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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:GSN-CNTRL (FusionGDB2 ID:34936) |
Fusion Gene Summary for GSN-CNTRL |
Fusion gene summary |
Fusion gene information | Fusion gene name: GSN-CNTRL | Fusion gene ID: 34936 | Hgene | Tgene | Gene symbol | GSN | CNTRL | Gene ID | 2934 | 11064 |
Gene name | gelsolin | centriolin | |
Synonyms | ADF|AGEL | CEP1|CEP110|FAN|bA165P4.1 | |
Cytomap | 9q33.2 | 9q33.2 | |
Type of gene | protein-coding | protein-coding | |
Description | gelsolinactin-depolymerizing factorbrevinepididymis secretory sperm binding protein | centriolin110 kDa centrosomal proteinbA165P4.1 (ortholog of mouse Ma2a8)bA165P4.2 (centrosomal protein 1)centriole associated proteincentrosomal protein 110kDacentrosomal protein of 110 kDa | |
Modification date | 20200329 | 20200313 | |
UniProtAcc | . | Q7Z7A1 | |
Ensembl transtripts involved in fusion gene | ENST00000373823, ENST00000373808, ENST00000436847, ENST00000449733, ENST00000412819, ENST00000394353, ENST00000341272, ENST00000545652, ENST00000373818, ENST00000485767, ENST00000373807, ENST00000373806, | ENST00000373865, ENST00000373855, ENST00000238341, ENST00000373850, ENST00000373847, ENST00000373845, ENST00000373844, | |
Fusion gene scores | * DoF score | 21 X 16 X 8=2688 | 3 X 3 X 2=18 |
# samples | 24 | 3 | |
** MAII score | log2(24/2688*10)=-3.48542682717024 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/18*10)=0.736965594166206 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: GSN [Title/Abstract] AND CNTRL [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | GSN(124065343)-CNTRL(123852553), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | GSN-CNTRL seems lost the major protein functional domain in Hgene partner, which is a tumor suppressor due to the frame-shifted ORF. GSN-CNTRL seems lost the major protein functional domain in Tgene partner, which is a CGC due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | GSN | GO:0030041 | actin filament polymerization | 3020431 |
Hgene | GSN | GO:0051014 | actin filament severing | 3020431 |
Fusion gene breakpoints across GSN (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across CNTRL (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | STAD | TCGA-BR-8683-01A | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
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Fusion Gene ORF analysis for GSN-CNTRL |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000373823 | ENST00000373865 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
Frame-shift | ENST00000373823 | ENST00000373855 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
Frame-shift | ENST00000373823 | ENST00000238341 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000373823 | ENST00000373850 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000373823 | ENST00000373847 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000373823 | ENST00000373845 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000373823 | ENST00000373844 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
In-frame | ENST00000373808 | ENST00000373865 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
Frame-shift | ENST00000373808 | ENST00000373855 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
Frame-shift | ENST00000373808 | ENST00000238341 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000373808 | ENST00000373850 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000373808 | ENST00000373847 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000373808 | ENST00000373845 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000373808 | ENST00000373844 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
In-frame | ENST00000436847 | ENST00000373865 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
Frame-shift | ENST00000436847 | ENST00000373855 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
Frame-shift | ENST00000436847 | ENST00000238341 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000436847 | ENST00000373850 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000436847 | ENST00000373847 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000436847 | ENST00000373845 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000436847 | ENST00000373844 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
In-frame | ENST00000449733 | ENST00000373865 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
Frame-shift | ENST00000449733 | ENST00000373855 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
Frame-shift | ENST00000449733 | ENST00000238341 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000449733 | ENST00000373850 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000449733 | ENST00000373847 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000449733 | ENST00000373845 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000449733 | ENST00000373844 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
In-frame | ENST00000412819 | ENST00000373865 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
Frame-shift | ENST00000412819 | ENST00000373855 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
Frame-shift | ENST00000412819 | ENST00000238341 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000412819 | ENST00000373850 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000412819 | ENST00000373847 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000412819 | ENST00000373845 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000412819 | ENST00000373844 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
In-frame | ENST00000394353 | ENST00000373865 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
Frame-shift | ENST00000394353 | ENST00000373855 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
Frame-shift | ENST00000394353 | ENST00000238341 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000394353 | ENST00000373850 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000394353 | ENST00000373847 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000394353 | ENST00000373845 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000394353 | ENST00000373844 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
In-frame | ENST00000341272 | ENST00000373865 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
Frame-shift | ENST00000341272 | ENST00000373855 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
Frame-shift | ENST00000341272 | ENST00000238341 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000341272 | ENST00000373850 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000341272 | ENST00000373847 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000341272 | ENST00000373845 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000341272 | ENST00000373844 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
In-frame | ENST00000545652 | ENST00000373865 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
Frame-shift | ENST00000545652 | ENST00000373855 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
Frame-shift | ENST00000545652 | ENST00000238341 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000545652 | ENST00000373850 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000545652 | ENST00000373847 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000545652 | ENST00000373845 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000545652 | ENST00000373844 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
In-frame | ENST00000373818 | ENST00000373865 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
Frame-shift | ENST00000373818 | ENST00000373855 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
Frame-shift | ENST00000373818 | ENST00000238341 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000373818 | ENST00000373850 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000373818 | ENST00000373847 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000373818 | ENST00000373845 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
5CDS-intron | ENST00000373818 | ENST00000373844 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
intron-3CDS | ENST00000485767 | ENST00000373865 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
intron-3CDS | ENST00000485767 | ENST00000373855 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
intron-3CDS | ENST00000485767 | ENST00000238341 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
intron-intron | ENST00000485767 | ENST00000373850 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
intron-intron | ENST00000485767 | ENST00000373847 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
intron-intron | ENST00000485767 | ENST00000373845 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
intron-intron | ENST00000485767 | ENST00000373844 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
intron-3CDS | ENST00000373807 | ENST00000373865 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
intron-3CDS | ENST00000373807 | ENST00000373855 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
intron-3CDS | ENST00000373807 | ENST00000238341 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
intron-intron | ENST00000373807 | ENST00000373850 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
intron-intron | ENST00000373807 | ENST00000373847 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
intron-intron | ENST00000373807 | ENST00000373845 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
intron-intron | ENST00000373807 | ENST00000373844 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
intron-3CDS | ENST00000373806 | ENST00000373865 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
intron-3CDS | ENST00000373806 | ENST00000373855 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
intron-3CDS | ENST00000373806 | ENST00000238341 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
intron-intron | ENST00000373806 | ENST00000373850 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
intron-intron | ENST00000373806 | ENST00000373847 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
intron-intron | ENST00000373806 | ENST00000373845 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
intron-intron | ENST00000373806 | ENST00000373844 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000373823 | GSN | chr9 | 124065343 | + | ENST00000373865 | CNTRL | chr9 | 123852553 | + | 2720 | 1256 | 1327 | 2718 | 464 |
ENST00000373808 | GSN | chr9 | 124065343 | + | ENST00000373865 | CNTRL | chr9 | 123852553 | + | 1942 | 478 | 549 | 1940 | 464 |
ENST00000436847 | GSN | chr9 | 124065343 | + | ENST00000373865 | CNTRL | chr9 | 123852553 | + | 2106 | 642 | 713 | 2104 | 464 |
ENST00000449733 | GSN | chr9 | 124065343 | + | ENST00000373865 | CNTRL | chr9 | 123852553 | + | 2147 | 683 | 754 | 2145 | 464 |
ENST00000412819 | GSN | chr9 | 124065343 | + | ENST00000373865 | CNTRL | chr9 | 123852553 | + | 2114 | 650 | 721 | 2112 | 464 |
ENST00000394353 | GSN | chr9 | 124065343 | + | ENST00000373865 | CNTRL | chr9 | 123852553 | + | 2097 | 633 | 704 | 2095 | 464 |
ENST00000341272 | GSN | chr9 | 124065343 | + | ENST00000373865 | CNTRL | chr9 | 123852553 | + | 2035 | 571 | 642 | 2033 | 464 |
ENST00000545652 | GSN | chr9 | 124065343 | + | ENST00000373865 | CNTRL | chr9 | 123852553 | + | 1994 | 530 | 601 | 1992 | 464 |
ENST00000373818 | GSN | chr9 | 124065343 | + | ENST00000373865 | CNTRL | chr9 | 123852553 | + | 2037 | 573 | 644 | 2035 | 464 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000373823 | ENST00000373865 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + | 0.028898928 | 0.97110105 |
ENST00000373808 | ENST00000373865 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + | 0.017308153 | 0.9826918 |
ENST00000436847 | ENST00000373865 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + | 0.008137311 | 0.99186265 |
ENST00000449733 | ENST00000373865 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + | 0.005344386 | 0.9946556 |
ENST00000412819 | ENST00000373865 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + | 0.011467651 | 0.9885323 |
ENST00000394353 | ENST00000373865 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + | 0.010521895 | 0.98947805 |
ENST00000341272 | ENST00000373865 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + | 0.019601354 | 0.9803986 |
ENST00000545652 | ENST00000373865 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + | 0.016882861 | 0.9831171 |
ENST00000373818 | ENST00000373865 | GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852553 | + | 0.003329691 | 0.9966703 |
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Fusion Genomic Features for GSN-CNTRL |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852552 | + | 0.002391235 | 0.9976088 |
GSN | chr9 | 124065343 | + | CNTRL | chr9 | 123852552 | + | 0.002391235 | 0.9976088 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for GSN-CNTRL |
Go to FGviewer for the breakpoints of chr9:124065343-chr9:123852553 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | CNTRL |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Involved in cell cycle progression and cytokinesis. During the late steps of cytokinesis, anchors exocyst and SNARE complexes at the midbody, thereby allowing secretory vesicle-mediated abscission. {ECO:0000269|PubMed:12732615, ECO:0000269|PubMed:16213214}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373818 | + | 3 | 17 | 123_126 | 168.0 | 783.0 | Region | Note=Actin-actin interfilament contact point |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373818 | + | 3 | 17 | 162_169 | 168.0 | 783.0 | Region | Polyphosphoinositide binding |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000394353 | + | 5 | 19 | 123_126 | 128.0 | 743.0 | Region | Note=Actin-actin interfilament contact point |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000436847 | + | 5 | 19 | 123_126 | 128.0 | 743.0 | Region | Note=Actin-actin interfilament contact point |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373818 | + | 3 | 17 | 76_126 | 168.0 | 783.0 | Repeat | Note=Gelsolin-like 1 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000394353 | + | 5 | 19 | 76_126 | 128.0 | 743.0 | Repeat | Note=Gelsolin-like 1 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000436847 | + | 5 | 19 | 76_126 | 128.0 | 743.0 | Repeat | Note=Gelsolin-like 1 |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000238341 | 0 | 42 | 1317_2255 | 72.33333333333333 | 2326.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000238341 | 0 | 42 | 267_343 | 72.33333333333333 | 2326.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000238341 | 0 | 42 | 435_799 | 72.33333333333333 | 2326.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000238341 | 0 | 42 | 851_1101 | 72.33333333333333 | 2326.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000373850 | 0 | 33 | 1317_2255 | 0 | 1774.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000373850 | 0 | 33 | 267_343 | 0 | 1774.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000373850 | 0 | 33 | 435_799 | 0 | 1774.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000373850 | 0 | 33 | 851_1101 | 0 | 1774.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000373855 | 2 | 44 | 1317_2255 | 72.33333333333333 | 2326.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000373855 | 2 | 44 | 267_343 | 72.33333333333333 | 2326.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000373855 | 2 | 44 | 435_799 | 72.33333333333333 | 2326.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000373855 | 2 | 44 | 851_1101 | 72.33333333333333 | 2326.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000238341 | 0 | 42 | 1147_1150 | 72.33333333333333 | 2326.0 | Compositional bias | Note=Poly-Pro | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000238341 | 0 | 42 | 1236_1307 | 72.33333333333333 | 2326.0 | Compositional bias | Note=Pro-rich | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000238341 | 0 | 42 | 956_959 | 72.33333333333333 | 2326.0 | Compositional bias | Note=Poly-Lys | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000373850 | 0 | 33 | 1147_1150 | 0 | 1774.0 | Compositional bias | Note=Poly-Pro | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000373850 | 0 | 33 | 1236_1307 | 0 | 1774.0 | Compositional bias | Note=Pro-rich | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000373850 | 0 | 33 | 956_959 | 0 | 1774.0 | Compositional bias | Note=Poly-Lys | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000373855 | 2 | 44 | 1147_1150 | 72.33333333333333 | 2326.0 | Compositional bias | Note=Poly-Pro | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000373855 | 2 | 44 | 1236_1307 | 72.33333333333333 | 2326.0 | Compositional bias | Note=Pro-rich | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000373855 | 2 | 44 | 956_959 | 72.33333333333333 | 2326.0 | Compositional bias | Note=Poly-Lys | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000238341 | 0 | 42 | 228_266 | 72.33333333333333 | 2326.0 | Domain | Note=LRRCT | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000373850 | 0 | 33 | 228_266 | 0 | 1774.0 | Domain | Note=LRRCT | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000373855 | 2 | 44 | 228_266 | 72.33333333333333 | 2326.0 | Domain | Note=LRRCT | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000238341 | 0 | 42 | 1948_2118 | 72.33333333333333 | 2326.0 | Region | Note=Required for centrosome localization | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000373850 | 0 | 33 | 1948_2118 | 0 | 1774.0 | Region | Note=Required for centrosome localization | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000373855 | 2 | 44 | 1948_2118 | 72.33333333333333 | 2326.0 | Region | Note=Required for centrosome localization | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000238341 | 0 | 42 | 126_147 | 72.33333333333333 | 2326.0 | Repeat | Note=LRR 1 | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000238341 | 0 | 42 | 148_169 | 72.33333333333333 | 2326.0 | Repeat | Note=LRR 2 | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000238341 | 0 | 42 | 170_191 | 72.33333333333333 | 2326.0 | Repeat | Note=LRR 3 | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000238341 | 0 | 42 | 194_215 | 72.33333333333333 | 2326.0 | Repeat | Note=LRR 4 | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000373850 | 0 | 33 | 126_147 | 0 | 1774.0 | Repeat | Note=LRR 1 | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000373850 | 0 | 33 | 148_169 | 0 | 1774.0 | Repeat | Note=LRR 2 | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000373850 | 0 | 33 | 170_191 | 0 | 1774.0 | Repeat | Note=LRR 3 | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000373850 | 0 | 33 | 194_215 | 0 | 1774.0 | Repeat | Note=LRR 4 | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000373855 | 2 | 44 | 126_147 | 72.33333333333333 | 2326.0 | Repeat | Note=LRR 1 | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000373855 | 2 | 44 | 148_169 | 72.33333333333333 | 2326.0 | Repeat | Note=LRR 2 | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000373855 | 2 | 44 | 170_191 | 72.33333333333333 | 2326.0 | Repeat | Note=LRR 3 | |
Tgene | CNTRL | chr9:124065343 | chr9:123852553 | ENST00000373855 | 2 | 44 | 194_215 | 72.33333333333333 | 2326.0 | Repeat | Note=LRR 4 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000341272 | + | 4 | 18 | 123_126 | 117.0 | 732.0 | Region | Note=Actin-actin interfilament contact point |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000341272 | + | 4 | 18 | 162_169 | 117.0 | 732.0 | Region | Polyphosphoinositide binding |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000341272 | + | 4 | 18 | 188_196 | 117.0 | 732.0 | Region | Polyphosphoinositide binding |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000341272 | + | 4 | 18 | 434_782 | 117.0 | 732.0 | Region | Actin-binding%2C Ca-sensitive |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000341272 | + | 4 | 18 | 53_176 | 117.0 | 732.0 | Region | Actin-severing |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373808 | + | 3 | 17 | 123_126 | 117.0 | 732.0 | Region | Note=Actin-actin interfilament contact point |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373808 | + | 3 | 17 | 162_169 | 117.0 | 732.0 | Region | Polyphosphoinositide binding |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373808 | + | 3 | 17 | 188_196 | 117.0 | 732.0 | Region | Polyphosphoinositide binding |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373808 | + | 3 | 17 | 434_782 | 117.0 | 732.0 | Region | Actin-binding%2C Ca-sensitive |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373808 | + | 3 | 17 | 53_176 | 117.0 | 732.0 | Region | Actin-severing |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373818 | + | 3 | 17 | 188_196 | 168.0 | 783.0 | Region | Polyphosphoinositide binding |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373818 | + | 3 | 17 | 434_782 | 168.0 | 783.0 | Region | Actin-binding%2C Ca-sensitive |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373818 | + | 3 | 17 | 53_176 | 168.0 | 783.0 | Region | Actin-severing |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373823 | + | 11 | 25 | 123_126 | 117.0 | 732.0 | Region | Note=Actin-actin interfilament contact point |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373823 | + | 11 | 25 | 162_169 | 117.0 | 732.0 | Region | Polyphosphoinositide binding |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373823 | + | 11 | 25 | 188_196 | 117.0 | 732.0 | Region | Polyphosphoinositide binding |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373823 | + | 11 | 25 | 434_782 | 117.0 | 732.0 | Region | Actin-binding%2C Ca-sensitive |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373823 | + | 11 | 25 | 53_176 | 117.0 | 732.0 | Region | Actin-severing |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000394353 | + | 5 | 19 | 162_169 | 128.0 | 743.0 | Region | Polyphosphoinositide binding |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000394353 | + | 5 | 19 | 188_196 | 128.0 | 743.0 | Region | Polyphosphoinositide binding |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000394353 | + | 5 | 19 | 434_782 | 128.0 | 743.0 | Region | Actin-binding%2C Ca-sensitive |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000394353 | + | 5 | 19 | 53_176 | 128.0 | 743.0 | Region | Actin-severing |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000412819 | + | 5 | 19 | 123_126 | 117.0 | 732.0 | Region | Note=Actin-actin interfilament contact point |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000412819 | + | 5 | 19 | 162_169 | 117.0 | 732.0 | Region | Polyphosphoinositide binding |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000412819 | + | 5 | 19 | 188_196 | 117.0 | 732.0 | Region | Polyphosphoinositide binding |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000412819 | + | 5 | 19 | 434_782 | 117.0 | 732.0 | Region | Actin-binding%2C Ca-sensitive |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000412819 | + | 5 | 19 | 53_176 | 117.0 | 732.0 | Region | Actin-severing |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000436847 | + | 5 | 19 | 162_169 | 128.0 | 743.0 | Region | Polyphosphoinositide binding |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000436847 | + | 5 | 19 | 188_196 | 128.0 | 743.0 | Region | Polyphosphoinositide binding |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000436847 | + | 5 | 19 | 434_782 | 128.0 | 743.0 | Region | Actin-binding%2C Ca-sensitive |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000436847 | + | 5 | 19 | 53_176 | 128.0 | 743.0 | Region | Actin-severing |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000449733 | + | 5 | 19 | 123_126 | 117.0 | 732.0 | Region | Note=Actin-actin interfilament contact point |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000449733 | + | 5 | 19 | 162_169 | 117.0 | 732.0 | Region | Polyphosphoinositide binding |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000449733 | + | 5 | 19 | 188_196 | 117.0 | 732.0 | Region | Polyphosphoinositide binding |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000449733 | + | 5 | 19 | 434_782 | 117.0 | 732.0 | Region | Actin-binding%2C Ca-sensitive |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000449733 | + | 5 | 19 | 53_176 | 117.0 | 732.0 | Region | Actin-severing |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000341272 | + | 4 | 18 | 198_238 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 2 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000341272 | + | 4 | 18 | 314_356 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 3 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000341272 | + | 4 | 18 | 453_504 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 4 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000341272 | + | 4 | 18 | 576_616 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 5 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000341272 | + | 4 | 18 | 679_721 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 6 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000341272 | + | 4 | 18 | 76_126 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 1 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373808 | + | 3 | 17 | 198_238 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 2 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373808 | + | 3 | 17 | 314_356 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 3 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373808 | + | 3 | 17 | 453_504 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 4 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373808 | + | 3 | 17 | 576_616 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 5 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373808 | + | 3 | 17 | 679_721 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 6 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373808 | + | 3 | 17 | 76_126 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 1 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373818 | + | 3 | 17 | 198_238 | 168.0 | 783.0 | Repeat | Note=Gelsolin-like 2 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373818 | + | 3 | 17 | 314_356 | 168.0 | 783.0 | Repeat | Note=Gelsolin-like 3 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373818 | + | 3 | 17 | 453_504 | 168.0 | 783.0 | Repeat | Note=Gelsolin-like 4 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373818 | + | 3 | 17 | 576_616 | 168.0 | 783.0 | Repeat | Note=Gelsolin-like 5 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373818 | + | 3 | 17 | 679_721 | 168.0 | 783.0 | Repeat | Note=Gelsolin-like 6 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373823 | + | 11 | 25 | 198_238 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 2 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373823 | + | 11 | 25 | 314_356 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 3 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373823 | + | 11 | 25 | 453_504 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 4 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373823 | + | 11 | 25 | 576_616 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 5 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373823 | + | 11 | 25 | 679_721 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 6 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000373823 | + | 11 | 25 | 76_126 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 1 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000394353 | + | 5 | 19 | 198_238 | 128.0 | 743.0 | Repeat | Note=Gelsolin-like 2 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000394353 | + | 5 | 19 | 314_356 | 128.0 | 743.0 | Repeat | Note=Gelsolin-like 3 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000394353 | + | 5 | 19 | 453_504 | 128.0 | 743.0 | Repeat | Note=Gelsolin-like 4 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000394353 | + | 5 | 19 | 576_616 | 128.0 | 743.0 | Repeat | Note=Gelsolin-like 5 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000394353 | + | 5 | 19 | 679_721 | 128.0 | 743.0 | Repeat | Note=Gelsolin-like 6 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000412819 | + | 5 | 19 | 198_238 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 2 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000412819 | + | 5 | 19 | 314_356 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 3 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000412819 | + | 5 | 19 | 453_504 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 4 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000412819 | + | 5 | 19 | 576_616 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 5 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000412819 | + | 5 | 19 | 679_721 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 6 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000412819 | + | 5 | 19 | 76_126 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 1 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000436847 | + | 5 | 19 | 198_238 | 128.0 | 743.0 | Repeat | Note=Gelsolin-like 2 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000436847 | + | 5 | 19 | 314_356 | 128.0 | 743.0 | Repeat | Note=Gelsolin-like 3 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000436847 | + | 5 | 19 | 453_504 | 128.0 | 743.0 | Repeat | Note=Gelsolin-like 4 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000436847 | + | 5 | 19 | 576_616 | 128.0 | 743.0 | Repeat | Note=Gelsolin-like 5 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000436847 | + | 5 | 19 | 679_721 | 128.0 | 743.0 | Repeat | Note=Gelsolin-like 6 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000449733 | + | 5 | 19 | 198_238 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 2 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000449733 | + | 5 | 19 | 314_356 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 3 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000449733 | + | 5 | 19 | 453_504 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 4 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000449733 | + | 5 | 19 | 576_616 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 5 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000449733 | + | 5 | 19 | 679_721 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 6 |
Hgene | GSN | chr9:124065343 | chr9:123852553 | ENST00000449733 | + | 5 | 19 | 76_126 | 117.0 | 732.0 | Repeat | Note=Gelsolin-like 1 |
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Fusion Gene Sequence for GSN-CNTRL |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000373823_ENST00000373865_TCGA-BR-8683-01A_GSN_chr9_124065343_+_CNTRL_chr9_123852553_length(transcript)=2720nt_BP=1256nt GCTGGAGTGCAATGGCACGATATCAGCTCACTGAAGCCTCCACCTCCTGGGCTCAAGCACTCCTCCCACCTCAGCCCCCCAGGTAGCTGA GACTACAGGAATGGATAAAGCACGGAGAGGAACCAAGAATGTGCTCAGAAAAAAATCCTTCCTCACTGAAACCAGGACTAAGGAAAGGAG ATTCCCTTCTACCATCCATGGACTCAGGCTGACGGAGCACGCTGCCTGTCTGTGTCTCTCCGTTTCTCTCTCTGGAACGTTGTCAGATGT CACGGCGGAGGGAAAAGAGACCTGGAATGACTTGCCGAATTTTTAGCCCATAACCAGGCACTGTGTAAACCGCTTTACCTCATTCAGTCT TTGCAATTATACCACAAGGTCACACTGTTTAGAAGGAGAAAGAAGAGCTCGCTGTGAAAAACGCTCCACAATGCTGCAGAGCCTTGTGAA GGTGGAAGAGTACTCTCATCAGCAAACGGCATTCCTTCCATGGAAAATGTCATTGGGAGGAAAGCAGGTTCAAGTGATTCTCCTGCCTCA GCCTCCTGAGTAGCTGGGATTACAGGGACAAACTACAAGGCATTCGATGCTCAACAAATACTTGTGCTGATAACTTCTCTTTCTGAAGCC AGCTCCAGGAGAGGTCTGTAATCAGAAGAGCCCCTGAACCCTGAAGCCTCCTGGGCTGCCCAGCCCAGGCATCTCCTCTCCTCACTCTGG GAAGGAGGTGGTCTTCTGGCAAAAGAAGATATCAAAGTTCTTCCATCAGAGGAGATCCTTATCAGCAAGACATTCACTCTGAGGTAGTGC TCATAGCTCTCTTTGTCCAGTGCTTCGGCCTTGGTCCCAGCGCCTTCCCACGGAGCAGCACTCTTCACCCTGCACAGCCTTGTTAGCCCA ACAGCATGGTGGTGGAACACCCCGAGTTCCTCAAGGCAGGGAAGGAGCCTGGCCTGCAGATCTGGCGTGTGGAGAAGTTCGATCTGGTGC CCGTGCCCACCAACCTTTATGGAGACTTCTTCACGGGCGACGCCTACGTCATCCTGAAGACAGTGCAGCTGAGGAACGGAAATCTGCAGT ATGACCTCCACTACTGGCTGGGCAATGAGTGCAGCCAGGATGAGAGCGGGGCGGCCGCCATCTTTACCGTGCAGCTGGATGACTACCTGA ACGGCCGGGCCGTGCAGCACCGTGAGGTCCAGGGCTTCGAGTCGGCCACCTTCCTAGGCTACTTCAAGTCTGGCCTGAAGTACAAGGAGC TGATTCACATGCAGGAGTTAGATATATTACAGAGGCCCTCATTAAAAAACTTACTAAACAGGATAATTTGGCTTTGATAAAATCTCTGAA CCTTTCACTTTCTAAAGACGGTGGCAAGAAATTTAAGTATATTGAGAATTTGGAAAAATGTGTTAAACTTGAAGTACTGAATCTCAGCTA TAATCTAATAGGGAAGATTGAAAAGTTGGACAAGCTGTTAAAATTACGTGAACTCAACTTATCATATAACAAAATCAGCAAAATTGAAGG CATAGAAAATATGTGTAATCTGCAAAAGCTTAACCTTGCAGGAAATGAAATTGAGCATATTCCAGTATGGTTAGGGAAGAAGTTAAAATC TTTGCGAGTCCTCAATTTGAAAGGCAACAAGATATCATCGCTCCAAGATATAAGCAAGTTGAAACCGCTTCAAGATTTGATTTCTCTGAT CCTAGTTGAAAATCCAGTTGTGACCCTTCCTCATTACCTCCAGTTTACCATTTTCCACCTCCGTTCATTGGAAAGTTTGGAAGGTCAGCC AGTAACCACTCAGGATAGACAGGAGGCTTTTGAGAGATTCAGTTTAGAAGAGGTAGAAAGACTGGAAAGAGACCTAGAAAAAAAGATGAT AGAAACTGAAGAGCTTAAGAGCAAACAAACAAGGTTCCTTGAGGAAATTAAAAATCAAGATAAATTGAATAAATCATTAAAAGAGGAGGC CATGTTACAGAAACAGAGCTGTGAGGAACTCAAGAGTGACTTAAACACAAAAAATGAATTGCTAAAACAGAAGACCATAGAATTAACACG AGCATGTCAGAAGCAATATGAGCTGGAACAGGAATTGGCCTTTTATAAAATTGATGCTAAATTTGAGCCACTAAATTATTATCCATCAGA GTATGCTGAAATTGATAAAGCCCCAGATGAAAGCCCTTACATTGGCAAATCCAGATACAAGAGAAATATGTTTGCCACAGAGAGTTATAT TATTGACAGTGCTCAGGCAGTACAGATCAAGAAGATGGAGCCAGATGAACAACTTAGAAATGATCACATGAACTTGAGAGGCCACACACC ACTGGACACGCAACTGGAAGACAAAGAAAAAAAAATAAGTGCAGCACAAACTCGACTATCAGAACTGCATGATGAAATAGAAAAGGCAGA ACAACAAATTTTGAGAGCTACTGAAGAATTTAAACAACTGGAAGAAGCTATACAACTAAAAAAGATTTCAGAAGCAGGGAAAGACCTTCT TTACAAGCAGTTGAGTGGTAGACTACAACTTGTAAATAAATTACGCCAGGAAGCTCTGGATCTAGAACTGCAGATGGAAAAGCAAAAGCA GGAAATTGCCGGAAAGCAGAAGGAGATTAAGGACCTGCAAATAGCCATAGATAGCCTGGATTCCAAAGACCCAAAACATGTGAGTAAATT >In-frame_ENST00000373823_ENST00000373865_TCGA-BR-8683-01A_GSN_chr9_124065343_+_CNTRL_chr9_123852553_length(amino acids)=464AA_start in transcript=1327_stop in transcript=2718 MALIKSLNLSLSKDGGKKFKYIENLEKCVKLEVLNLSYNLIGKIEKLDKLLKLRELNLSYNKISKIEGIENMCNLQKLNLAGNEIEHIPV WLGKKLKSLRVLNLKGNKISSLQDISKLKPLQDLISLILVENPVVTLPHYLQFTIFHLRSLESLEGQPVTTQDRQEAFERFSLEEVERLE RDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKEEAMLQKQSCEELKSDLNTKNELLKQKTIELTRACQKQYELEQELAFYKIDAKFE PLNYYPSEYAEIDKAPDESPYIGKSRYKRNMFATESYIIDSAQAVQIKKMEPDEQLRNDHMNLRGHTPLDTQLEDKEKKISAAQTRLSEL HDEIEKAEQQILRATEEFKQLEEAIQLKKISEAGKDLLYKQLSGRLQLVNKLRQEALDLELQMEKQKQEIAGKQKEIKDLQIAIDSLDSK -------------------------------------------------------------- >In-frame_ENST00000373808_ENST00000373865_TCGA-BR-8683-01A_GSN_chr9_124065343_+_CNTRL_chr9_123852553_length(transcript)=1942nt_BP=478nt TCCCGCCCGCGCCCTGCCCACCCCGGCCGCGCGCACCACAACGCCCCCGCCCCGCCGCCCGGAACCAGCTGAGCGCAGCTGGACCCAGCA GCCGCTGTCTCCAGTGCCGCAGCAGCAGCCCAACAGCATGGTGGTGGAACACCCCGAGTTCCTCAAGGCAGGGAAGGAGCCTGGCCTGCA GATCTGGCGTGTGGAGAAGTTCGATCTGGTGCCCGTGCCCACCAACCTTTATGGAGACTTCTTCACGGGCGACGCCTACGTCATCCTGAA GACAGTGCAGCTGAGGAACGGAAATCTGCAGTATGACCTCCACTACTGGCTGGGCAATGAGTGCAGCCAGGATGAGAGCGGGGCGGCCGC CATCTTTACCGTGCAGCTGGATGACTACCTGAACGGCCGGGCCGTGCAGCACCGTGAGGTCCAGGGCTTCGAGTCGGCCACCTTCCTAGG CTACTTCAAGTCTGGCCTGAAGTACAAGGAGCTGATTCACATGCAGGAGTTAGATATATTACAGAGGCCCTCATTAAAAAACTTACTAAA CAGGATAATTTGGCTTTGATAAAATCTCTGAACCTTTCACTTTCTAAAGACGGTGGCAAGAAATTTAAGTATATTGAGAATTTGGAAAAA TGTGTTAAACTTGAAGTACTGAATCTCAGCTATAATCTAATAGGGAAGATTGAAAAGTTGGACAAGCTGTTAAAATTACGTGAACTCAAC TTATCATATAACAAAATCAGCAAAATTGAAGGCATAGAAAATATGTGTAATCTGCAAAAGCTTAACCTTGCAGGAAATGAAATTGAGCAT ATTCCAGTATGGTTAGGGAAGAAGTTAAAATCTTTGCGAGTCCTCAATTTGAAAGGCAACAAGATATCATCGCTCCAAGATATAAGCAAG TTGAAACCGCTTCAAGATTTGATTTCTCTGATCCTAGTTGAAAATCCAGTTGTGACCCTTCCTCATTACCTCCAGTTTACCATTTTCCAC CTCCGTTCATTGGAAAGTTTGGAAGGTCAGCCAGTAACCACTCAGGATAGACAGGAGGCTTTTGAGAGATTCAGTTTAGAAGAGGTAGAA AGACTGGAAAGAGACCTAGAAAAAAAGATGATAGAAACTGAAGAGCTTAAGAGCAAACAAACAAGGTTCCTTGAGGAAATTAAAAATCAA GATAAATTGAATAAATCATTAAAAGAGGAGGCCATGTTACAGAAACAGAGCTGTGAGGAACTCAAGAGTGACTTAAACACAAAAAATGAA TTGCTAAAACAGAAGACCATAGAATTAACACGAGCATGTCAGAAGCAATATGAGCTGGAACAGGAATTGGCCTTTTATAAAATTGATGCT AAATTTGAGCCACTAAATTATTATCCATCAGAGTATGCTGAAATTGATAAAGCCCCAGATGAAAGCCCTTACATTGGCAAATCCAGATAC AAGAGAAATATGTTTGCCACAGAGAGTTATATTATTGACAGTGCTCAGGCAGTACAGATCAAGAAGATGGAGCCAGATGAACAACTTAGA AATGATCACATGAACTTGAGAGGCCACACACCACTGGACACGCAACTGGAAGACAAAGAAAAAAAAATAAGTGCAGCACAAACTCGACTA TCAGAACTGCATGATGAAATAGAAAAGGCAGAACAACAAATTTTGAGAGCTACTGAAGAATTTAAACAACTGGAAGAAGCTATACAACTA AAAAAGATTTCAGAAGCAGGGAAAGACCTTCTTTACAAGCAGTTGAGTGGTAGACTACAACTTGTAAATAAATTACGCCAGGAAGCTCTG GATCTAGAACTGCAGATGGAAAAGCAAAAGCAGGAAATTGCCGGAAAGCAGAAGGAGATTAAGGACCTGCAAATAGCCATAGATAGCCTG >In-frame_ENST00000373808_ENST00000373865_TCGA-BR-8683-01A_GSN_chr9_124065343_+_CNTRL_chr9_123852553_length(amino acids)=464AA_start in transcript=549_stop in transcript=1940 MALIKSLNLSLSKDGGKKFKYIENLEKCVKLEVLNLSYNLIGKIEKLDKLLKLRELNLSYNKISKIEGIENMCNLQKLNLAGNEIEHIPV WLGKKLKSLRVLNLKGNKISSLQDISKLKPLQDLISLILVENPVVTLPHYLQFTIFHLRSLESLEGQPVTTQDRQEAFERFSLEEVERLE RDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKEEAMLQKQSCEELKSDLNTKNELLKQKTIELTRACQKQYELEQELAFYKIDAKFE PLNYYPSEYAEIDKAPDESPYIGKSRYKRNMFATESYIIDSAQAVQIKKMEPDEQLRNDHMNLRGHTPLDTQLEDKEKKISAAQTRLSEL HDEIEKAEQQILRATEEFKQLEEAIQLKKISEAGKDLLYKQLSGRLQLVNKLRQEALDLELQMEKQKQEIAGKQKEIKDLQIAIDSLDSK -------------------------------------------------------------- >In-frame_ENST00000436847_ENST00000373865_TCGA-BR-8683-01A_GSN_chr9_124065343_+_CNTRL_chr9_123852553_length(transcript)=2106nt_BP=642nt TCCCGCCCGCGCCCTGCCCACCCCGGCCGCGCGCACCACAACGCCCCCGCCCCGCCGCCCGGAACCAGCTGAGCGCAGCTGGACCCAGCA GCCGCTGTCTCCAGTGCCGCAGCAGCAGGTAGTGCTCATAGCTCTCTTTGTCCAGTGCTTCGGCCTTGGTCCCAGCGCCTTCCCACGGAG CAGCACTCTTCACCCTGCACAGCCTTGTTAGTTCTTGCAGATACAGCGCTAGGAAAAGGGGAGTAATTCAGGTCTAGAATGGAAAAACTG TTTTGTTGCTTTCCCAACAGCATGGTGGTGGAACACCCCGAGTTCCTCAAGGCAGGGAAGGAGCCTGGCCTGCAGATCTGGCGTGTGGAG AAGTTCGATCTGGTGCCCGTGCCCACCAACCTTTATGGAGACTTCTTCACGGGCGACGCCTACGTCATCCTGAAGACAGTGCAGCTGAGG AACGGAAATCTGCAGTATGACCTCCACTACTGGCTGGGCAATGAGTGCAGCCAGGATGAGAGCGGGGCGGCCGCCATCTTTACCGTGCAG CTGGATGACTACCTGAACGGCCGGGCCGTGCAGCACCGTGAGGTCCAGGGCTTCGAGTCGGCCACCTTCCTAGGCTACTTCAAGTCTGGC CTGAAGTACAAGGAGCTGATTCACATGCAGGAGTTAGATATATTACAGAGGCCCTCATTAAAAAACTTACTAAACAGGATAATTTGGCTT TGATAAAATCTCTGAACCTTTCACTTTCTAAAGACGGTGGCAAGAAATTTAAGTATATTGAGAATTTGGAAAAATGTGTTAAACTTGAAG TACTGAATCTCAGCTATAATCTAATAGGGAAGATTGAAAAGTTGGACAAGCTGTTAAAATTACGTGAACTCAACTTATCATATAACAAAA TCAGCAAAATTGAAGGCATAGAAAATATGTGTAATCTGCAAAAGCTTAACCTTGCAGGAAATGAAATTGAGCATATTCCAGTATGGTTAG GGAAGAAGTTAAAATCTTTGCGAGTCCTCAATTTGAAAGGCAACAAGATATCATCGCTCCAAGATATAAGCAAGTTGAAACCGCTTCAAG ATTTGATTTCTCTGATCCTAGTTGAAAATCCAGTTGTGACCCTTCCTCATTACCTCCAGTTTACCATTTTCCACCTCCGTTCATTGGAAA GTTTGGAAGGTCAGCCAGTAACCACTCAGGATAGACAGGAGGCTTTTGAGAGATTCAGTTTAGAAGAGGTAGAAAGACTGGAAAGAGACC TAGAAAAAAAGATGATAGAAACTGAAGAGCTTAAGAGCAAACAAACAAGGTTCCTTGAGGAAATTAAAAATCAAGATAAATTGAATAAAT CATTAAAAGAGGAGGCCATGTTACAGAAACAGAGCTGTGAGGAACTCAAGAGTGACTTAAACACAAAAAATGAATTGCTAAAACAGAAGA CCATAGAATTAACACGAGCATGTCAGAAGCAATATGAGCTGGAACAGGAATTGGCCTTTTATAAAATTGATGCTAAATTTGAGCCACTAA ATTATTATCCATCAGAGTATGCTGAAATTGATAAAGCCCCAGATGAAAGCCCTTACATTGGCAAATCCAGATACAAGAGAAATATGTTTG CCACAGAGAGTTATATTATTGACAGTGCTCAGGCAGTACAGATCAAGAAGATGGAGCCAGATGAACAACTTAGAAATGATCACATGAACT TGAGAGGCCACACACCACTGGACACGCAACTGGAAGACAAAGAAAAAAAAATAAGTGCAGCACAAACTCGACTATCAGAACTGCATGATG AAATAGAAAAGGCAGAACAACAAATTTTGAGAGCTACTGAAGAATTTAAACAACTGGAAGAAGCTATACAACTAAAAAAGATTTCAGAAG CAGGGAAAGACCTTCTTTACAAGCAGTTGAGTGGTAGACTACAACTTGTAAATAAATTACGCCAGGAAGCTCTGGATCTAGAACTGCAGA TGGAAAAGCAAAAGCAGGAAATTGCCGGAAAGCAGAAGGAGATTAAGGACCTGCAAATAGCCATAGATAGCCTGGATTCCAAAGACCCAA >In-frame_ENST00000436847_ENST00000373865_TCGA-BR-8683-01A_GSN_chr9_124065343_+_CNTRL_chr9_123852553_length(amino acids)=464AA_start in transcript=713_stop in transcript=2104 MALIKSLNLSLSKDGGKKFKYIENLEKCVKLEVLNLSYNLIGKIEKLDKLLKLRELNLSYNKISKIEGIENMCNLQKLNLAGNEIEHIPV WLGKKLKSLRVLNLKGNKISSLQDISKLKPLQDLISLILVENPVVTLPHYLQFTIFHLRSLESLEGQPVTTQDRQEAFERFSLEEVERLE RDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKEEAMLQKQSCEELKSDLNTKNELLKQKTIELTRACQKQYELEQELAFYKIDAKFE PLNYYPSEYAEIDKAPDESPYIGKSRYKRNMFATESYIIDSAQAVQIKKMEPDEQLRNDHMNLRGHTPLDTQLEDKEKKISAAQTRLSEL HDEIEKAEQQILRATEEFKQLEEAIQLKKISEAGKDLLYKQLSGRLQLVNKLRQEALDLELQMEKQKQEIAGKQKEIKDLQIAIDSLDSK -------------------------------------------------------------- >In-frame_ENST00000449733_ENST00000373865_TCGA-BR-8683-01A_GSN_chr9_124065343_+_CNTRL_chr9_123852553_length(transcript)=2147nt_BP=683nt TCCCGCCCGCGCCCTGCCCACCCCGGCCGCGCGCACCACAACGCCCCCGCCCCGCCGCCCGGAACCAGCTGAGCGCAGCTGGACCCAGCA GCCGCTGTCTCCAGTGCCGCAGCAGCAGGTAGTGCTCATAGCTCTCTTTGTCCAGTGCTTCGGCCTTGGTCCCAGCGCCTTCCCACGGAG CAGCACTCTTCACCCTGCACAGCCTTGTTAGGAGAAGGGGATGAATGAATACAGGACTTACGCGTCTGCTGTGGCCCAGCTGGCTTCCAG ATGGTGACATGAGCCACCCACAGCCGGAGCTGTTCCTCTTTCCCAAAGCTCAGCCCAACAGCATGGTGGTGGAACACCCCGAGTTCCTCA AGGCAGGGAAGGAGCCTGGCCTGCAGATCTGGCGTGTGGAGAAGTTCGATCTGGTGCCCGTGCCCACCAACCTTTATGGAGACTTCTTCA CGGGCGACGCCTACGTCATCCTGAAGACAGTGCAGCTGAGGAACGGAAATCTGCAGTATGACCTCCACTACTGGCTGGGCAATGAGTGCA GCCAGGATGAGAGCGGGGCGGCCGCCATCTTTACCGTGCAGCTGGATGACTACCTGAACGGCCGGGCCGTGCAGCACCGTGAGGTCCAGG GCTTCGAGTCGGCCACCTTCCTAGGCTACTTCAAGTCTGGCCTGAAGTACAAGGAGCTGATTCACATGCAGGAGTTAGATATATTACAGA GGCCCTCATTAAAAAACTTACTAAACAGGATAATTTGGCTTTGATAAAATCTCTGAACCTTTCACTTTCTAAAGACGGTGGCAAGAAATT TAAGTATATTGAGAATTTGGAAAAATGTGTTAAACTTGAAGTACTGAATCTCAGCTATAATCTAATAGGGAAGATTGAAAAGTTGGACAA GCTGTTAAAATTACGTGAACTCAACTTATCATATAACAAAATCAGCAAAATTGAAGGCATAGAAAATATGTGTAATCTGCAAAAGCTTAA CCTTGCAGGAAATGAAATTGAGCATATTCCAGTATGGTTAGGGAAGAAGTTAAAATCTTTGCGAGTCCTCAATTTGAAAGGCAACAAGAT ATCATCGCTCCAAGATATAAGCAAGTTGAAACCGCTTCAAGATTTGATTTCTCTGATCCTAGTTGAAAATCCAGTTGTGACCCTTCCTCA TTACCTCCAGTTTACCATTTTCCACCTCCGTTCATTGGAAAGTTTGGAAGGTCAGCCAGTAACCACTCAGGATAGACAGGAGGCTTTTGA GAGATTCAGTTTAGAAGAGGTAGAAAGACTGGAAAGAGACCTAGAAAAAAAGATGATAGAAACTGAAGAGCTTAAGAGCAAACAAACAAG GTTCCTTGAGGAAATTAAAAATCAAGATAAATTGAATAAATCATTAAAAGAGGAGGCCATGTTACAGAAACAGAGCTGTGAGGAACTCAA GAGTGACTTAAACACAAAAAATGAATTGCTAAAACAGAAGACCATAGAATTAACACGAGCATGTCAGAAGCAATATGAGCTGGAACAGGA ATTGGCCTTTTATAAAATTGATGCTAAATTTGAGCCACTAAATTATTATCCATCAGAGTATGCTGAAATTGATAAAGCCCCAGATGAAAG CCCTTACATTGGCAAATCCAGATACAAGAGAAATATGTTTGCCACAGAGAGTTATATTATTGACAGTGCTCAGGCAGTACAGATCAAGAA GATGGAGCCAGATGAACAACTTAGAAATGATCACATGAACTTGAGAGGCCACACACCACTGGACACGCAACTGGAAGACAAAGAAAAAAA AATAAGTGCAGCACAAACTCGACTATCAGAACTGCATGATGAAATAGAAAAGGCAGAACAACAAATTTTGAGAGCTACTGAAGAATTTAA ACAACTGGAAGAAGCTATACAACTAAAAAAGATTTCAGAAGCAGGGAAAGACCTTCTTTACAAGCAGTTGAGTGGTAGACTACAACTTGT AAATAAATTACGCCAGGAAGCTCTGGATCTAGAACTGCAGATGGAAAAGCAAAAGCAGGAAATTGCCGGAAAGCAGAAGGAGATTAAGGA >In-frame_ENST00000449733_ENST00000373865_TCGA-BR-8683-01A_GSN_chr9_124065343_+_CNTRL_chr9_123852553_length(amino acids)=464AA_start in transcript=754_stop in transcript=2145 MALIKSLNLSLSKDGGKKFKYIENLEKCVKLEVLNLSYNLIGKIEKLDKLLKLRELNLSYNKISKIEGIENMCNLQKLNLAGNEIEHIPV WLGKKLKSLRVLNLKGNKISSLQDISKLKPLQDLISLILVENPVVTLPHYLQFTIFHLRSLESLEGQPVTTQDRQEAFERFSLEEVERLE RDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKEEAMLQKQSCEELKSDLNTKNELLKQKTIELTRACQKQYELEQELAFYKIDAKFE PLNYYPSEYAEIDKAPDESPYIGKSRYKRNMFATESYIIDSAQAVQIKKMEPDEQLRNDHMNLRGHTPLDTQLEDKEKKISAAQTRLSEL HDEIEKAEQQILRATEEFKQLEEAIQLKKISEAGKDLLYKQLSGRLQLVNKLRQEALDLELQMEKQKQEIAGKQKEIKDLQIAIDSLDSK -------------------------------------------------------------- >In-frame_ENST00000412819_ENST00000373865_TCGA-BR-8683-01A_GSN_chr9_124065343_+_CNTRL_chr9_123852553_length(transcript)=2114nt_BP=650nt TCCCGCCCGCGCCCTGCCCACCCCGGCCGCGCGCACCACAACGCCCCCGCCCCGCCGCCCGGAACCAGCTGAGCGCAGCTGGACCCAGCA GCCGCTGTCTCCAGTGCCGCAGCAGCAGGTAGTGCTCATAGCTCTCTTTGTCCAGTGCTTCGGCCTTGGTCCCAGCGCCTTCCCACGGAG CAGCACTCTTCACCCTGCACAGCCTTGTTAGGCCTTGGTTGCTATTCTGTAGAAGAGCAGAGTCCCCATAAAGAGGAGGTGCAGGAATTC TTCCCAGAGGCTTTGGAGAGCCCAACAGCATGGTGGTGGAACACCCCGAGTTCCTCAAGGCAGGGAAGGAGCCTGGCCTGCAGATCTGGC GTGTGGAGAAGTTCGATCTGGTGCCCGTGCCCACCAACCTTTATGGAGACTTCTTCACGGGCGACGCCTACGTCATCCTGAAGACAGTGC AGCTGAGGAACGGAAATCTGCAGTATGACCTCCACTACTGGCTGGGCAATGAGTGCAGCCAGGATGAGAGCGGGGCGGCCGCCATCTTTA CCGTGCAGCTGGATGACTACCTGAACGGCCGGGCCGTGCAGCACCGTGAGGTCCAGGGCTTCGAGTCGGCCACCTTCCTAGGCTACTTCA AGTCTGGCCTGAAGTACAAGGAGCTGATTCACATGCAGGAGTTAGATATATTACAGAGGCCCTCATTAAAAAACTTACTAAACAGGATAA TTTGGCTTTGATAAAATCTCTGAACCTTTCACTTTCTAAAGACGGTGGCAAGAAATTTAAGTATATTGAGAATTTGGAAAAATGTGTTAA ACTTGAAGTACTGAATCTCAGCTATAATCTAATAGGGAAGATTGAAAAGTTGGACAAGCTGTTAAAATTACGTGAACTCAACTTATCATA TAACAAAATCAGCAAAATTGAAGGCATAGAAAATATGTGTAATCTGCAAAAGCTTAACCTTGCAGGAAATGAAATTGAGCATATTCCAGT ATGGTTAGGGAAGAAGTTAAAATCTTTGCGAGTCCTCAATTTGAAAGGCAACAAGATATCATCGCTCCAAGATATAAGCAAGTTGAAACC GCTTCAAGATTTGATTTCTCTGATCCTAGTTGAAAATCCAGTTGTGACCCTTCCTCATTACCTCCAGTTTACCATTTTCCACCTCCGTTC ATTGGAAAGTTTGGAAGGTCAGCCAGTAACCACTCAGGATAGACAGGAGGCTTTTGAGAGATTCAGTTTAGAAGAGGTAGAAAGACTGGA AAGAGACCTAGAAAAAAAGATGATAGAAACTGAAGAGCTTAAGAGCAAACAAACAAGGTTCCTTGAGGAAATTAAAAATCAAGATAAATT GAATAAATCATTAAAAGAGGAGGCCATGTTACAGAAACAGAGCTGTGAGGAACTCAAGAGTGACTTAAACACAAAAAATGAATTGCTAAA ACAGAAGACCATAGAATTAACACGAGCATGTCAGAAGCAATATGAGCTGGAACAGGAATTGGCCTTTTATAAAATTGATGCTAAATTTGA GCCACTAAATTATTATCCATCAGAGTATGCTGAAATTGATAAAGCCCCAGATGAAAGCCCTTACATTGGCAAATCCAGATACAAGAGAAA TATGTTTGCCACAGAGAGTTATATTATTGACAGTGCTCAGGCAGTACAGATCAAGAAGATGGAGCCAGATGAACAACTTAGAAATGATCA CATGAACTTGAGAGGCCACACACCACTGGACACGCAACTGGAAGACAAAGAAAAAAAAATAAGTGCAGCACAAACTCGACTATCAGAACT GCATGATGAAATAGAAAAGGCAGAACAACAAATTTTGAGAGCTACTGAAGAATTTAAACAACTGGAAGAAGCTATACAACTAAAAAAGAT TTCAGAAGCAGGGAAAGACCTTCTTTACAAGCAGTTGAGTGGTAGACTACAACTTGTAAATAAATTACGCCAGGAAGCTCTGGATCTAGA ACTGCAGATGGAAAAGCAAAAGCAGGAAATTGCCGGAAAGCAGAAGGAGATTAAGGACCTGCAAATAGCCATAGATAGCCTGGATTCCAA >In-frame_ENST00000412819_ENST00000373865_TCGA-BR-8683-01A_GSN_chr9_124065343_+_CNTRL_chr9_123852553_length(amino acids)=464AA_start in transcript=721_stop in transcript=2112 MALIKSLNLSLSKDGGKKFKYIENLEKCVKLEVLNLSYNLIGKIEKLDKLLKLRELNLSYNKISKIEGIENMCNLQKLNLAGNEIEHIPV WLGKKLKSLRVLNLKGNKISSLQDISKLKPLQDLISLILVENPVVTLPHYLQFTIFHLRSLESLEGQPVTTQDRQEAFERFSLEEVERLE RDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKEEAMLQKQSCEELKSDLNTKNELLKQKTIELTRACQKQYELEQELAFYKIDAKFE PLNYYPSEYAEIDKAPDESPYIGKSRYKRNMFATESYIIDSAQAVQIKKMEPDEQLRNDHMNLRGHTPLDTQLEDKEKKISAAQTRLSEL HDEIEKAEQQILRATEEFKQLEEAIQLKKISEAGKDLLYKQLSGRLQLVNKLRQEALDLELQMEKQKQEIAGKQKEIKDLQIAIDSLDSK -------------------------------------------------------------- >In-frame_ENST00000394353_ENST00000373865_TCGA-BR-8683-01A_GSN_chr9_124065343_+_CNTRL_chr9_123852553_length(transcript)=2097nt_BP=633nt TCCCGCCCGCGCCCTGCCCACCCCGGCCGCGCGCACCACAACGCCCCCGCCCCGCCGCCCGGAACCAGCTGAGCGCAGCTGGACCCAGCA GCCGCTGTCTCCAGTGCCGCAGCAGCAGGTAGTGCTCATAGCTCTCTTTGTCCAGTGCTTCGGCCTTGGTCCCAGCGCCTTCCCACGGAG CAGCACTCTTCACCCTGCACAGCCTTGTTAGATACAGCGCTAGGAAAAGGGGAGTAATTCAGGTCTAGAATGGAAAAACTGTTTTGTTGC TTTCCCAACAGCATGGTGGTGGAACACCCCGAGTTCCTCAAGGCAGGGAAGGAGCCTGGCCTGCAGATCTGGCGTGTGGAGAAGTTCGAT CTGGTGCCCGTGCCCACCAACCTTTATGGAGACTTCTTCACGGGCGACGCCTACGTCATCCTGAAGACAGTGCAGCTGAGGAACGGAAAT CTGCAGTATGACCTCCACTACTGGCTGGGCAATGAGTGCAGCCAGGATGAGAGCGGGGCGGCCGCCATCTTTACCGTGCAGCTGGATGAC TACCTGAACGGCCGGGCCGTGCAGCACCGTGAGGTCCAGGGCTTCGAGTCGGCCACCTTCCTAGGCTACTTCAAGTCTGGCCTGAAGTAC AAGGAGCTGATTCACATGCAGGAGTTAGATATATTACAGAGGCCCTCATTAAAAAACTTACTAAACAGGATAATTTGGCTTTGATAAAAT CTCTGAACCTTTCACTTTCTAAAGACGGTGGCAAGAAATTTAAGTATATTGAGAATTTGGAAAAATGTGTTAAACTTGAAGTACTGAATC TCAGCTATAATCTAATAGGGAAGATTGAAAAGTTGGACAAGCTGTTAAAATTACGTGAACTCAACTTATCATATAACAAAATCAGCAAAA TTGAAGGCATAGAAAATATGTGTAATCTGCAAAAGCTTAACCTTGCAGGAAATGAAATTGAGCATATTCCAGTATGGTTAGGGAAGAAGT TAAAATCTTTGCGAGTCCTCAATTTGAAAGGCAACAAGATATCATCGCTCCAAGATATAAGCAAGTTGAAACCGCTTCAAGATTTGATTT CTCTGATCCTAGTTGAAAATCCAGTTGTGACCCTTCCTCATTACCTCCAGTTTACCATTTTCCACCTCCGTTCATTGGAAAGTTTGGAAG GTCAGCCAGTAACCACTCAGGATAGACAGGAGGCTTTTGAGAGATTCAGTTTAGAAGAGGTAGAAAGACTGGAAAGAGACCTAGAAAAAA AGATGATAGAAACTGAAGAGCTTAAGAGCAAACAAACAAGGTTCCTTGAGGAAATTAAAAATCAAGATAAATTGAATAAATCATTAAAAG AGGAGGCCATGTTACAGAAACAGAGCTGTGAGGAACTCAAGAGTGACTTAAACACAAAAAATGAATTGCTAAAACAGAAGACCATAGAAT TAACACGAGCATGTCAGAAGCAATATGAGCTGGAACAGGAATTGGCCTTTTATAAAATTGATGCTAAATTTGAGCCACTAAATTATTATC CATCAGAGTATGCTGAAATTGATAAAGCCCCAGATGAAAGCCCTTACATTGGCAAATCCAGATACAAGAGAAATATGTTTGCCACAGAGA GTTATATTATTGACAGTGCTCAGGCAGTACAGATCAAGAAGATGGAGCCAGATGAACAACTTAGAAATGATCACATGAACTTGAGAGGCC ACACACCACTGGACACGCAACTGGAAGACAAAGAAAAAAAAATAAGTGCAGCACAAACTCGACTATCAGAACTGCATGATGAAATAGAAA AGGCAGAACAACAAATTTTGAGAGCTACTGAAGAATTTAAACAACTGGAAGAAGCTATACAACTAAAAAAGATTTCAGAAGCAGGGAAAG ACCTTCTTTACAAGCAGTTGAGTGGTAGACTACAACTTGTAAATAAATTACGCCAGGAAGCTCTGGATCTAGAACTGCAGATGGAAAAGC AAAAGCAGGAAATTGCCGGAAAGCAGAAGGAGATTAAGGACCTGCAAATAGCCATAGATAGCCTGGATTCCAAAGACCCAAAACATGTGA >In-frame_ENST00000394353_ENST00000373865_TCGA-BR-8683-01A_GSN_chr9_124065343_+_CNTRL_chr9_123852553_length(amino acids)=464AA_start in transcript=704_stop in transcript=2095 MALIKSLNLSLSKDGGKKFKYIENLEKCVKLEVLNLSYNLIGKIEKLDKLLKLRELNLSYNKISKIEGIENMCNLQKLNLAGNEIEHIPV WLGKKLKSLRVLNLKGNKISSLQDISKLKPLQDLISLILVENPVVTLPHYLQFTIFHLRSLESLEGQPVTTQDRQEAFERFSLEEVERLE RDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKEEAMLQKQSCEELKSDLNTKNELLKQKTIELTRACQKQYELEQELAFYKIDAKFE PLNYYPSEYAEIDKAPDESPYIGKSRYKRNMFATESYIIDSAQAVQIKKMEPDEQLRNDHMNLRGHTPLDTQLEDKEKKISAAQTRLSEL HDEIEKAEQQILRATEEFKQLEEAIQLKKISEAGKDLLYKQLSGRLQLVNKLRQEALDLELQMEKQKQEIAGKQKEIKDLQIAIDSLDSK -------------------------------------------------------------- >In-frame_ENST00000341272_ENST00000373865_TCGA-BR-8683-01A_GSN_chr9_124065343_+_CNTRL_chr9_123852553_length(transcript)=2035nt_BP=571nt TCCCGCCCGCGCCCTGCCCACCCCGGCCGCGCGCACCACAACGCCCCCGCCCCGCCGCCCGGAACCAGCTGAGCGCAGCTGGACCCAGCA GCCGCTGTCTCCAGTGCCGCAGCAGCAGGTAGTGCTCATAGCTCTCTTTGTCCAGTGCTTCGGCCTTGGTCCCAGCGCCTTCCCACGGAG CAGCACTCTTCACCCTGCACAGCCTTGTTAGCCCAACAGCATGGTGGTGGAACACCCCGAGTTCCTCAAGGCAGGGAAGGAGCCTGGCCT GCAGATCTGGCGTGTGGAGAAGTTCGATCTGGTGCCCGTGCCCACCAACCTTTATGGAGACTTCTTCACGGGCGACGCCTACGTCATCCT GAAGACAGTGCAGCTGAGGAACGGAAATCTGCAGTATGACCTCCACTACTGGCTGGGCAATGAGTGCAGCCAGGATGAGAGCGGGGCGGC CGCCATCTTTACCGTGCAGCTGGATGACTACCTGAACGGCCGGGCCGTGCAGCACCGTGAGGTCCAGGGCTTCGAGTCGGCCACCTTCCT AGGCTACTTCAAGTCTGGCCTGAAGTACAAGGAGCTGATTCACATGCAGGAGTTAGATATATTACAGAGGCCCTCATTAAAAAACTTACT AAACAGGATAATTTGGCTTTGATAAAATCTCTGAACCTTTCACTTTCTAAAGACGGTGGCAAGAAATTTAAGTATATTGAGAATTTGGAA AAATGTGTTAAACTTGAAGTACTGAATCTCAGCTATAATCTAATAGGGAAGATTGAAAAGTTGGACAAGCTGTTAAAATTACGTGAACTC AACTTATCATATAACAAAATCAGCAAAATTGAAGGCATAGAAAATATGTGTAATCTGCAAAAGCTTAACCTTGCAGGAAATGAAATTGAG CATATTCCAGTATGGTTAGGGAAGAAGTTAAAATCTTTGCGAGTCCTCAATTTGAAAGGCAACAAGATATCATCGCTCCAAGATATAAGC AAGTTGAAACCGCTTCAAGATTTGATTTCTCTGATCCTAGTTGAAAATCCAGTTGTGACCCTTCCTCATTACCTCCAGTTTACCATTTTC CACCTCCGTTCATTGGAAAGTTTGGAAGGTCAGCCAGTAACCACTCAGGATAGACAGGAGGCTTTTGAGAGATTCAGTTTAGAAGAGGTA GAAAGACTGGAAAGAGACCTAGAAAAAAAGATGATAGAAACTGAAGAGCTTAAGAGCAAACAAACAAGGTTCCTTGAGGAAATTAAAAAT CAAGATAAATTGAATAAATCATTAAAAGAGGAGGCCATGTTACAGAAACAGAGCTGTGAGGAACTCAAGAGTGACTTAAACACAAAAAAT GAATTGCTAAAACAGAAGACCATAGAATTAACACGAGCATGTCAGAAGCAATATGAGCTGGAACAGGAATTGGCCTTTTATAAAATTGAT GCTAAATTTGAGCCACTAAATTATTATCCATCAGAGTATGCTGAAATTGATAAAGCCCCAGATGAAAGCCCTTACATTGGCAAATCCAGA TACAAGAGAAATATGTTTGCCACAGAGAGTTATATTATTGACAGTGCTCAGGCAGTACAGATCAAGAAGATGGAGCCAGATGAACAACTT AGAAATGATCACATGAACTTGAGAGGCCACACACCACTGGACACGCAACTGGAAGACAAAGAAAAAAAAATAAGTGCAGCACAAACTCGA CTATCAGAACTGCATGATGAAATAGAAAAGGCAGAACAACAAATTTTGAGAGCTACTGAAGAATTTAAACAACTGGAAGAAGCTATACAA CTAAAAAAGATTTCAGAAGCAGGGAAAGACCTTCTTTACAAGCAGTTGAGTGGTAGACTACAACTTGTAAATAAATTACGCCAGGAAGCT CTGGATCTAGAACTGCAGATGGAAAAGCAAAAGCAGGAAATTGCCGGAAAGCAGAAGGAGATTAAGGACCTGCAAATAGCCATAGATAGC >In-frame_ENST00000341272_ENST00000373865_TCGA-BR-8683-01A_GSN_chr9_124065343_+_CNTRL_chr9_123852553_length(amino acids)=464AA_start in transcript=642_stop in transcript=2033 MALIKSLNLSLSKDGGKKFKYIENLEKCVKLEVLNLSYNLIGKIEKLDKLLKLRELNLSYNKISKIEGIENMCNLQKLNLAGNEIEHIPV WLGKKLKSLRVLNLKGNKISSLQDISKLKPLQDLISLILVENPVVTLPHYLQFTIFHLRSLESLEGQPVTTQDRQEAFERFSLEEVERLE RDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKEEAMLQKQSCEELKSDLNTKNELLKQKTIELTRACQKQYELEQELAFYKIDAKFE PLNYYPSEYAEIDKAPDESPYIGKSRYKRNMFATESYIIDSAQAVQIKKMEPDEQLRNDHMNLRGHTPLDTQLEDKEKKISAAQTRLSEL HDEIEKAEQQILRATEEFKQLEEAIQLKKISEAGKDLLYKQLSGRLQLVNKLRQEALDLELQMEKQKQEIAGKQKEIKDLQIAIDSLDSK -------------------------------------------------------------- >In-frame_ENST00000545652_ENST00000373865_TCGA-BR-8683-01A_GSN_chr9_124065343_+_CNTRL_chr9_123852553_length(transcript)=1994nt_BP=530nt GTGCTCCCAGGGCCCACAACTGCTTGAATGACTATTGGTGTTCCTGTTTGTGTGCCCTCTGGGCCGGGAAGTCAGAGAAAGAAAGGAGAC AATTTGTGATTGAACAGCCACTGTGGCCATCATTCTCCTTACCTGTCTGATGAGAGCTGATCTTCATGCCACTGTGTACACCCAACAGCA TGGTGGTGGAACACCCCGAGTTCCTCAAGGCAGGGAAGGAGCCTGGCCTGCAGATCTGGCGTGTGGAGAAGTTCGATCTGGTGCCCGTGC CCACCAACCTTTATGGAGACTTCTTCACGGGCGACGCCTACGTCATCCTGAAGACAGTGCAGCTGAGGAACGGAAATCTGCAGTATGACC TCCACTACTGGCTGGGCAATGAGTGCAGCCAGGATGAGAGCGGGGCGGCCGCCATCTTTACCGTGCAGCTGGATGACTACCTGAACGGCC GGGCCGTGCAGCACCGTGAGGTCCAGGGCTTCGAGTCGGCCACCTTCCTAGGCTACTTCAAGTCTGGCCTGAAGTACAAGGAGCTGATTC ACATGCAGGAGTTAGATATATTACAGAGGCCCTCATTAAAAAACTTACTAAACAGGATAATTTGGCTTTGATAAAATCTCTGAACCTTTC ACTTTCTAAAGACGGTGGCAAGAAATTTAAGTATATTGAGAATTTGGAAAAATGTGTTAAACTTGAAGTACTGAATCTCAGCTATAATCT AATAGGGAAGATTGAAAAGTTGGACAAGCTGTTAAAATTACGTGAACTCAACTTATCATATAACAAAATCAGCAAAATTGAAGGCATAGA AAATATGTGTAATCTGCAAAAGCTTAACCTTGCAGGAAATGAAATTGAGCATATTCCAGTATGGTTAGGGAAGAAGTTAAAATCTTTGCG AGTCCTCAATTTGAAAGGCAACAAGATATCATCGCTCCAAGATATAAGCAAGTTGAAACCGCTTCAAGATTTGATTTCTCTGATCCTAGT TGAAAATCCAGTTGTGACCCTTCCTCATTACCTCCAGTTTACCATTTTCCACCTCCGTTCATTGGAAAGTTTGGAAGGTCAGCCAGTAAC CACTCAGGATAGACAGGAGGCTTTTGAGAGATTCAGTTTAGAAGAGGTAGAAAGACTGGAAAGAGACCTAGAAAAAAAGATGATAGAAAC TGAAGAGCTTAAGAGCAAACAAACAAGGTTCCTTGAGGAAATTAAAAATCAAGATAAATTGAATAAATCATTAAAAGAGGAGGCCATGTT ACAGAAACAGAGCTGTGAGGAACTCAAGAGTGACTTAAACACAAAAAATGAATTGCTAAAACAGAAGACCATAGAATTAACACGAGCATG TCAGAAGCAATATGAGCTGGAACAGGAATTGGCCTTTTATAAAATTGATGCTAAATTTGAGCCACTAAATTATTATCCATCAGAGTATGC TGAAATTGATAAAGCCCCAGATGAAAGCCCTTACATTGGCAAATCCAGATACAAGAGAAATATGTTTGCCACAGAGAGTTATATTATTGA CAGTGCTCAGGCAGTACAGATCAAGAAGATGGAGCCAGATGAACAACTTAGAAATGATCACATGAACTTGAGAGGCCACACACCACTGGA CACGCAACTGGAAGACAAAGAAAAAAAAATAAGTGCAGCACAAACTCGACTATCAGAACTGCATGATGAAATAGAAAAGGCAGAACAACA AATTTTGAGAGCTACTGAAGAATTTAAACAACTGGAAGAAGCTATACAACTAAAAAAGATTTCAGAAGCAGGGAAAGACCTTCTTTACAA GCAGTTGAGTGGTAGACTACAACTTGTAAATAAATTACGCCAGGAAGCTCTGGATCTAGAACTGCAGATGGAAAAGCAAAAGCAGGAAAT TGCCGGAAAGCAGAAGGAGATTAAGGACCTGCAAATAGCCATAGATAGCCTGGATTCCAAAGACCCAAAACATGTGAGTAAATTAAGAAA >In-frame_ENST00000545652_ENST00000373865_TCGA-BR-8683-01A_GSN_chr9_124065343_+_CNTRL_chr9_123852553_length(amino acids)=464AA_start in transcript=601_stop in transcript=1992 MALIKSLNLSLSKDGGKKFKYIENLEKCVKLEVLNLSYNLIGKIEKLDKLLKLRELNLSYNKISKIEGIENMCNLQKLNLAGNEIEHIPV WLGKKLKSLRVLNLKGNKISSLQDISKLKPLQDLISLILVENPVVTLPHYLQFTIFHLRSLESLEGQPVTTQDRQEAFERFSLEEVERLE RDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKEEAMLQKQSCEELKSDLNTKNELLKQKTIELTRACQKQYELEQELAFYKIDAKFE PLNYYPSEYAEIDKAPDESPYIGKSRYKRNMFATESYIIDSAQAVQIKKMEPDEQLRNDHMNLRGHTPLDTQLEDKEKKISAAQTRLSEL HDEIEKAEQQILRATEEFKQLEEAIQLKKISEAGKDLLYKQLSGRLQLVNKLRQEALDLELQMEKQKQEIAGKQKEIKDLQIAIDSLDSK -------------------------------------------------------------- >In-frame_ENST00000373818_ENST00000373865_TCGA-BR-8683-01A_GSN_chr9_124065343_+_CNTRL_chr9_123852553_length(transcript)=2037nt_BP=573nt GGGCGGCTACTTAAGGTCGGCGACCCGAGGCCGCGGCTGCCGACTGGGTCCCCTGCCGCTGTCGCCACCATGGCTCCGCACCGCCCCGCG CCCGCGCTGCTTTGCGCGCTGTCCCTGGCGCTGTGCGCGCTGTCGCTGCCCGTCCGCGCGGCCACTGCGTCGCGGGGGGCGTCCCAGGCG GGGGCGCCCCAGGGGCGGGTGCCCGAGGCGCGGCCCAACAGCATGGTGGTGGAACACCCCGAGTTCCTCAAGGCAGGGAAGGAGCCTGGC CTGCAGATCTGGCGTGTGGAGAAGTTCGATCTGGTGCCCGTGCCCACCAACCTTTATGGAGACTTCTTCACGGGCGACGCCTACGTCATC CTGAAGACAGTGCAGCTGAGGAACGGAAATCTGCAGTATGACCTCCACTACTGGCTGGGCAATGAGTGCAGCCAGGATGAGAGCGGGGCG GCCGCCATCTTTACCGTGCAGCTGGATGACTACCTGAACGGCCGGGCCGTGCAGCACCGTGAGGTCCAGGGCTTCGAGTCGGCCACCTTC CTAGGCTACTTCAAGTCTGGCCTGAAGTACAAGGAGCTGATTCACATGCAGGAGTTAGATATATTACAGAGGCCCTCATTAAAAAACTTA CTAAACAGGATAATTTGGCTTTGATAAAATCTCTGAACCTTTCACTTTCTAAAGACGGTGGCAAGAAATTTAAGTATATTGAGAATTTGG AAAAATGTGTTAAACTTGAAGTACTGAATCTCAGCTATAATCTAATAGGGAAGATTGAAAAGTTGGACAAGCTGTTAAAATTACGTGAAC TCAACTTATCATATAACAAAATCAGCAAAATTGAAGGCATAGAAAATATGTGTAATCTGCAAAAGCTTAACCTTGCAGGAAATGAAATTG AGCATATTCCAGTATGGTTAGGGAAGAAGTTAAAATCTTTGCGAGTCCTCAATTTGAAAGGCAACAAGATATCATCGCTCCAAGATATAA GCAAGTTGAAACCGCTTCAAGATTTGATTTCTCTGATCCTAGTTGAAAATCCAGTTGTGACCCTTCCTCATTACCTCCAGTTTACCATTT TCCACCTCCGTTCATTGGAAAGTTTGGAAGGTCAGCCAGTAACCACTCAGGATAGACAGGAGGCTTTTGAGAGATTCAGTTTAGAAGAGG TAGAAAGACTGGAAAGAGACCTAGAAAAAAAGATGATAGAAACTGAAGAGCTTAAGAGCAAACAAACAAGGTTCCTTGAGGAAATTAAAA ATCAAGATAAATTGAATAAATCATTAAAAGAGGAGGCCATGTTACAGAAACAGAGCTGTGAGGAACTCAAGAGTGACTTAAACACAAAAA ATGAATTGCTAAAACAGAAGACCATAGAATTAACACGAGCATGTCAGAAGCAATATGAGCTGGAACAGGAATTGGCCTTTTATAAAATTG ATGCTAAATTTGAGCCACTAAATTATTATCCATCAGAGTATGCTGAAATTGATAAAGCCCCAGATGAAAGCCCTTACATTGGCAAATCCA GATACAAGAGAAATATGTTTGCCACAGAGAGTTATATTATTGACAGTGCTCAGGCAGTACAGATCAAGAAGATGGAGCCAGATGAACAAC TTAGAAATGATCACATGAACTTGAGAGGCCACACACCACTGGACACGCAACTGGAAGACAAAGAAAAAAAAATAAGTGCAGCACAAACTC GACTATCAGAACTGCATGATGAAATAGAAAAGGCAGAACAACAAATTTTGAGAGCTACTGAAGAATTTAAACAACTGGAAGAAGCTATAC AACTAAAAAAGATTTCAGAAGCAGGGAAAGACCTTCTTTACAAGCAGTTGAGTGGTAGACTACAACTTGTAAATAAATTACGCCAGGAAG CTCTGGATCTAGAACTGCAGATGGAAAAGCAAAAGCAGGAAATTGCCGGAAAGCAGAAGGAGATTAAGGACCTGCAAATAGCCATAGATA >In-frame_ENST00000373818_ENST00000373865_TCGA-BR-8683-01A_GSN_chr9_124065343_+_CNTRL_chr9_123852553_length(amino acids)=464AA_start in transcript=644_stop in transcript=2035 MALIKSLNLSLSKDGGKKFKYIENLEKCVKLEVLNLSYNLIGKIEKLDKLLKLRELNLSYNKISKIEGIENMCNLQKLNLAGNEIEHIPV WLGKKLKSLRVLNLKGNKISSLQDISKLKPLQDLISLILVENPVVTLPHYLQFTIFHLRSLESLEGQPVTTQDRQEAFERFSLEEVERLE RDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKEEAMLQKQSCEELKSDLNTKNELLKQKTIELTRACQKQYELEQELAFYKIDAKFE PLNYYPSEYAEIDKAPDESPYIGKSRYKRNMFATESYIIDSAQAVQIKKMEPDEQLRNDHMNLRGHTPLDTQLEDKEKKISAAQTRLSEL HDEIEKAEQQILRATEEFKQLEEAIQLKKISEAGKDLLYKQLSGRLQLVNKLRQEALDLELQMEKQKQEIAGKQKEIKDLQIAIDSLDSK -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for GSN-CNTRL |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for GSN-CNTRL |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for GSN-CNTRL |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | GSN | C1622345 | Meretoja syndrome | 6 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
Hgene | GSN | C0936273 | Familial Amyloid Polyneuropathy, Type IV | 3 | ORPHANET |
Hgene | GSN | C0001787 | Osteoporosis, Age-Related | 1 | CTD_human |
Hgene | GSN | C0002726 | Amyloidosis | 1 | GENOMICS_ENGLAND |
Hgene | GSN | C0018800 | Cardiomegaly | 1 | CTD_human |
Hgene | GSN | C0019193 | Hepatitis, Toxic | 1 | CTD_human |
Hgene | GSN | C0023893 | Liver Cirrhosis, Experimental | 1 | CTD_human |
Hgene | GSN | C0025500 | Mesothelioma | 1 | CTD_human |
Hgene | GSN | C0029456 | Osteoporosis | 1 | CTD_human |
Hgene | GSN | C0029459 | Osteoporosis, Senile | 1 | CTD_human |
Hgene | GSN | C0030524 | Paratuberculosis | 1 | CTD_human |
Hgene | GSN | C0036341 | Schizophrenia | 1 | PSYGENET |
Hgene | GSN | C0043094 | Weight Gain | 1 | CTD_human |
Hgene | GSN | C0268389 | Amyloidosis, familial visceral | 1 | GENOMICS_ENGLAND |
Hgene | GSN | C0751406 | Post-Traumatic Osteoporosis | 1 | CTD_human |
Hgene | GSN | C0860207 | Drug-Induced Liver Disease | 1 | CTD_human |
Hgene | GSN | C0948089 | Acute Coronary Syndrome | 1 | CTD_human |
Hgene | GSN | C1262760 | Hepatitis, Drug-Induced | 1 | CTD_human |
Hgene | GSN | C1383860 | Cardiac Hypertrophy | 1 | CTD_human |
Hgene | GSN | C3658290 | Drug-Induced Acute Liver Injury | 1 | CTD_human |
Hgene | GSN | C4277682 | Chemical and Drug Induced Liver Injury | 1 | CTD_human |
Hgene | GSN | C4279912 | Chemically-Induced Liver Toxicity | 1 | CTD_human |