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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:FOPNL-TMX3 (FusionGDB2 ID:30919) |
Fusion Gene Summary for FOPNL-TMX3 |
Fusion gene summary |
Fusion gene information | Fusion gene name: FOPNL-TMX3 | Fusion gene ID: 30919 | Hgene | Tgene | Gene symbol | FOPNL | TMX3 | Gene ID | 123811 | 54495 |
Gene name | centrosomal protein 20 | thioredoxin related transmembrane protein 3 | |
Synonyms | C16orf63|FOPNL|FOR20|PHSECRG2 | PDIA13|TXNDC10 | |
Cytomap | 16p13.11 | 18q22.1 | |
Type of gene | protein-coding | protein-coding | |
Description | lisH domain-containing protein FOPNLFGFR1OP N-terminal likeFOP-related protein of 20 kDalisH domain-containing protein C16orf63pluripotent embryonic stem cell-related protein | protein disulfide-isomerase TMX3protein disulfide isomerase family A, member 13thioredoxin domain containing 10thioredoxin domain-containing protein 10 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000255759, ENST00000573968, ENST00000573396, ENST00000575744, ENST00000575073, ENST00000573429, | ENST00000299608, ENST00000566887, ENST00000443099, ENST00000562706, | |
Fusion gene scores | * DoF score | 5 X 6 X 3=90 | 1 X 1 X 1=1 |
# samples | 5 | 1 | |
** MAII score | log2(5/90*10)=-0.84799690655495 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(1/1*10)=3.32192809488736 | |
Context | PubMed: FOPNL [Title/Abstract] AND TMX3 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | FOPNL(15967347)-TMX3(66369027), # samples:1 FOPNL(15967348)-TMX3(66369027), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | TMX3 | GO:0018171 | peptidyl-cysteine oxidation | 15623505 |
Fusion gene breakpoints across FOPNL (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across TMX3 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | Non-Cancer | TCGA-IN-8462-11A | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - |
ChimerDB4 | Non-Cancer | TCGA-IN-8462-11A | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - |
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Fusion Gene ORF analysis for FOPNL-TMX3 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000255759 | ENST00000299608 | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - |
5CDS-intron | ENST00000255759 | ENST00000566887 | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - |
5CDS-intron | ENST00000255759 | ENST00000443099 | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - |
5CDS-intron | ENST00000255759 | ENST00000562706 | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - |
intron-3CDS | ENST00000573968 | ENST00000299608 | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - |
intron-intron | ENST00000573968 | ENST00000566887 | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - |
intron-intron | ENST00000573968 | ENST00000443099 | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - |
intron-intron | ENST00000573968 | ENST00000562706 | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - |
intron-3CDS | ENST00000573396 | ENST00000299608 | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - |
intron-intron | ENST00000573396 | ENST00000566887 | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - |
intron-intron | ENST00000573396 | ENST00000443099 | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - |
intron-intron | ENST00000573396 | ENST00000562706 | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - |
In-frame | ENST00000575744 | ENST00000299608 | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - |
5CDS-intron | ENST00000575744 | ENST00000566887 | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - |
5CDS-intron | ENST00000575744 | ENST00000443099 | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - |
5CDS-intron | ENST00000575744 | ENST00000562706 | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - |
intron-3CDS | ENST00000575073 | ENST00000299608 | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - |
intron-intron | ENST00000575073 | ENST00000566887 | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - |
intron-intron | ENST00000575073 | ENST00000443099 | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - |
intron-intron | ENST00000575073 | ENST00000562706 | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - |
In-frame | ENST00000573429 | ENST00000299608 | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - |
5CDS-intron | ENST00000573429 | ENST00000566887 | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - |
5CDS-intron | ENST00000573429 | ENST00000443099 | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - |
5CDS-intron | ENST00000573429 | ENST00000562706 | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - |
In-frame | ENST00000255759 | ENST00000299608 | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - |
5CDS-intron | ENST00000255759 | ENST00000566887 | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - |
5CDS-intron | ENST00000255759 | ENST00000443099 | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - |
5CDS-intron | ENST00000255759 | ENST00000562706 | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - |
intron-3CDS | ENST00000573968 | ENST00000299608 | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - |
intron-intron | ENST00000573968 | ENST00000566887 | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - |
intron-intron | ENST00000573968 | ENST00000443099 | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - |
intron-intron | ENST00000573968 | ENST00000562706 | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - |
intron-3CDS | ENST00000573396 | ENST00000299608 | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - |
intron-intron | ENST00000573396 | ENST00000566887 | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - |
intron-intron | ENST00000573396 | ENST00000443099 | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - |
intron-intron | ENST00000573396 | ENST00000562706 | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - |
In-frame | ENST00000575744 | ENST00000299608 | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - |
5CDS-intron | ENST00000575744 | ENST00000566887 | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - |
5CDS-intron | ENST00000575744 | ENST00000443099 | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - |
5CDS-intron | ENST00000575744 | ENST00000562706 | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - |
intron-3CDS | ENST00000575073 | ENST00000299608 | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - |
intron-intron | ENST00000575073 | ENST00000566887 | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - |
intron-intron | ENST00000575073 | ENST00000443099 | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - |
intron-intron | ENST00000575073 | ENST00000562706 | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - |
In-frame | ENST00000573429 | ENST00000299608 | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - |
5CDS-intron | ENST00000573429 | ENST00000566887 | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - |
5CDS-intron | ENST00000573429 | ENST00000443099 | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - |
5CDS-intron | ENST00000573429 | ENST00000562706 | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000255759 | FOPNL | chr16 | 15967347 | - | ENST00000299608 | TMX3 | chr18 | 66369027 | - | 4823 | 478 | 30 | 1577 | 515 |
ENST00000575744 | FOPNL | chr16 | 15967347 | - | ENST00000299608 | TMX3 | chr18 | 66369027 | - | 4613 | 268 | 18 | 1367 | 449 |
ENST00000573429 | FOPNL | chr16 | 15967347 | - | ENST00000299608 | TMX3 | chr18 | 66369027 | - | 4894 | 549 | 29 | 1648 | 539 |
ENST00000255759 | FOPNL | chr16 | 15967348 | - | ENST00000299608 | TMX3 | chr18 | 66369027 | - | 4823 | 478 | 30 | 1577 | 515 |
ENST00000575744 | FOPNL | chr16 | 15967348 | - | ENST00000299608 | TMX3 | chr18 | 66369027 | - | 4613 | 268 | 18 | 1367 | 449 |
ENST00000573429 | FOPNL | chr16 | 15967348 | - | ENST00000299608 | TMX3 | chr18 | 66369027 | - | 4894 | 549 | 29 | 1648 | 539 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000255759 | ENST00000299608 | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - | 0.000137069 | 0.9998629 |
ENST00000575744 | ENST00000299608 | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - | 7.43E-05 | 0.99992573 |
ENST00000573429 | ENST00000299608 | FOPNL | chr16 | 15967347 | - | TMX3 | chr18 | 66369027 | - | 0.00015659 | 0.99984336 |
ENST00000255759 | ENST00000299608 | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - | 0.000137069 | 0.9998629 |
ENST00000575744 | ENST00000299608 | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - | 7.43E-05 | 0.99992573 |
ENST00000573429 | ENST00000299608 | FOPNL | chr16 | 15967348 | - | TMX3 | chr18 | 66369027 | - | 0.00015659 | 0.99984336 |
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Fusion Genomic Features for FOPNL-TMX3 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for FOPNL-TMX3 |
Go to FGviewer for the breakpoints of chr16:15967347-chr18:66369027 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | FOPNL | chr16:15967347 | chr18:66369027 | ENST00000255759 | - | 4 | 5 | 49_81 | 149.33333333333334 | 175.0 | Domain | LisH |
Hgene | FOPNL | chr16:15967348 | chr18:66369027 | ENST00000255759 | - | 4 | 5 | 49_81 | 149.33333333333334 | 175.0 | Domain | LisH |
Hgene | FOPNL | chr16:15967347 | chr18:66369027 | ENST00000255759 | - | 4 | 5 | 1_104 | 149.33333333333334 | 175.0 | Region | Note=Necessary and sufficient for homooligomerization and localization to centrosomes and pericentriolar satellites |
Hgene | FOPNL | chr16:15967348 | chr18:66369027 | ENST00000255759 | - | 4 | 5 | 1_104 | 149.33333333333334 | 175.0 | Region | Note=Necessary and sufficient for homooligomerization and localization to centrosomes and pericentriolar satellites |
Tgene | TMX3 | chr16:15967347 | chr18:66369027 | ENST00000299608 | 3 | 16 | 451_454 | 88.33333333333333 | 455.0 | Motif | Note=Di-lysine motif | |
Tgene | TMX3 | chr16:15967347 | chr18:66369027 | ENST00000562706 | 3 | 8 | 451_454 | 88.33333333333333 | 196.0 | Motif | Note=Di-lysine motif | |
Tgene | TMX3 | chr16:15967348 | chr18:66369027 | ENST00000299608 | 3 | 16 | 451_454 | 88.33333333333333 | 455.0 | Motif | Note=Di-lysine motif | |
Tgene | TMX3 | chr16:15967348 | chr18:66369027 | ENST00000562706 | 3 | 8 | 451_454 | 88.33333333333333 | 196.0 | Motif | Note=Di-lysine motif | |
Tgene | TMX3 | chr16:15967347 | chr18:66369027 | ENST00000299608 | 3 | 16 | 397_454 | 88.33333333333333 | 455.0 | Topological domain | Cytoplasmic | |
Tgene | TMX3 | chr16:15967347 | chr18:66369027 | ENST00000562706 | 3 | 8 | 397_454 | 88.33333333333333 | 196.0 | Topological domain | Cytoplasmic | |
Tgene | TMX3 | chr16:15967348 | chr18:66369027 | ENST00000299608 | 3 | 16 | 397_454 | 88.33333333333333 | 455.0 | Topological domain | Cytoplasmic | |
Tgene | TMX3 | chr16:15967348 | chr18:66369027 | ENST00000562706 | 3 | 8 | 397_454 | 88.33333333333333 | 196.0 | Topological domain | Cytoplasmic | |
Tgene | TMX3 | chr16:15967347 | chr18:66369027 | ENST00000299608 | 3 | 16 | 376_396 | 88.33333333333333 | 455.0 | Transmembrane | Helical | |
Tgene | TMX3 | chr16:15967347 | chr18:66369027 | ENST00000562706 | 3 | 8 | 376_396 | 88.33333333333333 | 196.0 | Transmembrane | Helical | |
Tgene | TMX3 | chr16:15967348 | chr18:66369027 | ENST00000299608 | 3 | 16 | 376_396 | 88.33333333333333 | 455.0 | Transmembrane | Helical | |
Tgene | TMX3 | chr16:15967348 | chr18:66369027 | ENST00000562706 | 3 | 8 | 376_396 | 88.33333333333333 | 196.0 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | TMX3 | chr16:15967347 | chr18:66369027 | ENST00000299608 | 3 | 16 | 25_128 | 88.33333333333333 | 455.0 | Domain | Thioredoxin | |
Tgene | TMX3 | chr16:15967347 | chr18:66369027 | ENST00000562706 | 3 | 8 | 25_128 | 88.33333333333333 | 196.0 | Domain | Thioredoxin | |
Tgene | TMX3 | chr16:15967348 | chr18:66369027 | ENST00000299608 | 3 | 16 | 25_128 | 88.33333333333333 | 455.0 | Domain | Thioredoxin | |
Tgene | TMX3 | chr16:15967348 | chr18:66369027 | ENST00000562706 | 3 | 8 | 25_128 | 88.33333333333333 | 196.0 | Domain | Thioredoxin | |
Tgene | TMX3 | chr16:15967347 | chr18:66369027 | ENST00000299608 | 3 | 16 | 25_375 | 88.33333333333333 | 455.0 | Topological domain | Lumenal | |
Tgene | TMX3 | chr16:15967347 | chr18:66369027 | ENST00000562706 | 3 | 8 | 25_375 | 88.33333333333333 | 196.0 | Topological domain | Lumenal | |
Tgene | TMX3 | chr16:15967348 | chr18:66369027 | ENST00000299608 | 3 | 16 | 25_375 | 88.33333333333333 | 455.0 | Topological domain | Lumenal | |
Tgene | TMX3 | chr16:15967348 | chr18:66369027 | ENST00000562706 | 3 | 8 | 25_375 | 88.33333333333333 | 196.0 | Topological domain | Lumenal |
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Fusion Gene Sequence for FOPNL-TMX3 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000255759_ENST00000299608_TCGA-IN-8462-11A_FOPNL_chr16_15967347_-_TMX3_chr18_66369027_length(transcript)=4823nt_BP=478nt CCGCGGTGCGGCCCTGGCGGCCGTTGAAAAATGGCGACTGTGGCAGAGTTGAAGGCTGTTTTAAAGGACACCTTGGAAAAAAAGGGGGTA TTAGGGCATTTAAAAGCAAGGATCCGAGCTGAAGTTTTCAATGCCCTAGATGATGACCGTGAACCCCGACCATCATTGTCTCATGAAAAC CTTCTAATTAATGAATTAATTCGAGAGTATTTAGAATTCAACAAATATAAGTATACAGCATCTGTCCTCATAGCAGAATCTGGTCAACCT GTAGTTCCGTTGGACAGACAGTTTCTCATCCATGAACTAAATGCATTTGAAGAATCAAAGGATAATACAATACCTCTTTTATATGGGATT TTAGCCCATTTCTTGCGTGGAACTAAGGATGGCATCCAGAATGCATTTCTGAAAGGGCCTTCACTTCAGCCTTCAGACCCAAGTCTTGGC AGACAACCTAGTAGAAGAAAGCCAATGGGCATTGCTTCAGAGTTTGGAGTTCGAGGTTATCCAACAATTAAGCTATTAAAAGGGGACTTG GCATATAATTATAGAGGACCACGAACAAAAGATGATATTATTGAGTTTGCTCACAGAGTATCTGGGGCTCTAATTCGGCCACTTCCAAGT CAACAAATGTTTGAACATATGCAGAAGAGACACCGTGTATTTTTCGTTTATGTAGGTGGAGAATCACCTTTGAAAGAGAAATACATAGAT GCTGCTTCAGAATTGATTGTATATACATACTTCTTTTCTGCCTCAGAAGAAGTGGTTCCTGAGTATGTGACACTAAAAGAGATGCCAGCT GTGCTTGTTTTCAAAGATGAAACTTACTTTGTTTATGATGAGTATGAAGATGGTGATCTGTCATCATGGATCAACAGGGAAAGGTTTCAG AATTACCTTGCTATGGATGGCTTCCTCTTGTATGAACTTGGAGACACAGGAAAGCTTGTGGCTCTTGCAGTTATTGATGAGAAAAATACA TCAGTTGAACATACCAGATTGAAGTCAATTATTCAGGAAGTTGCAAGAGATTACAGAGACCTCTTCCATAGGGATTTTCAGTTTGGCCAC ATGGATGGAAATGACTACATAAATACCTTGCTGATGGATGAATTGACAGTCCCAACTGTAGTTGTACTGAATACTTCAAACCAGCAATAT TTCTTGCTAGATAGACAGATTAAGAATGTTGAAGACATGGTCCAGTTTATTAATAACATTTTGGATGGCACAGTAGAAGCCCAAGGAGGT GATAGCATTTTGCAGAGATTGAAAAGAATAGTATTTGATGCCAAATCTACTATTGTGTCTATATTCAAGAGCTCACCACTGATGGGCTGC TTTCTCTTTGGCCTGCCACTGGGTGTCATCAGTATCATGTGCTATGGAATCTACACAGCCGACACAGATGGAGGTTATATAGAAGAACGA TATGAAGTGTCTAAAAGTGAAAATGAAAACCAAGAACAGATAGAAGAGAGCAAAGAACAGCAGGAGCCCAGCAGTGGAGGATCTGTAGTG CCTACAGTGCAGGAGCCCAAGGATGTATTAGAAAAGAAGAAAGATTGAGACTTGATGACTATAAAATATTTGTTAGGACTTCAAATTATT AAAGAGTCTATTTATTGAATTTAGACATTTAATCATGATCTTTACAGAAAAGAACATGTTATTCGTATTTTGCTAATATCAACTGCATGG ATTAAAGTAGTCCCTCCATACATGGGGAAGTGTTTGGAGCAAAGAGATGAACAGTTTGTCTGAAACAAACACAGAGCACTCCATCAAAAT TTACCTGATCTTTGTGATTAGAACAGAACAATTCTATTTGCATGTTTCTCTATCTGAATATTCTGTGACAAAAAGTTAAGATTCTTGGGC AGAATATTTAAATTGGTCAGTCAGGTAGAAGATACATGTGTGATATAGAAAAATAATGCCTCTCCTGCTGCCATCCGTTTCCCTCATATA TTTTGGACAAGATTTATATGGACAAAATTAAGTCTTTAAAATTTAGGCACTTTAAGGAGAACTAATAACTTTTTCCATGTATCAAGATTA TGAGGTTAAAAATAATGTGGTTTTATATAGCATAGTGGTTTTATTTTGTTAGTTATTTTTAAAGGAGAAGAAATGTTACTTTTTAACTTT ATACTCAGTTGCATTATCATAAAATTTTCATATATGCCTAGATAATGGGGAAAAAAAGTCTTGTGATTGACTTTCGCAAAATAAACAGGA TTTACTGAGTAGAGGTTTCAGCCCATTCCTTGGAATACTAACAGGTATTTCATCAGTCATTGTAGGTTGGGAAGGGTCTCTGTTAATCCT ACTCTGCTTTAGCCAGAATAGCCTAGTATTTTATTTCTATTTTATATATTGAGATTTCTTCTAACATTTCCTTTGATAAAAATCTTCTGC TTTTTGAAAAGTGGTATGTATCATATTTTTATGTTTCTGGTGTGTGAACTTTATGGTAACTTCTACTCTAGAATACGTACGTATGCACCC ACAGACACACACAGTTTATTGACACATCTATTATGTAATGCTGTAGACCTGTCCGTGTCTGCTTCATAAGGAGTAACGACTGACATTAGC ATGTCCAGTGACAAGTCACATCCGGTGTAAAAAAAAGAGATCAGCCAGTTACCTTCTCCATTGTCTTAGTTCTGTCACCCATTTCGTCAA GTGACCTCTCATCTTCTATAAACTAATACAGGAATTCTTTCCAAAGCAATGTCTAAAAACTCTTTTTTTTAAAGTAACAGTTTGGTATGT TTATTGTAGATAAATTATTTTTGAGGCCTTCATTTTAGCTAAGTTTAGAATTTATATTAGGCAACTATGATTTGAGTGGTTATTCATTGA GTAATTTTCCACTATAAAGAATTTTATTGAACATTTATTAAAAAATAATGTAATGCATGGTCAAAAAATATGTAATTCATGGTCTGGACA CTGACGTTGTTTAGGGATTTAGTCATCAAGGACAGCCCTCTGTTGTTTCTAATGCCGTACTAATCAAGACTGTATGGACACTTGCATCTT AAGTACTAAGGAATTACTAGTGATTGTTTTATTTTATCCATGTACTCTTTTAGTATTTAATAATTAAATACCTATTCTTAGTGTTTGACA CTCCATATTTCTTTTTTTTGGAAATGAAACAAATATGCAGTCCAAAATTCAGGAACTACTAGAGTGAAATGATATTAAGTGGAAACCAGA GATAAATGCTGTTAATTTAACAAGTAGATTCTTCTCCAAAGAATGATGAGTGATTCTTGGGAAGATAAATGTTAATGTTCCCAATAGTCA AGCTTGTTTTGCAGTAGTGAAAAGCTTAGATGAGTACGGATACCTCATTTGAAACTCAGCCTAGTAAGGAAGTGAAAACTTAGCAGTCAG TGACATGGGGAAATAGTTATAGAAAATGTCACTGAATTTTTTCATATTTATAATTAGTCATTTACATATTTTTGTCTTGTTGATCATTAC CTGTAAATGAAAGACCTTAATAGGAAAAAAAGAGTAAAGCTCAGTGTGAATGCAAACATCCACAAAATATGATCTTCGTTTATATTCTGT GATGTTGTTTATAAATGAATGCCTCAGTTCTCTGCTACCCTTTTCACAGCTTTGTACTGTTTGCCTTATATTCTATTTGTGCTTTTAAAG TGTGTCTGTTGGGAAAACAAAATGTGTAGGTGGTTTGTAAGTGAATAATTTTTATTTCTTCTTGTATTAAAATTTTGTTTTTTTCTCTAC TTTGGGAGATGTTTATTTACATTGTCAGACTATTCACAAAACAGATTCTAAAATTTGTTTGCTCGTATGCTGTTCCCTTCAATGTGATAT CAGAGATTACTATGAATGTTAGTTTCATTCCGTGAAACATTACTTCCATATAAAGACAGATCTCTTAATAAGTGAATCTAGTGGAAGAAC ATAGGTATCATTCTAATTCCATGGTAAATTTTGTCATGATTCTATATGAATAATGGGGTCCTTCAGGAAGTTGGAATTTTTGCCTTCTCT TTTAATTGCAGTGAAGTTCTCTTTATAACTTCTAAAATTCGGAATTCTAGATCCTTGCTTTTGCAGAATTTGGTGCTCAGACAATATTTA AGGACATTTCAGCGAGACAAAGTGCATGTTTTTATCGAGTACCCTGTGCACCACATTATATCTGGCAATTCTTTTTGTTTCATTATGTGC ATCAATATTTTTCTCAGCTACTATTACCTGAAACTTGTTTAACATGTATTAGACCTAGAATTTTCATTTTCTTTCTCACATAGTTGCTTC CTGGTATCTGATTTAGAAATAACATTTAAATGCCAAGTATCTGGGGGATTGAAGGAAGGGTCTATATGAGCAGGTGAATTAGCAGTACTG TTTTTGTTTAGTGGATATTGTTAGTGACTTTTTGTGTGTGTTTTGCTTTGGGACCTTTTTATTTTGGTGTTGCAAAAAGTAACATATTTT CATCATTGCTTCATACGACATGGAGTTAGGACAGGGAAAAATCATTCAACACTCCTTATGCATTAAATGATCAAATAAACCAGTGTAGGA TATTAAGACTATCAATTGGTGGGATTAGGCTTGACATTTTATTTTTATAAATATATATTTTTTCTGAATGTGTCTGAGTCCAAGAGTGGG CAAAAAATAATTTTCTACTTTGGACTAATCTATAGAGGTTTTTGAAAGTCTGCATTACTAACTTGTTGAATTCATGATATTCTGCCTATG >In-frame_ENST00000255759_ENST00000299608_TCGA-IN-8462-11A_FOPNL_chr16_15967347_-_TMX3_chr18_66369027_length(amino acids)=515AA_start in transcript=30_stop in transcript=1577 MATVAELKAVLKDTLEKKGVLGHLKARIRAEVFNALDDDREPRPSLSHENLLINELIREYLEFNKYKYTASVLIAESGQPVVPLDRQFLI HELNAFEESKDNTIPLLYGILAHFLRGTKDGIQNAFLKGPSLQPSDPSLGRQPSRRKPMGIASEFGVRGYPTIKLLKGDLAYNYRGPRTK DDIIEFAHRVSGALIRPLPSQQMFEHMQKRHRVFFVYVGGESPLKEKYIDAASELIVYTYFFSASEEVVPEYVTLKEMPAVLVFKDETYF VYDEYEDGDLSSWINRERFQNYLAMDGFLLYELGDTGKLVALAVIDEKNTSVEHTRLKSIIQEVARDYRDLFHRDFQFGHMDGNDYINTL LMDELTVPTVVVLNTSNQQYFLLDRQIKNVEDMVQFINNILDGTVEAQGGDSILQRLKRIVFDAKSTIVSIFKSSPLMGCFLFGLPLGVI -------------------------------------------------------------- >In-frame_ENST00000575744_ENST00000299608_TCGA-IN-8462-11A_FOPNL_chr16_15967347_-_TMX3_chr18_66369027_length(transcript)=4613nt_BP=268nt CCTGGCGGCCGTTGAAAAATGGCGACTGTGGCAGAGTTGAAGGCTGAATCTGGTCAACCTGTAGTTCCGTTGGACAGACAGTTTCTCATC CATGAACTAAATGCATTTGAAGAATCAAAGGATAATACAATACCTCTTTTATATGGGATTTTAGCCCATTTCTTGCGTGGAACTAAGGAT GGCATCCAGAATGCATTTCTGAAAGGGCCTTCACTTCAGCCTTCAGACCCAAGTCTTGGCAGACAACCTAGTAGAAGAAAGCCAATGGGC ATTGCTTCAGAGTTTGGAGTTCGAGGTTATCCAACAATTAAGCTATTAAAAGGGGACTTGGCATATAATTATAGAGGACCACGAACAAAA GATGATATTATTGAGTTTGCTCACAGAGTATCTGGGGCTCTAATTCGGCCACTTCCAAGTCAACAAATGTTTGAACATATGCAGAAGAGA CACCGTGTATTTTTCGTTTATGTAGGTGGAGAATCACCTTTGAAAGAGAAATACATAGATGCTGCTTCAGAATTGATTGTATATACATAC TTCTTTTCTGCCTCAGAAGAAGTGGTTCCTGAGTATGTGACACTAAAAGAGATGCCAGCTGTGCTTGTTTTCAAAGATGAAACTTACTTT GTTTATGATGAGTATGAAGATGGTGATCTGTCATCATGGATCAACAGGGAAAGGTTTCAGAATTACCTTGCTATGGATGGCTTCCTCTTG TATGAACTTGGAGACACAGGAAAGCTTGTGGCTCTTGCAGTTATTGATGAGAAAAATACATCAGTTGAACATACCAGATTGAAGTCAATT ATTCAGGAAGTTGCAAGAGATTACAGAGACCTCTTCCATAGGGATTTTCAGTTTGGCCACATGGATGGAAATGACTACATAAATACCTTG CTGATGGATGAATTGACAGTCCCAACTGTAGTTGTACTGAATACTTCAAACCAGCAATATTTCTTGCTAGATAGACAGATTAAGAATGTT GAAGACATGGTCCAGTTTATTAATAACATTTTGGATGGCACAGTAGAAGCCCAAGGAGGTGATAGCATTTTGCAGAGATTGAAAAGAATA GTATTTGATGCCAAATCTACTATTGTGTCTATATTCAAGAGCTCACCACTGATGGGCTGCTTTCTCTTTGGCCTGCCACTGGGTGTCATC AGTATCATGTGCTATGGAATCTACACAGCCGACACAGATGGAGGTTATATAGAAGAACGATATGAAGTGTCTAAAAGTGAAAATGAAAAC CAAGAACAGATAGAAGAGAGCAAAGAACAGCAGGAGCCCAGCAGTGGAGGATCTGTAGTGCCTACAGTGCAGGAGCCCAAGGATGTATTA GAAAAGAAGAAAGATTGAGACTTGATGACTATAAAATATTTGTTAGGACTTCAAATTATTAAAGAGTCTATTTATTGAATTTAGACATTT AATCATGATCTTTACAGAAAAGAACATGTTATTCGTATTTTGCTAATATCAACTGCATGGATTAAAGTAGTCCCTCCATACATGGGGAAG TGTTTGGAGCAAAGAGATGAACAGTTTGTCTGAAACAAACACAGAGCACTCCATCAAAATTTACCTGATCTTTGTGATTAGAACAGAACA ATTCTATTTGCATGTTTCTCTATCTGAATATTCTGTGACAAAAAGTTAAGATTCTTGGGCAGAATATTTAAATTGGTCAGTCAGGTAGAA GATACATGTGTGATATAGAAAAATAATGCCTCTCCTGCTGCCATCCGTTTCCCTCATATATTTTGGACAAGATTTATATGGACAAAATTA AGTCTTTAAAATTTAGGCACTTTAAGGAGAACTAATAACTTTTTCCATGTATCAAGATTATGAGGTTAAAAATAATGTGGTTTTATATAG CATAGTGGTTTTATTTTGTTAGTTATTTTTAAAGGAGAAGAAATGTTACTTTTTAACTTTATACTCAGTTGCATTATCATAAAATTTTCA TATATGCCTAGATAATGGGGAAAAAAAGTCTTGTGATTGACTTTCGCAAAATAAACAGGATTTACTGAGTAGAGGTTTCAGCCCATTCCT TGGAATACTAACAGGTATTTCATCAGTCATTGTAGGTTGGGAAGGGTCTCTGTTAATCCTACTCTGCTTTAGCCAGAATAGCCTAGTATT TTATTTCTATTTTATATATTGAGATTTCTTCTAACATTTCCTTTGATAAAAATCTTCTGCTTTTTGAAAAGTGGTATGTATCATATTTTT ATGTTTCTGGTGTGTGAACTTTATGGTAACTTCTACTCTAGAATACGTACGTATGCACCCACAGACACACACAGTTTATTGACACATCTA TTATGTAATGCTGTAGACCTGTCCGTGTCTGCTTCATAAGGAGTAACGACTGACATTAGCATGTCCAGTGACAAGTCACATCCGGTGTAA AAAAAAGAGATCAGCCAGTTACCTTCTCCATTGTCTTAGTTCTGTCACCCATTTCGTCAAGTGACCTCTCATCTTCTATAAACTAATACA GGAATTCTTTCCAAAGCAATGTCTAAAAACTCTTTTTTTTAAAGTAACAGTTTGGTATGTTTATTGTAGATAAATTATTTTTGAGGCCTT CATTTTAGCTAAGTTTAGAATTTATATTAGGCAACTATGATTTGAGTGGTTATTCATTGAGTAATTTTCCACTATAAAGAATTTTATTGA ACATTTATTAAAAAATAATGTAATGCATGGTCAAAAAATATGTAATTCATGGTCTGGACACTGACGTTGTTTAGGGATTTAGTCATCAAG GACAGCCCTCTGTTGTTTCTAATGCCGTACTAATCAAGACTGTATGGACACTTGCATCTTAAGTACTAAGGAATTACTAGTGATTGTTTT ATTTTATCCATGTACTCTTTTAGTATTTAATAATTAAATACCTATTCTTAGTGTTTGACACTCCATATTTCTTTTTTTTGGAAATGAAAC AAATATGCAGTCCAAAATTCAGGAACTACTAGAGTGAAATGATATTAAGTGGAAACCAGAGATAAATGCTGTTAATTTAACAAGTAGATT CTTCTCCAAAGAATGATGAGTGATTCTTGGGAAGATAAATGTTAATGTTCCCAATAGTCAAGCTTGTTTTGCAGTAGTGAAAAGCTTAGA TGAGTACGGATACCTCATTTGAAACTCAGCCTAGTAAGGAAGTGAAAACTTAGCAGTCAGTGACATGGGGAAATAGTTATAGAAAATGTC ACTGAATTTTTTCATATTTATAATTAGTCATTTACATATTTTTGTCTTGTTGATCATTACCTGTAAATGAAAGACCTTAATAGGAAAAAA AGAGTAAAGCTCAGTGTGAATGCAAACATCCACAAAATATGATCTTCGTTTATATTCTGTGATGTTGTTTATAAATGAATGCCTCAGTTC TCTGCTACCCTTTTCACAGCTTTGTACTGTTTGCCTTATATTCTATTTGTGCTTTTAAAGTGTGTCTGTTGGGAAAACAAAATGTGTAGG TGGTTTGTAAGTGAATAATTTTTATTTCTTCTTGTATTAAAATTTTGTTTTTTTCTCTACTTTGGGAGATGTTTATTTACATTGTCAGAC TATTCACAAAACAGATTCTAAAATTTGTTTGCTCGTATGCTGTTCCCTTCAATGTGATATCAGAGATTACTATGAATGTTAGTTTCATTC CGTGAAACATTACTTCCATATAAAGACAGATCTCTTAATAAGTGAATCTAGTGGAAGAACATAGGTATCATTCTAATTCCATGGTAAATT TTGTCATGATTCTATATGAATAATGGGGTCCTTCAGGAAGTTGGAATTTTTGCCTTCTCTTTTAATTGCAGTGAAGTTCTCTTTATAACT TCTAAAATTCGGAATTCTAGATCCTTGCTTTTGCAGAATTTGGTGCTCAGACAATATTTAAGGACATTTCAGCGAGACAAAGTGCATGTT TTTATCGAGTACCCTGTGCACCACATTATATCTGGCAATTCTTTTTGTTTCATTATGTGCATCAATATTTTTCTCAGCTACTATTACCTG AAACTTGTTTAACATGTATTAGACCTAGAATTTTCATTTTCTTTCTCACATAGTTGCTTCCTGGTATCTGATTTAGAAATAACATTTAAA TGCCAAGTATCTGGGGGATTGAAGGAAGGGTCTATATGAGCAGGTGAATTAGCAGTACTGTTTTTGTTTAGTGGATATTGTTAGTGACTT TTTGTGTGTGTTTTGCTTTGGGACCTTTTTATTTTGGTGTTGCAAAAAGTAACATATTTTCATCATTGCTTCATACGACATGGAGTTAGG ACAGGGAAAAATCATTCAACACTCCTTATGCATTAAATGATCAAATAAACCAGTGTAGGATATTAAGACTATCAATTGGTGGGATTAGGC TTGACATTTTATTTTTATAAATATATATTTTTTCTGAATGTGTCTGAGTCCAAGAGTGGGCAAAAAATAATTTTCTACTTTGGACTAATC TATAGAGGTTTTTGAAAGTCTGCATTACTAACTTGTTGAATTCATGATATTCTGCCTATGGCACAAATTGTAAACCTTTGTTTTTCTAAA >In-frame_ENST00000575744_ENST00000299608_TCGA-IN-8462-11A_FOPNL_chr16_15967347_-_TMX3_chr18_66369027_length(amino acids)=449AA_start in transcript=18_stop in transcript=1367 MATVAELKAESGQPVVPLDRQFLIHELNAFEESKDNTIPLLYGILAHFLRGTKDGIQNAFLKGPSLQPSDPSLGRQPSRRKPMGIASEFG VRGYPTIKLLKGDLAYNYRGPRTKDDIIEFAHRVSGALIRPLPSQQMFEHMQKRHRVFFVYVGGESPLKEKYIDAASELIVYTYFFSASE EVVPEYVTLKEMPAVLVFKDETYFVYDEYEDGDLSSWINRERFQNYLAMDGFLLYELGDTGKLVALAVIDEKNTSVEHTRLKSIIQEVAR DYRDLFHRDFQFGHMDGNDYINTLLMDELTVPTVVVLNTSNQQYFLLDRQIKNVEDMVQFINNILDGTVEAQGGDSILQRLKRIVFDAKS -------------------------------------------------------------- >In-frame_ENST00000573429_ENST00000299608_TCGA-IN-8462-11A_FOPNL_chr16_15967347_-_TMX3_chr18_66369027_length(transcript)=4894nt_BP=549nt CGCGGTGCGGCCCTGGCGGCCGTTGAAAAATGGCGACTGTGGCAGAGTTGAAGGCTGTTTTAAAGGACACCTTGGAAAAAAAGGGGGTAT TAGGGCATTTAAAAGCAAGGATCCGAGCTGAAGTTTTCAATGCCCTAGATGATGACCGTGAACCCCGACCATCATTGTCTCATGAAAACC TTCTAATTAATGAATTAATTCGAGAGTATTTAGAATTCAACAAATATAAGTATACAGCATCTGTCCTCATAGCAGCTCACTGCATCCTCC GCCTCCTGGGTTCAAGCAGTTCTCCTGCCTCAGCCTCCCGAGTACCTGGAACTACAGAATCTGGTCAACCTGTAGTTCCGTTGGACAGAC AGTTTCTCATCCATGAACTAAATGCATTTGAAGAATCAAAGGATAATACAATACCTCTTTTATATGGGATTTTAGCCCATTTCTTGCGTG GAACTAAGGATGGCATCCAGAATGCATTTCTGAAAGGGCCTTCACTTCAGCCTTCAGACCCAAGTCTTGGCAGACAACCTAGTAGAAGAA AGCCAATGGGCATTGCTTCAGAGTTTGGAGTTCGAGGTTATCCAACAATTAAGCTATTAAAAGGGGACTTGGCATATAATTATAGAGGAC CACGAACAAAAGATGATATTATTGAGTTTGCTCACAGAGTATCTGGGGCTCTAATTCGGCCACTTCCAAGTCAACAAATGTTTGAACATA TGCAGAAGAGACACCGTGTATTTTTCGTTTATGTAGGTGGAGAATCACCTTTGAAAGAGAAATACATAGATGCTGCTTCAGAATTGATTG TATATACATACTTCTTTTCTGCCTCAGAAGAAGTGGTTCCTGAGTATGTGACACTAAAAGAGATGCCAGCTGTGCTTGTTTTCAAAGATG AAACTTACTTTGTTTATGATGAGTATGAAGATGGTGATCTGTCATCATGGATCAACAGGGAAAGGTTTCAGAATTACCTTGCTATGGATG GCTTCCTCTTGTATGAACTTGGAGACACAGGAAAGCTTGTGGCTCTTGCAGTTATTGATGAGAAAAATACATCAGTTGAACATACCAGAT TGAAGTCAATTATTCAGGAAGTTGCAAGAGATTACAGAGACCTCTTCCATAGGGATTTTCAGTTTGGCCACATGGATGGAAATGACTACA TAAATACCTTGCTGATGGATGAATTGACAGTCCCAACTGTAGTTGTACTGAATACTTCAAACCAGCAATATTTCTTGCTAGATAGACAGA TTAAGAATGTTGAAGACATGGTCCAGTTTATTAATAACATTTTGGATGGCACAGTAGAAGCCCAAGGAGGTGATAGCATTTTGCAGAGAT TGAAAAGAATAGTATTTGATGCCAAATCTACTATTGTGTCTATATTCAAGAGCTCACCACTGATGGGCTGCTTTCTCTTTGGCCTGCCAC TGGGTGTCATCAGTATCATGTGCTATGGAATCTACACAGCCGACACAGATGGAGGTTATATAGAAGAACGATATGAAGTGTCTAAAAGTG AAAATGAAAACCAAGAACAGATAGAAGAGAGCAAAGAACAGCAGGAGCCCAGCAGTGGAGGATCTGTAGTGCCTACAGTGCAGGAGCCCA AGGATGTATTAGAAAAGAAGAAAGATTGAGACTTGATGACTATAAAATATTTGTTAGGACTTCAAATTATTAAAGAGTCTATTTATTGAA TTTAGACATTTAATCATGATCTTTACAGAAAAGAACATGTTATTCGTATTTTGCTAATATCAACTGCATGGATTAAAGTAGTCCCTCCAT ACATGGGGAAGTGTTTGGAGCAAAGAGATGAACAGTTTGTCTGAAACAAACACAGAGCACTCCATCAAAATTTACCTGATCTTTGTGATT AGAACAGAACAATTCTATTTGCATGTTTCTCTATCTGAATATTCTGTGACAAAAAGTTAAGATTCTTGGGCAGAATATTTAAATTGGTCA GTCAGGTAGAAGATACATGTGTGATATAGAAAAATAATGCCTCTCCTGCTGCCATCCGTTTCCCTCATATATTTTGGACAAGATTTATAT GGACAAAATTAAGTCTTTAAAATTTAGGCACTTTAAGGAGAACTAATAACTTTTTCCATGTATCAAGATTATGAGGTTAAAAATAATGTG GTTTTATATAGCATAGTGGTTTTATTTTGTTAGTTATTTTTAAAGGAGAAGAAATGTTACTTTTTAACTTTATACTCAGTTGCATTATCA TAAAATTTTCATATATGCCTAGATAATGGGGAAAAAAAGTCTTGTGATTGACTTTCGCAAAATAAACAGGATTTACTGAGTAGAGGTTTC AGCCCATTCCTTGGAATACTAACAGGTATTTCATCAGTCATTGTAGGTTGGGAAGGGTCTCTGTTAATCCTACTCTGCTTTAGCCAGAAT AGCCTAGTATTTTATTTCTATTTTATATATTGAGATTTCTTCTAACATTTCCTTTGATAAAAATCTTCTGCTTTTTGAAAAGTGGTATGT ATCATATTTTTATGTTTCTGGTGTGTGAACTTTATGGTAACTTCTACTCTAGAATACGTACGTATGCACCCACAGACACACACAGTTTAT TGACACATCTATTATGTAATGCTGTAGACCTGTCCGTGTCTGCTTCATAAGGAGTAACGACTGACATTAGCATGTCCAGTGACAAGTCAC ATCCGGTGTAAAAAAAAGAGATCAGCCAGTTACCTTCTCCATTGTCTTAGTTCTGTCACCCATTTCGTCAAGTGACCTCTCATCTTCTAT AAACTAATACAGGAATTCTTTCCAAAGCAATGTCTAAAAACTCTTTTTTTTAAAGTAACAGTTTGGTATGTTTATTGTAGATAAATTATT TTTGAGGCCTTCATTTTAGCTAAGTTTAGAATTTATATTAGGCAACTATGATTTGAGTGGTTATTCATTGAGTAATTTTCCACTATAAAG AATTTTATTGAACATTTATTAAAAAATAATGTAATGCATGGTCAAAAAATATGTAATTCATGGTCTGGACACTGACGTTGTTTAGGGATT TAGTCATCAAGGACAGCCCTCTGTTGTTTCTAATGCCGTACTAATCAAGACTGTATGGACACTTGCATCTTAAGTACTAAGGAATTACTA GTGATTGTTTTATTTTATCCATGTACTCTTTTAGTATTTAATAATTAAATACCTATTCTTAGTGTTTGACACTCCATATTTCTTTTTTTT GGAAATGAAACAAATATGCAGTCCAAAATTCAGGAACTACTAGAGTGAAATGATATTAAGTGGAAACCAGAGATAAATGCTGTTAATTTA ACAAGTAGATTCTTCTCCAAAGAATGATGAGTGATTCTTGGGAAGATAAATGTTAATGTTCCCAATAGTCAAGCTTGTTTTGCAGTAGTG AAAAGCTTAGATGAGTACGGATACCTCATTTGAAACTCAGCCTAGTAAGGAAGTGAAAACTTAGCAGTCAGTGACATGGGGAAATAGTTA TAGAAAATGTCACTGAATTTTTTCATATTTATAATTAGTCATTTACATATTTTTGTCTTGTTGATCATTACCTGTAAATGAAAGACCTTA ATAGGAAAAAAAGAGTAAAGCTCAGTGTGAATGCAAACATCCACAAAATATGATCTTCGTTTATATTCTGTGATGTTGTTTATAAATGAA TGCCTCAGTTCTCTGCTACCCTTTTCACAGCTTTGTACTGTTTGCCTTATATTCTATTTGTGCTTTTAAAGTGTGTCTGTTGGGAAAACA AAATGTGTAGGTGGTTTGTAAGTGAATAATTTTTATTTCTTCTTGTATTAAAATTTTGTTTTTTTCTCTACTTTGGGAGATGTTTATTTA CATTGTCAGACTATTCACAAAACAGATTCTAAAATTTGTTTGCTCGTATGCTGTTCCCTTCAATGTGATATCAGAGATTACTATGAATGT TAGTTTCATTCCGTGAAACATTACTTCCATATAAAGACAGATCTCTTAATAAGTGAATCTAGTGGAAGAACATAGGTATCATTCTAATTC CATGGTAAATTTTGTCATGATTCTATATGAATAATGGGGTCCTTCAGGAAGTTGGAATTTTTGCCTTCTCTTTTAATTGCAGTGAAGTTC TCTTTATAACTTCTAAAATTCGGAATTCTAGATCCTTGCTTTTGCAGAATTTGGTGCTCAGACAATATTTAAGGACATTTCAGCGAGACA AAGTGCATGTTTTTATCGAGTACCCTGTGCACCACATTATATCTGGCAATTCTTTTTGTTTCATTATGTGCATCAATATTTTTCTCAGCT ACTATTACCTGAAACTTGTTTAACATGTATTAGACCTAGAATTTTCATTTTCTTTCTCACATAGTTGCTTCCTGGTATCTGATTTAGAAA TAACATTTAAATGCCAAGTATCTGGGGGATTGAAGGAAGGGTCTATATGAGCAGGTGAATTAGCAGTACTGTTTTTGTTTAGTGGATATT GTTAGTGACTTTTTGTGTGTGTTTTGCTTTGGGACCTTTTTATTTTGGTGTTGCAAAAAGTAACATATTTTCATCATTGCTTCATACGAC ATGGAGTTAGGACAGGGAAAAATCATTCAACACTCCTTATGCATTAAATGATCAAATAAACCAGTGTAGGATATTAAGACTATCAATTGG TGGGATTAGGCTTGACATTTTATTTTTATAAATATATATTTTTTCTGAATGTGTCTGAGTCCAAGAGTGGGCAAAAAATAATTTTCTACT TTGGACTAATCTATAGAGGTTTTTGAAAGTCTGCATTACTAACTTGTTGAATTCATGATATTCTGCCTATGGCACAAATTGTAAACCTTT >In-frame_ENST00000573429_ENST00000299608_TCGA-IN-8462-11A_FOPNL_chr16_15967347_-_TMX3_chr18_66369027_length(amino acids)=539AA_start in transcript=29_stop in transcript=1648 MATVAELKAVLKDTLEKKGVLGHLKARIRAEVFNALDDDREPRPSLSHENLLINELIREYLEFNKYKYTASVLIAAHCILRLLGSSSSPA SASRVPGTTESGQPVVPLDRQFLIHELNAFEESKDNTIPLLYGILAHFLRGTKDGIQNAFLKGPSLQPSDPSLGRQPSRRKPMGIASEFG VRGYPTIKLLKGDLAYNYRGPRTKDDIIEFAHRVSGALIRPLPSQQMFEHMQKRHRVFFVYVGGESPLKEKYIDAASELIVYTYFFSASE EVVPEYVTLKEMPAVLVFKDETYFVYDEYEDGDLSSWINRERFQNYLAMDGFLLYELGDTGKLVALAVIDEKNTSVEHTRLKSIIQEVAR DYRDLFHRDFQFGHMDGNDYINTLLMDELTVPTVVVLNTSNQQYFLLDRQIKNVEDMVQFINNILDGTVEAQGGDSILQRLKRIVFDAKS -------------------------------------------------------------- >In-frame_ENST00000255759_ENST00000299608_TCGA-IN-8462-11A_FOPNL_chr16_15967348_-_TMX3_chr18_66369027_length(transcript)=4823nt_BP=478nt CCGCGGTGCGGCCCTGGCGGCCGTTGAAAAATGGCGACTGTGGCAGAGTTGAAGGCTGTTTTAAAGGACACCTTGGAAAAAAAGGGGGTA TTAGGGCATTTAAAAGCAAGGATCCGAGCTGAAGTTTTCAATGCCCTAGATGATGACCGTGAACCCCGACCATCATTGTCTCATGAAAAC CTTCTAATTAATGAATTAATTCGAGAGTATTTAGAATTCAACAAATATAAGTATACAGCATCTGTCCTCATAGCAGAATCTGGTCAACCT GTAGTTCCGTTGGACAGACAGTTTCTCATCCATGAACTAAATGCATTTGAAGAATCAAAGGATAATACAATACCTCTTTTATATGGGATT TTAGCCCATTTCTTGCGTGGAACTAAGGATGGCATCCAGAATGCATTTCTGAAAGGGCCTTCACTTCAGCCTTCAGACCCAAGTCTTGGC AGACAACCTAGTAGAAGAAAGCCAATGGGCATTGCTTCAGAGTTTGGAGTTCGAGGTTATCCAACAATTAAGCTATTAAAAGGGGACTTG GCATATAATTATAGAGGACCACGAACAAAAGATGATATTATTGAGTTTGCTCACAGAGTATCTGGGGCTCTAATTCGGCCACTTCCAAGT CAACAAATGTTTGAACATATGCAGAAGAGACACCGTGTATTTTTCGTTTATGTAGGTGGAGAATCACCTTTGAAAGAGAAATACATAGAT GCTGCTTCAGAATTGATTGTATATACATACTTCTTTTCTGCCTCAGAAGAAGTGGTTCCTGAGTATGTGACACTAAAAGAGATGCCAGCT GTGCTTGTTTTCAAAGATGAAACTTACTTTGTTTATGATGAGTATGAAGATGGTGATCTGTCATCATGGATCAACAGGGAAAGGTTTCAG AATTACCTTGCTATGGATGGCTTCCTCTTGTATGAACTTGGAGACACAGGAAAGCTTGTGGCTCTTGCAGTTATTGATGAGAAAAATACA TCAGTTGAACATACCAGATTGAAGTCAATTATTCAGGAAGTTGCAAGAGATTACAGAGACCTCTTCCATAGGGATTTTCAGTTTGGCCAC ATGGATGGAAATGACTACATAAATACCTTGCTGATGGATGAATTGACAGTCCCAACTGTAGTTGTACTGAATACTTCAAACCAGCAATAT TTCTTGCTAGATAGACAGATTAAGAATGTTGAAGACATGGTCCAGTTTATTAATAACATTTTGGATGGCACAGTAGAAGCCCAAGGAGGT GATAGCATTTTGCAGAGATTGAAAAGAATAGTATTTGATGCCAAATCTACTATTGTGTCTATATTCAAGAGCTCACCACTGATGGGCTGC TTTCTCTTTGGCCTGCCACTGGGTGTCATCAGTATCATGTGCTATGGAATCTACACAGCCGACACAGATGGAGGTTATATAGAAGAACGA TATGAAGTGTCTAAAAGTGAAAATGAAAACCAAGAACAGATAGAAGAGAGCAAAGAACAGCAGGAGCCCAGCAGTGGAGGATCTGTAGTG CCTACAGTGCAGGAGCCCAAGGATGTATTAGAAAAGAAGAAAGATTGAGACTTGATGACTATAAAATATTTGTTAGGACTTCAAATTATT AAAGAGTCTATTTATTGAATTTAGACATTTAATCATGATCTTTACAGAAAAGAACATGTTATTCGTATTTTGCTAATATCAACTGCATGG ATTAAAGTAGTCCCTCCATACATGGGGAAGTGTTTGGAGCAAAGAGATGAACAGTTTGTCTGAAACAAACACAGAGCACTCCATCAAAAT TTACCTGATCTTTGTGATTAGAACAGAACAATTCTATTTGCATGTTTCTCTATCTGAATATTCTGTGACAAAAAGTTAAGATTCTTGGGC AGAATATTTAAATTGGTCAGTCAGGTAGAAGATACATGTGTGATATAGAAAAATAATGCCTCTCCTGCTGCCATCCGTTTCCCTCATATA TTTTGGACAAGATTTATATGGACAAAATTAAGTCTTTAAAATTTAGGCACTTTAAGGAGAACTAATAACTTTTTCCATGTATCAAGATTA TGAGGTTAAAAATAATGTGGTTTTATATAGCATAGTGGTTTTATTTTGTTAGTTATTTTTAAAGGAGAAGAAATGTTACTTTTTAACTTT ATACTCAGTTGCATTATCATAAAATTTTCATATATGCCTAGATAATGGGGAAAAAAAGTCTTGTGATTGACTTTCGCAAAATAAACAGGA TTTACTGAGTAGAGGTTTCAGCCCATTCCTTGGAATACTAACAGGTATTTCATCAGTCATTGTAGGTTGGGAAGGGTCTCTGTTAATCCT ACTCTGCTTTAGCCAGAATAGCCTAGTATTTTATTTCTATTTTATATATTGAGATTTCTTCTAACATTTCCTTTGATAAAAATCTTCTGC TTTTTGAAAAGTGGTATGTATCATATTTTTATGTTTCTGGTGTGTGAACTTTATGGTAACTTCTACTCTAGAATACGTACGTATGCACCC ACAGACACACACAGTTTATTGACACATCTATTATGTAATGCTGTAGACCTGTCCGTGTCTGCTTCATAAGGAGTAACGACTGACATTAGC ATGTCCAGTGACAAGTCACATCCGGTGTAAAAAAAAGAGATCAGCCAGTTACCTTCTCCATTGTCTTAGTTCTGTCACCCATTTCGTCAA GTGACCTCTCATCTTCTATAAACTAATACAGGAATTCTTTCCAAAGCAATGTCTAAAAACTCTTTTTTTTAAAGTAACAGTTTGGTATGT TTATTGTAGATAAATTATTTTTGAGGCCTTCATTTTAGCTAAGTTTAGAATTTATATTAGGCAACTATGATTTGAGTGGTTATTCATTGA GTAATTTTCCACTATAAAGAATTTTATTGAACATTTATTAAAAAATAATGTAATGCATGGTCAAAAAATATGTAATTCATGGTCTGGACA CTGACGTTGTTTAGGGATTTAGTCATCAAGGACAGCCCTCTGTTGTTTCTAATGCCGTACTAATCAAGACTGTATGGACACTTGCATCTT AAGTACTAAGGAATTACTAGTGATTGTTTTATTTTATCCATGTACTCTTTTAGTATTTAATAATTAAATACCTATTCTTAGTGTTTGACA CTCCATATTTCTTTTTTTTGGAAATGAAACAAATATGCAGTCCAAAATTCAGGAACTACTAGAGTGAAATGATATTAAGTGGAAACCAGA GATAAATGCTGTTAATTTAACAAGTAGATTCTTCTCCAAAGAATGATGAGTGATTCTTGGGAAGATAAATGTTAATGTTCCCAATAGTCA AGCTTGTTTTGCAGTAGTGAAAAGCTTAGATGAGTACGGATACCTCATTTGAAACTCAGCCTAGTAAGGAAGTGAAAACTTAGCAGTCAG TGACATGGGGAAATAGTTATAGAAAATGTCACTGAATTTTTTCATATTTATAATTAGTCATTTACATATTTTTGTCTTGTTGATCATTAC CTGTAAATGAAAGACCTTAATAGGAAAAAAAGAGTAAAGCTCAGTGTGAATGCAAACATCCACAAAATATGATCTTCGTTTATATTCTGT GATGTTGTTTATAAATGAATGCCTCAGTTCTCTGCTACCCTTTTCACAGCTTTGTACTGTTTGCCTTATATTCTATTTGTGCTTTTAAAG TGTGTCTGTTGGGAAAACAAAATGTGTAGGTGGTTTGTAAGTGAATAATTTTTATTTCTTCTTGTATTAAAATTTTGTTTTTTTCTCTAC TTTGGGAGATGTTTATTTACATTGTCAGACTATTCACAAAACAGATTCTAAAATTTGTTTGCTCGTATGCTGTTCCCTTCAATGTGATAT CAGAGATTACTATGAATGTTAGTTTCATTCCGTGAAACATTACTTCCATATAAAGACAGATCTCTTAATAAGTGAATCTAGTGGAAGAAC ATAGGTATCATTCTAATTCCATGGTAAATTTTGTCATGATTCTATATGAATAATGGGGTCCTTCAGGAAGTTGGAATTTTTGCCTTCTCT TTTAATTGCAGTGAAGTTCTCTTTATAACTTCTAAAATTCGGAATTCTAGATCCTTGCTTTTGCAGAATTTGGTGCTCAGACAATATTTA AGGACATTTCAGCGAGACAAAGTGCATGTTTTTATCGAGTACCCTGTGCACCACATTATATCTGGCAATTCTTTTTGTTTCATTATGTGC ATCAATATTTTTCTCAGCTACTATTACCTGAAACTTGTTTAACATGTATTAGACCTAGAATTTTCATTTTCTTTCTCACATAGTTGCTTC CTGGTATCTGATTTAGAAATAACATTTAAATGCCAAGTATCTGGGGGATTGAAGGAAGGGTCTATATGAGCAGGTGAATTAGCAGTACTG TTTTTGTTTAGTGGATATTGTTAGTGACTTTTTGTGTGTGTTTTGCTTTGGGACCTTTTTATTTTGGTGTTGCAAAAAGTAACATATTTT CATCATTGCTTCATACGACATGGAGTTAGGACAGGGAAAAATCATTCAACACTCCTTATGCATTAAATGATCAAATAAACCAGTGTAGGA TATTAAGACTATCAATTGGTGGGATTAGGCTTGACATTTTATTTTTATAAATATATATTTTTTCTGAATGTGTCTGAGTCCAAGAGTGGG CAAAAAATAATTTTCTACTTTGGACTAATCTATAGAGGTTTTTGAAAGTCTGCATTACTAACTTGTTGAATTCATGATATTCTGCCTATG >In-frame_ENST00000255759_ENST00000299608_TCGA-IN-8462-11A_FOPNL_chr16_15967348_-_TMX3_chr18_66369027_length(amino acids)=515AA_start in transcript=30_stop in transcript=1577 MATVAELKAVLKDTLEKKGVLGHLKARIRAEVFNALDDDREPRPSLSHENLLINELIREYLEFNKYKYTASVLIAESGQPVVPLDRQFLI HELNAFEESKDNTIPLLYGILAHFLRGTKDGIQNAFLKGPSLQPSDPSLGRQPSRRKPMGIASEFGVRGYPTIKLLKGDLAYNYRGPRTK DDIIEFAHRVSGALIRPLPSQQMFEHMQKRHRVFFVYVGGESPLKEKYIDAASELIVYTYFFSASEEVVPEYVTLKEMPAVLVFKDETYF VYDEYEDGDLSSWINRERFQNYLAMDGFLLYELGDTGKLVALAVIDEKNTSVEHTRLKSIIQEVARDYRDLFHRDFQFGHMDGNDYINTL LMDELTVPTVVVLNTSNQQYFLLDRQIKNVEDMVQFINNILDGTVEAQGGDSILQRLKRIVFDAKSTIVSIFKSSPLMGCFLFGLPLGVI -------------------------------------------------------------- >In-frame_ENST00000575744_ENST00000299608_TCGA-IN-8462-11A_FOPNL_chr16_15967348_-_TMX3_chr18_66369027_length(transcript)=4613nt_BP=268nt CCTGGCGGCCGTTGAAAAATGGCGACTGTGGCAGAGTTGAAGGCTGAATCTGGTCAACCTGTAGTTCCGTTGGACAGACAGTTTCTCATC CATGAACTAAATGCATTTGAAGAATCAAAGGATAATACAATACCTCTTTTATATGGGATTTTAGCCCATTTCTTGCGTGGAACTAAGGAT GGCATCCAGAATGCATTTCTGAAAGGGCCTTCACTTCAGCCTTCAGACCCAAGTCTTGGCAGACAACCTAGTAGAAGAAAGCCAATGGGC ATTGCTTCAGAGTTTGGAGTTCGAGGTTATCCAACAATTAAGCTATTAAAAGGGGACTTGGCATATAATTATAGAGGACCACGAACAAAA GATGATATTATTGAGTTTGCTCACAGAGTATCTGGGGCTCTAATTCGGCCACTTCCAAGTCAACAAATGTTTGAACATATGCAGAAGAGA CACCGTGTATTTTTCGTTTATGTAGGTGGAGAATCACCTTTGAAAGAGAAATACATAGATGCTGCTTCAGAATTGATTGTATATACATAC TTCTTTTCTGCCTCAGAAGAAGTGGTTCCTGAGTATGTGACACTAAAAGAGATGCCAGCTGTGCTTGTTTTCAAAGATGAAACTTACTTT GTTTATGATGAGTATGAAGATGGTGATCTGTCATCATGGATCAACAGGGAAAGGTTTCAGAATTACCTTGCTATGGATGGCTTCCTCTTG TATGAACTTGGAGACACAGGAAAGCTTGTGGCTCTTGCAGTTATTGATGAGAAAAATACATCAGTTGAACATACCAGATTGAAGTCAATT ATTCAGGAAGTTGCAAGAGATTACAGAGACCTCTTCCATAGGGATTTTCAGTTTGGCCACATGGATGGAAATGACTACATAAATACCTTG CTGATGGATGAATTGACAGTCCCAACTGTAGTTGTACTGAATACTTCAAACCAGCAATATTTCTTGCTAGATAGACAGATTAAGAATGTT GAAGACATGGTCCAGTTTATTAATAACATTTTGGATGGCACAGTAGAAGCCCAAGGAGGTGATAGCATTTTGCAGAGATTGAAAAGAATA GTATTTGATGCCAAATCTACTATTGTGTCTATATTCAAGAGCTCACCACTGATGGGCTGCTTTCTCTTTGGCCTGCCACTGGGTGTCATC AGTATCATGTGCTATGGAATCTACACAGCCGACACAGATGGAGGTTATATAGAAGAACGATATGAAGTGTCTAAAAGTGAAAATGAAAAC CAAGAACAGATAGAAGAGAGCAAAGAACAGCAGGAGCCCAGCAGTGGAGGATCTGTAGTGCCTACAGTGCAGGAGCCCAAGGATGTATTA GAAAAGAAGAAAGATTGAGACTTGATGACTATAAAATATTTGTTAGGACTTCAAATTATTAAAGAGTCTATTTATTGAATTTAGACATTT AATCATGATCTTTACAGAAAAGAACATGTTATTCGTATTTTGCTAATATCAACTGCATGGATTAAAGTAGTCCCTCCATACATGGGGAAG TGTTTGGAGCAAAGAGATGAACAGTTTGTCTGAAACAAACACAGAGCACTCCATCAAAATTTACCTGATCTTTGTGATTAGAACAGAACA ATTCTATTTGCATGTTTCTCTATCTGAATATTCTGTGACAAAAAGTTAAGATTCTTGGGCAGAATATTTAAATTGGTCAGTCAGGTAGAA GATACATGTGTGATATAGAAAAATAATGCCTCTCCTGCTGCCATCCGTTTCCCTCATATATTTTGGACAAGATTTATATGGACAAAATTA AGTCTTTAAAATTTAGGCACTTTAAGGAGAACTAATAACTTTTTCCATGTATCAAGATTATGAGGTTAAAAATAATGTGGTTTTATATAG CATAGTGGTTTTATTTTGTTAGTTATTTTTAAAGGAGAAGAAATGTTACTTTTTAACTTTATACTCAGTTGCATTATCATAAAATTTTCA TATATGCCTAGATAATGGGGAAAAAAAGTCTTGTGATTGACTTTCGCAAAATAAACAGGATTTACTGAGTAGAGGTTTCAGCCCATTCCT TGGAATACTAACAGGTATTTCATCAGTCATTGTAGGTTGGGAAGGGTCTCTGTTAATCCTACTCTGCTTTAGCCAGAATAGCCTAGTATT TTATTTCTATTTTATATATTGAGATTTCTTCTAACATTTCCTTTGATAAAAATCTTCTGCTTTTTGAAAAGTGGTATGTATCATATTTTT ATGTTTCTGGTGTGTGAACTTTATGGTAACTTCTACTCTAGAATACGTACGTATGCACCCACAGACACACACAGTTTATTGACACATCTA TTATGTAATGCTGTAGACCTGTCCGTGTCTGCTTCATAAGGAGTAACGACTGACATTAGCATGTCCAGTGACAAGTCACATCCGGTGTAA AAAAAAGAGATCAGCCAGTTACCTTCTCCATTGTCTTAGTTCTGTCACCCATTTCGTCAAGTGACCTCTCATCTTCTATAAACTAATACA GGAATTCTTTCCAAAGCAATGTCTAAAAACTCTTTTTTTTAAAGTAACAGTTTGGTATGTTTATTGTAGATAAATTATTTTTGAGGCCTT CATTTTAGCTAAGTTTAGAATTTATATTAGGCAACTATGATTTGAGTGGTTATTCATTGAGTAATTTTCCACTATAAAGAATTTTATTGA ACATTTATTAAAAAATAATGTAATGCATGGTCAAAAAATATGTAATTCATGGTCTGGACACTGACGTTGTTTAGGGATTTAGTCATCAAG GACAGCCCTCTGTTGTTTCTAATGCCGTACTAATCAAGACTGTATGGACACTTGCATCTTAAGTACTAAGGAATTACTAGTGATTGTTTT ATTTTATCCATGTACTCTTTTAGTATTTAATAATTAAATACCTATTCTTAGTGTTTGACACTCCATATTTCTTTTTTTTGGAAATGAAAC AAATATGCAGTCCAAAATTCAGGAACTACTAGAGTGAAATGATATTAAGTGGAAACCAGAGATAAATGCTGTTAATTTAACAAGTAGATT CTTCTCCAAAGAATGATGAGTGATTCTTGGGAAGATAAATGTTAATGTTCCCAATAGTCAAGCTTGTTTTGCAGTAGTGAAAAGCTTAGA TGAGTACGGATACCTCATTTGAAACTCAGCCTAGTAAGGAAGTGAAAACTTAGCAGTCAGTGACATGGGGAAATAGTTATAGAAAATGTC ACTGAATTTTTTCATATTTATAATTAGTCATTTACATATTTTTGTCTTGTTGATCATTACCTGTAAATGAAAGACCTTAATAGGAAAAAA AGAGTAAAGCTCAGTGTGAATGCAAACATCCACAAAATATGATCTTCGTTTATATTCTGTGATGTTGTTTATAAATGAATGCCTCAGTTC TCTGCTACCCTTTTCACAGCTTTGTACTGTTTGCCTTATATTCTATTTGTGCTTTTAAAGTGTGTCTGTTGGGAAAACAAAATGTGTAGG TGGTTTGTAAGTGAATAATTTTTATTTCTTCTTGTATTAAAATTTTGTTTTTTTCTCTACTTTGGGAGATGTTTATTTACATTGTCAGAC TATTCACAAAACAGATTCTAAAATTTGTTTGCTCGTATGCTGTTCCCTTCAATGTGATATCAGAGATTACTATGAATGTTAGTTTCATTC CGTGAAACATTACTTCCATATAAAGACAGATCTCTTAATAAGTGAATCTAGTGGAAGAACATAGGTATCATTCTAATTCCATGGTAAATT TTGTCATGATTCTATATGAATAATGGGGTCCTTCAGGAAGTTGGAATTTTTGCCTTCTCTTTTAATTGCAGTGAAGTTCTCTTTATAACT TCTAAAATTCGGAATTCTAGATCCTTGCTTTTGCAGAATTTGGTGCTCAGACAATATTTAAGGACATTTCAGCGAGACAAAGTGCATGTT TTTATCGAGTACCCTGTGCACCACATTATATCTGGCAATTCTTTTTGTTTCATTATGTGCATCAATATTTTTCTCAGCTACTATTACCTG AAACTTGTTTAACATGTATTAGACCTAGAATTTTCATTTTCTTTCTCACATAGTTGCTTCCTGGTATCTGATTTAGAAATAACATTTAAA TGCCAAGTATCTGGGGGATTGAAGGAAGGGTCTATATGAGCAGGTGAATTAGCAGTACTGTTTTTGTTTAGTGGATATTGTTAGTGACTT TTTGTGTGTGTTTTGCTTTGGGACCTTTTTATTTTGGTGTTGCAAAAAGTAACATATTTTCATCATTGCTTCATACGACATGGAGTTAGG ACAGGGAAAAATCATTCAACACTCCTTATGCATTAAATGATCAAATAAACCAGTGTAGGATATTAAGACTATCAATTGGTGGGATTAGGC TTGACATTTTATTTTTATAAATATATATTTTTTCTGAATGTGTCTGAGTCCAAGAGTGGGCAAAAAATAATTTTCTACTTTGGACTAATC TATAGAGGTTTTTGAAAGTCTGCATTACTAACTTGTTGAATTCATGATATTCTGCCTATGGCACAAATTGTAAACCTTTGTTTTTCTAAA >In-frame_ENST00000575744_ENST00000299608_TCGA-IN-8462-11A_FOPNL_chr16_15967348_-_TMX3_chr18_66369027_length(amino acids)=449AA_start in transcript=18_stop in transcript=1367 MATVAELKAESGQPVVPLDRQFLIHELNAFEESKDNTIPLLYGILAHFLRGTKDGIQNAFLKGPSLQPSDPSLGRQPSRRKPMGIASEFG VRGYPTIKLLKGDLAYNYRGPRTKDDIIEFAHRVSGALIRPLPSQQMFEHMQKRHRVFFVYVGGESPLKEKYIDAASELIVYTYFFSASE EVVPEYVTLKEMPAVLVFKDETYFVYDEYEDGDLSSWINRERFQNYLAMDGFLLYELGDTGKLVALAVIDEKNTSVEHTRLKSIIQEVAR DYRDLFHRDFQFGHMDGNDYINTLLMDELTVPTVVVLNTSNQQYFLLDRQIKNVEDMVQFINNILDGTVEAQGGDSILQRLKRIVFDAKS -------------------------------------------------------------- >In-frame_ENST00000573429_ENST00000299608_TCGA-IN-8462-11A_FOPNL_chr16_15967348_-_TMX3_chr18_66369027_length(transcript)=4894nt_BP=549nt CGCGGTGCGGCCCTGGCGGCCGTTGAAAAATGGCGACTGTGGCAGAGTTGAAGGCTGTTTTAAAGGACACCTTGGAAAAAAAGGGGGTAT TAGGGCATTTAAAAGCAAGGATCCGAGCTGAAGTTTTCAATGCCCTAGATGATGACCGTGAACCCCGACCATCATTGTCTCATGAAAACC TTCTAATTAATGAATTAATTCGAGAGTATTTAGAATTCAACAAATATAAGTATACAGCATCTGTCCTCATAGCAGCTCACTGCATCCTCC GCCTCCTGGGTTCAAGCAGTTCTCCTGCCTCAGCCTCCCGAGTACCTGGAACTACAGAATCTGGTCAACCTGTAGTTCCGTTGGACAGAC AGTTTCTCATCCATGAACTAAATGCATTTGAAGAATCAAAGGATAATACAATACCTCTTTTATATGGGATTTTAGCCCATTTCTTGCGTG GAACTAAGGATGGCATCCAGAATGCATTTCTGAAAGGGCCTTCACTTCAGCCTTCAGACCCAAGTCTTGGCAGACAACCTAGTAGAAGAA AGCCAATGGGCATTGCTTCAGAGTTTGGAGTTCGAGGTTATCCAACAATTAAGCTATTAAAAGGGGACTTGGCATATAATTATAGAGGAC CACGAACAAAAGATGATATTATTGAGTTTGCTCACAGAGTATCTGGGGCTCTAATTCGGCCACTTCCAAGTCAACAAATGTTTGAACATA TGCAGAAGAGACACCGTGTATTTTTCGTTTATGTAGGTGGAGAATCACCTTTGAAAGAGAAATACATAGATGCTGCTTCAGAATTGATTG TATATACATACTTCTTTTCTGCCTCAGAAGAAGTGGTTCCTGAGTATGTGACACTAAAAGAGATGCCAGCTGTGCTTGTTTTCAAAGATG AAACTTACTTTGTTTATGATGAGTATGAAGATGGTGATCTGTCATCATGGATCAACAGGGAAAGGTTTCAGAATTACCTTGCTATGGATG GCTTCCTCTTGTATGAACTTGGAGACACAGGAAAGCTTGTGGCTCTTGCAGTTATTGATGAGAAAAATACATCAGTTGAACATACCAGAT TGAAGTCAATTATTCAGGAAGTTGCAAGAGATTACAGAGACCTCTTCCATAGGGATTTTCAGTTTGGCCACATGGATGGAAATGACTACA TAAATACCTTGCTGATGGATGAATTGACAGTCCCAACTGTAGTTGTACTGAATACTTCAAACCAGCAATATTTCTTGCTAGATAGACAGA TTAAGAATGTTGAAGACATGGTCCAGTTTATTAATAACATTTTGGATGGCACAGTAGAAGCCCAAGGAGGTGATAGCATTTTGCAGAGAT TGAAAAGAATAGTATTTGATGCCAAATCTACTATTGTGTCTATATTCAAGAGCTCACCACTGATGGGCTGCTTTCTCTTTGGCCTGCCAC TGGGTGTCATCAGTATCATGTGCTATGGAATCTACACAGCCGACACAGATGGAGGTTATATAGAAGAACGATATGAAGTGTCTAAAAGTG AAAATGAAAACCAAGAACAGATAGAAGAGAGCAAAGAACAGCAGGAGCCCAGCAGTGGAGGATCTGTAGTGCCTACAGTGCAGGAGCCCA AGGATGTATTAGAAAAGAAGAAAGATTGAGACTTGATGACTATAAAATATTTGTTAGGACTTCAAATTATTAAAGAGTCTATTTATTGAA TTTAGACATTTAATCATGATCTTTACAGAAAAGAACATGTTATTCGTATTTTGCTAATATCAACTGCATGGATTAAAGTAGTCCCTCCAT ACATGGGGAAGTGTTTGGAGCAAAGAGATGAACAGTTTGTCTGAAACAAACACAGAGCACTCCATCAAAATTTACCTGATCTTTGTGATT AGAACAGAACAATTCTATTTGCATGTTTCTCTATCTGAATATTCTGTGACAAAAAGTTAAGATTCTTGGGCAGAATATTTAAATTGGTCA GTCAGGTAGAAGATACATGTGTGATATAGAAAAATAATGCCTCTCCTGCTGCCATCCGTTTCCCTCATATATTTTGGACAAGATTTATAT GGACAAAATTAAGTCTTTAAAATTTAGGCACTTTAAGGAGAACTAATAACTTTTTCCATGTATCAAGATTATGAGGTTAAAAATAATGTG GTTTTATATAGCATAGTGGTTTTATTTTGTTAGTTATTTTTAAAGGAGAAGAAATGTTACTTTTTAACTTTATACTCAGTTGCATTATCA TAAAATTTTCATATATGCCTAGATAATGGGGAAAAAAAGTCTTGTGATTGACTTTCGCAAAATAAACAGGATTTACTGAGTAGAGGTTTC AGCCCATTCCTTGGAATACTAACAGGTATTTCATCAGTCATTGTAGGTTGGGAAGGGTCTCTGTTAATCCTACTCTGCTTTAGCCAGAAT AGCCTAGTATTTTATTTCTATTTTATATATTGAGATTTCTTCTAACATTTCCTTTGATAAAAATCTTCTGCTTTTTGAAAAGTGGTATGT ATCATATTTTTATGTTTCTGGTGTGTGAACTTTATGGTAACTTCTACTCTAGAATACGTACGTATGCACCCACAGACACACACAGTTTAT TGACACATCTATTATGTAATGCTGTAGACCTGTCCGTGTCTGCTTCATAAGGAGTAACGACTGACATTAGCATGTCCAGTGACAAGTCAC ATCCGGTGTAAAAAAAAGAGATCAGCCAGTTACCTTCTCCATTGTCTTAGTTCTGTCACCCATTTCGTCAAGTGACCTCTCATCTTCTAT AAACTAATACAGGAATTCTTTCCAAAGCAATGTCTAAAAACTCTTTTTTTTAAAGTAACAGTTTGGTATGTTTATTGTAGATAAATTATT TTTGAGGCCTTCATTTTAGCTAAGTTTAGAATTTATATTAGGCAACTATGATTTGAGTGGTTATTCATTGAGTAATTTTCCACTATAAAG AATTTTATTGAACATTTATTAAAAAATAATGTAATGCATGGTCAAAAAATATGTAATTCATGGTCTGGACACTGACGTTGTTTAGGGATT TAGTCATCAAGGACAGCCCTCTGTTGTTTCTAATGCCGTACTAATCAAGACTGTATGGACACTTGCATCTTAAGTACTAAGGAATTACTA GTGATTGTTTTATTTTATCCATGTACTCTTTTAGTATTTAATAATTAAATACCTATTCTTAGTGTTTGACACTCCATATTTCTTTTTTTT GGAAATGAAACAAATATGCAGTCCAAAATTCAGGAACTACTAGAGTGAAATGATATTAAGTGGAAACCAGAGATAAATGCTGTTAATTTA ACAAGTAGATTCTTCTCCAAAGAATGATGAGTGATTCTTGGGAAGATAAATGTTAATGTTCCCAATAGTCAAGCTTGTTTTGCAGTAGTG AAAAGCTTAGATGAGTACGGATACCTCATTTGAAACTCAGCCTAGTAAGGAAGTGAAAACTTAGCAGTCAGTGACATGGGGAAATAGTTA TAGAAAATGTCACTGAATTTTTTCATATTTATAATTAGTCATTTACATATTTTTGTCTTGTTGATCATTACCTGTAAATGAAAGACCTTA ATAGGAAAAAAAGAGTAAAGCTCAGTGTGAATGCAAACATCCACAAAATATGATCTTCGTTTATATTCTGTGATGTTGTTTATAAATGAA TGCCTCAGTTCTCTGCTACCCTTTTCACAGCTTTGTACTGTTTGCCTTATATTCTATTTGTGCTTTTAAAGTGTGTCTGTTGGGAAAACA AAATGTGTAGGTGGTTTGTAAGTGAATAATTTTTATTTCTTCTTGTATTAAAATTTTGTTTTTTTCTCTACTTTGGGAGATGTTTATTTA CATTGTCAGACTATTCACAAAACAGATTCTAAAATTTGTTTGCTCGTATGCTGTTCCCTTCAATGTGATATCAGAGATTACTATGAATGT TAGTTTCATTCCGTGAAACATTACTTCCATATAAAGACAGATCTCTTAATAAGTGAATCTAGTGGAAGAACATAGGTATCATTCTAATTC CATGGTAAATTTTGTCATGATTCTATATGAATAATGGGGTCCTTCAGGAAGTTGGAATTTTTGCCTTCTCTTTTAATTGCAGTGAAGTTC TCTTTATAACTTCTAAAATTCGGAATTCTAGATCCTTGCTTTTGCAGAATTTGGTGCTCAGACAATATTTAAGGACATTTCAGCGAGACA AAGTGCATGTTTTTATCGAGTACCCTGTGCACCACATTATATCTGGCAATTCTTTTTGTTTCATTATGTGCATCAATATTTTTCTCAGCT ACTATTACCTGAAACTTGTTTAACATGTATTAGACCTAGAATTTTCATTTTCTTTCTCACATAGTTGCTTCCTGGTATCTGATTTAGAAA TAACATTTAAATGCCAAGTATCTGGGGGATTGAAGGAAGGGTCTATATGAGCAGGTGAATTAGCAGTACTGTTTTTGTTTAGTGGATATT GTTAGTGACTTTTTGTGTGTGTTTTGCTTTGGGACCTTTTTATTTTGGTGTTGCAAAAAGTAACATATTTTCATCATTGCTTCATACGAC ATGGAGTTAGGACAGGGAAAAATCATTCAACACTCCTTATGCATTAAATGATCAAATAAACCAGTGTAGGATATTAAGACTATCAATTGG TGGGATTAGGCTTGACATTTTATTTTTATAAATATATATTTTTTCTGAATGTGTCTGAGTCCAAGAGTGGGCAAAAAATAATTTTCTACT TTGGACTAATCTATAGAGGTTTTTGAAAGTCTGCATTACTAACTTGTTGAATTCATGATATTCTGCCTATGGCACAAATTGTAAACCTTT >In-frame_ENST00000573429_ENST00000299608_TCGA-IN-8462-11A_FOPNL_chr16_15967348_-_TMX3_chr18_66369027_length(amino acids)=539AA_start in transcript=29_stop in transcript=1648 MATVAELKAVLKDTLEKKGVLGHLKARIRAEVFNALDDDREPRPSLSHENLLINELIREYLEFNKYKYTASVLIAAHCILRLLGSSSSPA SASRVPGTTESGQPVVPLDRQFLIHELNAFEESKDNTIPLLYGILAHFLRGTKDGIQNAFLKGPSLQPSDPSLGRQPSRRKPMGIASEFG VRGYPTIKLLKGDLAYNYRGPRTKDDIIEFAHRVSGALIRPLPSQQMFEHMQKRHRVFFVYVGGESPLKEKYIDAASELIVYTYFFSASE EVVPEYVTLKEMPAVLVFKDETYFVYDEYEDGDLSSWINRERFQNYLAMDGFLLYELGDTGKLVALAVIDEKNTSVEHTRLKSIIQEVAR DYRDLFHRDFQFGHMDGNDYINTLLMDELTVPTVVVLNTSNQQYFLLDRQIKNVEDMVQFINNILDGTVEAQGGDSILQRLKRIVFDAKS -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for FOPNL-TMX3 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for FOPNL-TMX3 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for FOPNL-TMX3 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |