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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:FOXJ3-HNRNPH1 (FusionGDB2 ID:30969)

Fusion Gene Summary for FOXJ3-HNRNPH1

check button Fusion gene summary
Fusion gene informationFusion gene name: FOXJ3-HNRNPH1
Fusion gene ID: 30969
HgeneTgene
Gene symbol

FOXJ3

HNRNPH1

Gene ID

22887

3187

Gene nameforkhead box J3heterogeneous nuclear ribonucleoprotein H1
Synonyms-HNRPH|HNRPH1|hnRNPH
Cytomap

1p34.2

5q35.3

Type of geneprotein-codingprotein-coding
Descriptionforkhead box protein J3heterogeneous nuclear ribonucleoprotein Hepididymis secretory sperm binding proteinheterogeneous nuclear ribonucleoprotein H1 (H)
Modification date2020031320200320
UniProtAcc

Q9UPW0

P31943

Ensembl transtripts involved in fusion geneENST00000372572, ENST00000372573, 
ENST00000361346, ENST00000361776, 
ENST00000545068, ENST00000372571, 
ENST00000393432, ENST00000442819, 
ENST00000356731, ENST00000329433, 
ENST00000510411, ENST00000511300, 
ENST00000524180, 
Fusion gene scores* DoF score22 X 19 X 13=543413 X 10 X 5=650
# samples 3114
** MAII scorelog2(31/5434*10)=-4.13167444494774
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(14/650*10)=-2.21501289097085
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: FOXJ3 [Title/Abstract] AND HNRNPH1 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointFOXJ3(42776720)-HNRNPH1(179048398), # samples:1
Anticipated loss of major functional domain due to fusion event.FOXJ3-HNRNPH1 seems lost the major protein functional domain in Hgene partner, which is a transcription factor due to the frame-shifted ORF.
FOXJ3-HNRNPH1 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF.
FOXJ3-HNRNPH1 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneFOXJ3

GO:0045944

positive regulation of transcription by RNA polymerase II

22740631

TgeneHNRNPH1

GO:0043484

regulation of RNA splicing

16946708


check buttonFusion gene breakpoints across FOXJ3 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonFusion gene breakpoints across HNRNPH1 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4Non-CancerTCGA-IN-AB1X-11AFOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-


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Fusion Gene ORF analysis for FOXJ3-HNRNPH1

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000372572ENST00000393432FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
In-frameENST00000372572ENST00000442819FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
Frame-shiftENST00000372572ENST00000356731FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
In-frameENST00000372572ENST00000329433FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
Frame-shiftENST00000372572ENST00000510411FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
5CDS-intronENST00000372572ENST00000511300FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
5CDS-5UTRENST00000372572ENST00000524180FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
Frame-shiftENST00000372573ENST00000393432FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
Frame-shiftENST00000372573ENST00000442819FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
In-frameENST00000372573ENST00000356731FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
Frame-shiftENST00000372573ENST00000329433FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
In-frameENST00000372573ENST00000510411FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
5CDS-intronENST00000372573ENST00000511300FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
5CDS-5UTRENST00000372573ENST00000524180FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
Frame-shiftENST00000361346ENST00000393432FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
Frame-shiftENST00000361346ENST00000442819FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
In-frameENST00000361346ENST00000356731FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
Frame-shiftENST00000361346ENST00000329433FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
In-frameENST00000361346ENST00000510411FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
5CDS-intronENST00000361346ENST00000511300FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
5CDS-5UTRENST00000361346ENST00000524180FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
Frame-shiftENST00000361776ENST00000393432FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
Frame-shiftENST00000361776ENST00000442819FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
In-frameENST00000361776ENST00000356731FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
Frame-shiftENST00000361776ENST00000329433FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
In-frameENST00000361776ENST00000510411FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
5CDS-intronENST00000361776ENST00000511300FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
5CDS-5UTRENST00000361776ENST00000524180FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
Frame-shiftENST00000545068ENST00000393432FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
Frame-shiftENST00000545068ENST00000442819FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
In-frameENST00000545068ENST00000356731FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
Frame-shiftENST00000545068ENST00000329433FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
In-frameENST00000545068ENST00000510411FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
5CDS-intronENST00000545068ENST00000511300FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
5CDS-5UTRENST00000545068ENST00000524180FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
intron-3CDSENST00000372571ENST00000393432FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
intron-3CDSENST00000372571ENST00000442819FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
intron-3CDSENST00000372571ENST00000356731FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
intron-3CDSENST00000372571ENST00000329433FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
intron-3CDSENST00000372571ENST00000510411FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
intron-intronENST00000372571ENST00000511300FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-
intron-5UTRENST00000372571ENST00000524180FOXJ3chr1

42776720

-HNRNPH1chr5

179048398

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000372572FOXJ3chr142776720-ENST00000393432HNRNPH1chr5179048398-23913564631608381
ENST00000372572FOXJ3chr142776720-ENST00000442819HNRNPH1chr5179048398-23903564631608381
ENST00000372572FOXJ3chr142776720-ENST00000329433HNRNPH1chr5179048398-23383564631677404
ENST00000372573FOXJ3chr142776720-ENST00000356731HNRNPH1chr5179048398-23473134201565381
ENST00000372573FOXJ3chr142776720-ENST00000510411HNRNPH1chr5179048398-22853134201505361
ENST00000361346FOXJ3chr142776720-ENST00000356731HNRNPH1chr5179048398-22692353421487381
ENST00000361346FOXJ3chr142776720-ENST00000510411HNRNPH1chr5179048398-22072353421427361
ENST00000361776FOXJ3chr142776720-ENST00000356731HNRNPH1chr5179048398-22692353421487381
ENST00000361776FOXJ3chr142776720-ENST00000510411HNRNPH1chr5179048398-22072353421427361
ENST00000545068FOXJ3chr142776720-ENST00000356731HNRNPH1chr5179048398-22091752821427381
ENST00000545068FOXJ3chr142776720-ENST00000510411HNRNPH1chr5179048398-21471752821367361

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000372572ENST00000393432FOXJ3chr142776720-HNRNPH1chr5179048398-0.000562960.99943703
ENST00000372572ENST00000442819FOXJ3chr142776720-HNRNPH1chr5179048398-0.0005595060.9994405
ENST00000372572ENST00000329433FOXJ3chr142776720-HNRNPH1chr5179048398-0.0005247970.9994752
ENST00000372573ENST00000356731FOXJ3chr142776720-HNRNPH1chr5179048398-0.0005069720.999493
ENST00000372573ENST00000510411FOXJ3chr142776720-HNRNPH1chr5179048398-0.0004289830.999571
ENST00000361346ENST00000356731FOXJ3chr142776720-HNRNPH1chr5179048398-0.0005809440.9994191
ENST00000361346ENST00000510411FOXJ3chr142776720-HNRNPH1chr5179048398-0.0004643790.9995357
ENST00000361776ENST00000356731FOXJ3chr142776720-HNRNPH1chr5179048398-0.0005809440.9994191
ENST00000361776ENST00000510411FOXJ3chr142776720-HNRNPH1chr5179048398-0.0004643790.9995357
ENST00000545068ENST00000356731FOXJ3chr142776720-HNRNPH1chr5179048398-0.0005310580.999469
ENST00000545068ENST00000510411FOXJ3chr142776720-HNRNPH1chr5179048398-0.0004234150.9995766

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Fusion Genomic Features for FOXJ3-HNRNPH1


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for FOXJ3-HNRNPH1


check button Go to

FGviewer for the breakpoints of chr1:42776720-chr5:179048398

.
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
FOXJ3

Q9UPW0

HNRNPH1

P31943

FUNCTION: Transcriptional activator of MEF2C involved in the regulation of adult muscle fiber type identity and skeletal muscle regeneration (By similarity). Plays an important role in spermatogenesis (By similarity). Required for the survival of spermatogonia and participates in spermatocyte meiosis (By similarity). {ECO:0000250|UniProtKB:Q8BUR3}.FUNCTION: This protein is a component of the heterogeneous nuclear ribonucleoprotein (hnRNP) complexes which provide the substrate for the processing events that pre-mRNAs undergo before becoming functional, translatable mRNAs in the cytoplasm. Mediates pre-mRNA alternative splicing regulation. Inhibits, together with CUGBP1, insulin receptor (IR) pre-mRNA exon 11 inclusion in myoblast. Binds to the IR RNA. Binds poly(RG). {ECO:0000269|PubMed:11003644, ECO:0000269|PubMed:16946708}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneHNRNPH1chr1:42776720chr5:179048398ENST00000356731013111_18832.333333333333336130.66666666666666DomainRRM 2
TgeneHNRNPH1chr1:42776720chr5:179048398ENST00000356731013289_36432.333333333333336130.66666666666666DomainRRM 3
TgeneHNRNPH1chr1:42776720chr5:179048398ENST00000393432114111_18832.333333333333336646.0DomainRRM 2
TgeneHNRNPH1chr1:42776720chr5:179048398ENST00000393432114289_36432.333333333333336646.0DomainRRM 3
TgeneHNRNPH1chr1:42776720chr5:179048398ENST00000442819114111_18832.333333333333336655.6666666666666DomainRRM 2
TgeneHNRNPH1chr1:42776720chr5:179048398ENST00000442819114289_36432.333333333333336655.6666666666666DomainRRM 3
TgeneHNRNPH1chr1:42776720chr5:179048398ENST00000356731013234_43332.333333333333336130.66666666666666RegionNote=2 X 16 AA Gly-rich approximate repeats
TgeneHNRNPH1chr1:42776720chr5:179048398ENST00000356731013354_39232.333333333333336130.66666666666666RegionNote=2 X 19 AA perfect repeats
TgeneHNRNPH1chr1:42776720chr5:179048398ENST00000393432114234_43332.333333333333336646.0RegionNote=2 X 16 AA Gly-rich approximate repeats
TgeneHNRNPH1chr1:42776720chr5:179048398ENST00000393432114354_39232.333333333333336646.0RegionNote=2 X 19 AA perfect repeats
TgeneHNRNPH1chr1:42776720chr5:179048398ENST00000442819114234_43332.333333333333336655.6666666666666RegionNote=2 X 16 AA Gly-rich approximate repeats
TgeneHNRNPH1chr1:42776720chr5:179048398ENST00000442819114354_39232.333333333333336655.6666666666666RegionNote=2 X 19 AA perfect repeats
TgeneHNRNPH1chr1:42776720chr5:179048398ENST00000356731013234_24932.333333333333336130.66666666666666RepeatNote=1-1
TgeneHNRNPH1chr1:42776720chr5:179048398ENST00000356731013354_37232.333333333333336130.66666666666666RepeatNote=2-1
TgeneHNRNPH1chr1:42776720chr5:179048398ENST00000356731013374_39232.333333333333336130.66666666666666RepeatNote=2-2
TgeneHNRNPH1chr1:42776720chr5:179048398ENST00000356731013418_43332.333333333333336130.66666666666666RepeatNote=1-2
TgeneHNRNPH1chr1:42776720chr5:179048398ENST00000393432114234_24932.333333333333336646.0RepeatNote=1-1
TgeneHNRNPH1chr1:42776720chr5:179048398ENST00000393432114354_37232.333333333333336646.0RepeatNote=2-1
TgeneHNRNPH1chr1:42776720chr5:179048398ENST00000393432114374_39232.333333333333336646.0RepeatNote=2-2
TgeneHNRNPH1chr1:42776720chr5:179048398ENST00000393432114418_43332.333333333333336646.0RepeatNote=1-2
TgeneHNRNPH1chr1:42776720chr5:179048398ENST00000442819114234_24932.333333333333336655.6666666666666RepeatNote=1-1
TgeneHNRNPH1chr1:42776720chr5:179048398ENST00000442819114354_37232.333333333333336655.6666666666666RepeatNote=2-1
TgeneHNRNPH1chr1:42776720chr5:179048398ENST00000442819114374_39232.333333333333336655.6666666666666RepeatNote=2-2
TgeneHNRNPH1chr1:42776720chr5:179048398ENST00000442819114418_43332.333333333333336655.6666666666666RepeatNote=1-2

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneFOXJ3chr1:42776720chr5:179048398ENST00000361346-21377_16814.666666666666666623.0DNA bindingFork-head
HgeneFOXJ3chr1:42776720chr5:179048398ENST00000361776-21277_16814.666666666666666589.0DNA bindingFork-head
HgeneFOXJ3chr1:42776720chr5:179048398ENST00000372572-41577_16814.666666666666666623.0DNA bindingFork-head
HgeneFOXJ3chr1:42776720chr5:179048398ENST00000372573-21377_16814.666666666666666623.0DNA bindingFork-head
HgeneFOXJ3chr1:42776720chr5:179048398ENST00000545068-21377_16814.666666666666666623.0DNA bindingFork-head
TgeneHNRNPH1chr1:42776720chr5:179048398ENST0000035673101311_9032.333333333333336130.66666666666666DomainRRM 1
TgeneHNRNPH1chr1:42776720chr5:179048398ENST0000039343211411_9032.333333333333336646.0DomainRRM 1
TgeneHNRNPH1chr1:42776720chr5:179048398ENST0000044281911411_9032.333333333333336655.6666666666666DomainRRM 1


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Fusion Gene Sequence for FOXJ3-HNRNPH1


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>In-frame_ENST00000372572_ENST00000393432_TCGA-IN-AB1X-11A_FOXJ3_chr1_42776720_-_HNRNPH1_chr5_179048398_length(transcript)=2391nt_BP=356nt
GCGAGACGCCCTCTCTCTTCCAGCCGCAGCCGCGTTGCGGGTTCTTCCCTGTGGAACAGTAGAGACCTAGTCTGCCTTCTTTCACAAGAT
AATCCTTCAATTATTTGAAGGTGATTATTCAGCATATATCTCTTGAGTACCTGTGCATGCAAGACACTGTCCTGGATATTGTGAGAGATC
CAAAGTTTAGTATGAGATCATTTTCCCTTGCCTGAGTTTTGAGCTGATTGAGAAATAAGAACCTACAGATGAAGAAGCAAGACAGTACCT
TTAAAAAAATTAGCTTTTTATTCAGATTCTCTTTGTGGCCAGATGGGTTTGTATGGACAGGCTTGTCCATCTGTAACTTCATTAAGACTG
CAAAATTCAAAATGGGGCTCAAGGTATTCGTTTCATCTACACCAGAGAAGGCAGACCAAGTGGCGAGGCTTTTGTTGAACTTGAATCAGA
AGATGAAGTCAAATTGGCCCTGAAAAAAGACAGAGAAACTATGGGACACAGATATGTTGAAGTATTCAAGTCAAACAACGTTGAAATGGA
TTGGGTGTTGAAGCATACTGGTCCAAATAGTCCTGACACGGCCAATGATGGCTTTGTACGGCTTAGAGGACTTCCCTTTGGATGTAGCAA
GGAAGAAATTGTTCAGTTCTTCTCAGGGTTGGAAATCGTGCCAAATGGGATAACATTGCCGGTGGACTTCCAGGGGAGGAGTACGGGGGA
GGCCTTCGTGCAGTTTGCTTCACAGGAAATAGCTGAAAAGGCTCTAAAGAAACACAAGGAAAGAATAGGGCACAGGTATATTGAAATCTT
TAAGAGCAGTAGAGCTGAAGTTAGAACTCATTATGATCCACCACGAAAGCTTATGGCCATGCAGCGGCCAGGTCCTTATGACAGACCTGG
GGCTGGTAGAGGGTATAACAGCATTGGCAGAGGAGCTGGCTTTGAGAGGATGAGGCGTGGTGCTTATGGTGGAGGCTATGGAGGCTATGA
TGATTACAATGGCTATAATGATGGCTATGGATTTGGGTCAGATAGATTTGGAAGAGACCTCAATTACTGTTTTTCAGGAATGTCTGATCA
CAGATACGGGGATGGTGGCTCTACTTTCCAGAGCACAACAGGACACTGTGTACACATGCGGGGATTACCTTACAGAGCTACTGAGAATGA
CATTTATAATTTTTTTTCACCGCTCAACCCTGTGAGAGTACACATTGAAATTGGTCCTGATGGCAGAGTAACTGGTGAAGCAGATGTCGA
GTTCGCAACTCATGAAGATGCTGTGGCAGCTATGTCAAAAGACAAAGCAAATATGCAACACAGATATGTAGAACTCTTCTTGAATTCTAC
AGCAGGAGCAAGCGGTGGTGCTTACGAACACAGATATGTAGAACTCTTCTTGAATTCTACAGCAGGAGCAAGCGGTGGTGCTTATGGTAG
CCAAATGATGGGAGGCATGGGCTTGTCAAACCAGTCCAGCTACGGGGGCCCAGCCAGCCAGCAGCTGAGTGGGGGTTACGGAGGCGGCTA
CGGTGGCCAGAGCAGCATGAGTGGATACGACCAAGTTTTACAGGAAAACTCCAGTGATTTTCAATCAAACATTGCATAGGTAACCAAGGA
GCAGTGAACAGCAGCTACTACAGTAGTGGAAGCCGTGCATCTATGGGCGTGAACGGAATGGGAGGGTTGTCTAGCATGTCCAGTATGAGT
GGTGGATGGGGAATGTAATTGATCGATCCTGATCACTGACTCTTGGTCAACCTTTTTTTTTTTTTTTTTTTTTTCTTTAAGAAAACTTCA
GTTTAACAGTTTCTGCAATACAAGCTTGTGATTTATGCTTACTCTAAGTGGAAATCAGGATTGTTATGAAGACTTAAGGCCCAGTATTTT
TGAATACAATACTCATCTAGGATGTAACAGTGAAGCTGAGTAAACTATAACTGTTAAACTTAAGTTCCAGCTTTTCTCAAGTTAGTTATA
GGATGTACTTAAGCAGTAAGCGTATTTAGGTAAAAGCAGTTGAATTATGTTAAATGTTGCCCTTTGCCACGTTAAATTGAACACTGTTTT
GGATGCATGTTGAAAGACATGCTTTTATTTTTTTGTAAAACAATATAGGAGCTGTGTCTACTATTAAAAGTGAAACATTTTGGCATGTTT
GTTAATTCTAGTTTCATTTAATAACCTGTAAGGCACGTAAGTTTAAGCTTTTTTTTTTTTTAAGTTAATGGGAAAAATTTGAGACGCAAT
ACCAATACTTAGGATTTTGGTCTTGGTGTTTGTATGAAATTCTGAGGCCTTGATTTAAATCTTTCATTGTATTGTGATTTCCTTTTAGGT

>In-frame_ENST00000372572_ENST00000393432_TCGA-IN-AB1X-11A_FOXJ3_chr1_42776720_-_HNRNPH1_chr5_179048398_length(amino acids)=381AA_start in transcript=463_stop in transcript=1608
MALKKDRETMGHRYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQ
FASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPGAGRGYNSIGRGAGFERMRRGAYGGGYGGYDDYNG
YNDGYGFGSDRFGRDLNYCFSGMSDHRYGDGGSTFQSTTGHCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATH
EDAVAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQMMGGMGLSNQSSYGGPASQQLSGGYGGGYGGQS

--------------------------------------------------------------
>In-frame_ENST00000372572_ENST00000442819_TCGA-IN-AB1X-11A_FOXJ3_chr1_42776720_-_HNRNPH1_chr5_179048398_length(transcript)=2390nt_BP=356nt
GCGAGACGCCCTCTCTCTTCCAGCCGCAGCCGCGTTGCGGGTTCTTCCCTGTGGAACAGTAGAGACCTAGTCTGCCTTCTTTCACAAGAT
AATCCTTCAATTATTTGAAGGTGATTATTCAGCATATATCTCTTGAGTACCTGTGCATGCAAGACACTGTCCTGGATATTGTGAGAGATC
CAAAGTTTAGTATGAGATCATTTTCCCTTGCCTGAGTTTTGAGCTGATTGAGAAATAAGAACCTACAGATGAAGAAGCAAGACAGTACCT
TTAAAAAAATTAGCTTTTTATTCAGATTCTCTTTGTGGCCAGATGGGTTTGTATGGACAGGCTTGTCCATCTGTAACTTCATTAAGACTG
CAAAATTCAAAATGGGGCTCAAGGTATTCGTTTCATCTACACCAGAGAAGGCAGACCAAGTGGCGAGGCTTTTGTTGAACTTGAATCAGA
AGATGAAGTCAAATTGGCCCTGAAAAAAGACAGAGAAACTATGGGACACAGATATGTTGAAGTATTCAAGTCAAACAACGTTGAAATGGA
TTGGGTGTTGAAGCATACTGGTCCAAATAGTCCTGACACGGCCAATGATGGCTTTGTACGGCTTAGAGGACTTCCCTTTGGATGTAGCAA
GGAAGAAATTGTTCAGTTCTTCTCAGGGTTGGAAATCGTGCCAAATGGGATAACATTGCCGGTGGACTTCCAGGGGAGGAGTACGGGGGA
GGCCTTCGTGCAGTTTGCTTCACAGGAAATAGCTGAAAAGGCTCTAAAGAAACACAAGGAAAGAATAGGGCACAGGTATATTGAAATCTT
TAAGAGCAGTAGAGCTGAAGTTAGAACTCATTATGATCCACCACGAAAGCTTATGGCCATGCAGCGGCCAGGTCCTTATGACAGACCTGG
GGCTGGTAGAGGGTATAACAGCATTGGCAGAGGAGCTGGCTTTGAGAGGATGAGGCGTGGTGCTTATGGTGGAGGCTATGGAGGCTATGA
TGATTACAATGGCTATAATGATGGCTATGGATTTGGGTCAGATAGATTTGGAAGAGACCTCAATTACTGTTTTTCAGGAATGTCTGATCA
CAGATACGGGGATGGTGGCTCTACTTTCCAGAGCACAACAGGACACTGTGTACACATGCGGGGATTACCTTACAGAGCTACTGAGAATGA
CATTTATAATTTTTTTTCACCGCTCAACCCTGTGAGAGTACACATTGAAATTGGTCCTGATGGCAGAGTAACTGGTGAAGCAGATGTCGA
GTTCGCAACTCATGAAGATGCTGTGGCAGCTATGTCAAAAGACAAAGCAAATATGCAACACAGATATGTAGAACTCTTCTTGAATTCTAC
AGCAGGAGCAAGCGGTGGTGCTTACGAACACAGATATGTAGAACTCTTCTTGAATTCTACAGCAGGAGCAAGCGGTGGTGCTTATGGTAG
CCAAATGATGGGAGGCATGGGCTTGTCAAACCAGTCCAGCTACGGGGGCCCAGCCAGCCAGCAGCTGAGTGGGGGTTACGGAGGCGGCTA
CGGTGGCCAGAGCAGCATGAGTGGATACGACCAAGTTTTACAGGAAAACTCCAGTGATTTTCAATCAAACATTGCATAGGTAACCAAGGA
GCAGTGAACAGCAGCTACTACAGTAGTGGAAGCCGTGCATCTATGGGCGTGAACGGAATGGGAGGGTTGTCTAGCATGTCCAGTATGAGT
GGTGGATGGGGAATGTAATTGATCGATCCTGATCACTGACTCTTGGTCAACCTTTTTTTTTTTTTTTTTTTTTTCTTTAAGAAAACTTCA
GTTTAACAGTTTCTGCAATACAAGCTTGTGATTTATGCTTACTCTAAGTGGAAATCAGGATTGTTATGAAGACTTAAGGCCCAGTATTTT
TGAATACAATACTCATCTAGGATGTAACAGTGAAGCTGAGTAAACTATAACTGTTAAACTTAAGTTCCAGCTTTTCTCAAGTTAGTTATA
GGATGTACTTAAGCAGTAAGCGTATTTAGGTAAAAGCAGTTGAATTATGTTAAATGTTGCCCTTTGCCACGTTAAATTGAACACTGTTTT
GGATGCATGTTGAAAGACATGCTTTTATTTTTTTGTAAAACAATATAGGAGCTGTGTCTACTATTAAAAGTGAAACATTTTGGCATGTTT
GTTAATTCTAGTTTCATTTAATAACCTGTAAGGCACGTAAGTTTAAGCTTTTTTTTTTTTTAAGTTAATGGGAAAAATTTGAGACGCAAT
ACCAATACTTAGGATTTTGGTCTTGGTGTTTGTATGAAATTCTGAGGCCTTGATTTAAATCTTTCATTGTATTGTGATTTCCTTTTAGGT

>In-frame_ENST00000372572_ENST00000442819_TCGA-IN-AB1X-11A_FOXJ3_chr1_42776720_-_HNRNPH1_chr5_179048398_length(amino acids)=381AA_start in transcript=463_stop in transcript=1608
MALKKDRETMGHRYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQ
FASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPGAGRGYNSIGRGAGFERMRRGAYGGGYGGYDDYNG
YNDGYGFGSDRFGRDLNYCFSGMSDHRYGDGGSTFQSTTGHCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATH
EDAVAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQMMGGMGLSNQSSYGGPASQQLSGGYGGGYGGQS

--------------------------------------------------------------
>In-frame_ENST00000372572_ENST00000329433_TCGA-IN-AB1X-11A_FOXJ3_chr1_42776720_-_HNRNPH1_chr5_179048398_length(transcript)=2338nt_BP=356nt
GCGAGACGCCCTCTCTCTTCCAGCCGCAGCCGCGTTGCGGGTTCTTCCCTGTGGAACAGTAGAGACCTAGTCTGCCTTCTTTCACAAGAT
AATCCTTCAATTATTTGAAGGTGATTATTCAGCATATATCTCTTGAGTACCTGTGCATGCAAGACACTGTCCTGGATATTGTGAGAGATC
CAAAGTTTAGTATGAGATCATTTTCCCTTGCCTGAGTTTTGAGCTGATTGAGAAATAAGAACCTACAGATGAAGAAGCAAGACAGTACCT
TTAAAAAAATTAGCTTTTTATTCAGATTCTCTTTGTGGCCAGATGGGTTTGTATGGACAGGCTTGTCCATCTGTAACTTCATTAAGACTG
CAAAATTCAAAATGGGGCTCAAGGTATTCGTTTCATCTACACCAGAGAAGGCAGACCAAGTGGCGAGGCTTTTGTTGAACTTGAATCAGA
AGATGAAGTCAAATTGGCCCTGAAAAAAGACAGAGAAACTATGGGACACAGATATGTTGAAGTATTCAAGTCAAACAACGTTGAAATGGA
TTGGGTGTTGAAGCATACTGGTCCAAATAGTCCTGACACGGCCAATGATGGCTTTGTACGGCTTAGAGGACTTCCCTTTGGATGTAGCAA
GGAAGAAATTGTTCAGTTCTTCTCAGGGTTGGAAATCGTGCCAAATGGGATAACATTGCCGGTGGACTTCCAGGGGAGGAGTACGGGGGA
GGCCTTCGTGCAGTTTGCTTCACAGGAAATAGCTGAAAAGGCTCTAAAGAAACACAAGGAAAGAATAGGGCACAGGTATATTGAAATCTT
TAAGAGCAGTAGAGCTGAAGTTAGAACTCATTATGATCCACCACGAAAGCTTATGGCCATGCAGCGGCCAGGTCCTTATGACAGACCTGG
GGCTGGTAGAGGGTATAACAGCATTGGCAGAGGAGCTGGCTTTGAGAGGATGAGGCGTGGTGCTTATGGTGGAGGCTATGGAGGCTATGA
TGATTACAATGGCTATAATGATGGCTATGGATTTGGGTCAGATAGATTTGGAAGAGACCTCAATTACTGTTTTTCAGGAATGTCTGATCA
CAGATACGGGGATGGTGGCTCTACTTTCCAGAGCACAACAGGACACTGTGTACACATGCGGGGATTACCTTACAGAGCTACTGAGAATGA
CATTTATAATTTTTTTTCACCGCTCAACCCTGTGAGAGTACACATTGAAATTGGTCCTGATGGCAGAGTAACTGGTGAAGCAGATGTCGA
GTTCGCAACTCATGAAGATGCTGTGGCAGCTATGTCAAAAGACAAAGCAAATATGCAACACAGATATGTAGAACTCTTCTTGAATTCTAC
AGCAGGAGCAAGCGGTGGTGCTTACGAACACAGATATGTAGAACTCTTCTTGAATTCTACAGCAGGAGCAAGCGGTGGTGCTTATGGTAG
CCAAATGATGGGAGGCATGGGCTTGTCAAACCAGTCCAGCTACGGGGGCCCAGCCAGCCAGCAGCTGAGTGGGGGTTACGGAGGCGGCTA
CGGTGGCCAGAGCAGCATGAGTGGATACGGTAACCAAGGAGCAGTGAACAGCAGCTACTACAGTAGTGGAAGCCGTGCATCTATGGGCGT
GAACGGAATGGGAGGGTTGTCTAGCATGTCCAGTATGAGTGGTGGATGGGGAATGTAATTGATCGATCCTGATCACTGACTCTTGGTCAA
CCTTTTTTTTTTTTTTTTTTTTTTCTTTAAGAAAACTTCAGTTTAACAGTTTCTGCAATACAAGCTTGTGATTTATGCTTACTCTAAGTG
GAAATCAGGATTGTTATGAAGACTTAAGGCCCAGTATTTTTGAATACAATACTCATCTAGGATGTAACAGTGAAGCTGAGTAAACTATAA
CTGTTAAACTTAAGTTCCAGCTTTTCTCAAGTTAGTTATAGGATGTACTTAAGCAGTAAGCGTATTTAGGTAAAAGCAGTTGAATTATGT
TAAATGTTGCCCTTTGCCACGTTAAATTGAACACTGTTTTGGATGCATGTTGAAAGACATGCTTTTATTTTTTTGTAAAACAATATAGGA
GCTGTGTCTACTATTAAAAGTGAAACATTTTGGCATGTTTGTTAATTCTAGTTTCATTTAATAACCTGTAAGGCACGTAAGTTTAAGCTT
TTTTTTTTTTTAAGTTAATGGGAAAAATTTGAGACGCAATACCAATACTTAGGATTTTGGTCTTGGTGTTTGTATGAAATTCTGAGGCCT

>In-frame_ENST00000372572_ENST00000329433_TCGA-IN-AB1X-11A_FOXJ3_chr1_42776720_-_HNRNPH1_chr5_179048398_length(amino acids)=404AA_start in transcript=463_stop in transcript=1677
MALKKDRETMGHRYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQ
FASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPGAGRGYNSIGRGAGFERMRRGAYGGGYGGYDDYNG
YNDGYGFGSDRFGRDLNYCFSGMSDHRYGDGGSTFQSTTGHCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATH
EDAVAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQMMGGMGLSNQSSYGGPASQQLSGGYGGGYGGQS

--------------------------------------------------------------
>In-frame_ENST00000372573_ENST00000356731_TCGA-IN-AB1X-11A_FOXJ3_chr1_42776720_-_HNRNPH1_chr5_179048398_length(transcript)=2347nt_BP=313nt
ATAACCTGGGTAGCTACCTTGAGAATTAGAAGGGCCTTTAGAGGTCCAACTCCTTTAAGAAAGAAAGAAAGACCAGGCACGGGAAAGGCC
TCCGCAGACATGAGTCTAGCACCTGGGACTCATGAAGTTCTGAAAAGAGGGGTGTCCTGAAGGTCCAAGGCGCCTTTGTTGGGGGTCCCG
GAATCCGCGGTGTGCCAGGTCGGAAAAGGCGTCCGCTTTCCTGGAGAGGAGGCTAAGGTGCCGGGCGCTTCGATTCTCTTTGTGGCCAGA
TGGGTTTGTATGGACAGGCTTGTCCATCTGTAACTTCATTAAGACTGCAAAATTCAAAATGGGGCTCAAGGTATTCGTTTCATCTACACC
AGAGAAGGCAGACCAAGTGGCGAGGCTTTTGTTGAACTTGAATCAGAAGATGAAGTCAAATTGGCCCTGAAAAAAGACAGAGAAACTATG
GGACACAGATATGTTGAAGTATTCAAGTCAAACAACGTTGAAATGGATTGGGTGTTGAAGCATACTGGTCCAAATAGTCCTGACACGGCC
AATGATGGCTTTGTACGGCTTAGAGGACTTCCCTTTGGATGTAGCAAGGAAGAAATTGTTCAGTTCTTCTCAGGGTTGGAAATCGTGCCA
AATGGGATAACATTGCCGGTGGACTTCCAGGGGAGGAGTACGGGGGAGGCCTTCGTGCAGTTTGCTTCACAGGAAATAGCTGAAAAGGCT
CTAAAGAAACACAAGGAAAGAATAGGGCACAGGTATATTGAAATCTTTAAGAGCAGTAGAGCTGAAGTTAGAACTCATTATGATCCACCA
CGAAAGCTTATGGCCATGCAGCGGCCAGGTCCTTATGACAGACCTGGGGCTGGTAGAGGGTATAACAGCATTGGCAGAGGAGCTGGCTTT
GAGAGGATGAGGCGTGGTGCTTATGGTGGAGGCTATGGAGGCTATGATGATTACAATGGCTATAATGATGGCTATGGATTTGGGTCAGAT
AGATTTGGAAGAGACCTCAATTACTGTTTTTCAGGAATGTCTGATCACAGATACGGGGATGGTGGCTCTACTTTCCAGAGCACAACAGGA
CACTGTGTACACATGCGGGGATTACCTTACAGAGCTACTGAGAATGACATTTATAATTTTTTTTCACCGCTCAACCCTGTGAGAGTACAC
ATTGAAATTGGTCCTGATGGCAGAGTAACTGGTGAAGCAGATGTCGAGTTCGCAACTCATGAAGATGCTGTGGCAGCTATGTCAAAAGAC
AAAGCAAATATGCAACACAGATATGTAGAACTCTTCTTGAATTCTACAGCAGGAGCAAGCGGTGGTGCTTACGAACACAGATATGTAGAA
CTCTTCTTGAATTCTACAGCAGGAGCAAGCGGTGGTGCTTATGGTAGCCAAATGATGGGAGGCATGGGCTTGTCAAACCAGTCCAGCTAC
GGGGGCCCAGCCAGCCAGCAGCTGAGTGGGGGTTACGGAGGCGGCTACGGTGGCCAGAGCAGCATGAGTGGATACGACCAAGTTTTACAG
GAAAACTCCAGTGATTTTCAATCAAACATTGCATAGGTAACCAAGGAGCAGTGAACAGCAGCTACTACAGTAGTGGAAGCCGTGCATCTA
TGGGCGTGAACGGAATGGGAGGGTTGTCTAGCATGTCCAGTATGAGTGGTGGATGGGGAATGTAATTGATCGATCCTGATCACTGACTCT
TGGTCAACCTTTTTTTTTTTTTTTTTTTTTTCTTTAAGAAAACTTCAGTTTAACAGTTTCTGCAATACAAGCTTGTGATTTATGCTTACT
CTAAGTGGAAATCAGGATTGTTATGAAGACTTAAGGCCCAGTATTTTTGAATACAATACTCATCTAGGATGTAACAGTGAAGCTGAGTAA
ACTATAACTGTTAAACTTAAGTTCCAGCTTTTCTCAAGTTAGTTATAGGATGTACTTAAGCAGTAAGCGTATTTAGGTAAAAGCAGTTGA
ATTATGTTAAATGTTGCCCTTTGCCACGTTAAATTGAACACTGTTTTGGATGCATGTTGAAAGACATGCTTTTATTTTTTTGTAAAACAA
TATAGGAGCTGTGTCTACTATTAAAAGTGAAACATTTTGGCATGTTTGTTAATTCTAGTTTCATTTAATAACCTGTAAGGCACGTAAGTT
TAAGCTTTTTTTTTTTTTAAGTTAATGGGAAAAATTTGAGACGCAATACCAATACTTAGGATTTTGGTCTTGGTGTTTGTATGAAATTCT
GAGGCCTTGATTTAAATCTTTCATTGTATTGTGATTTCCTTTTAGGTATATTGCGCTAAGTGAAACTTGTCAAATAAATCCTCCTTTTAA

>In-frame_ENST00000372573_ENST00000356731_TCGA-IN-AB1X-11A_FOXJ3_chr1_42776720_-_HNRNPH1_chr5_179048398_length(amino acids)=381AA_start in transcript=420_stop in transcript=1565
MALKKDRETMGHRYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQ
FASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPGAGRGYNSIGRGAGFERMRRGAYGGGYGGYDDYNG
YNDGYGFGSDRFGRDLNYCFSGMSDHRYGDGGSTFQSTTGHCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATH
EDAVAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQMMGGMGLSNQSSYGGPASQQLSGGYGGGYGGQS

--------------------------------------------------------------
>In-frame_ENST00000372573_ENST00000510411_TCGA-IN-AB1X-11A_FOXJ3_chr1_42776720_-_HNRNPH1_chr5_179048398_length(transcript)=2285nt_BP=313nt
ATAACCTGGGTAGCTACCTTGAGAATTAGAAGGGCCTTTAGAGGTCCAACTCCTTTAAGAAAGAAAGAAAGACCAGGCACGGGAAAGGCC
TCCGCAGACATGAGTCTAGCACCTGGGACTCATGAAGTTCTGAAAAGAGGGGTGTCCTGAAGGTCCAAGGCGCCTTTGTTGGGGGTCCCG
GAATCCGCGGTGTGCCAGGTCGGAAAAGGCGTCCGCTTTCCTGGAGAGGAGGCTAAGGTGCCGGGCGCTTCGATTCTCTTTGTGGCCAGA
TGGGTTTGTATGGACAGGCTTGTCCATCTGTAACTTCATTAAGACTGCAAAATTCAAAATGGGGCTCAAGGTATTCGTTTCATCTACACC
AGAGAAGGCAGACCAAGTGGCGAGGCTTTTGTTGAACTTGAATCAGAAGATGAAGTCAAATTGGCCCTGAAAAAAGACAGAGAAACTATG
GGACACAGATATGTTGAAGTATTCAAGTCAAACAACGTTGAAATGGATTGGGTGTTGAAGCATACTGGTCCAAATAGTCCTGACACGGCC
AATGATGGCTTTGTACGGCTTAGAGGACTTCCCTTTGGATGTAGCAAGGAAGAAATTGTTCAGTTCTTCTCAGGGTTGGAAATCGTGCCA
AATGGGATAACATTGCCGGTGGACTTCCAGGGGAGGAGTACGGGGGAGGCCTTCGTGCAGTTTGCTTCACAGGAAATAGCTGAAAAGGCT
CTAAAGAAACACAAGGAAAGAATAGGGCACAGGTATATTGAAATCTTTAAGAGCAGTAGAGCTGAAGTTAGAACTCATTATGATCCACCA
CGAAAGCTTATGGCCATGCAGCGGCCAGGTCCTTATGACAGACCTGGGGCTGGTAGAGGGTATAACAGCATTGGCAGAGGAGCTGGCTTT
GAGAGGATGAGGCGTGGTGCTTATGGTGGAGGCTATGGAGGCTATGATGATTACAATGGCTATAATGATGGCTATGGATTTGGGTCAGAT
AGATTTGGAAGAGACCTCAATTACTGTTTTTCAGGAATGTCTGATCACAGATACGGGGATGGTGGCTCTACTTTCCAGAGCACAACAGGA
CACTGTGTACACATGCGGGGATTACCTTACAGAGCTACTGAGAATGACATTTATAATTTTTTTTCACCGCTCAACCCTGTGAGAGTACAC
ATTGAAATTGGTCCTGATGGCAGAGTAACTGGTGAAGCAGATGTCGAGTTCGCAACTCATGAAGATGCTGTGGCAGCTATGTCAAAAGAC
AAAGCAAATATGCAACACAGATATGTAGAACTCTTCTTGAATTCTACAGCAGGAGCAAGCGGTGGTGCTTACGGTAGCCAAATGCTAGGA
GGCATGGGTTTGTCAAACCAGTCCAGCTACGGGGGCCCAGCCAGCCAGCAGCTGAGTGGGGGTTACGGAGGCGGCTACGGTGGCCAGAGC
AGCATGAGTGGATACGACCAAGTTTTACAGGAAAACTCCAGTGATTTTCAATCAAACATTGCATAGGTAACCAAGGAGCAGTGAACAGCA
GCTACTACAGTAGTGGAAGCCGTGCATCTATGGGCGTGAACGGAATGGGAGGGTTGTCTAGCATGTCCAGTATGAGTGGTGGATGGGGAA
TGTAATTGATCGATCCTGATCACTGACTCTTGGTCAACCTTTTTTTTTTTTTTTTTTTTTTCTTTAAGAAAACTTCAGTTTAACAGTTTC
TGCAATACAAGCTTGTGATTTATGCTTACTCTAAGTGGAAATCAGGATTGTTATGAAGACTTAAGGCCCAGTATTTTTGAATACAATACT
CATCTAGGATGTAACAGTGAAGCTGAGTAAACTATAACTGTTAAACTTAAGTTCCAGCTTTTCTCAAGTTAGTTATAGGATGTACTTAAG
CAGTAAGCGTATTTAGGTAAAAGCAGTTGAATTATGTTAAATGTTGCCCTTTGCCACGTTAAATTGAACACTGTTTTGGATGCATGTTGA
AAGACATGCTTTTATTTTTTTGTAAAACAATATAGGAGCTGTGTCTACTATTAAAAGTGAAACATTTTGGCATGTTTGTTAATTCTAGTT
TCATTTAATAACCTGTAAGGCACGTAAGTTTAAGCTTTTTTTTTTTTTAAGTTAATGGGAAAAATTTGAGACGCAATACCAATACTTAGG
ATTTTGGTCTTGGTGTTTGTATGAAATTCTGAGGCCTTGATTTAAATCTTTCATTGTATTGTGATTTCCTTTTAGGTATATTGCGCTAAG

>In-frame_ENST00000372573_ENST00000510411_TCGA-IN-AB1X-11A_FOXJ3_chr1_42776720_-_HNRNPH1_chr5_179048398_length(amino acids)=361AA_start in transcript=420_stop in transcript=1505
MALKKDRETMGHRYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQ
FASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPGAGRGYNSIGRGAGFERMRRGAYGGGYGGYDDYNG
YNDGYGFGSDRFGRDLNYCFSGMSDHRYGDGGSTFQSTTGHCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATH
EDAVAAMSKDKANMQHRYVELFLNSTAGASGGAYGSQMLGGMGLSNQSSYGGPASQQLSGGYGGGYGGQSSMSGYDQVLQENSSDFQSNI

--------------------------------------------------------------
>In-frame_ENST00000361346_ENST00000356731_TCGA-IN-AB1X-11A_FOXJ3_chr1_42776720_-_HNRNPH1_chr5_179048398_length(transcript)=2269nt_BP=235nt
AGTTCCGGGTGCGCGGCCCCGGATGTTGGCTGCTCTTGCTGCCGCCGCCGCTCTCGGGGCTGCTCGGGGCCTCGACCGCTCGCAGTAGGC
ACCGTTGGGACCTTTCCCGGGGGGGCGGAGACGCACGGAGCGGCCGGGGGCTCGGCCGGGCCGTCCCGGCCTGCGCAGCCTGAGATTCTC
TTTGTGGCCAGATGGGTTTGTATGGACAGGCTTGTCCATCTGTAACTTCATTAAGACTGCAAAATTCAAAATGGGGCTCAAGGTATTCGT
TTCATCTACACCAGAGAAGGCAGACCAAGTGGCGAGGCTTTTGTTGAACTTGAATCAGAAGATGAAGTCAAATTGGCCCTGAAAAAAGAC
AGAGAAACTATGGGACACAGATATGTTGAAGTATTCAAGTCAAACAACGTTGAAATGGATTGGGTGTTGAAGCATACTGGTCCAAATAGT
CCTGACACGGCCAATGATGGCTTTGTACGGCTTAGAGGACTTCCCTTTGGATGTAGCAAGGAAGAAATTGTTCAGTTCTTCTCAGGGTTG
GAAATCGTGCCAAATGGGATAACATTGCCGGTGGACTTCCAGGGGAGGAGTACGGGGGAGGCCTTCGTGCAGTTTGCTTCACAGGAAATA
GCTGAAAAGGCTCTAAAGAAACACAAGGAAAGAATAGGGCACAGGTATATTGAAATCTTTAAGAGCAGTAGAGCTGAAGTTAGAACTCAT
TATGATCCACCACGAAAGCTTATGGCCATGCAGCGGCCAGGTCCTTATGACAGACCTGGGGCTGGTAGAGGGTATAACAGCATTGGCAGA
GGAGCTGGCTTTGAGAGGATGAGGCGTGGTGCTTATGGTGGAGGCTATGGAGGCTATGATGATTACAATGGCTATAATGATGGCTATGGA
TTTGGGTCAGATAGATTTGGAAGAGACCTCAATTACTGTTTTTCAGGAATGTCTGATCACAGATACGGGGATGGTGGCTCTACTTTCCAG
AGCACAACAGGACACTGTGTACACATGCGGGGATTACCTTACAGAGCTACTGAGAATGACATTTATAATTTTTTTTCACCGCTCAACCCT
GTGAGAGTACACATTGAAATTGGTCCTGATGGCAGAGTAACTGGTGAAGCAGATGTCGAGTTCGCAACTCATGAAGATGCTGTGGCAGCT
ATGTCAAAAGACAAAGCAAATATGCAACACAGATATGTAGAACTCTTCTTGAATTCTACAGCAGGAGCAAGCGGTGGTGCTTACGAACAC
AGATATGTAGAACTCTTCTTGAATTCTACAGCAGGAGCAAGCGGTGGTGCTTATGGTAGCCAAATGATGGGAGGCATGGGCTTGTCAAAC
CAGTCCAGCTACGGGGGCCCAGCCAGCCAGCAGCTGAGTGGGGGTTACGGAGGCGGCTACGGTGGCCAGAGCAGCATGAGTGGATACGAC
CAAGTTTTACAGGAAAACTCCAGTGATTTTCAATCAAACATTGCATAGGTAACCAAGGAGCAGTGAACAGCAGCTACTACAGTAGTGGAA
GCCGTGCATCTATGGGCGTGAACGGAATGGGAGGGTTGTCTAGCATGTCCAGTATGAGTGGTGGATGGGGAATGTAATTGATCGATCCTG
ATCACTGACTCTTGGTCAACCTTTTTTTTTTTTTTTTTTTTTTCTTTAAGAAAACTTCAGTTTAACAGTTTCTGCAATACAAGCTTGTGA
TTTATGCTTACTCTAAGTGGAAATCAGGATTGTTATGAAGACTTAAGGCCCAGTATTTTTGAATACAATACTCATCTAGGATGTAACAGT
GAAGCTGAGTAAACTATAACTGTTAAACTTAAGTTCCAGCTTTTCTCAAGTTAGTTATAGGATGTACTTAAGCAGTAAGCGTATTTAGGT
AAAAGCAGTTGAATTATGTTAAATGTTGCCCTTTGCCACGTTAAATTGAACACTGTTTTGGATGCATGTTGAAAGACATGCTTTTATTTT
TTTGTAAAACAATATAGGAGCTGTGTCTACTATTAAAAGTGAAACATTTTGGCATGTTTGTTAATTCTAGTTTCATTTAATAACCTGTAA
GGCACGTAAGTTTAAGCTTTTTTTTTTTTTAAGTTAATGGGAAAAATTTGAGACGCAATACCAATACTTAGGATTTTGGTCTTGGTGTTT
GTATGAAATTCTGAGGCCTTGATTTAAATCTTTCATTGTATTGTGATTTCCTTTTAGGTATATTGCGCTAAGTGAAACTTGTCAAATAAA

>In-frame_ENST00000361346_ENST00000356731_TCGA-IN-AB1X-11A_FOXJ3_chr1_42776720_-_HNRNPH1_chr5_179048398_length(amino acids)=381AA_start in transcript=342_stop in transcript=1487
MALKKDRETMGHRYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQ
FASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPGAGRGYNSIGRGAGFERMRRGAYGGGYGGYDDYNG
YNDGYGFGSDRFGRDLNYCFSGMSDHRYGDGGSTFQSTTGHCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATH
EDAVAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQMMGGMGLSNQSSYGGPASQQLSGGYGGGYGGQS

--------------------------------------------------------------
>In-frame_ENST00000361346_ENST00000510411_TCGA-IN-AB1X-11A_FOXJ3_chr1_42776720_-_HNRNPH1_chr5_179048398_length(transcript)=2207nt_BP=235nt
AGTTCCGGGTGCGCGGCCCCGGATGTTGGCTGCTCTTGCTGCCGCCGCCGCTCTCGGGGCTGCTCGGGGCCTCGACCGCTCGCAGTAGGC
ACCGTTGGGACCTTTCCCGGGGGGGCGGAGACGCACGGAGCGGCCGGGGGCTCGGCCGGGCCGTCCCGGCCTGCGCAGCCTGAGATTCTC
TTTGTGGCCAGATGGGTTTGTATGGACAGGCTTGTCCATCTGTAACTTCATTAAGACTGCAAAATTCAAAATGGGGCTCAAGGTATTCGT
TTCATCTACACCAGAGAAGGCAGACCAAGTGGCGAGGCTTTTGTTGAACTTGAATCAGAAGATGAAGTCAAATTGGCCCTGAAAAAAGAC
AGAGAAACTATGGGACACAGATATGTTGAAGTATTCAAGTCAAACAACGTTGAAATGGATTGGGTGTTGAAGCATACTGGTCCAAATAGT
CCTGACACGGCCAATGATGGCTTTGTACGGCTTAGAGGACTTCCCTTTGGATGTAGCAAGGAAGAAATTGTTCAGTTCTTCTCAGGGTTG
GAAATCGTGCCAAATGGGATAACATTGCCGGTGGACTTCCAGGGGAGGAGTACGGGGGAGGCCTTCGTGCAGTTTGCTTCACAGGAAATA
GCTGAAAAGGCTCTAAAGAAACACAAGGAAAGAATAGGGCACAGGTATATTGAAATCTTTAAGAGCAGTAGAGCTGAAGTTAGAACTCAT
TATGATCCACCACGAAAGCTTATGGCCATGCAGCGGCCAGGTCCTTATGACAGACCTGGGGCTGGTAGAGGGTATAACAGCATTGGCAGA
GGAGCTGGCTTTGAGAGGATGAGGCGTGGTGCTTATGGTGGAGGCTATGGAGGCTATGATGATTACAATGGCTATAATGATGGCTATGGA
TTTGGGTCAGATAGATTTGGAAGAGACCTCAATTACTGTTTTTCAGGAATGTCTGATCACAGATACGGGGATGGTGGCTCTACTTTCCAG
AGCACAACAGGACACTGTGTACACATGCGGGGATTACCTTACAGAGCTACTGAGAATGACATTTATAATTTTTTTTCACCGCTCAACCCT
GTGAGAGTACACATTGAAATTGGTCCTGATGGCAGAGTAACTGGTGAAGCAGATGTCGAGTTCGCAACTCATGAAGATGCTGTGGCAGCT
ATGTCAAAAGACAAAGCAAATATGCAACACAGATATGTAGAACTCTTCTTGAATTCTACAGCAGGAGCAAGCGGTGGTGCTTACGGTAGC
CAAATGCTAGGAGGCATGGGTTTGTCAAACCAGTCCAGCTACGGGGGCCCAGCCAGCCAGCAGCTGAGTGGGGGTTACGGAGGCGGCTAC
GGTGGCCAGAGCAGCATGAGTGGATACGACCAAGTTTTACAGGAAAACTCCAGTGATTTTCAATCAAACATTGCATAGGTAACCAAGGAG
CAGTGAACAGCAGCTACTACAGTAGTGGAAGCCGTGCATCTATGGGCGTGAACGGAATGGGAGGGTTGTCTAGCATGTCCAGTATGAGTG
GTGGATGGGGAATGTAATTGATCGATCCTGATCACTGACTCTTGGTCAACCTTTTTTTTTTTTTTTTTTTTTTCTTTAAGAAAACTTCAG
TTTAACAGTTTCTGCAATACAAGCTTGTGATTTATGCTTACTCTAAGTGGAAATCAGGATTGTTATGAAGACTTAAGGCCCAGTATTTTT
GAATACAATACTCATCTAGGATGTAACAGTGAAGCTGAGTAAACTATAACTGTTAAACTTAAGTTCCAGCTTTTCTCAAGTTAGTTATAG
GATGTACTTAAGCAGTAAGCGTATTTAGGTAAAAGCAGTTGAATTATGTTAAATGTTGCCCTTTGCCACGTTAAATTGAACACTGTTTTG
GATGCATGTTGAAAGACATGCTTTTATTTTTTTGTAAAACAATATAGGAGCTGTGTCTACTATTAAAAGTGAAACATTTTGGCATGTTTG
TTAATTCTAGTTTCATTTAATAACCTGTAAGGCACGTAAGTTTAAGCTTTTTTTTTTTTTAAGTTAATGGGAAAAATTTGAGACGCAATA
CCAATACTTAGGATTTTGGTCTTGGTGTTTGTATGAAATTCTGAGGCCTTGATTTAAATCTTTCATTGTATTGTGATTTCCTTTTAGGTA

>In-frame_ENST00000361346_ENST00000510411_TCGA-IN-AB1X-11A_FOXJ3_chr1_42776720_-_HNRNPH1_chr5_179048398_length(amino acids)=361AA_start in transcript=342_stop in transcript=1427
MALKKDRETMGHRYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQ
FASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPGAGRGYNSIGRGAGFERMRRGAYGGGYGGYDDYNG
YNDGYGFGSDRFGRDLNYCFSGMSDHRYGDGGSTFQSTTGHCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATH
EDAVAAMSKDKANMQHRYVELFLNSTAGASGGAYGSQMLGGMGLSNQSSYGGPASQQLSGGYGGGYGGQSSMSGYDQVLQENSSDFQSNI

--------------------------------------------------------------
>In-frame_ENST00000361776_ENST00000356731_TCGA-IN-AB1X-11A_FOXJ3_chr1_42776720_-_HNRNPH1_chr5_179048398_length(transcript)=2269nt_BP=235nt
AGTTCCGGGTGCGCGGCCCCGGATGTTGGCTGCTCTTGCTGCCGCCGCCGCTCTCGGGGCTGCTCGGGGCCTCGACCGCTCGCAGTAGGC
ACCGTTGGGACCTTTCCCGGGGGGGCGGAGACGCACGGAGCGGCCGGGGGCTCGGCCGGGCCGTCCCGGCCTGCGCAGCCTGAGATTCTC
TTTGTGGCCAGATGGGTTTGTATGGACAGGCTTGTCCATCTGTAACTTCATTAAGACTGCAAAATTCAAAATGGGGCTCAAGGTATTCGT
TTCATCTACACCAGAGAAGGCAGACCAAGTGGCGAGGCTTTTGTTGAACTTGAATCAGAAGATGAAGTCAAATTGGCCCTGAAAAAAGAC
AGAGAAACTATGGGACACAGATATGTTGAAGTATTCAAGTCAAACAACGTTGAAATGGATTGGGTGTTGAAGCATACTGGTCCAAATAGT
CCTGACACGGCCAATGATGGCTTTGTACGGCTTAGAGGACTTCCCTTTGGATGTAGCAAGGAAGAAATTGTTCAGTTCTTCTCAGGGTTG
GAAATCGTGCCAAATGGGATAACATTGCCGGTGGACTTCCAGGGGAGGAGTACGGGGGAGGCCTTCGTGCAGTTTGCTTCACAGGAAATA
GCTGAAAAGGCTCTAAAGAAACACAAGGAAAGAATAGGGCACAGGTATATTGAAATCTTTAAGAGCAGTAGAGCTGAAGTTAGAACTCAT
TATGATCCACCACGAAAGCTTATGGCCATGCAGCGGCCAGGTCCTTATGACAGACCTGGGGCTGGTAGAGGGTATAACAGCATTGGCAGA
GGAGCTGGCTTTGAGAGGATGAGGCGTGGTGCTTATGGTGGAGGCTATGGAGGCTATGATGATTACAATGGCTATAATGATGGCTATGGA
TTTGGGTCAGATAGATTTGGAAGAGACCTCAATTACTGTTTTTCAGGAATGTCTGATCACAGATACGGGGATGGTGGCTCTACTTTCCAG
AGCACAACAGGACACTGTGTACACATGCGGGGATTACCTTACAGAGCTACTGAGAATGACATTTATAATTTTTTTTCACCGCTCAACCCT
GTGAGAGTACACATTGAAATTGGTCCTGATGGCAGAGTAACTGGTGAAGCAGATGTCGAGTTCGCAACTCATGAAGATGCTGTGGCAGCT
ATGTCAAAAGACAAAGCAAATATGCAACACAGATATGTAGAACTCTTCTTGAATTCTACAGCAGGAGCAAGCGGTGGTGCTTACGAACAC
AGATATGTAGAACTCTTCTTGAATTCTACAGCAGGAGCAAGCGGTGGTGCTTATGGTAGCCAAATGATGGGAGGCATGGGCTTGTCAAAC
CAGTCCAGCTACGGGGGCCCAGCCAGCCAGCAGCTGAGTGGGGGTTACGGAGGCGGCTACGGTGGCCAGAGCAGCATGAGTGGATACGAC
CAAGTTTTACAGGAAAACTCCAGTGATTTTCAATCAAACATTGCATAGGTAACCAAGGAGCAGTGAACAGCAGCTACTACAGTAGTGGAA
GCCGTGCATCTATGGGCGTGAACGGAATGGGAGGGTTGTCTAGCATGTCCAGTATGAGTGGTGGATGGGGAATGTAATTGATCGATCCTG
ATCACTGACTCTTGGTCAACCTTTTTTTTTTTTTTTTTTTTTTCTTTAAGAAAACTTCAGTTTAACAGTTTCTGCAATACAAGCTTGTGA
TTTATGCTTACTCTAAGTGGAAATCAGGATTGTTATGAAGACTTAAGGCCCAGTATTTTTGAATACAATACTCATCTAGGATGTAACAGT
GAAGCTGAGTAAACTATAACTGTTAAACTTAAGTTCCAGCTTTTCTCAAGTTAGTTATAGGATGTACTTAAGCAGTAAGCGTATTTAGGT
AAAAGCAGTTGAATTATGTTAAATGTTGCCCTTTGCCACGTTAAATTGAACACTGTTTTGGATGCATGTTGAAAGACATGCTTTTATTTT
TTTGTAAAACAATATAGGAGCTGTGTCTACTATTAAAAGTGAAACATTTTGGCATGTTTGTTAATTCTAGTTTCATTTAATAACCTGTAA
GGCACGTAAGTTTAAGCTTTTTTTTTTTTTAAGTTAATGGGAAAAATTTGAGACGCAATACCAATACTTAGGATTTTGGTCTTGGTGTTT
GTATGAAATTCTGAGGCCTTGATTTAAATCTTTCATTGTATTGTGATTTCCTTTTAGGTATATTGCGCTAAGTGAAACTTGTCAAATAAA

>In-frame_ENST00000361776_ENST00000356731_TCGA-IN-AB1X-11A_FOXJ3_chr1_42776720_-_HNRNPH1_chr5_179048398_length(amino acids)=381AA_start in transcript=342_stop in transcript=1487
MALKKDRETMGHRYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQ
FASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPGAGRGYNSIGRGAGFERMRRGAYGGGYGGYDDYNG
YNDGYGFGSDRFGRDLNYCFSGMSDHRYGDGGSTFQSTTGHCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATH
EDAVAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQMMGGMGLSNQSSYGGPASQQLSGGYGGGYGGQS

--------------------------------------------------------------
>In-frame_ENST00000361776_ENST00000510411_TCGA-IN-AB1X-11A_FOXJ3_chr1_42776720_-_HNRNPH1_chr5_179048398_length(transcript)=2207nt_BP=235nt
AGTTCCGGGTGCGCGGCCCCGGATGTTGGCTGCTCTTGCTGCCGCCGCCGCTCTCGGGGCTGCTCGGGGCCTCGACCGCTCGCAGTAGGC
ACCGTTGGGACCTTTCCCGGGGGGGCGGAGACGCACGGAGCGGCCGGGGGCTCGGCCGGGCCGTCCCGGCCTGCGCAGCCTGAGATTCTC
TTTGTGGCCAGATGGGTTTGTATGGACAGGCTTGTCCATCTGTAACTTCATTAAGACTGCAAAATTCAAAATGGGGCTCAAGGTATTCGT
TTCATCTACACCAGAGAAGGCAGACCAAGTGGCGAGGCTTTTGTTGAACTTGAATCAGAAGATGAAGTCAAATTGGCCCTGAAAAAAGAC
AGAGAAACTATGGGACACAGATATGTTGAAGTATTCAAGTCAAACAACGTTGAAATGGATTGGGTGTTGAAGCATACTGGTCCAAATAGT
CCTGACACGGCCAATGATGGCTTTGTACGGCTTAGAGGACTTCCCTTTGGATGTAGCAAGGAAGAAATTGTTCAGTTCTTCTCAGGGTTG
GAAATCGTGCCAAATGGGATAACATTGCCGGTGGACTTCCAGGGGAGGAGTACGGGGGAGGCCTTCGTGCAGTTTGCTTCACAGGAAATA
GCTGAAAAGGCTCTAAAGAAACACAAGGAAAGAATAGGGCACAGGTATATTGAAATCTTTAAGAGCAGTAGAGCTGAAGTTAGAACTCAT
TATGATCCACCACGAAAGCTTATGGCCATGCAGCGGCCAGGTCCTTATGACAGACCTGGGGCTGGTAGAGGGTATAACAGCATTGGCAGA
GGAGCTGGCTTTGAGAGGATGAGGCGTGGTGCTTATGGTGGAGGCTATGGAGGCTATGATGATTACAATGGCTATAATGATGGCTATGGA
TTTGGGTCAGATAGATTTGGAAGAGACCTCAATTACTGTTTTTCAGGAATGTCTGATCACAGATACGGGGATGGTGGCTCTACTTTCCAG
AGCACAACAGGACACTGTGTACACATGCGGGGATTACCTTACAGAGCTACTGAGAATGACATTTATAATTTTTTTTCACCGCTCAACCCT
GTGAGAGTACACATTGAAATTGGTCCTGATGGCAGAGTAACTGGTGAAGCAGATGTCGAGTTCGCAACTCATGAAGATGCTGTGGCAGCT
ATGTCAAAAGACAAAGCAAATATGCAACACAGATATGTAGAACTCTTCTTGAATTCTACAGCAGGAGCAAGCGGTGGTGCTTACGGTAGC
CAAATGCTAGGAGGCATGGGTTTGTCAAACCAGTCCAGCTACGGGGGCCCAGCCAGCCAGCAGCTGAGTGGGGGTTACGGAGGCGGCTAC
GGTGGCCAGAGCAGCATGAGTGGATACGACCAAGTTTTACAGGAAAACTCCAGTGATTTTCAATCAAACATTGCATAGGTAACCAAGGAG
CAGTGAACAGCAGCTACTACAGTAGTGGAAGCCGTGCATCTATGGGCGTGAACGGAATGGGAGGGTTGTCTAGCATGTCCAGTATGAGTG
GTGGATGGGGAATGTAATTGATCGATCCTGATCACTGACTCTTGGTCAACCTTTTTTTTTTTTTTTTTTTTTTCTTTAAGAAAACTTCAG
TTTAACAGTTTCTGCAATACAAGCTTGTGATTTATGCTTACTCTAAGTGGAAATCAGGATTGTTATGAAGACTTAAGGCCCAGTATTTTT
GAATACAATACTCATCTAGGATGTAACAGTGAAGCTGAGTAAACTATAACTGTTAAACTTAAGTTCCAGCTTTTCTCAAGTTAGTTATAG
GATGTACTTAAGCAGTAAGCGTATTTAGGTAAAAGCAGTTGAATTATGTTAAATGTTGCCCTTTGCCACGTTAAATTGAACACTGTTTTG
GATGCATGTTGAAAGACATGCTTTTATTTTTTTGTAAAACAATATAGGAGCTGTGTCTACTATTAAAAGTGAAACATTTTGGCATGTTTG
TTAATTCTAGTTTCATTTAATAACCTGTAAGGCACGTAAGTTTAAGCTTTTTTTTTTTTTAAGTTAATGGGAAAAATTTGAGACGCAATA
CCAATACTTAGGATTTTGGTCTTGGTGTTTGTATGAAATTCTGAGGCCTTGATTTAAATCTTTCATTGTATTGTGATTTCCTTTTAGGTA

>In-frame_ENST00000361776_ENST00000510411_TCGA-IN-AB1X-11A_FOXJ3_chr1_42776720_-_HNRNPH1_chr5_179048398_length(amino acids)=361AA_start in transcript=342_stop in transcript=1427
MALKKDRETMGHRYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQ
FASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPGAGRGYNSIGRGAGFERMRRGAYGGGYGGYDDYNG
YNDGYGFGSDRFGRDLNYCFSGMSDHRYGDGGSTFQSTTGHCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATH
EDAVAAMSKDKANMQHRYVELFLNSTAGASGGAYGSQMLGGMGLSNQSSYGGPASQQLSGGYGGGYGGQSSMSGYDQVLQENSSDFQSNI

--------------------------------------------------------------
>In-frame_ENST00000545068_ENST00000356731_TCGA-IN-AB1X-11A_FOXJ3_chr1_42776720_-_HNRNPH1_chr5_179048398_length(transcript)=2209nt_BP=175nt
ACAGTTTAGTATGAGATCATTTTCCCTTGCCTGAGTTTTGAGCTGATTGAGAAATAAGAACCTACAGATGAAGAAGCAAGACAGTACCTT
TAAAAAAATTAGCTTTTTATTCAGATTCTCTTTGTGGCCAGATGGGTTTGTATGGACAGGCTTGTCCATCTGTAACTTCATTAAGACTGC
AAAATTCAAAATGGGGCTCAAGGTATTCGTTTCATCTACACCAGAGAAGGCAGACCAAGTGGCGAGGCTTTTGTTGAACTTGAATCAGAA
GATGAAGTCAAATTGGCCCTGAAAAAAGACAGAGAAACTATGGGACACAGATATGTTGAAGTATTCAAGTCAAACAACGTTGAAATGGAT
TGGGTGTTGAAGCATACTGGTCCAAATAGTCCTGACACGGCCAATGATGGCTTTGTACGGCTTAGAGGACTTCCCTTTGGATGTAGCAAG
GAAGAAATTGTTCAGTTCTTCTCAGGGTTGGAAATCGTGCCAAATGGGATAACATTGCCGGTGGACTTCCAGGGGAGGAGTACGGGGGAG
GCCTTCGTGCAGTTTGCTTCACAGGAAATAGCTGAAAAGGCTCTAAAGAAACACAAGGAAAGAATAGGGCACAGGTATATTGAAATCTTT
AAGAGCAGTAGAGCTGAAGTTAGAACTCATTATGATCCACCACGAAAGCTTATGGCCATGCAGCGGCCAGGTCCTTATGACAGACCTGGG
GCTGGTAGAGGGTATAACAGCATTGGCAGAGGAGCTGGCTTTGAGAGGATGAGGCGTGGTGCTTATGGTGGAGGCTATGGAGGCTATGAT
GATTACAATGGCTATAATGATGGCTATGGATTTGGGTCAGATAGATTTGGAAGAGACCTCAATTACTGTTTTTCAGGAATGTCTGATCAC
AGATACGGGGATGGTGGCTCTACTTTCCAGAGCACAACAGGACACTGTGTACACATGCGGGGATTACCTTACAGAGCTACTGAGAATGAC
ATTTATAATTTTTTTTCACCGCTCAACCCTGTGAGAGTACACATTGAAATTGGTCCTGATGGCAGAGTAACTGGTGAAGCAGATGTCGAG
TTCGCAACTCATGAAGATGCTGTGGCAGCTATGTCAAAAGACAAAGCAAATATGCAACACAGATATGTAGAACTCTTCTTGAATTCTACA
GCAGGAGCAAGCGGTGGTGCTTACGAACACAGATATGTAGAACTCTTCTTGAATTCTACAGCAGGAGCAAGCGGTGGTGCTTATGGTAGC
CAAATGATGGGAGGCATGGGCTTGTCAAACCAGTCCAGCTACGGGGGCCCAGCCAGCCAGCAGCTGAGTGGGGGTTACGGAGGCGGCTAC
GGTGGCCAGAGCAGCATGAGTGGATACGACCAAGTTTTACAGGAAAACTCCAGTGATTTTCAATCAAACATTGCATAGGTAACCAAGGAG
CAGTGAACAGCAGCTACTACAGTAGTGGAAGCCGTGCATCTATGGGCGTGAACGGAATGGGAGGGTTGTCTAGCATGTCCAGTATGAGTG
GTGGATGGGGAATGTAATTGATCGATCCTGATCACTGACTCTTGGTCAACCTTTTTTTTTTTTTTTTTTTTTTCTTTAAGAAAACTTCAG
TTTAACAGTTTCTGCAATACAAGCTTGTGATTTATGCTTACTCTAAGTGGAAATCAGGATTGTTATGAAGACTTAAGGCCCAGTATTTTT
GAATACAATACTCATCTAGGATGTAACAGTGAAGCTGAGTAAACTATAACTGTTAAACTTAAGTTCCAGCTTTTCTCAAGTTAGTTATAG
GATGTACTTAAGCAGTAAGCGTATTTAGGTAAAAGCAGTTGAATTATGTTAAATGTTGCCCTTTGCCACGTTAAATTGAACACTGTTTTG
GATGCATGTTGAAAGACATGCTTTTATTTTTTTGTAAAACAATATAGGAGCTGTGTCTACTATTAAAAGTGAAACATTTTGGCATGTTTG
TTAATTCTAGTTTCATTTAATAACCTGTAAGGCACGTAAGTTTAAGCTTTTTTTTTTTTTAAGTTAATGGGAAAAATTTGAGACGCAATA
CCAATACTTAGGATTTTGGTCTTGGTGTTTGTATGAAATTCTGAGGCCTTGATTTAAATCTTTCATTGTATTGTGATTTCCTTTTAGGTA

>In-frame_ENST00000545068_ENST00000356731_TCGA-IN-AB1X-11A_FOXJ3_chr1_42776720_-_HNRNPH1_chr5_179048398_length(amino acids)=381AA_start in transcript=282_stop in transcript=1427
MALKKDRETMGHRYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQ
FASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPGAGRGYNSIGRGAGFERMRRGAYGGGYGGYDDYNG
YNDGYGFGSDRFGRDLNYCFSGMSDHRYGDGGSTFQSTTGHCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATH
EDAVAAMSKDKANMQHRYVELFLNSTAGASGGAYEHRYVELFLNSTAGASGGAYGSQMMGGMGLSNQSSYGGPASQQLSGGYGGGYGGQS

--------------------------------------------------------------
>In-frame_ENST00000545068_ENST00000510411_TCGA-IN-AB1X-11A_FOXJ3_chr1_42776720_-_HNRNPH1_chr5_179048398_length(transcript)=2147nt_BP=175nt
ACAGTTTAGTATGAGATCATTTTCCCTTGCCTGAGTTTTGAGCTGATTGAGAAATAAGAACCTACAGATGAAGAAGCAAGACAGTACCTT
TAAAAAAATTAGCTTTTTATTCAGATTCTCTTTGTGGCCAGATGGGTTTGTATGGACAGGCTTGTCCATCTGTAACTTCATTAAGACTGC
AAAATTCAAAATGGGGCTCAAGGTATTCGTTTCATCTACACCAGAGAAGGCAGACCAAGTGGCGAGGCTTTTGTTGAACTTGAATCAGAA
GATGAAGTCAAATTGGCCCTGAAAAAAGACAGAGAAACTATGGGACACAGATATGTTGAAGTATTCAAGTCAAACAACGTTGAAATGGAT
TGGGTGTTGAAGCATACTGGTCCAAATAGTCCTGACACGGCCAATGATGGCTTTGTACGGCTTAGAGGACTTCCCTTTGGATGTAGCAAG
GAAGAAATTGTTCAGTTCTTCTCAGGGTTGGAAATCGTGCCAAATGGGATAACATTGCCGGTGGACTTCCAGGGGAGGAGTACGGGGGAG
GCCTTCGTGCAGTTTGCTTCACAGGAAATAGCTGAAAAGGCTCTAAAGAAACACAAGGAAAGAATAGGGCACAGGTATATTGAAATCTTT
AAGAGCAGTAGAGCTGAAGTTAGAACTCATTATGATCCACCACGAAAGCTTATGGCCATGCAGCGGCCAGGTCCTTATGACAGACCTGGG
GCTGGTAGAGGGTATAACAGCATTGGCAGAGGAGCTGGCTTTGAGAGGATGAGGCGTGGTGCTTATGGTGGAGGCTATGGAGGCTATGAT
GATTACAATGGCTATAATGATGGCTATGGATTTGGGTCAGATAGATTTGGAAGAGACCTCAATTACTGTTTTTCAGGAATGTCTGATCAC
AGATACGGGGATGGTGGCTCTACTTTCCAGAGCACAACAGGACACTGTGTACACATGCGGGGATTACCTTACAGAGCTACTGAGAATGAC
ATTTATAATTTTTTTTCACCGCTCAACCCTGTGAGAGTACACATTGAAATTGGTCCTGATGGCAGAGTAACTGGTGAAGCAGATGTCGAG
TTCGCAACTCATGAAGATGCTGTGGCAGCTATGTCAAAAGACAAAGCAAATATGCAACACAGATATGTAGAACTCTTCTTGAATTCTACA
GCAGGAGCAAGCGGTGGTGCTTACGGTAGCCAAATGCTAGGAGGCATGGGTTTGTCAAACCAGTCCAGCTACGGGGGCCCAGCCAGCCAG
CAGCTGAGTGGGGGTTACGGAGGCGGCTACGGTGGCCAGAGCAGCATGAGTGGATACGACCAAGTTTTACAGGAAAACTCCAGTGATTTT
CAATCAAACATTGCATAGGTAACCAAGGAGCAGTGAACAGCAGCTACTACAGTAGTGGAAGCCGTGCATCTATGGGCGTGAACGGAATGG
GAGGGTTGTCTAGCATGTCCAGTATGAGTGGTGGATGGGGAATGTAATTGATCGATCCTGATCACTGACTCTTGGTCAACCTTTTTTTTT
TTTTTTTTTTTTTCTTTAAGAAAACTTCAGTTTAACAGTTTCTGCAATACAAGCTTGTGATTTATGCTTACTCTAAGTGGAAATCAGGAT
TGTTATGAAGACTTAAGGCCCAGTATTTTTGAATACAATACTCATCTAGGATGTAACAGTGAAGCTGAGTAAACTATAACTGTTAAACTT
AAGTTCCAGCTTTTCTCAAGTTAGTTATAGGATGTACTTAAGCAGTAAGCGTATTTAGGTAAAAGCAGTTGAATTATGTTAAATGTTGCC
CTTTGCCACGTTAAATTGAACACTGTTTTGGATGCATGTTGAAAGACATGCTTTTATTTTTTTGTAAAACAATATAGGAGCTGTGTCTAC
TATTAAAAGTGAAACATTTTGGCATGTTTGTTAATTCTAGTTTCATTTAATAACCTGTAAGGCACGTAAGTTTAAGCTTTTTTTTTTTTT
AAGTTAATGGGAAAAATTTGAGACGCAATACCAATACTTAGGATTTTGGTCTTGGTGTTTGTATGAAATTCTGAGGCCTTGATTTAAATC

>In-frame_ENST00000545068_ENST00000510411_TCGA-IN-AB1X-11A_FOXJ3_chr1_42776720_-_HNRNPH1_chr5_179048398_length(amino acids)=361AA_start in transcript=282_stop in transcript=1367
MALKKDRETMGHRYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQ
FASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPGAGRGYNSIGRGAGFERMRRGAYGGGYGGYDDYNG
YNDGYGFGSDRFGRDLNYCFSGMSDHRYGDGGSTFQSTTGHCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATH
EDAVAAMSKDKANMQHRYVELFLNSTAGASGGAYGSQMLGGMGLSNQSSYGGPASQQLSGGYGGGYGGQSSMSGYDQVLQENSSDFQSNI

--------------------------------------------------------------

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Fusion Gene PPI Analysis for FOXJ3-HNRNPH1


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for FOXJ3-HNRNPH1


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status
TgeneHNRNPH1P31943DB09130CopperSmall moleculeApproved|Investigational
TgeneHNRNPH1P31943DB09130CopperSmall moleculeApproved|Investigational
TgeneHNRNPH1P31943DB09130CopperSmall moleculeApproved|Investigational

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Related Diseases for FOXJ3-HNRNPH1


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
TgeneHNRNPH1C0033578Prostatic Neoplasms1CTD_human
TgeneHNRNPH1C0376358Malignant neoplasm of prostate1CTD_human
TgeneHNRNPH1C1961099Precursor T-Cell Lymphoblastic Leukemia-Lymphoma1ORPHANET