTTCCCCTGTCAGGAGAGAGAGAAAGCGCAGTCATTCTCGATCTCCCCGTCACAGAAC CAAGAGCCGGAGTCCTTCCCCTGCTCCAGAAAAGAAGGAAAAAACTCCAGAGCTCCCAGAACCTTCAGTGAAAGTAAAAGAACCTTCAGT ACAAGAGGCTACTTCTACTAGTGACATTCTGAAAGTTCCCAAACCTGAACCTATACCAGAGCCTAAAGAACCTTCTCCGGAAAAAAATTC CAAAAAAGAAAAGGAGAAGGAGAAGACCCGACCACGATCTCGGTCACGCTCCAAATCAAGATCCCGGACGCGGTCCCGCTCTCCTTCTCA CACTCGACCTAGACGGCGCCATAGATCCCGATCAAGATCGTATTCACCTAGAAGGCGGCCAAGCCCAAGAAGGCGGCCATCTCCTCGAAG AAGAACTCCGCCAAGAAGAATGCCTCCTCCACCAAGGCATAGAAGGAGTAGATCTCCAGTAAGACGAAGAAGACGTTCGTCAGCATCCTT GTCTGGGAGTAGCTCATCATCCTCTTCATCTCGTTCACGGTCACCACCAAAGAAGCCTCCCAAGAGGACATCCAGCCCCCCTCGGAAAAC TCGTAGGTTATCTCCTTCAGCAAGTCCTCCAAGGCGAAGGCACAGGCCATCACCTCCTGCAACTCCACCACCCAAAACTCGGCATTCCCC TACACCCCAGCAGTCAAACCGTACAAGAAAAAGTCGTGTTTCTGTGTCTCCAGGGAGAACTTCAGTGACAAAACATAAAGGTACTGAGAA AAGAGAATCCCCTTCACCAGCACCGAAGCCTAGAAAAGTAGAGTTATCTGAATCGGAAGAAGATAAAGGTGGCAAAATGGCTGCAGCAGA TTCTGTGCAGCAGAGACGCCAATACAGACGACAAAACCAGCAGTCTTCATCTGACTCTGGCTCCTCCTCCTCCTCAGAAGATGAACGACC CAAGAGATCCCATGTGAAGAATGGTGAGGTTGGCAGGCGGCGGAGACATTCCCCTTCCCGGAGTGCTTCTCCATCACCACGAAAGCGCCA AAAAGAGACTTCCCCTCGGATGCAGATGGGAAAGCGATGGCAATCGCCAGTGACTAAAAGTGGTAGACGGAGGAGAAGTCCATCCCCACC ACCCACCAGAAGGCGACGGTCTCCTTCTCCCGCCCCTCCTCCTCGACGGCGCAGGACTCCCACACCACCACCACGACGAAGGACTCCTTC TCCTCCCCCACGTCGGCGCTCACCTTCTCCTAGAAGATACTCTCCTCCAATACAGAGGAGATACTCTCCTTCTCCACCTCCAAAGAGAAG AACGGCTTCACCTCCTCCCCCTCCTAAACGAAGAGCATCACCATCTCCACCACCAAAGCGGCGGGTCTCCCATTCTCCACCTCCCAAACA AAGAAGCTCCCCAGTCACCAAGAGACGTTCACCTTCATTATCATCCAAGCATAGGAAAGGGTCTTCCCCAAGCCGCTCTACCCGGGAGGC CCGATCACCACAACCAAACAAACGGCATTCGCCCTCACCACGGCCTCGAGCTCCTCAGACCTCCTCAAGTCCTCCACCCGTTCGAAGAGG AGCGTCGTCATCACCCCAAAGAAGGCAGTCCCCGTCTCCAAGTACTAGGCCCATTAGGAGAGTCTCCAGGACTCCGGAACCTAAAAAGAT AAAAAAGGCTGCTTCCCCAAGCCCACAGTCTGTAAGAAGGGTCTCATCCTCCCGATCTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAAA GCCCCCAGCACCTCCATCCCCCGTCCAGTCTCAGTCACCGTCTACAAACTGGTCACCAGCTGTACCGGTCAAAAAGGCCAAAAGCCCAAC ACCGAGCCCATCACCGCCAAGAAATTCAGATCAGGAAGGAGGTGGAAAGAAAAAGAAGAAAAAGAAGGACAAGAAACACAAAAAGGATAA GAAGCACAAGAAGCACAAAAAACACAAGAAGGAAAAGGCTGTGGCTGCAGCTGCTGCAGCTGCTGTGACCCCTGCAGCCATTGCAGCTGC CACAACCACATTAGCACAGGAAGAGCCAGTGGCAGCGCCAGAGCCGAAGAAGGAGACTGAAAGTGAAGCTGAAGATAACCTTGATGATTT AGAAAAGCACCTGCGTGAAAAGGCCCTGAGATCAATGAGGAAGGCCCAAGTGTCCCCACAGTCTTAGGGGGAAATGTTTGTTATGATGTA AATTTTATTTGGTTTGTACGCAGTTCAATTTCAAAATTGCTAAAATGTGTTTGAGCTTTAGACTATAACATTTGTTGTAATAATTGCTAG GTTGAAGTTCAACATGTAAAAAAAGGGGGCATGGATTTACATTGCAAAAGGTGTCCACAGTGTATTAGTGACATTCTTTCATTGACAGCT GACATAATTCATTGAGTGAAATATTTTAAGCCAAAAAAAAATTCCCTTTTTAAAAAAGGGGGTTTAAATACTGTTGGCATTTTTATGGTT >In-frame_ENST00000531743_ENST00000447431_TCGA-KK-A6E1_FAU_chr11_64888452_-_SRRM1_chr1_24975349_length(amino acids)=960AA_start in transcript=154_stop in transcript=3036 MDRFPLPNLLYPRAFLGFSYKPSFLYSVANMQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPSAFLELKKEEIKQRQI EQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEP SVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPS PRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPAT PPPKTRHSPTPQQSNRTRKSRVSVSPGRTSVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGS SSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRMQMGKRWQSPVTKSGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPT PPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGS SPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVS GSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAVAAAAAAA -------------------------------------------------------------- >In-frame_ENST00000531743_ENST00000374389_TCGA-KK-A6E1_FAU_chr11_64888452_-_SRRM1_chr1_24975349_length(transcript)=3368nt_BP=520nt CTTGTAGCAGGTTGGCTGCGGGGTCAGAAGGCGCGGGGGGAACCGAAGAACGGGGCCTGCTCCGTGGCCCTGCTCCAGTCCCTATCCGAA CTCCTTGGGAGGCCTGGCCTTCCCCACGTGAGCCGCCGCGACCACCATCCCGTCGCGATCGTTTCTGGACCGCTTTCCACTCCCAAATCT CCTTTATCCCAGAGCATTTCTTGGCTTCTCTTACAAGCCGTCTTTTCTTTACTCAGTCGCCAATATGCAGCTCTTTGTCCGCGCCCAGGA GCTACACACCTTCGAGGTGACCGGCCAGGAAACGGTCGCCCAGATCAAGGCTCATGTAGCCTCACTGGAGGGCATTGCCCCGGAAGATCA AGTCGTGCTCCTGGCAGGCGCGCCCCTGGAGGATGAGGCCACTCTGGGCCAGTGCGGGGTGGAGGCCCTGACTACCCTGGAAGTAGCAGG CCGCATGCTTGGAGGTAAAGTCCATGGTTCCCTGGCCCGTGCTGGAAAAGTGAGAGGTCAGACTCCTAAGAATCCAGACTCCAAAATGAT GCAAATCAACCTGACTGGATTTTTGAATGGAAAAAATGCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAGTGCACAAGAAAA CATCGCGGGAATCCCTTCTGCTTTCCTAGAACTGAAGAAAGAAGAAATAAAACAAAGACAGATTGAACAAGAAAAACTGGCATCTATGAA AAAGCAAGATGAAGACAAAGATAAAAGAGATAAGGAAGAAAAAGAAAGCAGCAGAGAAAAAAGGGAGCGGTCTCGTAGCCCAAGAAGACG CAAATCCAGATCTCCTTCCCCTAGAAGACGATCTTCCCCTGTCAGGAGAGAGAGAAAGCGCAGTCATTCTCGATCTCCCCGTCACAGAAC CAAGAGCCGGAGTCCTTCCCCTGCTCCAGAAAAGAAGGAAAAAACTCCAGAGCTCCCAGAACCTTCAGTGAAAGTAAAAGAACCTTCAGT ACAAGAGGCTACTTCTACTAGTGACATTCTGAAAGTTCCCAAACCTGAACCTATACCAGAGCCTAAAGAACCTTCTCCGGAAAAAAATTC CAAAAAAGAAAAGGAGAAGGAGAAGACCCGACCACGATCTCGGTCACGCTCCAAATCAAGATCCCGGACGCGGTCCCGCTCTCCTTCTCA CACTCGACCTAGACGGCGCCATAGATCCCGATCAAGAAGGCGGCCAAGCCCAAGAAGGCGGCCATCTCCTCGAAGAAGAACTCCGCCAAG AAGAATGCCTCCTCCACCAAGGCATAGAAGGAGTAGATCTCCAGTAAGACGAAGAAGACGTTCGTCAGCATCCTTGTCTGGGAGTAGCTC ATCATCCTCTTCATCTCGTTCACGGTCACCACCAAAGAAGCCTCCCAAGAGGACATCCAGCCCCCCTCGGAAAACTCGTAGGTTATCTCC TTCAGCAAGTCCTCCAAGGCGAAGGCACAGGCCATCACCTCCTGCAACTCCACCACCCAAAACTCGGCATTCCCCTACACCCCAGCAGTC AAACCGTACAAGAAAAAGTCGTGTTTCTGTGTCTCCAGGGAGAACTTCAGGTAAAGTGACAAAACATAAAGGTACTGAGAAAAGAGAATC CCCTTCACCAGCACCGAAGCCTAGAAAAGTAGAGTTATCTGAATCGGAAGAAGATAAAGGTGGCAAAATGGCTGCAGCAGATTCTGTGCA GCAGAGACGCCAATACAGACGACAAAACCAGCAGTCTTCATCTGACTCTGGCTCCTCCTCCTCCTCAGAAGATGAACGACCCAAGAGATC CCATGTGAAGAATGGTGAGGTTGGCAGGCGGCGGAGACATTCCCCTTCCCGGAGTGCTTCTCCATCACCACGAAAGCGCCAAAAAGAGAC TTCCCCTCGGATGCAGATGGGAAAGCGATGGCAATCGCCAGTGACTAAAAGTGGTAGACGGAGGAGAAGTCCATCCCCACCACCCACCAG AAGGCGACGGTCTCCTTCTCCCGCCCCTCCTCCTCGACGGCGCAGGACTCCCACACCACCACCACGACGAAGGACTCCTTCTCCTCCCCC ACGTCGGCGCTCACCTTCTCCTAGAAGATACTCTCCTCCAATACAGAGGAGATACTCTCCTTCTCCACCTCCAAAGAGAAGAACGGCTTC ACCTCCTCCCCCTCCTAAACGAAGAGCATCACCATCTCCACCACCAAAGCGGCGGGTCTCCCATTCTCCACCTCCCAAACAAAGAAGCTC CCCAGTCACCAAGAGACGTTCACCTTCATTATCATCCAAGCATAGGAAAGGGTCTTCCCCAAGCCGCTCTACCCGGGAGGCCCGATCACC ACAACCAAACAAACGGCATTCGCCCTCACCACGGCCTCGAGCTCCTCAGACCTCCTCAAGTCCTCCACCCGTTCGAAGAGGAGCGTCGTC ATCACCCCAAAGAAGGCAGTCCCCGTCTCCAAGTACTAGGCCCATTAGGAGAGTCTCCAGGACTCCGGAACCTAAAAAGATAAAAAAGGC TGCTTCCCCAAGCCCACAGTCTGTAAGAAGGGTCTCATCCTCCCGATCTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAAAGCCCCCAGC ACCTCCATCCCCCGTCCAGTCTCAGTCACCGTCTACAAACTGGTCACCAGCTGTACCGGTCAAAAAGGCCAAAAGCCCAACACCGAGCCC ATCACCGCCAAGAAATTCAGATCAGGAAGGAGGTGGAAAGAAAAAGAAGAAAAAGAAGGACAAGAAACACAAAAAGGATAAGAAGCACAA GAAGCACAAAAAACACAAGAAGGAAAAGGCTGTGGCTGCAGCTGCTGCAGCTGCTGTGACCCCTGCAGCCATTGCAGCTGCCACAACCAC ATTAGCACAGGAAGAGCCAGTGGCAGCGCCAGAGCCGAAGAAGGAGACTGAAAGTGAAGCTGAAGATAACCTTGATGATTTAGAAAAGCA CCTGCGTGAAAAGGCCCTGAGATCAATGAGGAAGGCCCAAGTGTCCCCACAGTCTTAGGGGGAAATGTTTGTTATGATGTAAATTTTATT TGGTTTGTACGCAGTTCAATTTCAAAATTGCTAAAATGTGTTTGAGCTTTAGACTATAACATTTGTTGTAATAATTGCTAGGTTGAAGTT CAACATGTAAAAAAAGGGGGCATGGATTTACATTGCAAAAGGTGTCCACAGTGTATTAGTGACATTCTTTCATTGACAGCTGACATAATT CATTGAGTGAAATATTTTAAGCCAAAAAAAAATTCCCTTTTTAAAAAAGGGGGTTTAAATACTGTTGGCATTTTTATGGTTCCTTTAAAT >In-frame_ENST00000531743_ENST00000374389_TCGA-KK-A6E1_FAU_chr11_64888452_-_SRRM1_chr1_24975349_length(amino acids)=957AA_start in transcript=154_stop in transcript=3027 MDRFPLPNLLYPRAFLGFSYKPSFLYSVANMQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPSAFLELKKEEIKQRQI EQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEP SVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRRRPSPRRRP SPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKT RHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSS SEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRMQMGKRWQSPVTKSGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPP RRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPS RSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSP EPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAVAAAAAAAVTP -------------------------------------------------------------- >In-frame_ENST00000525297_ENST00000323848_TCGA-KK-A6E1_FAU_chr11_64888452_-_SRRM1_chr1_24975349_length(transcript)=3641nt_BP=179nt TCGCCAATATGCAGCTCTTTGTCCGCGCCCAGGAGCTACACACCTTCGAGGTGACCGGCCAGGAAACGGTCGCCCAGATCAAGGCCCTGA CTACCCTGGAAGTAGCAGGCCGCATGCTTGGAGGTAAAGTCCATGGTTCCCTGGCCCGTGCTGGAAAAGTGAGAGGTCAGACTCCTAAGA ATCCAGACTCCAAAATGATGCAAATCAACCTGACTGGATTTTTGAATGGAAAAAATGCTCGAGAATTTATGGGAGAACTGTGGCCCCTGC TGCTAAGTGCACAAGAAAACATCGCGGGAATCCCTTCTGCTTTCCTAGAACTGAAGAAAGAAGAAATAAAACAAAGACAGATTGAACAAG AAAAACTGGCATCTATGAAAAAGCAAGATGAAGACAAAGATAAAAGAGATAAGGAAGAAAAAGAAAGCAGCAGAGAAAAAAGGGAGCGGT CTCGTAGCCCAAGAAGACGCAAATCCAGATCTCCTTCCCCTAGAAGACGATCTTCCCCTGTCAGGAGAGAGAGAAAGCGCAGTCATTCTC GATCTCCCCGTCACAGAACCAAGAGCCGGAGTCCTTCCCCTGCTCCAGAAAAGAAGGAAAAAACTCCAGAGCTCCCAGAACCTTCAGTGA AAGTAAAAGAACCTTCAGTACAAGAGGCTACTTCTACTAGTGACATTCTGAAAGTTCCCAAACCTGAACCTATACCAGAGCCTAAAGAAC CTTCTCCGGAAAAAAATTCCAAAAAAGAAAAGGAGAAGGAGAAGACCCGACCACGATCTCGGTCACGCTCCAAATCAAGATCCCGGACGC GGTCCCGCTCTCCTTCTCACACTCGACCTAGACGGCGCCATAGATCCCGATCAAGATCGTATTCACCTAGAAGGCGGCCAAGCCCAAGAA GGCGGCCATCTCCTCGAAGAAGAACTCCGCCAAGAAGAATGCCTCCTCCACCAAGGCATAGAAGGAGTAGATCTCCAGTAAGACGAAGAA GACGTTCGTCAGCATCCTTGTCTGGGAGTAGCTCATCATCCTCTTCATCTCGTTCACGGTCACCACCAAAGAAGCCTCCCAAGAGGACAT CCAGCCCCCCTCGGAAAACTCGTAGGTTATCTCCTTCAGCAAGTCCTCCAAGGCGAAGGCACAGGCCATCACCTCCTGCAACTCCACCAC CCAAAACTCGGCATTCCCCTACACCCCAGCAGTCAAACCGTACAAGAAAAAGTCGTGTTTCTGTGTCTCCAGGGAGAACTTCAGGTAAAG TGACAAAACATAAAGGTACTGAGAAAAGAGAATCCCCTTCACCAGCACCGAAGCCTAGAAAAGTAGAGTTATCTGAATCGGAAGAAGATA AAGGTGGCAAAATGGCTGCAGCAGATTCTGTGCAGCAGAGACGCCAATACAGACGACAAAACCAGCAGTCTTCATCTGACTCTGGCTCCT CCTCCTCCTCAGAAGATGAACGACCCAAGAGATCCCATGTGAAGAATGGTGAGGTTGGCAGGCGGCGGAGACATTCCCCTTCCCGGAGTG CTTCTCCATCACCACGAAAGCGCCAAAAAGAGACTTCCCCTCGTGGTAGACGGAGGAGAAGTCCATCCCCACCACCCACCAGAAGGCGAC GGTCTCCTTCTCCCGCCCCTCCTCCTCGACGGCGCAGGACTCCCACACCACCACCACGACGAAGGACTCCTTCTCCTCCCCCACGTCGGC GCTCACCTTCTCCTAGAAGATACTCTCCTCCAATACAGAGGAGATACTCTCCTTCTCCACCTCCAAAGAGAAGAACGGCTTCACCTCCTC CCCCTCCTAAACGAAGAGCATCACCATCTCCACCACCAAAGCGGCGGGTCTCCCATTCTCCACCTCCCAAACAAAGAAGCTCCCCAGTCA CCAAGAGACGTTCACCTTCATTATCATCCAAGCATAGGAAAGGGTCTTCCCCAAGCCGCTCTACCCGGGAGGCCCGATCACCACAACCAA ACAAACGGCATTCGCCCTCACCACGGCCTCGAGCTCCTCAGACCTCCTCAAGTCCTCCACCCGTTCGAAGAGGAGCGTCGTCATCACCCC AAAGAAGGCAGTCCCCGTCTCCAAGTACTAGGCCCATTAGGAGAGTCTCCAGGACTCCGGAACCTAAAAAGATAAAAAAGGCTGCTTCCC CAAGCCCACAGTCTGTAAGAAGGGTCTCATCCTCCCGATCTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCAT CCCCCGTCCAGTCTCAGTCACCGTCTACAAACTGGTCACCAGCTGTACCGGTCAAAAAGGCCAAAAGCCCAACACCGAGCCCATCACCGC CAAGAAATTCAGATCAGGAAGGAGGTGGAAAGAAAAAGAAGAAAAAGAAGGACAAGAAACACAAAAAGGATAAGAAGCACAAGAAGCACA AAAAACACAAGAAGGAAAAGGCTGTGGCTGCAGCTGCTGCAGCTGCTGTGACCCCTGCAGCCATTGCAGCTGCCACAACCACATTAGCAC AGGAAGAGCCAGTGGCAGCGCCAGAGCCGAAGAAGGAGACTGAAAGTGAAGCTGAAGATAACCTTGATGATTTAGAAAAGCACCTGCGTG AAAAGGCCCTGAGATCAATGAGGAAGGCCCAAGTGTCCCCACAGTCTTAGGGGGAAATGTTTGTTATGATGTAAATTTTATTTGGTTTGT ACGCAGTTCAATTTCAAAATTGCTAAAATGTGTTTGAGCTTTAGACTATAACATTTGTTGTAATAATTGCTAGGTTGAAGTTCAACATGT AAAAAAAGGGGGCATGGATTTACATTGCAAAAGGTGTCCACAGTGTATTAGTGACATTCTTTCATTGACAGCTGACATAATTCATTGAGT GAAATATTTTAAGCCAAAAAAAAATTCCCTTTTTAAAAAAGGGGGTTTAAATACTGTTGGCATTTTTATGGTTCCTTTAAATGCCCTAGC TATTCCCAGAGGGGTTTTTTTGTTTGTTTTTTTGGTTTTGATTTTCTTTTTGTTTTTCTTTCTTCTTCTTATTTTTTTCATTTGAGTCTT AGCTCCCATTTAAGTTATGCTTCTGACCTTGTATGGTCTGTAAGCTTGCCCAGAAATAAGACCACTGTTTTGAACTACCACAAAAGTATA AATGAATATTTTAATGCCACAATCTTTCCTGTTGCCTGTGGAGTCTCTGCTGAAATGAATCAGGATTCGAGCTCTAGGATGAGACAGAAA ATGAAAGCATGTTGTTTGCCAGGACACTGTGGGTTTATATTGATGTGTAACAAGTTGATTTGGAACACTGGACTCTCATTCTGTTATTCT GGTTTTGTTTTTTTTGTTTTGTTTTTTTTCTTTTGTAAAGGCAATGAGCTAGTCCCAGAAAGGATCCTTCAGTTACATACAATTTGTTTA ATGAAATGTCATGGCTCTGTTCATATTTTTGTCTTGTTCTTCCAATTGGTATATACAACTTTCAGAGCCTCTTGTATTTGGAAGGCTGGA AGGGCCCAGACTTTGGAATAGTGTCTTGGTTTCACTGTTTTTGTTTTGATTTTTTTTTTGTTTTGATTTTTTTTAAACTAAAGCTATATA >In-frame_ENST00000525297_ENST00000323848_TCGA-KK-A6E1_FAU_chr11_64888452_-_SRRM1_chr1_24975349_length(amino acids)=883AA_start in transcript=8_stop in transcript=2659 MQLFVRAQELHTFEVTGQETVAQIKALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLS AQENIAGIPSAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSP RHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSR SPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSP PRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGG KMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSP SPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKR RSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSP QSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKH -------------------------------------------------------------- >In-frame_ENST00000525297_ENST00000447431_TCGA-KK-A6E1_FAU_chr11_64888452_-_SRRM1_chr1_24975349_length(transcript)=3077nt_BP=179nt TCGCCAATATGCAGCTCTTTGTCCGCGCCCAGGAGCTACACACCTTCGAGGTGACCGGCCAGGAAACGGTCGCCCAGATCAAGGCCCTGA CTACCCTGGAAGTAGCAGGCCGCATGCTTGGAGGTAAAGTCCATGGTTCCCTGGCCCGTGCTGGAAAAGTGAGAGGTCAGACTCCTAAGA ATCCAGACTCCAAAATGATGCAAATCAACCTGACTGGATTTTTGAATGGAAAAAATGCTCGAGAATTTATGGGAGAACTGTGGCCCCTGC TGCTAAGTGCACAAGAAAACATCGCGGGAATCCCTTCTGCTTTCCTAGAACTGAAGAAAGAAGAAATAAAACAAAGACAGATTGAACAAG AAAAACTGGCATCTATGAAAAAGCAAGATGAAGACAAAGATAAAAGAGATAAGGAAGAAAAAGAAAGCAGCAGAGAAAAAAGGGAGCGGT CTCGTAGCCCAAGAAGACGCAAATCCAGATCTCCTTCCCCTAGAAGACGATCTTCCCCTGTCAGGAGAGAGAGAAAGCGCAGTCATTCTC GATCTCCCCGTCACAGAACCAAGAGCCGGAGTCCTTCCCCTGCTCCAGAAAAGAAGGAAAAAACTCCAGAGCTCCCAGAACCTTCAGTGA AAGTAAAAGAACCTTCAGTACAAGAGGCTACTTCTACTAGTGACATTCTGAAAGTTCCCAAACCTGAACCTATACCAGAGCCTAAAGAAC CTTCTCCGGAAAAAAATTCCAAAAAAGAAAAGGAGAAGGAGAAGACCCGACCACGATCTCGGTCACGCTCCAAATCAAGATCCCGGACGC GGTCCCGCTCTCCTTCTCACACTCGACCTAGACGGCGCCATAGATCCCGATCAAGATCGTATTCACCTAGAAGGCGGCCAAGCCCAAGAA GGCGGCCATCTCCTCGAAGAAGAACTCCGCCAAGAAGAATGCCTCCTCCACCAAGGCATAGAAGGAGTAGATCTCCAGTAAGACGAAGAA GACGTTCGTCAGCATCCTTGTCTGGGAGTAGCTCATCATCCTCTTCATCTCGTTCACGGTCACCACCAAAGAAGCCTCCCAAGAGGACAT CCAGCCCCCCTCGGAAAACTCGTAGGTTATCTCCTTCAGCAAGTCCTCCAAGGCGAAGGCACAGGCCATCACCTCCTGCAACTCCACCAC CCAAAACTCGGCATTCCCCTACACCCCAGCAGTCAAACCGTACAAGAAAAAGTCGTGTTTCTGTGTCTCCAGGGAGAACTTCAGTGACAA AACATAAAGGTACTGAGAAAAGAGAATCCCCTTCACCAGCACCGAAGCCTAGAAAAGTAGAGTTATCTGAATCGGAAGAAGATAAAGGTG GCAAAATGGCTGCAGCAGATTCTGTGCAGCAGAGACGCCAATACAGACGACAAAACCAGCAGTCTTCATCTGACTCTGGCTCCTCCTCCT CCTCAGAAGATGAACGACCCAAGAGATCCCATGTGAAGAATGGTGAGGTTGGCAGGCGGCGGAGACATTCCCCTTCCCGGAGTGCTTCTC CATCACCACGAAAGCGCCAAAAAGAGACTTCCCCTCGGATGCAGATGGGAAAGCGATGGCAATCGCCAGTGACTAAAAGTGGTAGACGGA GGAGAAGTCCATCCCCACCACCCACCAGAAGGCGACGGTCTCCTTCTCCCGCCCCTCCTCCTCGACGGCGCAGGACTCCCACACCACCAC CACGACGAAGGACTCCTTCTCCTCCCCCACGTCGGCGCTCACCTTCTCCTAGAAGATACTCTCCTCCAATACAGAGGAGATACTCTCCTT CTCCACCTCCAAAGAGAAGAACGGCTTCACCTCCTCCCCCTCCTAAACGAAGAGCATCACCATCTCCACCACCAAAGCGGCGGGTCTCCC ATTCTCCACCTCCCAAACAAAGAAGCTCCCCAGTCACCAAGAGACGTTCACCTTCATTATCATCCAAGCATAGGAAAGGGTCTTCCCCAA GCCGCTCTACCCGGGAGGCCCGATCACCACAACCAAACAAACGGCATTCGCCCTCACCACGGCCTCGAGCTCCTCAGACCTCCTCAAGTC CTCCACCCGTTCGAAGAGGAGCGTCGTCATCACCCCAAAGAAGGCAGTCCCCGTCTCCAAGTACTAGGCCCATTAGGAGAGTCTCCAGGA CTCCGGAACCTAAAAAGATAAAAAAGGCTGCTTCCCCAAGCCCACAGTCTGTAAGAAGGGTCTCATCCTCCCGATCTGTCTCCGGGTCTC CTGAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCCGTCCAGTCTCAGTCACCGTCTACAAACTGGTCACCAGCTGTACCGGTCA AAAAGGCCAAAAGCCCAACACCGAGCCCATCACCGCCAAGAAATTCAGATCAGGAAGGAGGTGGAAAGAAAAAGAAGAAAAAGAAGGACA AGAAACACAAAAAGGATAAGAAGCACAAGAAGCACAAAAAACACAAGAAGGAAAAGGCTGTGGCTGCAGCTGCTGCAGCTGCTGTGACCC CTGCAGCCATTGCAGCTGCCACAACCACATTAGCACAGGAAGAGCCAGTGGCAGCGCCAGAGCCGAAGAAGGAGACTGAAAGTGAAGCTG AAGATAACCTTGATGATTTAGAAAAGCACCTGCGTGAAAAGGCCCTGAGATCAATGAGGAAGGCCCAAGTGTCCCCACAGTCTTAGGGGG AAATGTTTGTTATGATGTAAATTTTATTTGGTTTGTACGCAGTTCAATTTCAAAATTGCTAAAATGTGTTTGAGCTTTAGACTATAACAT TTGTTGTAATAATTGCTAGGTTGAAGTTCAACATGTAAAAAAAGGGGGCATGGATTTACATTGCAAAAGGTGTCCACAGTGTATTAGTGA CATTCTTTCATTGACAGCTGACATAATTCATTGAGTGAAATATTTTAAGCCAAAAAAAAATTCCCTTTTTAAAAAAGGGGGTTTAAATAC TGTTGGCATTTTTATGGTTCCTTTAAATGCCCTAGCTATTCCCAGAGGGGTTTTTTTGTTTGTTTTTTTGGTTTTGATTTTCTTTTTGTT >In-frame_ENST00000525297_ENST00000447431_TCGA-KK-A6E1_FAU_chr11_64888452_-_SRRM1_chr1_24975349_length(amino acids)=895AA_start in transcript=8_stop in transcript=2695 MQLFVRAQELHTFEVTGQETVAQIKALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLS AQENIAGIPSAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSP RHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSR SPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSP PRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKM AAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRMQMGKRWQSPVTKSGRRRRS PSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSP PPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPE PKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGGKKKKKKKDKKH -------------------------------------------------------------- >In-frame_ENST00000525297_ENST00000374389_TCGA-KK-A6E1_FAU_chr11_64888452_-_SRRM1_chr1_24975349_length(transcript)=3027nt_BP=179nt TCGCCAATATGCAGCTCTTTGTCCGCGCCCAGGAGCTACACACCTTCGAGGTGACCGGCCAGGAAACGGTCGCCCAGATCAAGGCCCTGA CTACCCTGGAAGTAGCAGGCCGCATGCTTGGAGGTAAAGTCCATGGTTCCCTGGCCCGTGCTGGAAAAGTGAGAGGTCAGACTCCTAAGA ATCCAGACTCCAAAATGATGCAAATCAACCTGACTGGATTTTTGAATGGAAAAAATGCTCGAGAATTTATGGGAGAACTGTGGCCCCTGC TGCTAAGTGCACAAGAAAACATCGCGGGAATCCCTTCTGCTTTCCTAGAACTGAAGAAAGAAGAAATAAAACAAAGACAGATTGAACAAG AAAAACTGGCATCTATGAAAAAGCAAGATGAAGACAAAGATAAAAGAGATAAGGAAGAAAAAGAAAGCAGCAGAGAAAAAAGGGAGCGGT CTCGTAGCCCAAGAAGACGCAAATCCAGATCTCCTTCCCCTAGAAGACGATCTTCCCCTGTCAGGAGAGAGAGAAAGCGCAGTCATTCTC GATCTCCCCGTCACAGAACCAAGAGCCGGAGTCCTTCCCCTGCTCCAGAAAAGAAGGAAAAAACTCCAGAGCTCCCAGAACCTTCAGTGA AAGTAAAAGAACCTTCAGTACAAGAGGCTACTTCTACTAGTGACATTCTGAAAGTTCCCAAACCTGAACCTATACCAGAGCCTAAAGAAC CTTCTCCGGAAAAAAATTCCAAAAAAGAAAAGGAGAAGGAGAAGACCCGACCACGATCTCGGTCACGCTCCAAATCAAGATCCCGGACGC GGTCCCGCTCTCCTTCTCACACTCGACCTAGACGGCGCCATAGATCCCGATCAAGAAGGCGGCCAAGCCCAAGAAGGCGGCCATCTCCTC GAAGAAGAACTCCGCCAAGAAGAATGCCTCCTCCACCAAGGCATAGAAGGAGTAGATCTCCAGTAAGACGAAGAAGACGTTCGTCAGCAT CCTTGTCTGGGAGTAGCTCATCATCCTCTTCATCTCGTTCACGGTCACCACCAAAGAAGCCTCCCAAGAGGACATCCAGCCCCCCTCGGA AAACTCGTAGGTTATCTCCTTCAGCAAGTCCTCCAAGGCGAAGGCACAGGCCATCACCTCCTGCAACTCCACCACCCAAAACTCGGCATT CCCCTACACCCCAGCAGTCAAACCGTACAAGAAAAAGTCGTGTTTCTGTGTCTCCAGGGAGAACTTCAGGTAAAGTGACAAAACATAAAG GTACTGAGAAAAGAGAATCCCCTTCACCAGCACCGAAGCCTAGAAAAGTAGAGTTATCTGAATCGGAAGAAGATAAAGGTGGCAAAATGG CTGCAGCAGATTCTGTGCAGCAGAGACGCCAATACAGACGACAAAACCAGCAGTCTTCATCTGACTCTGGCTCCTCCTCCTCCTCAGAAG ATGAACGACCCAAGAGATCCCATGTGAAGAATGGTGAGGTTGGCAGGCGGCGGAGACATTCCCCTTCCCGGAGTGCTTCTCCATCACCAC GAAAGCGCCAAAAAGAGACTTCCCCTCGGATGCAGATGGGAAAGCGATGGCAATCGCCAGTGACTAAAAGTGGTAGACGGAGGAGAAGTC CATCCCCACCACCCACCAGAAGGCGACGGTCTCCTTCTCCCGCCCCTCCTCCTCGACGGCGCAGGACTCCCACACCACCACCACGACGAA GGACTCCTTCTCCTCCCCCACGTCGGCGCTCACCTTCTCCTAGAAGATACTCTCCTCCAATACAGAGGAGATACTCTCCTTCTCCACCTC CAAAGAGAAGAACGGCTTCACCTCCTCCCCCTCCTAAACGAAGAGCATCACCATCTCCACCACCAAAGCGGCGGGTCTCCCATTCTCCAC CTCCCAAACAAAGAAGCTCCCCAGTCACCAAGAGACGTTCACCTTCATTATCATCCAAGCATAGGAAAGGGTCTTCCCCAAGCCGCTCTA CCCGGGAGGCCCGATCACCACAACCAAACAAACGGCATTCGCCCTCACCACGGCCTCGAGCTCCTCAGACCTCCTCAAGTCCTCCACCCG TTCGAAGAGGAGCGTCGTCATCACCCCAAAGAAGGCAGTCCCCGTCTCCAAGTACTAGGCCCATTAGGAGAGTCTCCAGGACTCCGGAAC CTAAAAAGATAAAAAAGGCTGCTTCCCCAAGCCCACAGTCTGTAAGAAGGGTCTCATCCTCCCGATCTGTCTCCGGGTCTCCTGAGCCAG CAGCTAAAAAGCCCCCAGCACCTCCATCCCCCGTCCAGTCTCAGTCACCGTCTACAAACTGGTCACCAGCTGTACCGGTCAAAAAGGCCA AAAGCCCAACACCGAGCCCATCACCGCCAAGAAATTCAGATCAGGAAGGAGGTGGAAAGAAAAAGAAGAAAAAGAAGGACAAGAAACACA AAAAGGATAAGAAGCACAAGAAGCACAAAAAACACAAGAAGGAAAAGGCTGTGGCTGCAGCTGCTGCAGCTGCTGTGACCCCTGCAGCCA TTGCAGCTGCCACAACCACATTAGCACAGGAAGAGCCAGTGGCAGCGCCAGAGCCGAAGAAGGAGACTGAAAGTGAAGCTGAAGATAACC TTGATGATTTAGAAAAGCACCTGCGTGAAAAGGCCCTGAGATCAATGAGGAAGGCCCAAGTGTCCCCACAGTCTTAGGGGGAAATGTTTG TTATGATGTAAATTTTATTTGGTTTGTACGCAGTTCAATTTCAAAATTGCTAAAATGTGTTTGAGCTTTAGACTATAACATTTGTTGTAA TAATTGCTAGGTTGAAGTTCAACATGTAAAAAAAGGGGGCATGGATTTACATTGCAAAAGGTGTCCACAGTGTATTAGTGACATTCTTTC ATTGACAGCTGACATAATTCATTGAGTGAAATATTTTAAGCCAAAAAAAAATTCCCTTTTTAAAAAAGGGGGTTTAAATACTGTTGGCAT >In-frame_ENST00000525297_ENST00000374389_TCGA-KK-A6E1_FAU_chr11_64888452_-_SRRM1_chr1_24975349_length(amino acids)=892AA_start in transcript=8_stop in transcript=2686 MQLFVRAQELHTFEVTGQETVAQIKALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLS AQENIAGIPSAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSP RHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSR SPSHTRPRRRHRSRSRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTR RLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAA DSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRMQMGKRWQSPVTKSGRRRRSPSP PPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPK QRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKK IKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGGKKKKKKKDKKHKKD -------------------------------------------------------------- >In-frame_ENST00000531743_ENST00000323848_TCGA-KK-A6E1_FAU_chr11_64888453_-_SRRM1_chr1_24975350_length(transcript)=3982nt_BP=520nt CTTGTAGCAGGTTGGCTGCGGGGTCAGAAGGCGCGGGGGGAACCGAAGAACGGGGCCTGCTCCGTGGCCCTGCTCCAGTCCCTATCCGAA CTCCTTGGGAGGCCTGGCCTTCCCCACGTGAGCCGCCGCGACCACCATCCCGTCGCGATCGTTTCTGGACCGCTTTCCACTCCCAAATCT CCTTTATCCCAGAGCATTTCTTGGCTTCTCTTACAAGCCGTCTTTTCTTTACTCAGTCGCCAATATGCAGCTCTTTGTCCGCGCCCAGGA GCTACACACCTTCGAGGTGACCGGCCAGGAAACGGTCGCCCAGATCAAGGCTCATGTAGCCTCACTGGAGGGCATTGCCCCGGAAGATCA AGTCGTGCTCCTGGCAGGCGCGCCCCTGGAGGATGAGGCCACTCTGGGCCAGTGCGGGGTGGAGGCCCTGACTACCCTGGAAGTAGCAGG CCGCATGCTTGGAGGTAAAGTCCATGGTTCCCTGGCCCGTGCTGGAAAAGTGAGAGGTCAGACTCCTAAGAATCCAGACTCCAAAATGAT GCAAATCAACCTGACTGGATTTTTGAATGGAAAAAATGCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAGTGCACAAGAAAA CATCGCGGGAATCCCTTCTGCTTTCCTAGAACTGAAGAAAGAAGAAATAAAACAAAGACAGATTGAACAAGAAAAACTGGCATCTATGAA AAAGCAAGATGAAGACAAAGATAAAAGAGATAAGGAAGAAAAAGAAAGCAGCAGAGAAAAAAGGGAGCGGTCTCGTAGCCCAAGAAGACG CAAATCCAGATCTCCTTCCCCTAGAAGACGATCTTCCCCTGTCAGGAGAGAGAGAAAGCGCAGTCATTCTCGATCTCCCCGTCACAGAAC CAAGAGCCGGAGTCCTTCCCCTGCTCCAGAAAAGAAGGAAAAAACTCCAGAGCTCCCAGAACCTTCAGTGAAAGTAAAAGAACCTTCAGT ACAAGAGGCTACTTCTACTAGTGACATTCTGAAAGTTCCCAAACCTGAACCTATACCAGAGCCTAAAGAACCTTCTCCGGAAAAAAATTC CAAAAAAGAAAAGGAGAAGGAGAAGACCCGACCACGATCTCGGTCACGCTCCAAATCAAGATCCCGGACGCGGTCCCGCTCTCCTTCTCA CACTCGACCTAGACGGCGCCATAGATCCCGATCAAGATCGTATTCACCTAGAAGGCGGCCAAGCCCAAGAAGGCGGCCATCTCCTCGAAG AAGAACTCCGCCAAGAAGAATGCCTCCTCCACCAAGGCATAGAAGGAGTAGATCTCCAGTAAGACGAAGAAGACGTTCGTCAGCATCCTT GTCTGGGAGTAGCTCATCATCCTCTTCATCTCGTTCACGGTCACCACCAAAGAAGCCTCCCAAGAGGACATCCAGCCCCCCTCGGAAAAC TCGTAGGTTATCTCCTTCAGCAAGTCCTCCAAGGCGAAGGCACAGGCCATCACCTCCTGCAACTCCACCACCCAAAACTCGGCATTCCCC TACACCCCAGCAGTCAAACCGTACAAGAAAAAGTCGTGTTTCTGTGTCTCCAGGGAGAACTTCAGGTAAAGTGACAAAACATAAAGGTAC TGAGAAAAGAGAATCCCCTTCACCAGCACCGAAGCCTAGAAAAGTAGAGTTATCTGAATCGGAAGAAGATAAAGGTGGCAAAATGGCTGC AGCAGATTCTGTGCAGCAGAGACGCCAATACAGACGACAAAACCAGCAGTCTTCATCTGACTCTGGCTCCTCCTCCTCCTCAGAAGATGA ACGACCCAAGAGATCCCATGTGAAGAATGGTGAGGTTGGCAGGCGGCGGAGACATTCCCCTTCCCGGAGTGCTTCTCCATCACCACGAAA GCGCCAAAAAGAGACTTCCCCTCGTGGTAGACGGAGGAGAAGTCCATCCCCACCACCCACCAGAAGGCGACGGTCTCCTTCTCCCGCCCC TCCTCCTCGACGGCGCAGGACTCCCACACCACCACCACGACGAAGGACTCCTTCTCCTCCCCCACGTCGGCGCTCACCTTCTCCTAGAAG ATACTCTCCTCCAATACAGAGGAGATACTCTCCTTCTCCACCTCCAAAGAGAAGAACGGCTTCACCTCCTCCCCCTCCTAAACGAAGAGC ATCACCATCTCCACCACCAAAGCGGCGGGTCTCCCATTCTCCACCTCCCAAACAAAGAAGCTCCCCAGTCACCAAGAGACGTTCACCTTC ATTATCATCCAAGCATAGGAAAGGGTCTTCCCCAAGCCGCTCTACCCGGGAGGCCCGATCACCACAACCAAACAAACGGCATTCGCCCTC ACCACGGCCTCGAGCTCCTCAGACCTCCTCAAGTCCTCCACCCGTTCGAAGAGGAGCGTCGTCATCACCCCAAAGAAGGCAGTCCCCGTC TCCAAGTACTAGGCCCATTAGGAGAGTCTCCAGGACTCCGGAACCTAAAAAGATAAAAAAGGCTGCTTCCCCAAGCCCACAGTCTGTAAG AAGGGTCTCATCCTCCCGATCTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCCGTCCAGTCTCAGTC ACCGTCTACAAACTGGTCACCAGCTGTACCGGTCAAAAAGGCCAAAAGCCCAACACCGAGCCCATCACCGCCAAGAAATTCAGATCAGGA AGGAGGTGGAAAGAAAAAGAAGAAAAAGAAGGACAAGAAACACAAAAAGGATAAGAAGCACAAGAAGCACAAAAAACACAAGAAGGAAAA GGCTGTGGCTGCAGCTGCTGCAGCTGCTGTGACCCCTGCAGCCATTGCAGCTGCCACAACCACATTAGCACAGGAAGAGCCAGTGGCAGC GCCAGAGCCGAAGAAGGAGACTGAAAGTGAAGCTGAAGATAACCTTGATGATTTAGAAAAGCACCTGCGTGAAAAGGCCCTGAGATCAAT GAGGAAGGCCCAAGTGTCCCCACAGTCTTAGGGGGAAATGTTTGTTATGATGTAAATTTTATTTGGTTTGTACGCAGTTCAATTTCAAAA TTGCTAAAATGTGTTTGAGCTTTAGACTATAACATTTGTTGTAATAATTGCTAGGTTGAAGTTCAACATGTAAAAAAAGGGGGCATGGAT TTACATTGCAAAAGGTGTCCACAGTGTATTAGTGACATTCTTTCATTGACAGCTGACATAATTCATTGAGTGAAATATTTTAAGCCAAAA AAAAATTCCCTTTTTAAAAAAGGGGGTTTAAATACTGTTGGCATTTTTATGGTTCCTTTAAATGCCCTAGCTATTCCCAGAGGGGTTTTT TTGTTTGTTTTTTTGGTTTTGATTTTCTTTTTGTTTTTCTTTCTTCTTCTTATTTTTTTCATTTGAGTCTTAGCTCCCATTTAAGTTATG CTTCTGACCTTGTATGGTCTGTAAGCTTGCCCAGAAATAAGACCACTGTTTTGAACTACCACAAAAGTATAAATGAATATTTTAATGCCA CAATCTTTCCTGTTGCCTGTGGAGTCTCTGCTGAAATGAATCAGGATTCGAGCTCTAGGATGAGACAGAAAATGAAAGCATGTTGTTTGC CAGGACACTGTGGGTTTATATTGATGTGTAACAAGTTGATTTGGAACACTGGACTCTCATTCTGTTATTCTGGTTTTGTTTTTTTTGTTT TGTTTTTTTTCTTTTGTAAAGGCAATGAGCTAGTCCCAGAAAGGATCCTTCAGTTACATACAATTTGTTTAATGAAATGTCATGGCTCTG TTCATATTTTTGTCTTGTTCTTCCAATTGGTATATACAACTTTCAGAGCCTCTTGTATTTGGAAGGCTGGAAGGGCCCAGACTTTGGAAT AGTGTCTTGGTTTCACTGTTTTTGTTTTGATTTTTTTTTTGTTTTGATTTTTTTTAAACTAAAGCTATATAAAGCTTGTGGATTAAACAG >In-frame_ENST00000531743_ENST00000323848_TCGA-KK-A6E1_FAU_chr11_64888453_-_SRRM1_chr1_24975350_length(amino acids)=948AA_start in transcript=154_stop in transcript=3000 MDRFPLPNLLYPRAFLGFSYKPSFLYSVANMQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPSAFLELKKEEIKQRQI EQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEP SVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPS PRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPAT PPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDS GSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPP RRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSP QPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPA PPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAVAAAAAAAVTPAAIAAATTT -------------------------------------------------------------- >In-frame_ENST00000531743_ENST00000447431_TCGA-KK-A6E1_FAU_chr11_64888453_-_SRRM1_chr1_24975350_length(transcript)=3418nt_BP=520nt CTTGTAGCAGGTTGGCTGCGGGGTCAGAAGGCGCGGGGGGAACCGAAGAACGGGGCCTGCTCCGTGGCCCTGCTCCAGTCCCTATCCGAA CTCCTTGGGAGGCCTGGCCTTCCCCACGTGAGCCGCCGCGACCACCATCCCGTCGCGATCGTTTCTGGACCGCTTTCCACTCCCAAATCT CCTTTATCCCAGAGCATTTCTTGGCTTCTCTTACAAGCCGTCTTTTCTTTACTCAGTCGCCAATATGCAGCTCTTTGTCCGCGCCCAGGA GCTACACACCTTCGAGGTGACCGGCCAGGAAACGGTCGCCCAGATCAAGGCTCATGTAGCCTCACTGGAGGGCATTGCCCCGGAAGATCA AGTCGTGCTCCTGGCAGGCGCGCCCCTGGAGGATGAGGCCACTCTGGGCCAGTGCGGGGTGGAGGCCCTGACTACCCTGGAAGTAGCAGG CCGCATGCTTGGAGGTAAAGTCCATGGTTCCCTGGCCCGTGCTGGAAAAGTGAGAGGTCAGACTCCTAAGAATCCAGACTCCAAAATGAT GCAAATCAACCTGACTGGATTTTTGAATGGAAAAAATGCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAGTGCACAAGAAAA CATCGCGGGAATCCCTTCTGCTTTCCTAGAACTGAAGAAAGAAGAAATAAAACAAAGACAGATTGAACAAGAAAAACTGGCATCTATGAA AAAGCAAGATGAAGACAAAGATAAAAGAGATAAGGAAGAAAAAGAAAGCAGCAGAGAAAAAAGGGAGCGGTCTCGTAGCCCAAGAAGACG CAAATCCAGATCTCCTTCCCCTAGAAGACGATCTTCCCCTGTCAGGAGAGAGAGAAAGCGCAGTCATTCTCGATCTCCCCGTCACAGAAC CAAGAGCCGGAGTCCTTCCCCTGCTCCAGAAAAGAAGGAAAAAACTCCAGAGCTCCCAGAACCTTCAGTGAAAGTAAAAGAACCTTCAGT ACAAGAGGCTACTTCTACTAGTGACATTCTGAAAGTTCCCAAACCTGAACCTATACCAGAGCCTAAAGAACCTTCTCCGGAAAAAAATTC CAAAAAAGAAAAGGAGAAGGAGAAGACCCGACCACGATCTCGGTCACGCTCCAAATCAAGATCCCGGACGCGGTCCCGCTCTCCTTCTCA CACTCGACCTAGACGGCGCCATAGATCCCGATCAAGATCGTATTCACCTAGAAGGCGGCCAAGCCCAAGAAGGCGGCCATCTCCTCGAAG AAGAACTCCGCCAAGAAGAATGCCTCCTCCACCAAGGCATAGAAGGAGTAGATCTCCAGTAAGACGAAGAAGACGTTCGTCAGCATCCTT GTCTGGGAGTAGCTCATCATCCTCTTCATCTCGTTCACGGTCACCACCAAAGAAGCCTCCCAAGAGGACATCCAGCCCCCCTCGGAAAAC TCGTAGGTTATCTCCTTCAGCAAGTCCTCCAAGGCGAAGGCACAGGCCATCACCTCCTGCAACTCCACCACCCAAAACTCGGCATTCCCC TACACCCCAGCAGTCAAACCGTACAAGAAAAAGTCGTGTTTCTGTGTCTCCAGGGAGAACTTCAGTGACAAAACATAAAGGTACTGAGAA AAGAGAATCCCCTTCACCAGCACCGAAGCCTAGAAAAGTAGAGTTATCTGAATCGGAAGAAGATAAAGGTGGCAAAATGGCTGCAGCAGA TTCTGTGCAGCAGAGACGCCAATACAGACGACAAAACCAGCAGTCTTCATCTGACTCTGGCTCCTCCTCCTCCTCAGAAGATGAACGACC CAAGAGATCCCATGTGAAGAATGGTGAGGTTGGCAGGCGGCGGAGACATTCCCCTTCCCGGAGTGCTTCTCCATCACCACGAAAGCGCCA AAAAGAGACTTCCCCTCGGATGCAGATGGGAAAGCGATGGCAATCGCCAGTGACTAAAAGTGGTAGACGGAGGAGAAGTCCATCCCCACC ACCCACCAGAAGGCGACGGTCTCCTTCTCCCGCCCCTCCTCCTCGACGGCGCAGGACTCCCACACCACCACCACGACGAAGGACTCCTTC TCCTCCCCCACGTCGGCGCTCACCTTCTCCTAGAAGATACTCTCCTCCAATACAGAGGAGATACTCTCCTTCTCCACCTCCAAAGAGAAG AACGGCTTCACCTCCTCCCCCTCCTAAACGAAGAGCATCACCATCTCCACCACCAAAGCGGCGGGTCTCCCATTCTCCACCTCCCAAACA AAGAAGCTCCCCAGTCACCAAGAGACGTTCACCTTCATTATCATCCAAGCATAGGAAAGGGTCTTCCCCAAGCCGCTCTACCCGGGAGGC CCGATCACCACAACCAAACAAACGGCATTCGCCCTCACCACGGCCTCGAGCTCCTCAGACCTCCTCAAGTCCTCCACCCGTTCGAAGAGG AGCGTCGTCATCACCCCAAAGAAGGCAGTCCCCGTCTCCAAGTACTAGGCCCATTAGGAGAGTCTCCAGGACTCCGGAACCTAAAAAGAT AAAAAAGGCTGCTTCCCCAAGCCCACAGTCTGTAAGAAGGGTCTCATCCTCCCGATCTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAAA GCCCCCAGCACCTCCATCCCCCGTCCAGTCTCAGTCACCGTCTACAAACTGGTCACCAGCTGTACCGGTCAAAAAGGCCAAAAGCCCAAC ACCGAGCCCATCACCGCCAAGAAATTCAGATCAGGAAGGAGGTGGAAAGAAAAAGAAGAAAAAGAAGGACAAGAAACACAAAAAGGATAA GAAGCACAAGAAGCACAAAAAACACAAGAAGGAAAAGGCTGTGGCTGCAGCTGCTGCAGCTGCTGTGACCCCTGCAGCCATTGCAGCTGC CACAACCACATTAGCACAGGAAGAGCCAGTGGCAGCGCCAGAGCCGAAGAAGGAGACTGAAAGTGAAGCTGAAGATAACCTTGATGATTT AGAAAAGCACCTGCGTGAAAAGGCCCTGAGATCAATGAGGAAGGCCCAAGTGTCCCCACAGTCTTAGGGGGAAATGTTTGTTATGATGTA AATTTTATTTGGTTTGTACGCAGTTCAATTTCAAAATTGCTAAAATGTGTTTGAGCTTTAGACTATAACATTTGTTGTAATAATTGCTAG GTTGAAGTTCAACATGTAAAAAAAGGGGGCATGGATTTACATTGCAAAAGGTGTCCACAGTGTATTAGTGACATTCTTTCATTGACAGCT GACATAATTCATTGAGTGAAATATTTTAAGCCAAAAAAAAATTCCCTTTTTAAAAAAGGGGGTTTAAATACTGTTGGCATTTTTATGGTT >In-frame_ENST00000531743_ENST00000447431_TCGA-KK-A6E1_FAU_chr11_64888453_-_SRRM1_chr1_24975350_length(amino acids)=960AA_start in transcript=154_stop in transcript=3036 MDRFPLPNLLYPRAFLGFSYKPSFLYSVANMQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPSAFLELKKEEIKQRQI EQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEP SVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPS PRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPAT PPPKTRHSPTPQQSNRTRKSRVSVSPGRTSVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGS SSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRMQMGKRWQSPVTKSGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPT PPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGS SPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVS GSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAVAAAAAAA -------------------------------------------------------------- >In-frame_ENST00000531743_ENST00000374389_TCGA-KK-A6E1_FAU_chr11_64888453_-_SRRM1_chr1_24975350_length(transcript)=3368nt_BP=520nt CTTGTAGCAGGTTGGCTGCGGGGTCAGAAGGCGCGGGGGGAACCGAAGAACGGGGCCTGCTCCGTGGCCCTGCTCCAGTCCCTATCCGAA CTCCTTGGGAGGCCTGGCCTTCCCCACGTGAGCCGCCGCGACCACCATCCCGTCGCGATCGTTTCTGGACCGCTTTCCACTCCCAAATCT CCTTTATCCCAGAGCATTTCTTGGCTTCTCTTACAAGCCGTCTTTTCTTTACTCAGTCGCCAATATGCAGCTCTTTGTCCGCGCCCAGGA GCTACACACCTTCGAGGTGACCGGCCAGGAAACGGTCGCCCAGATCAAGGCTCATGTAGCCTCACTGGAGGGCATTGCCCCGGAAGATCA AGTCGTGCTCCTGGCAGGCGCGCCCCTGGAGGATGAGGCCACTCTGGGCCAGTGCGGGGTGGAGGCCCTGACTACCCTGGAAGTAGCAGG CCGCATGCTTGGAGGTAAAGTCCATGGTTCCCTGGCCCGTGCTGGAAAAGTGAGAGGTCAGACTCCTAAGAATCCAGACTCCAAAATGAT GCAAATCAACCTGACTGGATTTTTGAATGGAAAAAATGCTCGAGAATTTATGGGAGAACTGTGGCCCCTGCTGCTAAGTGCACAAGAAAA CATCGCGGGAATCCCTTCTGCTTTCCTAGAACTGAAGAAAGAAGAAATAAAACAAAGACAGATTGAACAAGAAAAACTGGCATCTATGAA AAAGCAAGATGAAGACAAAGATAAAAGAGATAAGGAAGAAAAAGAAAGCAGCAGAGAAAAAAGGGAGCGGTCTCGTAGCCCAAGAAGACG CAAATCCAGATCTCCTTCCCCTAGAAGACGATCTTCCCCTGTCAGGAGAGAGAGAAAGCGCAGTCATTCTCGATCTCCCCGTCACAGAAC CAAGAGCCGGAGTCCTTCCCCTGCTCCAGAAAAGAAGGAAAAAACTCCAGAGCTCCCAGAACCTTCAGTGAAAGTAAAAGAACCTTCAGT ACAAGAGGCTACTTCTACTAGTGACATTCTGAAAGTTCCCAAACCTGAACCTATACCAGAGCCTAAAGAACCTTCTCCGGAAAAAAATTC CAAAAAAGAAAAGGAGAAGGAGAAGACCCGACCACGATCTCGGTCACGCTCCAAATCAAGATCCCGGACGCGGTCCCGCTCTCCTTCTCA CACTCGACCTAGACGGCGCCATAGATCCCGATCAAGAAGGCGGCCAAGCCCAAGAAGGCGGCCATCTCCTCGAAGAAGAACTCCGCCAAG AAGAATGCCTCCTCCACCAAGGCATAGAAGGAGTAGATCTCCAGTAAGACGAAGAAGACGTTCGTCAGCATCCTTGTCTGGGAGTAGCTC ATCATCCTCTTCATCTCGTTCACGGTCACCACCAAAGAAGCCTCCCAAGAGGACATCCAGCCCCCCTCGGAAAACTCGTAGGTTATCTCC TTCAGCAAGTCCTCCAAGGCGAAGGCACAGGCCATCACCTCCTGCAACTCCACCACCCAAAACTCGGCATTCCCCTACACCCCAGCAGTC AAACCGTACAAGAAAAAGTCGTGTTTCTGTGTCTCCAGGGAGAACTTCAGGTAAAGTGACAAAACATAAAGGTACTGAGAAAAGAGAATC CCCTTCACCAGCACCGAAGCCTAGAAAAGTAGAGTTATCTGAATCGGAAGAAGATAAAGGTGGCAAAATGGCTGCAGCAGATTCTGTGCA GCAGAGACGCCAATACAGACGACAAAACCAGCAGTCTTCATCTGACTCTGGCTCCTCCTCCTCCTCAGAAGATGAACGACCCAAGAGATC CCATGTGAAGAATGGTGAGGTTGGCAGGCGGCGGAGACATTCCCCTTCCCGGAGTGCTTCTCCATCACCACGAAAGCGCCAAAAAGAGAC TTCCCCTCGGATGCAGATGGGAAAGCGATGGCAATCGCCAGTGACTAAAAGTGGTAGACGGAGGAGAAGTCCATCCCCACCACCCACCAG AAGGCGACGGTCTCCTTCTCCCGCCCCTCCTCCTCGACGGCGCAGGACTCCCACACCACCACCACGACGAAGGACTCCTTCTCCTCCCCC ACGTCGGCGCTCACCTTCTCCTAGAAGATACTCTCCTCCAATACAGAGGAGATACTCTCCTTCTCCACCTCCAAAGAGAAGAACGGCTTC ACCTCCTCCCCCTCCTAAACGAAGAGCATCACCATCTCCACCACCAAAGCGGCGGGTCTCCCATTCTCCACCTCCCAAACAAAGAAGCTC CCCAGTCACCAAGAGACGTTCACCTTCATTATCATCCAAGCATAGGAAAGGGTCTTCCCCAAGCCGCTCTACCCGGGAGGCCCGATCACC ACAACCAAACAAACGGCATTCGCCCTCACCACGGCCTCGAGCTCCTCAGACCTCCTCAAGTCCTCCACCCGTTCGAAGAGGAGCGTCGTC ATCACCCCAAAGAAGGCAGTCCCCGTCTCCAAGTACTAGGCCCATTAGGAGAGTCTCCAGGACTCCGGAACCTAAAAAGATAAAAAAGGC TGCTTCCCCAAGCCCACAGTCTGTAAGAAGGGTCTCATCCTCCCGATCTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAAAGCCCCCAGC ACCTCCATCCCCCGTCCAGTCTCAGTCACCGTCTACAAACTGGTCACCAGCTGTACCGGTCAAAAAGGCCAAAAGCCCAACACCGAGCCC ATCACCGCCAAGAAATTCAGATCAGGAAGGAGGTGGAAAGAAAAAGAAGAAAAAGAAGGACAAGAAACACAAAAAGGATAAGAAGCACAA GAAGCACAAAAAACACAAGAAGGAAAAGGCTGTGGCTGCAGCTGCTGCAGCTGCTGTGACCCCTGCAGCCATTGCAGCTGCCACAACCAC ATTAGCACAGGAAGAGCCAGTGGCAGCGCCAGAGCCGAAGAAGGAGACTGAAAGTGAAGCTGAAGATAACCTTGATGATTTAGAAAAGCA CCTGCGTGAAAAGGCCCTGAGATCAATGAGGAAGGCCCAAGTGTCCCCACAGTCTTAGGGGGAAATGTTTGTTATGATGTAAATTTTATT TGGTTTGTACGCAGTTCAATTTCAAAATTGCTAAAATGTGTTTGAGCTTTAGACTATAACATTTGTTGTAATAATTGCTAGGTTGAAGTT CAACATGTAAAAAAAGGGGGCATGGATTTACATTGCAAAAGGTGTCCACAGTGTATTAGTGACATTCTTTCATTGACAGCTGACATAATT CATTGAGTGAAATATTTTAAGCCAAAAAAAAATTCCCTTTTTAAAAAAGGGGGTTTAAATACTGTTGGCATTTTTATGGTTCCTTTAAAT >In-frame_ENST00000531743_ENST00000374389_TCGA-KK-A6E1_FAU_chr11_64888453_-_SRRM1_chr1_24975350_length(amino acids)=957AA_start in transcript=154_stop in transcript=3027 MDRFPLPNLLYPRAFLGFSYKPSFLYSVANMQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPSAFLELKKEEIKQRQI EQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEP SVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRRRPSPRRRP SPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKT RHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSS SEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRMQMGKRWQSPVTKSGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPP RRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPS RSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSP EPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAVAAAAAAAVTP -------------------------------------------------------------- >In-frame_ENST00000525297_ENST00000323848_TCGA-KK-A6E1_FAU_chr11_64888453_-_SRRM1_chr1_24975350_length(transcript)=3641nt_BP=179nt TCGCCAATATGCAGCTCTTTGTCCGCGCCCAGGAGCTACACACCTTCGAGGTGACCGGCCAGGAAACGGTCGCCCAGATCAAGGCCCTGA CTACCCTGGAAGTAGCAGGCCGCATGCTTGGAGGTAAAGTCCATGGTTCCCTGGCCCGTGCTGGAAAAGTGAGAGGTCAGACTCCTAAGA ATCCAGACTCCAAAATGATGCAAATCAACCTGACTGGATTTTTGAATGGAAAAAATGCTCGAGAATTTATGGGAGAACTGTGGCCCCTGC TGCTAAGTGCACAAGAAAACATCGCGGGAATCCCTTCTGCTTTCCTAGAACTGAAGAAAGAAGAAATAAAACAAAGACAGATTGAACAAG AAAAACTGGCATCTATGAAAAAGCAAGATGAAGACAAAGATAAAAGAGATAAGGAAGAAAAAGAAAGCAGCAGAGAAAAAAGGGAGCGGT CTCGTAGCCCAAGAAGACGCAAATCCAGATCTCCTTCCCCTAGAAGACGATCTTCCCCTGTCAGGAGAGAGAGAAAGCGCAGTCATTCTC GATCTCCCCGTCACAGAACCAAGAGCCGGAGTCCTTCCCCTGCTCCAGAAAAGAAGGAAAAAACTCCAGAGCTCCCAGAACCTTCAGTGA AAGTAAAAGAACCTTCAGTACAAGAGGCTACTTCTACTAGTGACATTCTGAAAGTTCCCAAACCTGAACCTATACCAGAGCCTAAAGAAC CTTCTCCGGAAAAAAATTCCAAAAAAGAAAAGGAGAAGGAGAAGACCCGACCACGATCTCGGTCACGCTCCAAATCAAGATCCCGGACGC GGTCCCGCTCTCCTTCTCACACTCGACCTAGACGGCGCCATAGATCCCGATCAAGATCGTATTCACCTAGAAGGCGGCCAAGCCCAAGAA GGCGGCCATCTCCTCGAAGAAGAACTCCGCCAAGAAGAATGCCTCCTCCACCAAGGCATAGAAGGAGTAGATCTCCAGTAAGACGAAGAA GACGTTCGTCAGCATCCTTGTCTGGGAGTAGCTCATCATCCTCTTCATCTCGTTCACGGTCACCACCAAAGAAGCCTCCCAAGAGGACAT CCAGCCCCCCTCGGAAAACTCGTAGGTTATCTCCTTCAGCAAGTCCTCCAAGGCGAAGGCACAGGCCATCACCTCCTGCAACTCCACCAC CCAAAACTCGGCATTCCCCTACACCCCAGCAGTCAAACCGTACAAGAAAAAGTCGTGTTTCTGTGTCTCCAGGGAGAACTTCAGGTAAAG TGACAAAACATAAAGGTACTGAGAAAAGAGAATCCCCTTCACCAGCACCGAAGCCTAGAAAAGTAGAGTTATCTGAATCGGAAGAAGATA AAGGTGGCAAAATGGCTGCAGCAGATTCTGTGCAGCAGAGACGCCAATACAGACGACAAAACCAGCAGTCTTCATCTGACTCTGGCTCCT CCTCCTCCTCAGAAGATGAACGACCCAAGAGATCCCATGTGAAGAATGGTGAGGTTGGCAGGCGGCGGAGACATTCCCCTTCCCGGAGTG CTTCTCCATCACCACGAAAGCGCCAAAAAGAGACTTCCCCTCGTGGTAGACGGAGGAGAAGTCCATCCCCACCACCCACCAGAAGGCGAC GGTCTCCTTCTCCCGCCCCTCCTCCTCGACGGCGCAGGACTCCCACACCACCACCACGACGAAGGACTCCTTCTCCTCCCCCACGTCGGC GCTCACCTTCTCCTAGAAGATACTCTCCTCCAATACAGAGGAGATACTCTCCTTCTCCACCTCCAAAGAGAAGAACGGCTTCACCTCCTC CCCCTCCTAAACGAAGAGCATCACCATCTCCACCACCAAAGCGGCGGGTCTCCCATTCTCCACCTCCCAAACAAAGAAGCTCCCCAGTCA CCAAGAGACGTTCACCTTCATTATCATCCAAGCATAGGAAAGGGTCTTCCCCAAGCCGCTCTACCCGGGAGGCCCGATCACCACAACCAA ACAAACGGCATTCGCCCTCACCACGGCCTCGAGCTCCTCAGACCTCCTCAAGTCCTCCACCCGTTCGAAGAGGAGCGTCGTCATCACCCC AAAGAAGGCAGTCCCCGTCTCCAAGTACTAGGCCCATTAGGAGAGTCTCCAGGACTCCGGAACCTAAAAAGATAAAAAAGGCTGCTTCCC CAAGCCCACAGTCTGTAAGAAGGGTCTCATCCTCCCGATCTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCAT CCCCCGTCCAGTCTCAGTCACCGTCTACAAACTGGTCACCAGCTGTACCGGTCAAAAAGGCCAAAAGCCCAACACCGAGCCCATCACCGC CAAGAAATTCAGATCAGGAAGGAGGTGGAAAGAAAAAGAAGAAAAAGAAGGACAAGAAACACAAAAAGGATAAGAAGCACAAGAAGCACA AAAAACACAAGAAGGAAAAGGCTGTGGCTGCAGCTGCTGCAGCTGCTGTGACCCCTGCAGCCATTGCAGCTGCCACAACCACATTAGCAC AGGAAGAGCCAGTGGCAGCGCCAGAGCCGAAGAAGGAGACTGAAAGTGAAGCTGAAGATAACCTTGATGATTTAGAAAAGCACCTGCGTG AAAAGGCCCTGAGATCAATGAGGAAGGCCCAAGTGTCCCCACAGTCTTAGGGGGAAATGTTTGTTATGATGTAAATTTTATTTGGTTTGT ACGCAGTTCAATTTCAAAATTGCTAAAATGTGTTTGAGCTTTAGACTATAACATTTGTTGTAATAATTGCTAGGTTGAAGTTCAACATGT AAAAAAAGGGGGCATGGATTTACATTGCAAAAGGTGTCCACAGTGTATTAGTGACATTCTTTCATTGACAGCTGACATAATTCATTGAGT GAAATATTTTAAGCCAAAAAAAAATTCCCTTTTTAAAAAAGGGGGTTTAAATACTGTTGGCATTTTTATGGTTCCTTTAAATGCCCTAGC TATTCCCAGAGGGGTTTTTTTGTTTGTTTTTTTGGTTTTGATTTTCTTTTTGTTTTTCTTTCTTCTTCTTATTTTTTTCATTTGAGTCTT AGCTCCCATTTAAGTTATGCTTCTGACCTTGTATGGTCTGTAAGCTTGCCCAGAAATAAGACCACTGTTTTGAACTACCACAAAAGTATA AATGAATATTTTAATGCCACAATCTTTCCTGTTGCCTGTGGAGTCTCTGCTGAAATGAATCAGGATTCGAGCTCTAGGATGAGACAGAAA ATGAAAGCATGTTGTTTGCCAGGACACTGTGGGTTTATATTGATGTGTAACAAGTTGATTTGGAACACTGGACTCTCATTCTGTTATTCT GGTTTTGTTTTTTTTGTTTTGTTTTTTTTCTTTTGTAAAGGCAATGAGCTAGTCCCAGAAAGGATCCTTCAGTTACATACAATTTGTTTA ATGAAATGTCATGGCTCTGTTCATATTTTTGTCTTGTTCTTCCAATTGGTATATACAACTTTCAGAGCCTCTTGTATTTGGAAGGCTGGA AGGGCCCAGACTTTGGAATAGTGTCTTGGTTTCACTGTTTTTGTTTTGATTTTTTTTTTGTTTTGATTTTTTTTAAACTAAAGCTATATA >In-frame_ENST00000525297_ENST00000323848_TCGA-KK-A6E1_FAU_chr11_64888453_-_SRRM1_chr1_24975350_length(amino acids)=883AA_start in transcript=8_stop in transcript=2659 MQLFVRAQELHTFEVTGQETVAQIKALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLS AQENIAGIPSAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSP RHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSR SPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSP PRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGG KMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSP SPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKR RSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSP QSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKH -------------------------------------------------------------- >In-frame_ENST00000525297_ENST00000447431_TCGA-KK-A6E1_FAU_chr11_64888453_-_SRRM1_chr1_24975350_length(transcript)=3077nt_BP=179nt TCGCCAATATGCAGCTCTTTGTCCGCGCCCAGGAGCTACACACCTTCGAGGTGACCGGCCAGGAAACGGTCGCCCAGATCAAGGCCCTGA CTACCCTGGAAGTAGCAGGCCGCATGCTTGGAGGTAAAGTCCATGGTTCCCTGGCCCGTGCTGGAAAAGTGAGAGGTCAGACTCCTAAGA ATCCAGACTCCAAAATGATGCAAATCAACCTGACTGGATTTTTGAATGGAAAAAATGCTCGAGAATTTATGGGAGAACTGTGGCCCCTGC TGCTAAGTGCACAAGAAAACATCGCGGGAATCCCTTCTGCTTTCCTAGAACTGAAGAAAGAAGAAATAAAACAAAGACAGATTGAACAAG AAAAACTGGCATCTATGAAAAAGCAAGATGAAGACAAAGATAAAAGAGATAAGGAAGAAAAAGAAAGCAGCAGAGAAAAAAGGGAGCGGT CTCGTAGCCCAAGAAGACGCAAATCCAGATCTCCTTCCCCTAGAAGACGATCTTCCCCTGTCAGGAGAGAGAGAAAGCGCAGTCATTCTC GATCTCCCCGTCACAGAACCAAGAGCCGGAGTCCTTCCCCTGCTCCAGAAAAGAAGGAAAAAACTCCAGAGCTCCCAGAACCTTCAGTGA AAGTAAAAGAACCTTCAGTACAAGAGGCTACTTCTACTAGTGACATTCTGAAAGTTCCCAAACCTGAACCTATACCAGAGCCTAAAGAAC CTTCTCCGGAAAAAAATTCCAAAAAAGAAAAGGAGAAGGAGAAGACCCGACCACGATCTCGGTCACGCTCCAAATCAAGATCCCGGACGC GGTCCCGCTCTCCTTCTCACACTCGACCTAGACGGCGCCATAGATCCCGATCAAGATCGTATTCACCTAGAAGGCGGCCAAGCCCAAGAA GGCGGCCATCTCCTCGAAGAAGAACTCCGCCAAGAAGAATGCCTCCTCCACCAAGGCATAGAAGGAGTAGATCTCCAGTAAGACGAAGAA GACGTTCGTCAGCATCCTTGTCTGGGAGTAGCTCATCATCCTCTTCATCTCGTTCACGGTCACCACCAAAGAAGCCTCCCAAGAGGACAT CCAGCCCCCCTCGGAAAACTCGTAGGTTATCTCCTTCAGCAAGTCCTCCAAGGCGAAGGCACAGGCCATCACCTCCTGCAACTCCACCAC CCAAAACTCGGCATTCCCCTACACCCCAGCAGTCAAACCGTACAAGAAAAAGTCGTGTTTCTGTGTCTCCAGGGAGAACTTCAGTGACAA AACATAAAGGTACTGAGAAAAGAGAATCCCCTTCACCAGCACCGAAGCCTAGAAAAGTAGAGTTATCTGAATCGGAAGAAGATAAAGGTG GCAAAATGGCTGCAGCAGATTCTGTGCAGCAGAGACGCCAATACAGACGACAAAACCAGCAGTCTTCATCTGACTCTGGCTCCTCCTCCT CCTCAGAAGATGAACGACCCAAGAGATCCCATGTGAAGAATGGTGAGGTTGGCAGGCGGCGGAGACATTCCCCTTCCCGGAGTGCTTCTC CATCACCACGAAAGCGCCAAAAAGAGACTTCCCCTCGGATGCAGATGGGAAAGCGATGGCAATCGCCAGTGACTAAAAGTGGTAGACGGA GGAGAAGTCCATCCCCACCACCCACCAGAAGGCGACGGTCTCCTTCTCCCGCCCCTCCTCCTCGACGGCGCAGGACTCCCACACCACCAC CACGACGAAGGACTCCTTCTCCTCCCCCACGTCGGCGCTCACCTTCTCCTAGAAGATACTCTCCTCCAATACAGAGGAGATACTCTCCTT CTCCACCTCCAAAGAGAAGAACGGCTTCACCTCCTCCCCCTCCTAAACGAAGAGCATCACCATCTCCACCACCAAAGCGGCGGGTCTCCC ATTCTCCACCTCCCAAACAAAGAAGCTCCCCAGTCACCAAGAGACGTTCACCTTCATTATCATCCAAGCATAGGAAAGGGTCTTCCCCAA GCCGCTCTACCCGGGAGGCCCGATCACCACAACCAAACAAACGGCATTCGCCCTCACCACGGCCTCGAGCTCCTCAGACCTCCTCAAGTC CTCCACCCGTTCGAAGAGGAGCGTCGTCATCACCCCAAAGAAGGCAGTCCCCGTCTCCAAGTACTAGGCCCATTAGGAGAGTCTCCAGGA CTCCGGAACCTAAAAAGATAAAAAAGGCTGCTTCCCCAAGCCCACAGTCTGTAAGAAGGGTCTCATCCTCCCGATCTGTCTCCGGGTCTC CTGAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCCGTCCAGTCTCAGTCACCGTCTACAAACTGGTCACCAGCTGTACCGGTCA AAAAGGCCAAAAGCCCAACACCGAGCCCATCACCGCCAAGAAATTCAGATCAGGAAGGAGGTGGAAAGAAAAAGAAGAAAAAGAAGGACA AGAAACACAAAAAGGATAAGAAGCACAAGAAGCACAAAAAACACAAGAAGGAAAAGGCTGTGGCTGCAGCTGCTGCAGCTGCTGTGACCC CTGCAGCCATTGCAGCTGCCACAACCACATTAGCACAGGAAGAGCCAGTGGCAGCGCCAGAGCCGAAGAAGGAGACTGAAAGTGAAGCTG AAGATAACCTTGATGATTTAGAAAAGCACCTGCGTGAAAAGGCCCTGAGATCAATGAGGAAGGCCCAAGTGTCCCCACAGTCTTAGGGGG AAATGTTTGTTATGATGTAAATTTTATTTGGTTTGTACGCAGTTCAATTTCAAAATTGCTAAAATGTGTTTGAGCTTTAGACTATAACAT TTGTTGTAATAATTGCTAGGTTGAAGTTCAACATGTAAAAAAAGGGGGCATGGATTTACATTGCAAAAGGTGTCCACAGTGTATTAGTGA CATTCTTTCATTGACAGCTGACATAATTCATTGAGTGAAATATTTTAAGCCAAAAAAAAATTCCCTTTTTAAAAAAGGGGGTTTAAATAC TGTTGGCATTTTTATGGTTCCTTTAAATGCCCTAGCTATTCCCAGAGGGGTTTTTTTGTTTGTTTTTTTGGTTTTGATTTTCTTTTTGTT >In-frame_ENST00000525297_ENST00000447431_TCGA-KK-A6E1_FAU_chr11_64888453_-_SRRM1_chr1_24975350_length(amino acids)=895AA_start in transcript=8_stop in transcript=2695 MQLFVRAQELHTFEVTGQETVAQIKALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLS AQENIAGIPSAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSP RHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSR SPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSP PRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKM AAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRMQMGKRWQSPVTKSGRRRRS PSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSP PPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPE PKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGGKKKKKKKDKKH -------------------------------------------------------------- >In-frame_ENST00000525297_ENST00000374389_TCGA-KK-A6E1_FAU_chr11_64888453_-_SRRM1_chr1_24975350_length(transcript)=3027nt_BP=179nt TCGCCAATATGCAGCTCTTTGTCCGCGCCCAGGAGCTACACACCTTCGAGGTGACCGGCCAGGAAACGGTCGCCCAGATCAAGGCCCTGA CTACCCTGGAAGTAGCAGGCCGCATGCTTGGAGGTAAAGTCCATGGTTCCCTGGCCCGTGCTGGAAAAGTGAGAGGTCAGACTCCTAAGA ATCCAGACTCCAAAATGATGCAAATCAACCTGACTGGATTTTTGAATGGAAAAAATGCTCGAGAATTTATGGGAGAACTGTGGCCCCTGC TGCTAAGTGCACAAGAAAACATCGCGGGAATCCCTTCTGCTTTCCTAGAACTGAAGAAAGAAGAAATAAAACAAAGACAGATTGAACAAG AAAAACTGGCATCTATGAAAAAGCAAGATGAAGACAAAGATAAAAGAGATAAGGAAGAAAAAGAAAGCAGCAGAGAAAAAAGGGAGCGGT CTCGTAGCCCAAGAAGACGCAAATCCAGATCTCCTTCCCCTAGAAGACGATCTTCCCCTGTCAGGAGAGAGAGAAAGCGCAGTCATTCTC GATCTCCCCGTCACAGAACCAAGAGCCGGAGTCCTTCCCCTGCTCCAGAAAAGAAGGAAAAAACTCCAGAGCTCCCAGAACCTTCAGTGA AAGTAAAAGAACCTTCAGTACAAGAGGCTACTTCTACTAGTGACATTCTGAAAGTTCCCAAACCTGAACCTATACCAGAGCCTAAAGAAC CTTCTCCGGAAAAAAATTCCAAAAAAGAAAAGGAGAAGGAGAAGACCCGACCACGATCTCGGTCACGCTCCAAATCAAGATCCCGGACGC GGTCCCGCTCTCCTTCTCACACTCGACCTAGACGGCGCCATAGATCCCGATCAAGAAGGCGGCCAAGCCCAAGAAGGCGGCCATCTCCTC GAAGAAGAACTCCGCCAAGAAGAATGCCTCCTCCACCAAGGCATAGAAGGAGTAGATCTCCAGTAAGACGAAGAAGACGTTCGTCAGCAT CCTTGTCTGGGAGTAGCTCATCATCCTCTTCATCTCGTTCACGGTCACCACCAAAGAAGCCTCCCAAGAGGACATCCAGCCCCCCTCGGA AAACTCGTAGGTTATCTCCTTCAGCAAGTCCTCCAAGGCGAAGGCACAGGCCATCACCTCCTGCAACTCCACCACCCAAAACTCGGCATT CCCCTACACCCCAGCAGTCAAACCGTACAAGAAAAAGTCGTGTTTCTGTGTCTCCAGGGAGAACTTCAGGTAAAGTGACAAAACATAAAG GTACTGAGAAAAGAGAATCCCCTTCACCAGCACCGAAGCCTAGAAAAGTAGAGTTATCTGAATCGGAAGAAGATAAAGGTGGCAAAATGG CTGCAGCAGATTCTGTGCAGCAGAGACGCCAATACAGACGACAAAACCAGCAGTCTTCATCTGACTCTGGCTCCTCCTCCTCCTCAGAAG ATGAACGACCCAAGAGATCCCATGTGAAGAATGGTGAGGTTGGCAGGCGGCGGAGACATTCCCCTTCCCGGAGTGCTTCTCCATCACCAC GAAAGCGCCAAAAAGAGACTTCCCCTCGGATGCAGATGGGAAAGCGATGGCAATCGCCAGTGACTAAAAGTGGTAGACGGAGGAGAAGTC CATCCCCACCACCCACCAGAAGGCGACGGTCTCCTTCTCCCGCCCCTCCTCCTCGACGGCGCAGGACTCCCACACCACCACCACGACGAA GGACTCCTTCTCCTCCCCCACGTCGGCGCTCACCTTCTCCTAGAAGATACTCTCCTCCAATACAGAGGAGATACTCTCCTTCTCCACCTC CAAAGAGAAGAACGGCTTCACCTCCTCCCCCTCCTAAACGAAGAGCATCACCATCTCCACCACCAAAGCGGCGGGTCTCCCATTCTCCAC CTCCCAAACAAAGAAGCTCCCCAGTCACCAAGAGACGTTCACCTTCATTATCATCCAAGCATAGGAAAGGGTCTTCCCCAAGCCGCTCTA CCCGGGAGGCCCGATCACCACAACCAAACAAACGGCATTCGCCCTCACCACGGCCTCGAGCTCCTCAGACCTCCTCAAGTCCTCCACCCG TTCGAAGAGGAGCGTCGTCATCACCCCAAAGAAGGCAGTCCCCGTCTCCAAGTACTAGGCCCATTAGGAGAGTCTCCAGGACTCCGGAAC CTAAAAAGATAAAAAAGGCTGCTTCCCCAAGCCCACAGTCTGTAAGAAGGGTCTCATCCTCCCGATCTGTCTCCGGGTCTCCTGAGCCAG CAGCTAAAAAGCCCCCAGCACCTCCATCCCCCGTCCAGTCTCAGTCACCGTCTACAAACTGGTCACCAGCTGTACCGGTCAAAAAGGCCA AAAGCCCAACACCGAGCCCATCACCGCCAAGAAATTCAGATCAGGAAGGAGGTGGAAAGAAAAAGAAGAAAAAGAAGGACAAGAAACACA AAAAGGATAAGAAGCACAAGAAGCACAAAAAACACAAGAAGGAAAAGGCTGTGGCTGCAGCTGCTGCAGCTGCTGTGACCCCTGCAGCCA TTGCAGCTGCCACAACCACATTAGCACAGGAAGAGCCAGTGGCAGCGCCAGAGCCGAAGAAGGAGACTGAAAGTGAAGCTGAAGATAACC TTGATGATTTAGAAAAGCACCTGCGTGAAAAGGCCCTGAGATCAATGAGGAAGGCCCAAGTGTCCCCACAGTCTTAGGGGGAAATGTTTG TTATGATGTAAATTTTATTTGGTTTGTACGCAGTTCAATTTCAAAATTGCTAAAATGTGTTTGAGCTTTAGACTATAACATTTGTTGTAA TAATTGCTAGGTTGAAGTTCAACATGTAAAAAAAGGGGGCATGGATTTACATTGCAAAAGGTGTCCACAGTGTATTAGTGACATTCTTTC ATTGACAGCTGACATAATTCATTGAGTGAAATATTTTAAGCCAAAAAAAAATTCCCTTTTTAAAAAAGGGGGTTTAAATACTGTTGGCAT >In-frame_ENST00000525297_ENST00000374389_TCGA-KK-A6E1_FAU_chr11_64888453_-_SRRM1_chr1_24975350_length(amino acids)=892AA_start in transcript=8_stop in transcript=2686 MQLFVRAQELHTFEVTGQETVAQIKALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLS AQENIAGIPSAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSP RHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSR SPSHTRPRRRHRSRSRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTR RLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAA DSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRMQMGKRWQSPVTKSGRRRRSPSP PPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPK QRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKK IKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGGKKKKKKKDKKHKKD -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for FAU-SRRM1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for FAU-SRRM1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for FAU-SRRM1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |