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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:FLNA-TIMM23 (FusionGDB2 ID:30555) |
Fusion Gene Summary for FLNA-TIMM23 |
Fusion gene summary |
Fusion gene information | Fusion gene name: FLNA-TIMM23 | Fusion gene ID: 30555 | Hgene | Tgene | Gene symbol | FLNA | TIMM23 | Gene ID | 2316 | 100287932 |
Gene name | filamin A | translocase of inner mitochondrial membrane 23 | |
Synonyms | ABP-280|ABPX|CSBS|CVD1|FGS2|FLN|FLN-A|FLN1|FMD|MNS|NHBP|OPD|OPD1|OPD2|XLVD|XMVD | TIM23 | |
Cytomap | Xq28 | 10q11.22 | |
Type of gene | protein-coding | protein-coding | |
Description | filamin-Aactin binding protein 280alpha-filaminendothelial actin-binding proteinepididymis secretory sperm binding proteinfilamin A, alphafilamin-1non-muscle filamin | mitochondrial import inner membrane translocase subunit Tim23translocase of inner mitochondrial membrane 23 homologtranslocase of the inner mitochondrial membrane | |
Modification date | 20200313 | 20200329 | |
UniProtAcc | P21333 | . | |
Ensembl transtripts involved in fusion gene | ENST00000360319, ENST00000422373, ENST00000369850, ENST00000369856, ENST00000344736, ENST00000498491, | ENST00000260867, ENST00000485812, ENST00000374064, ENST00000374065, | |
Fusion gene scores | * DoF score | 24 X 29 X 9=6264 | 6 X 4 X 5=120 |
# samples | 34 | 6 | |
** MAII score | log2(34/6264*10)=-4.20347756115334 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(6/120*10)=-1 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: FLNA [Title/Abstract] AND TIMM23 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | FLNA(153582519)-TIMM23(51612988), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | FLNA | GO:0016479 | negative regulation of transcription by RNA polymerase I | 22307607 |
Hgene | FLNA | GO:0030334 | regulation of cell migration | 16291724 |
Hgene | FLNA | GO:0031532 | actin cytoskeleton reorganization | 10051605 |
Hgene | FLNA | GO:0034394 | protein localization to cell surface | 18322202 |
Hgene | FLNA | GO:0043113 | receptor clustering | 10692483 |
Hgene | FLNA | GO:0043433 | negative regulation of DNA-binding transcription factor activity | 15684392 |
Hgene | FLNA | GO:0044319 | wound healing, spreading of cells | 16291724 |
Hgene | FLNA | GO:0045184 | establishment of protein localization | 18322202 |
Hgene | FLNA | GO:0051764 | actin crosslink formation | 10051605 |
Hgene | FLNA | GO:0072659 | protein localization to plasma membrane | 24951510 |
Hgene | FLNA | GO:0090307 | mitotic spindle assembly | 18548008 |
Hgene | FLNA | GO:1901381 | positive regulation of potassium ion transmembrane transport | 24951510 |
Fusion gene breakpoints across FLNA (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across TIMM23 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | STAD | TCGA-BR-8365-01A | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - |
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Fusion Gene ORF analysis for FLNA-TIMM23 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000360319 | ENST00000260867 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - |
5CDS-intron | ENST00000360319 | ENST00000485812 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - |
5CDS-intron | ENST00000360319 | ENST00000374064 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - |
5CDS-intron | ENST00000360319 | ENST00000374065 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - |
In-frame | ENST00000422373 | ENST00000260867 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - |
5CDS-intron | ENST00000422373 | ENST00000485812 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - |
5CDS-intron | ENST00000422373 | ENST00000374064 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - |
5CDS-intron | ENST00000422373 | ENST00000374065 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - |
In-frame | ENST00000369850 | ENST00000260867 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - |
5CDS-intron | ENST00000369850 | ENST00000485812 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - |
5CDS-intron | ENST00000369850 | ENST00000374064 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - |
5CDS-intron | ENST00000369850 | ENST00000374065 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - |
In-frame | ENST00000369856 | ENST00000260867 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - |
5CDS-intron | ENST00000369856 | ENST00000485812 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - |
5CDS-intron | ENST00000369856 | ENST00000374064 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - |
5CDS-intron | ENST00000369856 | ENST00000374065 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - |
In-frame | ENST00000344736 | ENST00000260867 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - |
5CDS-intron | ENST00000344736 | ENST00000485812 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - |
5CDS-intron | ENST00000344736 | ENST00000374064 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - |
5CDS-intron | ENST00000344736 | ENST00000374065 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - |
intron-3CDS | ENST00000498491 | ENST00000260867 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - |
intron-intron | ENST00000498491 | ENST00000485812 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - |
intron-intron | ENST00000498491 | ENST00000374064 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - |
intron-intron | ENST00000498491 | ENST00000374065 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000360319 | FLNA | chrX | 153582519 | - | ENST00000260867 | TIMM23 | chr10 | 51612988 | - | 6366 | 5571 | 2 | 5941 | 1979 |
ENST00000422373 | FLNA | chrX | 153582519 | - | ENST00000260867 | TIMM23 | chr10 | 51612988 | - | 6577 | 5782 | 213 | 6152 | 1979 |
ENST00000369850 | FLNA | chrX | 153582519 | - | ENST00000260867 | TIMM23 | chr10 | 51612988 | - | 6589 | 5794 | 201 | 6164 | 1987 |
ENST00000369856 | FLNA | chrX | 153582519 | - | ENST00000260867 | TIMM23 | chr10 | 51612988 | - | 1612 | 817 | 18 | 1187 | 389 |
ENST00000344736 | FLNA | chrX | 153582519 | - | ENST00000260867 | TIMM23 | chr10 | 51612988 | - | 6275 | 5480 | 7 | 5850 | 1947 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000360319 | ENST00000260867 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - | 0.000807321 | 0.99919266 |
ENST00000422373 | ENST00000260867 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - | 0.000951772 | 0.9990482 |
ENST00000369850 | ENST00000260867 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - | 0.001192597 | 0.99880743 |
ENST00000369856 | ENST00000260867 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - | 0.006390746 | 0.9936093 |
ENST00000344736 | ENST00000260867 | FLNA | chrX | 153582519 | - | TIMM23 | chr10 | 51612988 | - | 0.001588379 | 0.99841166 |
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Fusion Genomic Features for FLNA-TIMM23 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for FLNA-TIMM23 |
Go to FGviewer for the breakpoints of chrX:153582519-chr10:51612988 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
FLNA | . |
FUNCTION: Promotes orthogonal branching of actin filaments and links actin filaments to membrane glycoproteins. Anchors various transmembrane proteins to the actin cytoskeleton and serves as a scaffold for a wide range of cytoplasmic signaling proteins. Interaction with FLNB may allow neuroblast migration from the ventricular zone into the cortical plate. Tethers cell surface-localized furin, modulates its rate of internalization and directs its intracellular trafficking (By similarity). Involved in ciliogenesis. Plays a role in cell-cell contacts and adherens junctions during the development of blood vessels, heart and brain organs. Plays a role in platelets morphology through interaction with SYK that regulates ITAM- and ITAM-like-containing receptor signaling, resulting in by platelet cytoskeleton organization maintenance (By similarity). During the axon guidance process, required for growth cone collapse induced by SEMA3A-mediated stimulation of neurons (PubMed:25358863). {ECO:0000250, ECO:0000250|UniProtKB:Q8BTM8, ECO:0000269|PubMed:22121117, ECO:0000269|PubMed:25358863}. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 166_269 | 1844.3333333333333 | 2640.0 | Domain | Calponin-homology (CH) 2 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 43_149 | 1844.3333333333333 | 2640.0 | Domain | Calponin-homology (CH) 1 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 166_269 | 1852.3333333333333 | 2648.0 | Domain | Calponin-homology (CH) 2 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 43_149 | 1852.3333333333333 | 2648.0 | Domain | Calponin-homology (CH) 1 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 166_269 | 1844.3333333333333 | 2640.0 | Domain | Calponin-homology (CH) 2 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 43_149 | 1844.3333333333333 | 2640.0 | Domain | Calponin-homology (CH) 1 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 1741_1778 | 1844.3333333333333 | 2640.0 | Region | Note=Hinge 1 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 2_274 | 1844.3333333333333 | 2640.0 | Region | Note=Actin-binding |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 1741_1778 | 1852.3333333333333 | 2648.0 | Region | Note=Hinge 1 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 2_274 | 1852.3333333333333 | 2648.0 | Region | Note=Actin-binding |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 1741_1778 | 1844.3333333333333 | 2640.0 | Region | Note=Hinge 1 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 2_274 | 1844.3333333333333 | 2640.0 | Region | Note=Actin-binding |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 1062_1154 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 9 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 1155_1249 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 10 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 1250_1349 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 11 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 1350_1442 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 12 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 1443_1539 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 13 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 1540_1636 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 14 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 1649_1740 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 15 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 276_374 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 1 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 376_474 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 2 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 475_570 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 3 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 571_663 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 4 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 667_763 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 5 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 764_866 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 6 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 867_965 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 7 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 966_1061 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 8 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 1062_1154 | 1852.3333333333333 | 2648.0 | Repeat | Note=Filamin 9 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 1155_1249 | 1852.3333333333333 | 2648.0 | Repeat | Note=Filamin 10 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 1250_1349 | 1852.3333333333333 | 2648.0 | Repeat | Note=Filamin 11 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 1350_1442 | 1852.3333333333333 | 2648.0 | Repeat | Note=Filamin 12 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 1443_1539 | 1852.3333333333333 | 2648.0 | Repeat | Note=Filamin 13 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 1540_1636 | 1852.3333333333333 | 2648.0 | Repeat | Note=Filamin 14 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 1649_1740 | 1852.3333333333333 | 2648.0 | Repeat | Note=Filamin 15 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 276_374 | 1852.3333333333333 | 2648.0 | Repeat | Note=Filamin 1 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 376_474 | 1852.3333333333333 | 2648.0 | Repeat | Note=Filamin 2 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 475_570 | 1852.3333333333333 | 2648.0 | Repeat | Note=Filamin 3 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 571_663 | 1852.3333333333333 | 2648.0 | Repeat | Note=Filamin 4 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 667_763 | 1852.3333333333333 | 2648.0 | Repeat | Note=Filamin 5 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 764_866 | 1852.3333333333333 | 2648.0 | Repeat | Note=Filamin 6 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 867_965 | 1852.3333333333333 | 2648.0 | Repeat | Note=Filamin 7 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 966_1061 | 1852.3333333333333 | 2648.0 | Repeat | Note=Filamin 8 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 1062_1154 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 9 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 1155_1249 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 10 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 1250_1349 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 11 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 1350_1442 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 12 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 1443_1539 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 13 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 1540_1636 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 14 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 1649_1740 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 15 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 276_374 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 1 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 376_474 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 2 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 475_570 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 3 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 571_663 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 4 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 667_763 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 5 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 764_866 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 6 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 867_965 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 7 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 966_1061 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 8 |
Tgene | TIMM23 | chrX:153582519 | chr10:51612988 | ENST00000260867 | 2 | 7 | 125_145 | 86.33333333333333 | 210.0 | Transmembrane | Helical | |
Tgene | TIMM23 | chrX:153582519 | chr10:51612988 | ENST00000260867 | 2 | 7 | 181_197 | 86.33333333333333 | 210.0 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 2517_2551 | 1844.3333333333333 | 2640.0 | Region | Note=Hinge 2 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 2517_2647 | 1844.3333333333333 | 2640.0 | Region | Note=Self-association site%2C tail |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 2517_2551 | 1852.3333333333333 | 2648.0 | Region | Note=Hinge 2 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 2517_2647 | 1852.3333333333333 | 2648.0 | Region | Note=Self-association site%2C tail |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 2517_2551 | 1844.3333333333333 | 2640.0 | Region | Note=Hinge 2 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 2517_2647 | 1844.3333333333333 | 2640.0 | Region | Note=Self-association site%2C tail |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 1779_1860 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 16 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 1861_1950 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 17 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 1951_2039 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 18 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 2042_2131 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 19 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 2132_2230 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 20 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 2233_2325 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 21 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 2327_2420 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 22 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 2424_2516 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 23 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 2552_2646 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 24 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 1779_1860 | 1852.3333333333333 | 2648.0 | Repeat | Note=Filamin 16 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 1861_1950 | 1852.3333333333333 | 2648.0 | Repeat | Note=Filamin 17 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 1951_2039 | 1852.3333333333333 | 2648.0 | Repeat | Note=Filamin 18 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 2042_2131 | 1852.3333333333333 | 2648.0 | Repeat | Note=Filamin 19 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 2132_2230 | 1852.3333333333333 | 2648.0 | Repeat | Note=Filamin 20 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 2233_2325 | 1852.3333333333333 | 2648.0 | Repeat | Note=Filamin 21 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 2327_2420 | 1852.3333333333333 | 2648.0 | Repeat | Note=Filamin 22 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 2424_2516 | 1852.3333333333333 | 2648.0 | Repeat | Note=Filamin 23 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 2552_2646 | 1852.3333333333333 | 2648.0 | Repeat | Note=Filamin 24 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 1779_1860 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 16 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 1861_1950 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 17 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 1951_2039 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 18 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 2042_2131 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 19 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 2132_2230 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 20 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 2233_2325 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 21 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 2327_2420 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 22 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 2424_2516 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 23 |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 2552_2646 | 1844.3333333333333 | 2640.0 | Repeat | Note=Filamin 24 |
Tgene | TIMM23 | chrX:153582519 | chr10:51612988 | ENST00000260867 | 2 | 7 | 73_93 | 86.33333333333333 | 210.0 | Transmembrane | Helical |
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Fusion Gene Sequence for FLNA-TIMM23 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000360319_ENST00000260867_TCGA-BR-8365-01A_FLNA_chrX_153582519_-_TIMM23_chr10_51612988_length(transcript)=6366nt_BP=5571nt GGCTGCAGCACCGCCCCCCCGGCTTCTCGCGCCTCAAAATGAGTAGCTCCCACTCTCGGGCGGGCCAGAGCGCAGCAGGCGCGGCTCCGG GCGGCGGCGTCGACACGCGGGACGCCGAGATGCCGGCCACCGAGAAGGACCTGGCGGAGGACGCGCCGTGGAAGAAGATCCAGCAGAACA CTTTCACGCGCTGGTGCAACGAGCACCTGAAGTGCGTGAGCAAGCGCATCGCCAACCTGCAGACGGACCTGAGCGACGGGCTGCGGCTTA TCGCGCTGTTGGAGGTGCTCAGCCAGAAGAAGATGCACCGCAAGCACAACCAGCGGCCCACTTTCCGCCAAATGCAGCTTGAGAACGTGT CGGTGGCGCTCGAGTTCCTGGACCGCGAGAGCATCAAACTGGTGTCCATCGACAGCAAGGCCATCGTGGACGGGAACCTGAAGCTGATCC TGGGCCTCATCTGGACCCTGATCCTGCACTACTCCATCTCCATGCCCATGTGGGACGAGGAGGAGGATGAGGAGGCCAAGAAGCAGACCC CCAAGCAGAGGCTCCTGGGCTGGATCCAGAACAAGCTGCCGCAGCTGCCCATCACCAACTTCAGCCGGGACTGGCAGAGCGGCCGGGCCC TGGGCGCCCTGGTGGACAGCTGTGCCCCGGGCCTGTGTCCTGACTGGGACTCTTGGGACGCCAGCAAGCCCGTTACCAATGCGCGAGAGG CCATGCAGCAGGCGGATGACTGGCTGGGCATCCCCCAGGTGATCACCCCCGAGGAGATTGTGGACCCCAACGTGGACGAGCACTCTGTCA TGACCTACCTGTCCCAGTTCCCCAAGGCCAAGCTGAAGCCAGGGGCTCCCTTGCGGCCCAAACTGAACCCGAAGAAAGCCCGTGCCTACG GGCCAGGCATCGAGCCCACAGGCAACATGGTGAAGAAGCGGGCAGAGTTCACTGTGGAGACCAGAAGTGCTGGCCAGGGAGAGGTGCTGG TGTACGTGGAGGACCCGGCCGGACACCAGGAGGAGGCAAAAGTGACCGCCAATAACGACAAGAACCGCACCTTCTCCGTCTGGTACGTCC CCGAGGTGACGGGGACTCATAAGGTTACTGTGCTCTTTGCTGGCCAGCACATCGCCAAGAGCCCCTTCGAGGTGTACGTGGATAAGTCAC AGGGTGACGCCAGCAAAGTGACAGCCCAAGGTCCCGGCCTGGAGCCCAGTGGCAACATCGCCAACAAGACCACCTACTTTGAGATCTTTA CGGCAGGAGCTGGCACGGGCGAGGTCGAGGTTGTGATCCAGGACCCCATGGGACAGAAGGGCACGGTAGAGCCTCAGCTGGAGGCCCGGG GCGACAGCACATACCGCTGCAGCTACCAGCCCACCATGGAGGGCGTCCACACCGTGCACGTCACGTTTGCCGGCGTGCCCATCCCTCGCA GCCCCTACACTGTCACTGTTGGCCAAGCCTGTAACCCGAGTGCCTGCCGGGCGGTTGGCCGGGGCCTCCAGCCCAAGGGTGTGCGGGTGA AGGAGACAGCTGACTTCAAGGTGTACACAAAGGGCGCTGGCAGTGGGGAGCTGAAGGTCACCGTGAAGGGCCCCAAGGGAGAGGAGCGCG TGAAGCAGAAGGACCTGGGGGATGGCGTGTATGGCTTCGAGTATTACCCCATGGTCCCTGGAACCTATATCGTCACCATCACGTGGGGTG GTCAGAACATCGGGCGCAGTCCCTTCGAAGTGAAGGTGGGCACCGAGTGTGGCAATCAGAAGGTACGGGCCTGGGGCCCTGGGCTGGAGG GCGGCGTCGTTGGCAAGTCAGCAGACTTTGTGGTGGAGGCTATCGGGGACGACGTGGGCACGCTGGGCTTCTCGGTGGAAGGGCCATCGC AGGCTAAGATCGAATGTGACGACAAGGGCGACGGCTCCTGTGATGTGCGCTACTGGCCGCAGGAGGCTGGCGAGTATGCCGTTCACGTGC TGTGCAACAGCGAAGACATCCGCCTCAGCCCCTTCATGGCTGACATCCGTGACGCGCCCCAGGACTTCCACCCAGACAGGGTGAAGGCAC GTGGGCCTGGATTGGAGAAGACAGGTGTGGCCGTCAACAAGCCAGCAGAGTTCACAGTGGATGCCAAGCACGGTGGCAAGGCCCCACTTC GGGTCCAAGTCCAGGACAATGAAGGCTGCCCTGTGGAGGCGTTGGTCAAGGACAACGGCAATGGCACTTACAGCTGCTCCTACGTGCCCA GGAAGCCGGTGAAGCACACAGCCATGGTGTCCTGGGGAGGCGTCAGCATCCCCAACAGCCCCTTCAGGGTGAATGTGGGAGCTGGCAGCC ACCCCAACAAGGTCAAAGTATACGGCCCCGGAGTAGCCAAGACAGGGCTCAAGGCCCACGAGCCCACCTACTTCACTGTGGACTGCGCCG AGGCTGGCCAGGGGGACGTCAGCATCGGCATCAAGTGTGCCCCTGGAGTGGTAGGCCCCGCCGAAGCTGACATCGACTTCGACATCATCC GCAATGACAATGACACCTTCACGGTCAAGTACACGCCCCGGGGGGCTGGCAGCTACACCATTATGGTCCTCTTTGCTGACCAGGCCACGC CCACCAGCCCCATCCGAGTCAAGGTGGAGCCCTCTCATGACGCCAGTAAGGTGAAGGCCGAGGGCCCTGGCCTCAGTCGCACTGGTGTCG AGCTTGGCAAGCCCACCCACTTCACAGTAAATGCCAAAGCTGCTGGCAAAGGCAAGCTGGACGTCCAGTTCTCAGGACTCACCAAGGGGG ATGCAGTGCGAGATGTGGACATCATCGACCACCATGACAACACCTACACAGTCAAGTACACGCCTGTCCAGCAGGGTCCAGTAGGCGTCA ATGTCACTTATGGAGGGGATCCCATCCCTAAGAGCCCTTTCTCAGTGGCAGTATCTCCAAGCCTGGACCTCAGCAAGATCAAGGTGTCTG GCCTGGGAGAGAAGGTGGACGTTGGCAAAGACCAGGAGTTCACAGTCAAATCAAAGGGTGCTGGTGGTCAAGGCAAAGTGGCATCCAAGA TTGTGGGCCCCTCGGGTGCAGCGGTGCCCTGCAAGGTGGAGCCAGGCCTGGGGGCTGACAACAGTGTGGTGCGCTTCCTGCCCCGTGAGG AAGGGCCCTATGAGGTGGAGGTGACCTATGACGGCGTGCCCGTGCCTGGCAGCCCCTTTCCTCTGGAAGCTGTGGCCCCCACCAAGCCTA GCAAGGTGAAGGCGTTTGGGCCGGGGCTGCAGGGAGGCAGTGCGGGCTCCCCCGCCCGCTTCACCATCGACACCAAGGGCGCCGGCACAG GTGGCCTGGGCCTGACGGTGGAGGGCCCCTGTGAGGCGCAGCTCGAGTGCTTGGACAATGGGGATGGCACATGTTCCGTGTCCTACGTGC CCACCGAGCCCGGGGACTACAACATCAACATCCTCTTCGCTGACACCCACATCCCTGGCTCCCCATTCAAGGCCCACGTGGTTCCCTGCT TTGACGCATCCAAAGTCAAGTGCTCAGGCCCCGGGCTGGAGCGGGCCACCGCTGGGGAGGTGGGCCAATTCCAAGTGGACTGCTCGAGCG CGGGCAGCGCGGAGCTGACCATTGAGATCTGCTCGGAGGCGGGGCTTCCGGCCGAGGTGTACATCCAGGACCACGGTGATGGCACGCACA CCATTACCTACATTCCCCTCTGCCCCGGGGCCTACACCGTCACCATCAAGTACGGCGGCCAGCCCGTGCCCAACTTCCCCAGCAAGCTGC AGGTGGAACCTGCGGTGGACACTTCCGGTGTCCAGTGCTATGGGCCTGGTATTGAGGGCCAGGGTGTCTTCCGTGAGGCCACCACTGAGT TCAGTGTGGACGCCCGGGCTCTGACACAGACCGGAGGGCCGCACGTCAAGGCCCGTGTGGCCAACCCCTCAGGCAACCTGACGGAGACCT ACGTTCAGGACCGTGGCGATGGCATGTACAAAGTGGAGTACACGCCTTACGAGGAGGGACTGCACTCCGTGGACGTGACCTATGACGGCA GTCCCGTGCCCAGCAGCCCCTTCCAGGTGCCCGTGACCGAGGGCTGCGACCCCTCCCGGGTGCGTGTCCACGGGCCAGGCATCCAAAGTG GCACCACCAACAAGCCCAACAAGTTCACTGTGGAGACCAGGGGAGCTGGCACGGGCGGCCTGGGCCTGGCTGTAGAGGGCCCCTCCGAGG CCAAGATGTCCTGCATGGATAACAAGGACGGCAGCTGCTCGGTCGAGTACATCCCTTATGAGGCTGGCACCTACAGCCTCAACGTCACCT ATGGTGGCCATCAAGTGCCAGGCAGTCCTTTCAAGGTCCCTGTGCATGATGTGACAGATGCGTCCAAGGTCAAGTGCTCTGGGCCCGGCC TGAGCCCAGGCATGGTTCGTGCCAACCTCCCTCAGTCCTTCCAGGTGGACACAAGCAAGGCTGGTGTGGCCCCATTGCAGGTCAAAGTGC AAGGGCCCAAAGGCCTGGTGGAGCCAGTGGACGTGGTAGACAACGCTGATGGCACCCAGACCGTCAATTATGTGCCCAGCCGAGAAGGGC CCTACAGCATCTCAGTACTGTATGGAGATGAAGAGGTACCCCGGAGCCCCTTCAAGGTCAAGGTGCTGCCTACTCATGATGCCAGCAAGG TGAAGGCCAGTGGCCCCGGGCTCAACACCACTGGCGTGCCTGCCAGCCTGCCCGTGGAGTTCACCATCGATGCAAAGGACGCCGGGGAGG GCCTGCTGGCTGTCCAGATCACGGATCCCGAAGGCAAGCCGAAGAAGACACACATCCAAGACAACCATGACGGCACGTATACAGTGGCCT ACGTGCCAGACGTGACAGGTCGCTACACCATCCTCATCAAGTACGGTGGTGACGAGATCCCCTTCTCCCCGTACCGCGTGCGTGCCGTGC CCACCGGGGACGCCAGCAAGTGCACTGTCACAGGTGCTGGCATCGGCCCCACCATTCAGATTGGGGAGGAGACGGTGATCACTGTGGACA CTAAGGCGGCAGGCAAAGGCAAAGTGACGTGCACCGTGTGCACGCCTGATGGCTCAGAGGTGGATGTGGACGTGGTGGAGAATGAGGACG GCACTTTCGACATCTTCTACACGGCCCCCCAGCCGGGCAAATACGTCATCTGTGTGCGCTTTGGTGGCGAGCACGTGCCCAACAGCCCCT TCCAAGTGACGGCTCTGGCTGGGGACCAGCCCTCGGTGCAGCCCCCTCTACGGTCTCAGCAGCTGGCCCCACAGTACACCTACGCCCAGG GCGGCCAGCAGACTTGGGCCCCGGAGAGGCCCCTGGTGGGTGTCAATGGGCTGGATGTGACCAGCCTGAGGCCCTTTGACCTTGTCATCC CCTTCACCATCAAGAAGGGCGAGATCACAGGGGAGGTTCGGATGCCCTCAGGCAAGGTGGCGCAGCCCACCATCACTGACAACAAAGACG GCACCGTGACCGTGCGGTATGCACCCAGCGAGGCTGGCCTGCACGAGATGGACATCCGCTATGACAACATGCACATCCCAGGGGCTGCGT TTGGTGCAATGAATGGTCTTCGGCTAGGATTGAAGGAAACCCAGAACATGGCCTGGTCCAAACCAAGAAATGTACAGATTTTGAATATGG TGACTAGGCAAGGGGCACTTTGGGCTAATACTCTAGGTTCTCTGGCTTTGCTCTATAGTGCATTTGGTGTCATCATTGAGAAAACACGAG GTGCAGAAGATGACCTTAACACAGTAGCAGCTGGAACCATGACAGGCATGTTGTATAAATGTACAGGTGGTCTTCGAGGGATAGCACGAG GTGGTCTGACAGGACTAACACTTACCAGCCTCTATGCACTATATAATAACTGGGAGCACATGAAAGGCTCCTTGCTCCAACAGTCACTCT GAAGATTTTGCCAACTCATGAATGGAGGACACTTCAGTAGTCATCTAGATCCTTTTATAAGACAGTTTGGAGTTATTCTCTCTCTTCTAC CTACAATTAGTTTGAAAAATTGGAGATTTTGATTTGCTGTGATGAAAATCCTGGATGGCTGACCAAGACTGGCACTTGTTCCAGCCATTA GTGAGTTGAAGCCAAAGCCCTTTGGTGACTCACTGAGTACCATGGTTCTGTTCTCCTCTGGAGATCTTGCACGTATCTGTTTTCCTCCCC CATGAACTAGAAAACCACTTACTCCCAGAATTCAGGTCGTGCTTGTTAGTACTATATCACCAAGTCCATTCATTTAATGATCCAAAACTG >In-frame_ENST00000360319_ENST00000260867_TCGA-BR-8365-01A_FLNA_chrX_153582519_-_TIMM23_chr10_51612988_length(amino acids)=1979AA_start in transcript=2_stop in transcript=5941 LQHRPPGFSRLKMSSSHSRAGQSAAGAAPGGGVDTRDAEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLI ALLEVLSQKKMHRKHNQRPTFRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDEEEDEEAKKQTP KQRLLGWIQNKLPQLPITNFSRDWQSGRALGALVDSCAPGLCPDWDSWDASKPVTNAREAMQQADDWLGIPQVITPEEIVDPNVDEHSVM TYLSQFPKAKLKPGAPLRPKLNPKKARAYGPGIEPTGNMVKKRAEFTVETRSAGQGEVLVYVEDPAGHQEEAKVTANNDKNRTFSVWYVP EVTGTHKVTVLFAGQHIAKSPFEVYVDKSQGDASKVTAQGPGLEPSGNIANKTTYFEIFTAGAGTGEVEVVIQDPMGQKGTVEPQLEARG DSTYRCSYQPTMEGVHTVHVTFAGVPIPRSPYTVTVGQACNPSACRAVGRGLQPKGVRVKETADFKVYTKGAGSGELKVTVKGPKGEERV KQKDLGDGVYGFEYYPMVPGTYIVTITWGGQNIGRSPFEVKVGTECGNQKVRAWGPGLEGGVVGKSADFVVEAIGDDVGTLGFSVEGPSQ AKIECDDKGDGSCDVRYWPQEAGEYAVHVLCNSEDIRLSPFMADIRDAPQDFHPDRVKARGPGLEKTGVAVNKPAEFTVDAKHGGKAPLR VQVQDNEGCPVEALVKDNGNGTYSCSYVPRKPVKHTAMVSWGGVSIPNSPFRVNVGAGSHPNKVKVYGPGVAKTGLKAHEPTYFTVDCAE AGQGDVSIGIKCAPGVVGPAEADIDFDIIRNDNDTFTVKYTPRGAGSYTIMVLFADQATPTSPIRVKVEPSHDASKVKAEGPGLSRTGVE LGKPTHFTVNAKAAGKGKLDVQFSGLTKGDAVRDVDIIDHHDNTYTVKYTPVQQGPVGVNVTYGGDPIPKSPFSVAVSPSLDLSKIKVSG LGEKVDVGKDQEFTVKSKGAGGQGKVASKIVGPSGAAVPCKVEPGLGADNSVVRFLPREEGPYEVEVTYDGVPVPGSPFPLEAVAPTKPS KVKAFGPGLQGGSAGSPARFTIDTKGAGTGGLGLTVEGPCEAQLECLDNGDGTCSVSYVPTEPGDYNINILFADTHIPGSPFKAHVVPCF DASKVKCSGPGLERATAGEVGQFQVDCSSAGSAELTIEICSEAGLPAEVYIQDHGDGTHTITYIPLCPGAYTVTIKYGGQPVPNFPSKLQ VEPAVDTSGVQCYGPGIEGQGVFREATTEFSVDARALTQTGGPHVKARVANPSGNLTETYVQDRGDGMYKVEYTPYEEGLHSVDVTYDGS PVPSSPFQVPVTEGCDPSRVRVHGPGIQSGTTNKPNKFTVETRGAGTGGLGLAVEGPSEAKMSCMDNKDGSCSVEYIPYEAGTYSLNVTY GGHQVPGSPFKVPVHDVTDASKVKCSGPGLSPGMVRANLPQSFQVDTSKAGVAPLQVKVQGPKGLVEPVDVVDNADGTQTVNYVPSREGP YSISVLYGDEEVPRSPFKVKVLPTHDASKVKASGPGLNTTGVPASLPVEFTIDAKDAGEGLLAVQITDPEGKPKKTHIQDNHDGTYTVAY VPDVTGRYTILIKYGGDEIPFSPYRVRAVPTGDASKCTVTGAGIGPTIQIGEETVITVDTKAAGKGKVTCTVCTPDGSEVDVDVVENEDG TFDIFYTAPQPGKYVICVRFGGEHVPNSPFQVTALAGDQPSVQPPLRSQQLAPQYTYAQGGQQTWAPERPLVGVNGLDVTSLRPFDLVIP FTIKKGEITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYDNMHIPGAAFGAMNGLRLGLKETQNMAWSKPRNVQILNMV -------------------------------------------------------------- >In-frame_ENST00000422373_ENST00000260867_TCGA-BR-8365-01A_FLNA_chrX_153582519_-_TIMM23_chr10_51612988_length(transcript)=6577nt_BP=5782nt ATTCGCGTGGAGGCGCGTCGCGCGCAGCGGACGCCGACAGAATCCCCGAGGCGCCTGGCGCGGGCGCGGGCGCGAAGGCGATCCGGGCGC CACCCCGCGGTCATCGGTCACCGGTCGCTCTCAGGAACAGCAGCGCAACCTCTGCTCCCTGCCTCGCCTCCCGCGCGCCTAGGTGCCTGC GACTTTAATTAAAGGGCCGTCCCCTCGCCGAGGCTGCAGCACCGCCCCCCCGGCTTCTCGCGCCTCAAAATGAGTAGCTCCCACTCTCGG GCGGGCCAGAGCGCAGCAGGCGCGGCTCCGGGCGGCGGCGTCGACACGCGGGACGCCGAGATGCCGGCCACCGAGAAGGACCTGGCGGAG GACGCGCCGTGGAAGAAGATCCAGCAGAACACTTTCACGCGCTGGTGCAACGAGCACCTGAAGTGCGTGAGCAAGCGCATCGCCAACCTG CAGACGGACCTGAGCGACGGGCTGCGGCTTATCGCGCTGTTGGAGGTGCTCAGCCAGAAGAAGATGCACCGCAAGCACAACCAGCGGCCC ACTTTCCGCCAAATGCAGCTTGAGAACGTGTCGGTGGCGCTCGAGTTCCTGGACCGCGAGAGCATCAAACTGGTGTCCATCGACAGCAAG GCCATCGTGGACGGGAACCTGAAGCTGATCCTGGGCCTCATCTGGACCCTGATCCTGCACTACTCCATCTCCATGCCCATGTGGGACGAG GAGGAGGATGAGGAGGCCAAGAAGCAGACCCCCAAGCAGAGGCTCCTGGGCTGGATCCAGAACAAGCTGCCGCAGCTGCCCATCACCAAC TTCAGCCGGGACTGGCAGAGCGGCCGGGCCCTGGGCGCCCTGGTGGACAGCTGTGCCCCGGGCCTGTGTCCTGACTGGGACTCTTGGGAC GCCAGCAAGCCCGTTACCAATGCGCGAGAGGCCATGCAGCAGGCGGATGACTGGCTGGGCATCCCCCAGGTGATCACCCCCGAGGAGATT GTGGACCCCAACGTGGACGAGCACTCTGTCATGACCTACCTGTCCCAGTTCCCCAAGGCCAAGCTGAAGCCAGGGGCTCCCTTGCGGCCC AAACTGAACCCGAAGAAAGCCCGTGCCTACGGGCCAGGCATCGAGCCCACAGGCAACATGGTGAAGAAGCGGGCAGAGTTCACTGTGGAG ACCAGAAGTGCTGGCCAGGGAGAGGTGCTGGTGTACGTGGAGGACCCGGCCGGACACCAGGAGGAGGCAAAAGTGACCGCCAATAACGAC AAGAACCGCACCTTCTCCGTCTGGTACGTCCCCGAGGTGACGGGGACTCATAAGGTTACTGTGCTCTTTGCTGGCCAGCACATCGCCAAG AGCCCCTTCGAGGTGTACGTGGATAAGTCACAGGGTGACGCCAGCAAAGTGACAGCCCAAGGTCCCGGCCTGGAGCCCAGTGGCAACATC GCCAACAAGACCACCTACTTTGAGATCTTTACGGCAGGAGCTGGCACGGGCGAGGTCGAGGTTGTGATCCAGGACCCCATGGGACAGAAG GGCACGGTAGAGCCTCAGCTGGAGGCCCGGGGCGACAGCACATACCGCTGCAGCTACCAGCCCACCATGGAGGGCGTCCACACCGTGCAC GTCACGTTTGCCGGCGTGCCCATCCCTCGCAGCCCCTACACTGTCACTGTTGGCCAAGCCTGTAACCCGAGTGCCTGCCGGGCGGTTGGC CGGGGCCTCCAGCCCAAGGGTGTGCGGGTGAAGGAGACAGCTGACTTCAAGGTGTACACAAAGGGCGCTGGCAGTGGGGAGCTGAAGGTC ACCGTGAAGGGCCCCAAGGGAGAGGAGCGCGTGAAGCAGAAGGACCTGGGGGATGGCGTGTATGGCTTCGAGTATTACCCCATGGTCCCT GGAACCTATATCGTCACCATCACGTGGGGTGGTCAGAACATCGGGCGCAGTCCCTTCGAAGTGAAGGTGGGCACCGAGTGTGGCAATCAG AAGGTACGGGCCTGGGGCCCTGGGCTGGAGGGCGGCGTCGTTGGCAAGTCAGCAGACTTTGTGGTGGAGGCTATCGGGGACGACGTGGGC ACGCTGGGCTTCTCGGTGGAAGGGCCATCGCAGGCTAAGATCGAATGTGACGACAAGGGCGACGGCTCCTGTGATGTGCGCTACTGGCCG CAGGAGGCTGGCGAGTATGCCGTTCACGTGCTGTGCAACAGCGAAGACATCCGCCTCAGCCCCTTCATGGCTGACATCCGTGACGCGCCC CAGGACTTCCACCCAGACAGGGTGAAGGCACGTGGGCCTGGATTGGAGAAGACAGGTGTGGCCGTCAACAAGCCAGCAGAGTTCACAGTG GATGCCAAGCACGGTGGCAAGGCCCCACTTCGGGTCCAAGTCCAGGACAATGAAGGCTGCCCTGTGGAGGCGTTGGTCAAGGACAACGGC AATGGCACTTACAGCTGCTCCTACGTGCCCAGGAAGCCGGTGAAGCACACAGCCATGGTGTCCTGGGGAGGCGTCAGCATCCCCAACAGC CCCTTCAGGGTGAATGTGGGAGCTGGCAGCCACCCCAACAAGGTCAAAGTATACGGCCCCGGAGTAGCCAAGACAGGGCTCAAGGCCCAC GAGCCCACCTACTTCACTGTGGACTGCGCCGAGGCTGGCCAGGGGGACGTCAGCATCGGCATCAAGTGTGCCCCTGGAGTGGTAGGCCCC GCCGAAGCTGACATCGACTTCGACATCATCCGCAATGACAATGACACCTTCACGGTCAAGTACACGCCCCGGGGGGCTGGCAGCTACACC ATTATGGTCCTCTTTGCTGACCAGGCCACGCCCACCAGCCCCATCCGAGTCAAGGTGGAGCCCTCTCATGACGCCAGTAAGGTGAAGGCC GAGGGCCCTGGCCTCAGTCGCACTGGTGTCGAGCTTGGCAAGCCCACCCACTTCACAGTAAATGCCAAAGCTGCTGGCAAAGGCAAGCTG GACGTCCAGTTCTCAGGACTCACCAAGGGGGATGCAGTGCGAGATGTGGACATCATCGACCACCATGACAACACCTACACAGTCAAGTAC ACGCCTGTCCAGCAGGGTCCAGTAGGCGTCAATGTCACTTATGGAGGGGATCCCATCCCTAAGAGCCCTTTCTCAGTGGCAGTATCTCCA AGCCTGGACCTCAGCAAGATCAAGGTGTCTGGCCTGGGAGAGAAGGTGGACGTTGGCAAAGACCAGGAGTTCACAGTCAAATCAAAGGGT GCTGGTGGTCAAGGCAAAGTGGCATCCAAGATTGTGGGCCCCTCGGGTGCAGCGGTGCCCTGCAAGGTGGAGCCAGGCCTGGGGGCTGAC AACAGTGTGGTGCGCTTCCTGCCCCGTGAGGAAGGGCCCTATGAGGTGGAGGTGACCTATGACGGCGTGCCCGTGCCTGGCAGCCCCTTT CCTCTGGAAGCTGTGGCCCCCACCAAGCCTAGCAAGGTGAAGGCGTTTGGGCCGGGGCTGCAGGGAGGCAGTGCGGGCTCCCCCGCCCGC TTCACCATCGACACCAAGGGCGCCGGCACAGGTGGCCTGGGCCTGACGGTGGAGGGCCCCTGTGAGGCGCAGCTCGAGTGCTTGGACAAT GGGGATGGCACATGTTCCGTGTCCTACGTGCCCACCGAGCCCGGGGACTACAACATCAACATCCTCTTCGCTGACACCCACATCCCTGGC TCCCCATTCAAGGCCCACGTGGTTCCCTGCTTTGACGCATCCAAAGTCAAGTGCTCAGGCCCCGGGCTGGAGCGGGCCACCGCTGGGGAG GTGGGCCAATTCCAAGTGGACTGCTCGAGCGCGGGCAGCGCGGAGCTGACCATTGAGATCTGCTCGGAGGCGGGGCTTCCGGCCGAGGTG TACATCCAGGACCACGGTGATGGCACGCACACCATTACCTACATTCCCCTCTGCCCCGGGGCCTACACCGTCACCATCAAGTACGGCGGC CAGCCCGTGCCCAACTTCCCCAGCAAGCTGCAGGTGGAACCTGCGGTGGACACTTCCGGTGTCCAGTGCTATGGGCCTGGTATTGAGGGC CAGGGTGTCTTCCGTGAGGCCACCACTGAGTTCAGTGTGGACGCCCGGGCTCTGACACAGACCGGAGGGCCGCACGTCAAGGCCCGTGTG GCCAACCCCTCAGGCAACCTGACGGAGACCTACGTTCAGGACCGTGGCGATGGCATGTACAAAGTGGAGTACACGCCTTACGAGGAGGGA CTGCACTCCGTGGACGTGACCTATGACGGCAGTCCCGTGCCCAGCAGCCCCTTCCAGGTGCCCGTGACCGAGGGCTGCGACCCCTCCCGG GTGCGTGTCCACGGGCCAGGCATCCAAAGTGGCACCACCAACAAGCCCAACAAGTTCACTGTGGAGACCAGGGGAGCTGGCACGGGCGGC CTGGGCCTGGCTGTAGAGGGCCCCTCCGAGGCCAAGATGTCCTGCATGGATAACAAGGACGGCAGCTGCTCGGTCGAGTACATCCCTTAT GAGGCTGGCACCTACAGCCTCAACGTCACCTATGGTGGCCATCAAGTGCCAGGCAGTCCTTTCAAGGTCCCTGTGCATGATGTGACAGAT GCGTCCAAGGTCAAGTGCTCTGGGCCCGGCCTGAGCCCAGGCATGGTTCGTGCCAACCTCCCTCAGTCCTTCCAGGTGGACACAAGCAAG GCTGGTGTGGCCCCATTGCAGGTCAAAGTGCAAGGGCCCAAAGGCCTGGTGGAGCCAGTGGACGTGGTAGACAACGCTGATGGCACCCAG ACCGTCAATTATGTGCCCAGCCGAGAAGGGCCCTACAGCATCTCAGTACTGTATGGAGATGAAGAGGTACCCCGGAGCCCCTTCAAGGTC AAGGTGCTGCCTACTCATGATGCCAGCAAGGTGAAGGCCAGTGGCCCCGGGCTCAACACCACTGGCGTGCCTGCCAGCCTGCCCGTGGAG TTCACCATCGATGCAAAGGACGCCGGGGAGGGCCTGCTGGCTGTCCAGATCACGGATCCCGAAGGCAAGCCGAAGAAGACACACATCCAA GACAACCATGACGGCACGTATACAGTGGCCTACGTGCCAGACGTGACAGGTCGCTACACCATCCTCATCAAGTACGGTGGTGACGAGATC CCCTTCTCCCCGTACCGCGTGCGTGCCGTGCCCACCGGGGACGCCAGCAAGTGCACTGTCACAGGTGCTGGCATCGGCCCCACCATTCAG ATTGGGGAGGAGACGGTGATCACTGTGGACACTAAGGCGGCAGGCAAAGGCAAAGTGACGTGCACCGTGTGCACGCCTGATGGCTCAGAG GTGGATGTGGACGTGGTGGAGAATGAGGACGGCACTTTCGACATCTTCTACACGGCCCCCCAGCCGGGCAAATACGTCATCTGTGTGCGC TTTGGTGGCGAGCACGTGCCCAACAGCCCCTTCCAAGTGACGGCTCTGGCTGGGGACCAGCCCTCGGTGCAGCCCCCTCTACGGTCTCAG CAGCTGGCCCCACAGTACACCTACGCCCAGGGCGGCCAGCAGACTTGGGCCCCGGAGAGGCCCCTGGTGGGTGTCAATGGGCTGGATGTG ACCAGCCTGAGGCCCTTTGACCTTGTCATCCCCTTCACCATCAAGAAGGGCGAGATCACAGGGGAGGTTCGGATGCCCTCAGGCAAGGTG GCGCAGCCCACCATCACTGACAACAAAGACGGCACCGTGACCGTGCGGTATGCACCCAGCGAGGCTGGCCTGCACGAGATGGACATCCGC TATGACAACATGCACATCCCAGGGGCTGCGTTTGGTGCAATGAATGGTCTTCGGCTAGGATTGAAGGAAACCCAGAACATGGCCTGGTCC AAACCAAGAAATGTACAGATTTTGAATATGGTGACTAGGCAAGGGGCACTTTGGGCTAATACTCTAGGTTCTCTGGCTTTGCTCTATAGT GCATTTGGTGTCATCATTGAGAAAACACGAGGTGCAGAAGATGACCTTAACACAGTAGCAGCTGGAACCATGACAGGCATGTTGTATAAA TGTACAGGTGGTCTTCGAGGGATAGCACGAGGTGGTCTGACAGGACTAACACTTACCAGCCTCTATGCACTATATAATAACTGGGAGCAC ATGAAAGGCTCCTTGCTCCAACAGTCACTCTGAAGATTTTGCCAACTCATGAATGGAGGACACTTCAGTAGTCATCTAGATCCTTTTATA AGACAGTTTGGAGTTATTCTCTCTCTTCTACCTACAATTAGTTTGAAAAATTGGAGATTTTGATTTGCTGTGATGAAAATCCTGGATGGC TGACCAAGACTGGCACTTGTTCCAGCCATTAGTGAGTTGAAGCCAAAGCCCTTTGGTGACTCACTGAGTACCATGGTTCTGTTCTCCTCT GGAGATCTTGCACGTATCTGTTTTCCTCCCCCATGAACTAGAAAACCACTTACTCCCAGAATTCAGGTCGTGCTTGTTAGTACTATATCA CCAAGTCCATTCATTTAATGATCCAAAACTGTAATGTTGCACTGTATTCCAAATAAAGGGTAAAAACAGAACCAAAGTTATAACTCCAAC >In-frame_ENST00000422373_ENST00000260867_TCGA-BR-8365-01A_FLNA_chrX_153582519_-_TIMM23_chr10_51612988_length(amino acids)=1979AA_start in transcript=213_stop in transcript=6152 MQHRPPGFSRLKMSSSHSRAGQSAAGAAPGGGVDTRDAEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLI ALLEVLSQKKMHRKHNQRPTFRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDEEEDEEAKKQTP KQRLLGWIQNKLPQLPITNFSRDWQSGRALGALVDSCAPGLCPDWDSWDASKPVTNAREAMQQADDWLGIPQVITPEEIVDPNVDEHSVM TYLSQFPKAKLKPGAPLRPKLNPKKARAYGPGIEPTGNMVKKRAEFTVETRSAGQGEVLVYVEDPAGHQEEAKVTANNDKNRTFSVWYVP EVTGTHKVTVLFAGQHIAKSPFEVYVDKSQGDASKVTAQGPGLEPSGNIANKTTYFEIFTAGAGTGEVEVVIQDPMGQKGTVEPQLEARG DSTYRCSYQPTMEGVHTVHVTFAGVPIPRSPYTVTVGQACNPSACRAVGRGLQPKGVRVKETADFKVYTKGAGSGELKVTVKGPKGEERV KQKDLGDGVYGFEYYPMVPGTYIVTITWGGQNIGRSPFEVKVGTECGNQKVRAWGPGLEGGVVGKSADFVVEAIGDDVGTLGFSVEGPSQ AKIECDDKGDGSCDVRYWPQEAGEYAVHVLCNSEDIRLSPFMADIRDAPQDFHPDRVKARGPGLEKTGVAVNKPAEFTVDAKHGGKAPLR VQVQDNEGCPVEALVKDNGNGTYSCSYVPRKPVKHTAMVSWGGVSIPNSPFRVNVGAGSHPNKVKVYGPGVAKTGLKAHEPTYFTVDCAE AGQGDVSIGIKCAPGVVGPAEADIDFDIIRNDNDTFTVKYTPRGAGSYTIMVLFADQATPTSPIRVKVEPSHDASKVKAEGPGLSRTGVE LGKPTHFTVNAKAAGKGKLDVQFSGLTKGDAVRDVDIIDHHDNTYTVKYTPVQQGPVGVNVTYGGDPIPKSPFSVAVSPSLDLSKIKVSG LGEKVDVGKDQEFTVKSKGAGGQGKVASKIVGPSGAAVPCKVEPGLGADNSVVRFLPREEGPYEVEVTYDGVPVPGSPFPLEAVAPTKPS KVKAFGPGLQGGSAGSPARFTIDTKGAGTGGLGLTVEGPCEAQLECLDNGDGTCSVSYVPTEPGDYNINILFADTHIPGSPFKAHVVPCF DASKVKCSGPGLERATAGEVGQFQVDCSSAGSAELTIEICSEAGLPAEVYIQDHGDGTHTITYIPLCPGAYTVTIKYGGQPVPNFPSKLQ VEPAVDTSGVQCYGPGIEGQGVFREATTEFSVDARALTQTGGPHVKARVANPSGNLTETYVQDRGDGMYKVEYTPYEEGLHSVDVTYDGS PVPSSPFQVPVTEGCDPSRVRVHGPGIQSGTTNKPNKFTVETRGAGTGGLGLAVEGPSEAKMSCMDNKDGSCSVEYIPYEAGTYSLNVTY GGHQVPGSPFKVPVHDVTDASKVKCSGPGLSPGMVRANLPQSFQVDTSKAGVAPLQVKVQGPKGLVEPVDVVDNADGTQTVNYVPSREGP YSISVLYGDEEVPRSPFKVKVLPTHDASKVKASGPGLNTTGVPASLPVEFTIDAKDAGEGLLAVQITDPEGKPKKTHIQDNHDGTYTVAY VPDVTGRYTILIKYGGDEIPFSPYRVRAVPTGDASKCTVTGAGIGPTIQIGEETVITVDTKAAGKGKVTCTVCTPDGSEVDVDVVENEDG TFDIFYTAPQPGKYVICVRFGGEHVPNSPFQVTALAGDQPSVQPPLRSQQLAPQYTYAQGGQQTWAPERPLVGVNGLDVTSLRPFDLVIP FTIKKGEITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYDNMHIPGAAFGAMNGLRLGLKETQNMAWSKPRNVQILNMV -------------------------------------------------------------- >In-frame_ENST00000369850_ENST00000260867_TCGA-BR-8365-01A_FLNA_chrX_153582519_-_TIMM23_chr10_51612988_length(transcript)=6589nt_BP=5794nt GCGCGTCGCGCGCAGCGGACGCCGACAGAATCCCCGAGGCGCCTGGCGCGGGCGCGGGCGCGAAGGCGATCCGGGCGCCACCCCGCGGTC ATCGGTCACCGGTCGCTCTCAGGAACAGCAGCGCAACCTCTGCTCCCTGCCTCGCCTCCCGCGCGCCTAGGTGCCTGCGACTTTAATTAA AGGGCCGTCCCCTCGCCGAGGCTGCAGCACCGCCCCCCCGGCTTCTCGCGCCTCAAAATGAGTAGCTCCCACTCTCGGGCGGGCCAGAGC GCAGCAGGCGCGGCTCCGGGCGGCGGCGTCGACACGCGGGACGCCGAGATGCCGGCCACCGAGAAGGACCTGGCGGAGGACGCGCCGTGG AAGAAGATCCAGCAGAACACTTTCACGCGCTGGTGCAACGAGCACCTGAAGTGCGTGAGCAAGCGCATCGCCAACCTGCAGACGGACCTG AGCGACGGGCTGCGGCTTATCGCGCTGTTGGAGGTGCTCAGCCAGAAGAAGATGCACCGCAAGCACAACCAGCGGCCCACTTTCCGCCAA ATGCAGCTTGAGAACGTGTCGGTGGCGCTCGAGTTCCTGGACCGCGAGAGCATCAAACTGGTGTCCATCGACAGCAAGGCCATCGTGGAC GGGAACCTGAAGCTGATCCTGGGCCTCATCTGGACCCTGATCCTGCACTACTCCATCTCCATGCCCATGTGGGACGAGGAGGAGGATGAG GAGGCCAAGAAGCAGACCCCCAAGCAGAGGCTCCTGGGCTGGATCCAGAACAAGCTGCCGCAGCTGCCCATCACCAACTTCAGCCGGGAC TGGCAGAGCGGCCGGGCCCTGGGCGCCCTGGTGGACAGCTGTGCCCCGGGCCTGTGTCCTGACTGGGACTCTTGGGACGCCAGCAAGCCC GTTACCAATGCGCGAGAGGCCATGCAGCAGGCGGATGACTGGCTGGGCATCCCCCAGGTGATCACCCCCGAGGAGATTGTGGACCCCAAC GTGGACGAGCACTCTGTCATGACCTACCTGTCCCAGTTCCCCAAGGCCAAGCTGAAGCCAGGGGCTCCCTTGCGGCCCAAACTGAACCCG AAGAAAGCCCGTGCCTACGGGCCAGGCATCGAGCCCACAGGCAACATGGTGAAGAAGCGGGCAGAGTTCACTGTGGAGACCAGAAGTGCT GGCCAGGGAGAGGTGCTGGTGTACGTGGAGGACCCGGCCGGACACCAGGAGGAGGCAAAAGTGACCGCCAATAACGACAAGAACCGCACC TTCTCCGTCTGGTACGTCCCCGAGGTGACGGGGACTCATAAGGTTACTGTGCTCTTTGCTGGCCAGCACATCGCCAAGAGCCCCTTCGAG GTGTACGTGGATAAGTCACAGGGTGACGCCAGCAAAGTGACAGCCCAAGGTCCCGGCCTGGAGCCCAGTGGCAACATCGCCAACAAGACC ACCTACTTTGAGATCTTTACGGCAGGAGCTGGCACGGGCGAGGTCGAGGTTGTGATCCAGGACCCCATGGGACAGAAGGGCACGGTAGAG CCTCAGCTGGAGGCCCGGGGCGACAGCACATACCGCTGCAGCTACCAGCCCACCATGGAGGGCGTCCACACCGTGCACGTCACGTTTGCC GGCGTGCCCATCCCTCGCAGCCCCTACACTGTCACTGTTGGCCAAGCCTGTAACCCGAGTGCCTGCCGGGCGGTTGGCCGGGGCCTCCAG CCCAAGGGTGTGCGGGTGAAGGAGACAGCTGACTTCAAGGTGTACACAAAGGGCGCTGGCAGTGGGGAGCTGAAGGTCACCGTGAAGGGC CCCAAGGGAGAGGAGCGCGTGAAGCAGAAGGACCTGGGGGATGGCGTGTATGGCTTCGAGTATTACCCCATGGTCCCTGGAACCTATATC GTCACCATCACGTGGGGTGGTCAGAACATCGGGCGCAGTCCCTTCGAAGTGAAGGTGGGCACCGAGTGTGGCAATCAGAAGGTACGGGCC TGGGGCCCTGGGCTGGAGGGCGGCGTCGTTGGCAAGTCAGCAGACTTTGTGGTGGAGGCTATCGGGGACGACGTGGGCACGCTGGGCTTC TCGGTGGAAGGGCCATCGCAGGCTAAGATCGAATGTGACGACAAGGGCGACGGCTCCTGTGATGTGCGCTACTGGCCGCAGGAGGCTGGC GAGTATGCCGTTCACGTGCTGTGCAACAGCGAAGACATCCGCCTCAGCCCCTTCATGGCTGACATCCGTGACGCGCCCCAGGACTTCCAC CCAGACAGGGTGAAGGCACGTGGGCCTGGATTGGAGAAGACAGGTGTGGCCGTCAACAAGCCAGCAGAGTTCACAGTGGATGCCAAGCAC GGTGGCAAGGCCCCACTTCGGGTCCAAGTCCAGGACAATGAAGGCTGCCCTGTGGAGGCGTTGGTCAAGGACAACGGCAATGGCACTTAC AGCTGCTCCTACGTGCCCAGGAAGCCGGTGAAGCACACAGCCATGGTGTCCTGGGGAGGCGTCAGCATCCCCAACAGCCCCTTCAGGGTG AATGTGGGAGCTGGCAGCCACCCCAACAAGGTCAAAGTATACGGCCCCGGAGTAGCCAAGACAGGGCTCAAGGCCCACGAGCCCACCTAC TTCACTGTGGACTGCGCCGAGGCTGGCCAGGGGGACGTCAGCATCGGCATCAAGTGTGCCCCTGGAGTGGTAGGCCCCGCCGAAGCTGAC ATCGACTTCGACATCATCCGCAATGACAATGACACCTTCACGGTCAAGTACACGCCCCGGGGGGCTGGCAGCTACACCATTATGGTCCTC TTTGCTGACCAGGCCACGCCCACCAGCCCCATCCGAGTCAAGGTGGAGCCCTCTCATGACGCCAGTAAGGTGAAGGCCGAGGGCCCTGGC CTCAGTCGCACTGGTGTCGAGCTTGGCAAGCCCACCCACTTCACAGTAAATGCCAAAGCTGCTGGCAAAGGCAAGCTGGACGTCCAGTTC TCAGGACTCACCAAGGGGGATGCAGTGCGAGATGTGGACATCATCGACCACCATGACAACACCTACACAGTCAAGTACACGCCTGTCCAG CAGGGTCCAGTAGGCGTCAATGTCACTTATGGAGGGGATCCCATCCCTAAGAGCCCTTTCTCAGTGGCAGTATCTCCAAGCCTGGACCTC AGCAAGATCAAGGTGTCTGGCCTGGGAGAGAAGGTGGACGTTGGCAAAGACCAGGAGTTCACAGTCAAATCAAAGGGTGCTGGTGGTCAA GGCAAAGTGGCATCCAAGATTGTGGGCCCCTCGGGTGCAGCGGTGCCCTGCAAGGTGGAGCCAGGCCTGGGGGCTGACAACAGTGTGGTG CGCTTCCTGCCCCGTGAGGAAGGGCCCTATGAGGTGGAGGTGACCTATGACGGCGTGCCCGTGCCTGGCAGCCCCTTTCCTCTGGAAGCT GTGGCCCCCACCAAGCCTAGCAAGGTGAAGGCGTTTGGGCCGGGGCTGCAGGGAGGCAGTGCGGGCTCCCCCGCCCGCTTCACCATCGAC ACCAAGGGCGCCGGCACAGGTGGCCTGGGCCTGACGGTGGAGGGCCCCTGTGAGGCGCAGCTCGAGTGCTTGGACAATGGGGATGGCACA TGTTCCGTGTCCTACGTGCCCACCGAGCCCGGGGACTACAACATCAACATCCTCTTCGCTGACACCCACATCCCTGGCTCCCCATTCAAG GCCCACGTGGTTCCCTGCTTTGACGCATCCAAAGTCAAGTGCTCAGGCCCCGGGCTGGAGCGGGCCACCGCTGGGGAGGTGGGCCAATTC CAAGTGGACTGCTCGAGCGCGGGCAGCGCGGAGCTGACCATTGAGATCTGCTCGGAGGCGGGGCTTCCGGCCGAGGTGTACATCCAGGAC CACGGTGATGGCACGCACACCATTACCTACATTCCCCTCTGCCCCGGGGCCTACACCGTCACCATCAAGTACGGCGGCCAGCCCGTGCCC AACTTCCCCAGCAAGCTGCAGGTGGAACCTGCGGTGGACACTTCCGGTGTCCAGTGCTATGGGCCTGGTATTGAGGGCCAGGGTGTCTTC CGTGAGGCCACCACTGAGTTCAGTGTGGACGCCCGGGCTCTGACACAGACCGGAGGGCCGCACGTCAAGGCCCGTGTGGCCAACCCCTCA GGCAACCTGACGGAGACCTACGTTCAGGACCGTGGCGATGGCATGTACAAAGTGGAGTACACGCCTTACGAGGAGGGACTGCACTCCGTG GACGTGACCTATGACGGCAGTCCCGTGCCCAGCAGCCCCTTCCAGGTGCCCGTGACCGAGGGCTGCGACCCCTCCCGGGTGCGTGTCCAC GGGCCAGGCATCCAAAGTGGCACCACCAACAAGCCCAACAAGTTCACTGTGGAGACCAGGGGAGCTGGCACGGGCGGCCTGGGCCTGGCT GTAGAGGGCCCCTCCGAGGCCAAGATGTCCTGCATGGATAACAAGGACGGCAGCTGCTCGGTCGAGTACATCCCTTATGAGGCTGGCACC TACAGCCTCAACGTCACCTATGGTGGCCATCAAGTGCCAGGCAGTCCTTTCAAGGTCCCTGTGCATGATGTGACAGATGCGTCCAAGGTC AAGTGCTCTGGGCCCGGCCTGAGCCCAGGCATGGTTCGTGCCAACCTCCCTCAGTCCTTCCAGGTGGACACAAGCAAGGCTGGTGTGGCC CCATTGCAGGTCAAAGTGCAAGGGCCCAAAGGCCTGGTGGAGCCAGTGGACGTGGTAGACAACGCTGATGGCACCCAGACCGTCAATTAT GTGCCCAGCCGAGAAGGGCCCTACAGCATCTCAGTACTGTATGGAGATGAAGAGGTACCCCGGAGCCCCTTCAAGGTCAAGGTGCTGCCT ACTCATGATGCCAGCAAGGTGAAGGCCAGTGGCCCCGGGCTCAACACCACTGGCGTGCCTGCCAGCCTGCCCGTGGAGTTCACCATCGAT GCAAAGGACGCCGGGGAGGGCCTGCTGGCTGTCCAGATCACGGATCCCGAAGGCAAGCCGAAGAAGACACACATCCAAGACAACCATGAC GGCACGTATACAGTGGCCTACGTGCCAGACGTGACAGGTCGCTACACCATCCTCATCAAGTACGGTGGTGACGAGATCCCCTTCTCCCCG TACCGCGTGCGTGCCGTGCCCACCGGGGACGCCAGCAAGTGCACTGTCACAGTGTCAATCGGAGGTCACGGGCTAGGTGCTGGCATCGGC CCCACCATTCAGATTGGGGAGGAGACGGTGATCACTGTGGACACTAAGGCGGCAGGCAAAGGCAAAGTGACGTGCACCGTGTGCACGCCT GATGGCTCAGAGGTGGATGTGGACGTGGTGGAGAATGAGGACGGCACTTTCGACATCTTCTACACGGCCCCCCAGCCGGGCAAATACGTC ATCTGTGTGCGCTTTGGTGGCGAGCACGTGCCCAACAGCCCCTTCCAAGTGACGGCTCTGGCTGGGGACCAGCCCTCGGTGCAGCCCCCT CTACGGTCTCAGCAGCTGGCCCCACAGTACACCTACGCCCAGGGCGGCCAGCAGACTTGGGCCCCGGAGAGGCCCCTGGTGGGTGTCAAT GGGCTGGATGTGACCAGCCTGAGGCCCTTTGACCTTGTCATCCCCTTCACCATCAAGAAGGGCGAGATCACAGGGGAGGTTCGGATGCCC TCAGGCAAGGTGGCGCAGCCCACCATCACTGACAACAAAGACGGCACCGTGACCGTGCGGTATGCACCCAGCGAGGCTGGCCTGCACGAG ATGGACATCCGCTATGACAACATGCACATCCCAGGGGCTGCGTTTGGTGCAATGAATGGTCTTCGGCTAGGATTGAAGGAAACCCAGAAC ATGGCCTGGTCCAAACCAAGAAATGTACAGATTTTGAATATGGTGACTAGGCAAGGGGCACTTTGGGCTAATACTCTAGGTTCTCTGGCT TTGCTCTATAGTGCATTTGGTGTCATCATTGAGAAAACACGAGGTGCAGAAGATGACCTTAACACAGTAGCAGCTGGAACCATGACAGGC ATGTTGTATAAATGTACAGGTGGTCTTCGAGGGATAGCACGAGGTGGTCTGACAGGACTAACACTTACCAGCCTCTATGCACTATATAAT AACTGGGAGCACATGAAAGGCTCCTTGCTCCAACAGTCACTCTGAAGATTTTGCCAACTCATGAATGGAGGACACTTCAGTAGTCATCTA GATCCTTTTATAAGACAGTTTGGAGTTATTCTCTCTCTTCTACCTACAATTAGTTTGAAAAATTGGAGATTTTGATTTGCTGTGATGAAA ATCCTGGATGGCTGACCAAGACTGGCACTTGTTCCAGCCATTAGTGAGTTGAAGCCAAAGCCCTTTGGTGACTCACTGAGTACCATGGTT CTGTTCTCCTCTGGAGATCTTGCACGTATCTGTTTTCCTCCCCCATGAACTAGAAAACCACTTACTCCCAGAATTCAGGTCGTGCTTGTT AGTACTATATCACCAAGTCCATTCATTTAATGATCCAAAACTGTAATGTTGCACTGTATTCCAAATAAAGGGTAAAAACAGAACCAAAGT >In-frame_ENST00000369850_ENST00000260867_TCGA-BR-8365-01A_FLNA_chrX_153582519_-_TIMM23_chr10_51612988_length(amino acids)=1987AA_start in transcript=201_stop in transcript=6164 MQHRPPGFSRLKMSSSHSRAGQSAAGAAPGGGVDTRDAEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLI ALLEVLSQKKMHRKHNQRPTFRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDEEEDEEAKKQTP KQRLLGWIQNKLPQLPITNFSRDWQSGRALGALVDSCAPGLCPDWDSWDASKPVTNAREAMQQADDWLGIPQVITPEEIVDPNVDEHSVM TYLSQFPKAKLKPGAPLRPKLNPKKARAYGPGIEPTGNMVKKRAEFTVETRSAGQGEVLVYVEDPAGHQEEAKVTANNDKNRTFSVWYVP EVTGTHKVTVLFAGQHIAKSPFEVYVDKSQGDASKVTAQGPGLEPSGNIANKTTYFEIFTAGAGTGEVEVVIQDPMGQKGTVEPQLEARG DSTYRCSYQPTMEGVHTVHVTFAGVPIPRSPYTVTVGQACNPSACRAVGRGLQPKGVRVKETADFKVYTKGAGSGELKVTVKGPKGEERV KQKDLGDGVYGFEYYPMVPGTYIVTITWGGQNIGRSPFEVKVGTECGNQKVRAWGPGLEGGVVGKSADFVVEAIGDDVGTLGFSVEGPSQ AKIECDDKGDGSCDVRYWPQEAGEYAVHVLCNSEDIRLSPFMADIRDAPQDFHPDRVKARGPGLEKTGVAVNKPAEFTVDAKHGGKAPLR VQVQDNEGCPVEALVKDNGNGTYSCSYVPRKPVKHTAMVSWGGVSIPNSPFRVNVGAGSHPNKVKVYGPGVAKTGLKAHEPTYFTVDCAE AGQGDVSIGIKCAPGVVGPAEADIDFDIIRNDNDTFTVKYTPRGAGSYTIMVLFADQATPTSPIRVKVEPSHDASKVKAEGPGLSRTGVE LGKPTHFTVNAKAAGKGKLDVQFSGLTKGDAVRDVDIIDHHDNTYTVKYTPVQQGPVGVNVTYGGDPIPKSPFSVAVSPSLDLSKIKVSG LGEKVDVGKDQEFTVKSKGAGGQGKVASKIVGPSGAAVPCKVEPGLGADNSVVRFLPREEGPYEVEVTYDGVPVPGSPFPLEAVAPTKPS KVKAFGPGLQGGSAGSPARFTIDTKGAGTGGLGLTVEGPCEAQLECLDNGDGTCSVSYVPTEPGDYNINILFADTHIPGSPFKAHVVPCF DASKVKCSGPGLERATAGEVGQFQVDCSSAGSAELTIEICSEAGLPAEVYIQDHGDGTHTITYIPLCPGAYTVTIKYGGQPVPNFPSKLQ VEPAVDTSGVQCYGPGIEGQGVFREATTEFSVDARALTQTGGPHVKARVANPSGNLTETYVQDRGDGMYKVEYTPYEEGLHSVDVTYDGS PVPSSPFQVPVTEGCDPSRVRVHGPGIQSGTTNKPNKFTVETRGAGTGGLGLAVEGPSEAKMSCMDNKDGSCSVEYIPYEAGTYSLNVTY GGHQVPGSPFKVPVHDVTDASKVKCSGPGLSPGMVRANLPQSFQVDTSKAGVAPLQVKVQGPKGLVEPVDVVDNADGTQTVNYVPSREGP YSISVLYGDEEVPRSPFKVKVLPTHDASKVKASGPGLNTTGVPASLPVEFTIDAKDAGEGLLAVQITDPEGKPKKTHIQDNHDGTYTVAY VPDVTGRYTILIKYGGDEIPFSPYRVRAVPTGDASKCTVTVSIGGHGLGAGIGPTIQIGEETVITVDTKAAGKGKVTCTVCTPDGSEVDV DVVENEDGTFDIFYTAPQPGKYVICVRFGGEHVPNSPFQVTALAGDQPSVQPPLRSQQLAPQYTYAQGGQQTWAPERPLVGVNGLDVTSL RPFDLVIPFTIKKGEITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYDNMHIPGAAFGAMNGLRLGLKETQNMAWSKPR NVQILNMVTRQGALWANTLGSLALLYSAFGVIIEKTRGAEDDLNTVAAGTMTGMLYKCTGGLRGIARGGLTGLTLTSLYALYNNWEHMKG -------------------------------------------------------------- >In-frame_ENST00000369856_ENST00000260867_TCGA-BR-8365-01A_FLNA_chrX_153582519_-_TIMM23_chr10_51612988_length(transcript)=1612nt_BP=817nt AAGGACGCCGGGGAGGGCCTGCTGGCTGTCCAGATCACGGATCCCGAAGGCAAGCCGAAGAAGACACACATCCAAGACAACCATGACGGC ACGTATACAGTGGCCTACGTGCCAGACGTGACAGGTCGCTACACCATCCTCATCAAGTACGGTGGTGACGAGATCCCCTTCTCCCCGTAC CGCGTGCGTGCCGTGCCCACCGGGGACGCCAGCAAGTGCACTGTCACAGGTGCTGGCATCGGCCCCACCATTCAGATTGGGGAGGAGACG GTGATCACTGTGGACACTAAGGCGGCAGGCAAAGGCAAAGTGACGTGCACCGTGTGCACGCCTGATGGCTCAGAGGTGGATGTGGACGTG GTGGAGAATGAGGACGGCACTTTCGACATCTTCTACACGGCCCCCCAGCCGGGCAAATACGTCATCTGTGTGCGCTTTGGTGGCGAGCAC GTGCCCAACAGCCCCTTCCAAGTGACGGCTCTGGCTGGGGACCAGCCCTCGGTGCAGCCCCCTCTACGGTCTCAGCAGCTGGCCCCACAG TACACCTACGCCCAGGGCGGCCAGCAGACTTGGGCCCCGGAGAGGCCCCTGGTGGGTGTCAATGGGCTGGATGTGACCAGCCTGAGGCCC TTTGACCTTGTCATCCCCTTCACCATCAAGAAGGGCGAGATCACAGGGGAGGTTCGGATGCCCTCAGGCAAGGTGGCGCAGCCCACCATC ACTGACAACAAAGACGGCACCGTGACCGTGCGGTATGCACCCAGCGAGGCTGGCCTGCACGAGATGGACATCCGCTATGACAACATGCAC ATCCCAGGGGCTGCGTTTGGTGCAATGAATGGTCTTCGGCTAGGATTGAAGGAAACCCAGAACATGGCCTGGTCCAAACCAAGAAATGTA CAGATTTTGAATATGGTGACTAGGCAAGGGGCACTTTGGGCTAATACTCTAGGTTCTCTGGCTTTGCTCTATAGTGCATTTGGTGTCATC ATTGAGAAAACACGAGGTGCAGAAGATGACCTTAACACAGTAGCAGCTGGAACCATGACAGGCATGTTGTATAAATGTACAGGTGGTCTT CGAGGGATAGCACGAGGTGGTCTGACAGGACTAACACTTACCAGCCTCTATGCACTATATAATAACTGGGAGCACATGAAAGGCTCCTTG CTCCAACAGTCACTCTGAAGATTTTGCCAACTCATGAATGGAGGACACTTCAGTAGTCATCTAGATCCTTTTATAAGACAGTTTGGAGTT ATTCTCTCTCTTCTACCTACAATTAGTTTGAAAAATTGGAGATTTTGATTTGCTGTGATGAAAATCCTGGATGGCTGACCAAGACTGGCA CTTGTTCCAGCCATTAGTGAGTTGAAGCCAAAGCCCTTTGGTGACTCACTGAGTACCATGGTTCTGTTCTCCTCTGGAGATCTTGCACGT ATCTGTTTTCCTCCCCCATGAACTAGAAAACCACTTACTCCCAGAATTCAGGTCGTGCTTGTTAGTACTATATCACCAAGTCCATTCATT >In-frame_ENST00000369856_ENST00000260867_TCGA-BR-8365-01A_FLNA_chrX_153582519_-_TIMM23_chr10_51612988_length(amino acids)=389AA_start in transcript=18_stop in transcript=1187 MLAVQITDPEGKPKKTHIQDNHDGTYTVAYVPDVTGRYTILIKYGGDEIPFSPYRVRAVPTGDASKCTVTGAGIGPTIQIGEETVITVDT KAAGKGKVTCTVCTPDGSEVDVDVVENEDGTFDIFYTAPQPGKYVICVRFGGEHVPNSPFQVTALAGDQPSVQPPLRSQQLAPQYTYAQG GQQTWAPERPLVGVNGLDVTSLRPFDLVIPFTIKKGEITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYDNMHIPGAAF GAMNGLRLGLKETQNMAWSKPRNVQILNMVTRQGALWANTLGSLALLYSAFGVIIEKTRGAEDDLNTVAAGTMTGMLYKCTGGLRGIARG -------------------------------------------------------------- >In-frame_ENST00000344736_ENST00000260867_TCGA-BR-8365-01A_FLNA_chrX_153582519_-_TIMM23_chr10_51612988_length(transcript)=6275nt_BP=5480nt GCCGAGGCTGCAGCACCGCCCCCCCGGCTTCTCGCGCCTCAAAATGAGTAGCTCCCACTCTCGGGCGGGCCAGAGCGCAGCAGGCGCGGC TCCGGGCGGCGGCGTCGACACGCGGGACGCCGAGATGCCGGCCACCGAGAAGGACCTGGCGGAGGACGCGCCGTGGAAGAAGATCCAGCA GAACACTTTCACGCGCTGGTGCAACGAGCACCTGAAGTGCGTGAGCAAGCGCATCGCCAACCTGCAGACGGACCTGAGCGACGGGCTGCG GCTTATCGCGCTGTTGGAGGTGCTCAGCCAGAAGAAGATGCACCGCAAGCACAACCAGCGGCCCACTTTCCGCCAAATGCAGCTTGAGAA CGTGTCGGTGGCGCTCGAGTTCCTGGACCGCGAGAGCATCAAACTGGTGTCCATCGACAGCAAGGCCATCGTGGACGGGAACCTGAAGCT GATCCTGGGCCTCATCTGGACCCTGATCCTGCACTACTCCATCTCCATGCCCATGTGGGACGAGGAGGAGGATGAGGAGGCCAAGAAGCA GACCCCCAAGCAGAGGCTCCTGGGCTGGATCCAGAACAAGCTGCCGCAGCTGCCCATCACCAACTTCAGCCGGGACTGGCAGAGCGGCCG GGCCCTGGGCGCCCTGGTGGACAGCTGTGCCCCGGGCCTGTGTCCTGACTGGGACTCTTGGGACGCCAGCAAGCCCGTTACCAATGCGCG AGAGGCCATGCAGCAGGCGGATGACTGGCTGGGCATCCCCCAGGTGATCACCCCCGAGGAGATTGTGGACCCCAACGTGGACGAGCACTC TGTCATGACCTACCTGTCCCAGTTCCCCAAGGCCAAGCTGAAGCCAGGGGCTCCCTTGCGGCCCAAACTGAACCCGAAGAAAGCCCGTGC CTACGGGCCAGGCATCGAGCCCACAGGCAACATGGTGAAGAAGCGGGCAGAGTTCACTGTGGAGACCAGAAGTGCTGGCCAGGGAGAGGT GCTGGTGTACGTGGAGGACCCGGCCGGACACCAGGAGGAGGCAAAAGTGACCGCCAATAACGACAAGAACCGCACCTTCTCCGTCTGGTA CGTCCCCGAGGTGACGGGGACTCATAAGGTTACTGTGCTCTTTGCTGGCCAGCACATCGCCAAGAGCCCCTTCGAGGTGTACGTGGATAA GTCACAGGGTGACGCCAGCAAAGTGACAGCCCAAGGTCCCGGCCTGGAGCCCAGTGGCAACATCGCCAACAAGACCACCTACTTTGAGAT CTTTACGGCAGGAGCTGGCACGGGCGAGGTCGAGGTTGTGATCCAGGACCCCATGGGACAGAAGGGCACGGTAGAGCCTCAGCTGGAGGC CCGGGGCGACAGCACATACCGCTGCAGCTACCAGCCCACCATGGAGGGCGTCCACACCGTGCACGTCACGTTTGCCGGCGTGCCCATCCC TCGCAGCCCCTACACTGTCACTGTTGGCCAAGCCTGTAACCCGAGTGCCTGCCGGGCGGTTGGCCGGGGCCTCCAGCCCAAGGGTGTGCG GGTGAAGGAGACAGCTGACTTCAAGGTGTACACAAAGGGCGCTGGCAGTGGGGAGCTGAAGGTCACCGTGAAGGGCCCCAAGGGAGAGGA GCGCGTGAAGCAGAAGGACCTGGGGGATGGCGTGTATGGCTTCGAGTATTACCCCATGGTCCCTGGAACCTATATCGTCACCATCACGTG GGGTGGTCAGAACATCGGGCGCAGTCCCTTCGAAGTGAAGGTGGGCACCGAGTGTGGCAATCAGAAGGTACGGGCCTGGGGCCCTGGGCT GGAGGGCGGCGTCGTTGGCAAGTCAGCAGACTTTGTGGTGGAGGCTATCGGGGACGACGTGGGCACGCTGGGCTTCTCGGTGGAAGGGCC ATCGCAGGCTAAGATCGAATGTGACGACAAGGGCGACGGCTCCTGTGATGTGCGCTACTGGCCGCAGGAGGCTGGCGAGTATGCCGTTCA CGTGCTGTGCAACAGCGAAGACATCCGCCTCAGCCCCTTCATGGCTGACATCCGTGACGCGCCCCAGGACTTCCACCCAGACAGGGTGAA GGCACGTGGGCCTGGATTGGAGAAGACAGGTGTGGCCGTCAACAAGCCAGCAGAGTTCACAGTGGATGCCAAGCACGGTGGCAAGGCCCC ACTTCGGGTCCAAGTCCAGGACAATGAAGGCTGCCCTGTGGAGGCGTTGGTCAAGGACAACGGCAATGGCACTTACAGCTGCTCCTACGT GCCCAGGAAGCCGGTGAAGCACACAGCCATGGTGTCCTGGGGAGGCGTCAGCATCCCCAACAGCCCCTTCAGGGTGAATGTGGGAGCTGG CAGCCACCCCAACAAGGTCAAAGTATACGGCCCCGGAGTAGCCAAGACAGGGCTCAAGGCCCACGAGCCCACCTACTTCACTGTGGACTG CGCCGAGGCTGGCCAGGGGGACGTCAGCATCGGCATCAAGTGTGCCCCTGGAGTGGTAGGCCCCGCCGAAGCTGACATCGACTTCGACAT CATCCGCAATGACAATGACACCTTCACGGTCAAGTACACGCCCCGGGGGGCTGGCAGCTACACCATTATGGTCCTCTTTGCTGACCAGGC CACGCCCACCAGCCCCATCCGAGTCAAGGTGGAGCCCTCTCATGACGCCAGTAAGGTGAAGGCCGAGGGCCCTGGCCTCAGTCGCACTGG TGTCGAGCTTGGCAAGCCCACCCACTTCACAGTAAATGCCAAAGCTGCTGGCAAAGGCAAGCTGGACGTCCAGTTCTCAGGACTCACCAA GGGGGATGCAGTGCGAGATGTGGACATCATCGACCACCATGACAACACCTACACAGTCAAGTACACGCCTGTCCAGCAGGGTCCAGTAGG CGTCAATGTCACTTATGGAGGGGATCCCATCCCTAAGAGCCCTTTCTCAGTGGCAGTATCTCCAAGCCTGGACCTCAGCAAGATCAAGGT GTCTGGCCTGGGAGAGAAGGTGGACGTTGGCAAAGACCAGGAGTTCACAGTCAAATCAAAGGGTGCTGGTGGTCAAGGCAAAGTGGCATC CAAGATTGTGGGCCCCTCGGGTGCAGCGGTGCCCTGCAAGGTGGAGCCAGGCCTGGGGGCTGACAACAGTGTGGTGCGCTTCCTGCCCCG TGAGGAAGGGCCCTATGAGGTGGAGGTGACCTATGACGGCGTGCCCGTGCCTGGCAGCCCCTTTCCTCTGGAAGCTGTGGCCCCCACCAA GCCTAGCAAGGTGAAGGCGTTTGGGCCGGGGCTGCAGGGAGGCAGTGCGGGCTCCCCCGCCCGCTTCACCATCGACACCAAGGGCGCCGG CACAGGTGGCCTGGGCCTGACGGTGGAGGGCCCCTGTGAGGCGCAGCTCGAGTGCTTGGACAATGGGGATGGCACATGTTCCGTGTCCTA CGTGCCCACCGAGCCCGGGGACTACAACATCAACATCCTCTTCGCTGACACCCACATCCCTGGCTCCCCATTCAAGGCCCACGTGGTTCC CTGCTTTGACGCATCCAAAGTCAAGTGCTCAGGCCCCGGGCTGGAGCGGGCCACCGCTGGGGAGGTGGGCCAATTCCAAGTGGACTGCTC GAGCGCGGGCAGCGCGGAGCTGACCATTGAGATCTGCTCGGAGGCGGGGCTTCCGGCCGAGGTGTACATCCAGGACCACGGTGATGGCAC GCACACCATTACCTACATTCCCCTCTGCCCCGGGGCCTACACCGTCACCATCAAGTACGGCGGCCAGCCCGTGCCCAACTTCCCCAGCAA GCTGCAGGTGGAACCTGCGGTGGACACTTCCGGTGTCCAGTGCTATGGGCCTGGTATTGAGGGCCAGGGTGTCTTCCGTGAGGCCACCAC TGAGTTCAGTGTGGACGCCCGGGCTCTGACACAGACCGGAGGGCCGCACGTCAAGGCCCGTGTGGCCAACCCCTCAGGCAACCTGACGGA GACCTACGTTCAGGACCGTGGCGATGGCATGTACAAAGTGGAGTACACGCCTTACGAGGAGGGACTGCACTCCGTGGACGTGACCTATGA CGGCAGTCCCGTGCCCAGCAGCCCCTTCCAGGTGCCCGTGACCGAGGGCTGCGACCCCTCCCGGGTGCGTGTCCACGGGCCAGGCATCCA AAGTGGCACCACCAACAAGCCCAACAAGTTCACTGTGGAGACCAGGGGAGCTGGCACGGGCGGCCTGGGCCTGGCTGTAGAGGGCCCCTC CGAGGCCAAGATGTCCTGCATGGATAACAAGGACGGCAGCTGCTCGGTCGAGTACATCCCTTATGAGGCTGGCACCTACAGCCTCAACGT CACCTATGGTGGCCATCAAGTGCCAGGCAGTCCTTTCAAGGTCCCTGTGCATGATGTGACAGATGCGTCCAAGGTCAAGTGCTCTGGGCC CGGCCTGAGCCCAGGCATGGTTCGTGCCAACCTCCCTCAGTCCTTCCAGGTGGACACAAGCAAGGCTGGTGTGGCCCCATTGCAGGTCAA AGTGCAAGGGCCCAAAGGCCTGGTGGAGCCAGTGGACGTGGTAGACAACGCTGATGGCACCCAGACCGTCAATTATGTGCCCAGCCGAGA AGGGCCCTACAGCATCTCAGTACTGTATGGAGATGAAGAGGTACCCCGGAGCCCCTTCAAGGTCAAGGTGCTGCCTACTCATGATGCCAG CAAGGTGAAGGCCAGTGGCCCCGGGCTCAACACCACTGGCGTGCCTGCCAGCCTGCCCGTGGAGTTCACCATCGATGCAAAGGACGCCGG GGAGGGCCTGCTGGCTGTCCAGATCACGGATCCCGAAGGCAAGCCGAAGAAGACACACATCCAAGACAACCATGACGGCACGTATACAGT GGCCTACGTGCCAGACGTGACAGGTCGCTACACCATCCTCATCAAGTACGGTGGTGACGAGATCCCCTTCTCCCCGTACCGCGTGCGTGC CGTGCCCACCGGGGACGCCAGCAAGTGCACTGTCACAGGTGCTGGCATCGGCCCCACCATTCAGATTGGGGAGGAGACGGTGATCACTGT GGACACTAAGGCGGCAGGCAAAGGCAAAGTGACGTGCACCGTGTGCACGCCTGATGGCTCAGAGGTGGATGTGGACGTGGTGGAGAATGA GGACGGCACTTTCGACATCTTCTACACGGCCCCCCAGCCGGGCAAATACGTCATCTGTGTGCGCTTTGGTGGCGAGCACGTGCCCAACAG CCCCTTCCAAGTGACGGCCCCGGAGAGGCCCCTGGTGGGTGTCAATGGGCTGGATGTGACCAGCCTGAGGCCCTTTGACCTTGTCATCCC CTTCACCATCAAGAAGGGCGAGATCACAGGGGAGGTTCGGATGCCCTCAGGCAAGGTGGCGCAGCCCACCATCACTGACAACAAAGACGG CACCGTGACCGTGCGGTATGCACCCAGCGAGGCTGGCCTGCACGAGATGGACATCCGCTATGACAACATGCACATCCCAGGGGCTGCGTT TGGTGCAATGAATGGTCTTCGGCTAGGATTGAAGGAAACCCAGAACATGGCCTGGTCCAAACCAAGAAATGTACAGATTTTGAATATGGT GACTAGGCAAGGGGCACTTTGGGCTAATACTCTAGGTTCTCTGGCTTTGCTCTATAGTGCATTTGGTGTCATCATTGAGAAAACACGAGG TGCAGAAGATGACCTTAACACAGTAGCAGCTGGAACCATGACAGGCATGTTGTATAAATGTACAGGTGGTCTTCGAGGGATAGCACGAGG TGGTCTGACAGGACTAACACTTACCAGCCTCTATGCACTATATAATAACTGGGAGCACATGAAAGGCTCCTTGCTCCAACAGTCACTCTG AAGATTTTGCCAACTCATGAATGGAGGACACTTCAGTAGTCATCTAGATCCTTTTATAAGACAGTTTGGAGTTATTCTCTCTCTTCTACC TACAATTAGTTTGAAAAATTGGAGATTTTGATTTGCTGTGATGAAAATCCTGGATGGCTGACCAAGACTGGCACTTGTTCCAGCCATTAG TGAGTTGAAGCCAAAGCCCTTTGGTGACTCACTGAGTACCATGGTTCTGTTCTCCTCTGGAGATCTTGCACGTATCTGTTTTCCTCCCCC ATGAACTAGAAAACCACTTACTCCCAGAATTCAGGTCGTGCTTGTTAGTACTATATCACCAAGTCCATTCATTTAATGATCCAAAACTGT >In-frame_ENST00000344736_ENST00000260867_TCGA-BR-8365-01A_FLNA_chrX_153582519_-_TIMM23_chr10_51612988_length(amino acids)=1947AA_start in transcript=7_stop in transcript=5850 MQHRPPGFSRLKMSSSHSRAGQSAAGAAPGGGVDTRDAEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLI ALLEVLSQKKMHRKHNQRPTFRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDEEEDEEAKKQTP KQRLLGWIQNKLPQLPITNFSRDWQSGRALGALVDSCAPGLCPDWDSWDASKPVTNAREAMQQADDWLGIPQVITPEEIVDPNVDEHSVM TYLSQFPKAKLKPGAPLRPKLNPKKARAYGPGIEPTGNMVKKRAEFTVETRSAGQGEVLVYVEDPAGHQEEAKVTANNDKNRTFSVWYVP EVTGTHKVTVLFAGQHIAKSPFEVYVDKSQGDASKVTAQGPGLEPSGNIANKTTYFEIFTAGAGTGEVEVVIQDPMGQKGTVEPQLEARG DSTYRCSYQPTMEGVHTVHVTFAGVPIPRSPYTVTVGQACNPSACRAVGRGLQPKGVRVKETADFKVYTKGAGSGELKVTVKGPKGEERV KQKDLGDGVYGFEYYPMVPGTYIVTITWGGQNIGRSPFEVKVGTECGNQKVRAWGPGLEGGVVGKSADFVVEAIGDDVGTLGFSVEGPSQ AKIECDDKGDGSCDVRYWPQEAGEYAVHVLCNSEDIRLSPFMADIRDAPQDFHPDRVKARGPGLEKTGVAVNKPAEFTVDAKHGGKAPLR VQVQDNEGCPVEALVKDNGNGTYSCSYVPRKPVKHTAMVSWGGVSIPNSPFRVNVGAGSHPNKVKVYGPGVAKTGLKAHEPTYFTVDCAE AGQGDVSIGIKCAPGVVGPAEADIDFDIIRNDNDTFTVKYTPRGAGSYTIMVLFADQATPTSPIRVKVEPSHDASKVKAEGPGLSRTGVE LGKPTHFTVNAKAAGKGKLDVQFSGLTKGDAVRDVDIIDHHDNTYTVKYTPVQQGPVGVNVTYGGDPIPKSPFSVAVSPSLDLSKIKVSG LGEKVDVGKDQEFTVKSKGAGGQGKVASKIVGPSGAAVPCKVEPGLGADNSVVRFLPREEGPYEVEVTYDGVPVPGSPFPLEAVAPTKPS KVKAFGPGLQGGSAGSPARFTIDTKGAGTGGLGLTVEGPCEAQLECLDNGDGTCSVSYVPTEPGDYNINILFADTHIPGSPFKAHVVPCF DASKVKCSGPGLERATAGEVGQFQVDCSSAGSAELTIEICSEAGLPAEVYIQDHGDGTHTITYIPLCPGAYTVTIKYGGQPVPNFPSKLQ VEPAVDTSGVQCYGPGIEGQGVFREATTEFSVDARALTQTGGPHVKARVANPSGNLTETYVQDRGDGMYKVEYTPYEEGLHSVDVTYDGS PVPSSPFQVPVTEGCDPSRVRVHGPGIQSGTTNKPNKFTVETRGAGTGGLGLAVEGPSEAKMSCMDNKDGSCSVEYIPYEAGTYSLNVTY GGHQVPGSPFKVPVHDVTDASKVKCSGPGLSPGMVRANLPQSFQVDTSKAGVAPLQVKVQGPKGLVEPVDVVDNADGTQTVNYVPSREGP YSISVLYGDEEVPRSPFKVKVLPTHDASKVKASGPGLNTTGVPASLPVEFTIDAKDAGEGLLAVQITDPEGKPKKTHIQDNHDGTYTVAY VPDVTGRYTILIKYGGDEIPFSPYRVRAVPTGDASKCTVTGAGIGPTIQIGEETVITVDTKAAGKGKVTCTVCTPDGSEVDVDVVENEDG TFDIFYTAPQPGKYVICVRFGGEHVPNSPFQVTAPERPLVGVNGLDVTSLRPFDLVIPFTIKKGEITGEVRMPSGKVAQPTITDNKDGTV TVRYAPSEAGLHEMDIRYDNMHIPGAAFGAMNGLRLGLKETQNMAWSKPRNVQILNMVTRQGALWANTLGSLALLYSAFGVIIEKTRGAE -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for FLNA-TIMM23 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000360319 | - | 32 | 46 | 1490_1607 | 1844.3333333333333 | 2640.0 | furin |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000369850 | - | 34 | 48 | 1490_1607 | 1852.3333333333333 | 2648.0 | furin |
Hgene | FLNA | chrX:153582519 | chr10:51612988 | ENST00000422373 | - | 33 | 47 | 1490_1607 | 1844.3333333333333 | 2640.0 | furin |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for FLNA-TIMM23 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for FLNA-TIMM23 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | FLNA | C1848213 | Periventricular Heterotopia, X-Linked | 9 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
Hgene | FLNA | C0025237 | Melnick-Needles Syndrome | 7 | CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT |
Hgene | FLNA | C4707243 | Familial thoracic aortic aneurysm and aortic dissection | 7 | CLINGEN;GENOMICS_ENGLAND |
Hgene | FLNA | C0265251 | Oto-Palato-digital syndrome type 1 | 6 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
Hgene | FLNA | C1844696 | OTOPALATODIGITAL SYNDROME, TYPE II | 6 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
Hgene | FLNA | C0265293 | Frontometaphyseal dysplasia | 5 | CTD_human;GENOMICS_ENGLAND;ORPHANET |
Hgene | FLNA | C1846129 | Terminal Osseous Dysplasia and Pigmentary Defects | 4 | CTD_human;GENOMICS_ENGLAND;ORPHANET |
Hgene | FLNA | C4281559 | FRONTOMETAPHYSEAL DYSPLASIA 1 | 4 | GENOMICS_ENGLAND;UNIPROT |
Hgene | FLNA | C0262436 | Cardiac valvular dysplasia, X-linked | 2 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
Hgene | FLNA | C0543888 | Epileptic encephalopathy | 2 | GENOMICS_ENGLAND |
Hgene | FLNA | C1845902 | FG SYNDROME 2 | 2 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
Hgene | FLNA | C1868720 | Periventricular Nodular Heterotopia | 2 | CTD_human |
Hgene | FLNA | C2746068 | Congenital idiopathic intestinal pseudoobstruction | 2 | CTD_human;GENOMICS_ENGLAND |
Hgene | FLNA | C4551969 | Bilateral Periventricular Nodular Heterotopia | 2 | CTD_human |
Hgene | FLNA | C0006142 | Malignant neoplasm of breast | 1 | CTD_human |
Hgene | FLNA | C0010701 | Phyllodes Tumor | 1 | CTD_human |
Hgene | FLNA | C0013366 | Dyschondroplasias | 1 | CTD_human |
Hgene | FLNA | C0014544 | Epilepsy | 1 | CTD_human |
Hgene | FLNA | C0021847 | Intestinal Pseudo-Obstruction | 1 | ORPHANET |
Hgene | FLNA | C0023893 | Liver Cirrhosis, Experimental | 1 | CTD_human |
Hgene | FLNA | C0026760 | Multiple Epiphyseal Dysplasia | 1 | CTD_human |
Hgene | FLNA | C0029422 | Osteochondrodysplasias | 1 | CTD_human |
Hgene | FLNA | C0036391 | Schwartz-Jampel Syndrome | 1 | CTD_human |
Hgene | FLNA | C0038015 | Spondyloepiphyseal Dysplasia | 1 | CTD_human |
Hgene | FLNA | C0086237 | Epilepsy, Cryptogenic | 1 | CTD_human |
Hgene | FLNA | C0220769 | FG syndrome | 1 | CTD_human |
Hgene | FLNA | C0236018 | Aura | 1 | CTD_human |
Hgene | FLNA | C0268341 | Ehlers-Danlos syndrome type 5 | 1 | ORPHANET |
Hgene | FLNA | C0432272 | Van Buchem disease | 1 | CTD_human |
Hgene | FLNA | C0600066 | Malignant Cystosarcoma Phyllodes | 1 | CTD_human |
Hgene | FLNA | C0678222 | Breast Carcinoma | 1 | CTD_human |
Hgene | FLNA | C0751111 | Awakening Epilepsy | 1 | CTD_human |
Hgene | FLNA | C1257931 | Mammary Neoplasms, Human | 1 | CTD_human |
Hgene | FLNA | C1458155 | Mammary Neoplasms | 1 | CTD_human |
Hgene | FLNA | C1845235 | Heterotopia, Periventricular, Ehlers-Danlos Variant | 1 | CTD_human |
Hgene | FLNA | C1845546 | FG SYNDROME 4 (disorder) | 1 | CTD_human |
Hgene | FLNA | C1845567 | FG SYNDROME 3 | 1 | CTD_human |
Hgene | FLNA | C1855733 | Neuronal intestinal pseudoobstruction | 1 | ORPHANET |
Hgene | FLNA | C2751260 | Macrothrombocytopenia | 1 | GENOMICS_ENGLAND |
Hgene | FLNA | C3541456 | Spondyloepiphyseal Dysplasia Tarda, X-Linked | 1 | CTD_human |
Hgene | FLNA | C4551479 | Schwartz-Jampel Syndrome, Type 1 | 1 | CTD_human |
Hgene | FLNA | C4704874 | Mammary Carcinoma, Human | 1 | CTD_human |