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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:GTF2H2-OCLN (FusionGDB2 ID:35078) |
Fusion Gene Summary for GTF2H2-OCLN |
Fusion gene summary |
Fusion gene information | Fusion gene name: GTF2H2-OCLN | Fusion gene ID: 35078 | Hgene | Tgene | Gene symbol | GTF2H2 | OCLN | Gene ID | 2966 | 100506658 |
Gene name | general transcription factor IIH subunit 2 | occludin | |
Synonyms | BTF2|BTF2P44|T-BTF2P44|TFIIH|p44 | BLCPMG|PPP1R115|PTORCH1 | |
Cytomap | 5q13.2 | 5q13.2 | |
Type of gene | protein-coding | protein-coding | |
Description | general transcription factor IIH subunit 2BTF2 p44TFIIH basal transcription factor complex p44 subunitbasic transcription factor 2 44 kDa subunitgeneral transcription factor IIH polypeptide 2general transcription factor IIH, polypeptide 2, 44kD subun | occludinphosphatase 1, regulatory subunit 115tight junction protein occludin | |
Modification date | 20200327 | 20200313 | |
UniProtAcc | Q13888 | . | |
Ensembl transtripts involved in fusion gene | ENST00000274400, ENST00000425596, ENST00000330280, ENST00000517900, ENST00000518275, | ENST00000355237, ENST00000396442, ENST00000380766, ENST00000538151, ENST00000542132, ENST00000514370, | |
Fusion gene scores | * DoF score | 2 X 2 X 2=8 | 5 X 5 X 4=100 |
# samples | 2 | 6 | |
** MAII score | log2(2/8*10)=1.32192809488736 | log2(6/100*10)=-0.736965594166206 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: GTF2H2 [Title/Abstract] AND OCLN [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | GTF2H2(70337349)-OCLN(68840731), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | GTF2H2-OCLN seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | GTF2H2 | GO:0006366 | transcription by RNA polymerase II | 9852112|27193682 |
Hgene | GTF2H2 | GO:1905776 | positive regulation of DNA helicase activity | 11445587 |
Fusion gene breakpoints across GTF2H2 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across OCLN (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | ESCA | TCGA-VR-A8EU | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
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Fusion Gene ORF analysis for GTF2H2-OCLN |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000274400 | ENST00000355237 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
Frame-shift | ENST00000274400 | ENST00000396442 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
Frame-shift | ENST00000274400 | ENST00000380766 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
Frame-shift | ENST00000274400 | ENST00000538151 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
Frame-shift | ENST00000274400 | ENST00000542132 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
5CDS-3UTR | ENST00000274400 | ENST00000514370 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
In-frame | ENST00000425596 | ENST00000355237 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
In-frame | ENST00000425596 | ENST00000396442 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
In-frame | ENST00000425596 | ENST00000380766 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
In-frame | ENST00000425596 | ENST00000538151 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
In-frame | ENST00000425596 | ENST00000542132 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
5CDS-3UTR | ENST00000425596 | ENST00000514370 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
In-frame | ENST00000330280 | ENST00000355237 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
In-frame | ENST00000330280 | ENST00000396442 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
In-frame | ENST00000330280 | ENST00000380766 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
In-frame | ENST00000330280 | ENST00000538151 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
In-frame | ENST00000330280 | ENST00000542132 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
5CDS-3UTR | ENST00000330280 | ENST00000514370 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
intron-3CDS | ENST00000517900 | ENST00000355237 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
intron-3CDS | ENST00000517900 | ENST00000396442 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
intron-3CDS | ENST00000517900 | ENST00000380766 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
intron-3CDS | ENST00000517900 | ENST00000538151 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
intron-3CDS | ENST00000517900 | ENST00000542132 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
intron-3UTR | ENST00000517900 | ENST00000514370 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
intron-3CDS | ENST00000518275 | ENST00000355237 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
intron-3CDS | ENST00000518275 | ENST00000396442 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
intron-3CDS | ENST00000518275 | ENST00000380766 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
intron-3CDS | ENST00000518275 | ENST00000538151 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
intron-3CDS | ENST00000518275 | ENST00000542132 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
intron-3UTR | ENST00000518275 | ENST00000514370 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000425596 | GTF2H2 | chr5 | 70337349 | - | ENST00000355237 | OCLN | chr5 | 68840731 | + | 6099 | 1134 | 277 | 1665 | 462 |
ENST00000425596 | GTF2H2 | chr5 | 70337349 | - | ENST00000396442 | OCLN | chr5 | 68840731 | + | 1666 | 1134 | 277 | 1665 | 463 |
ENST00000425596 | GTF2H2 | chr5 | 70337349 | - | ENST00000380766 | OCLN | chr5 | 68840731 | + | 2299 | 1134 | 277 | 1665 | 462 |
ENST00000425596 | GTF2H2 | chr5 | 70337349 | - | ENST00000538151 | OCLN | chr5 | 68840731 | + | 1707 | 1134 | 277 | 1665 | 462 |
ENST00000425596 | GTF2H2 | chr5 | 70337349 | - | ENST00000542132 | OCLN | chr5 | 68840731 | + | 1707 | 1134 | 277 | 1665 | 462 |
ENST00000330280 | GTF2H2 | chr5 | 70337349 | - | ENST00000355237 | OCLN | chr5 | 68840731 | + | 6281 | 1316 | 279 | 1847 | 522 |
ENST00000330280 | GTF2H2 | chr5 | 70337349 | - | ENST00000396442 | OCLN | chr5 | 68840731 | + | 1848 | 1316 | 279 | 1847 | 522 |
ENST00000330280 | GTF2H2 | chr5 | 70337349 | - | ENST00000380766 | OCLN | chr5 | 68840731 | + | 2481 | 1316 | 279 | 1847 | 522 |
ENST00000330280 | GTF2H2 | chr5 | 70337349 | - | ENST00000538151 | OCLN | chr5 | 68840731 | + | 1889 | 1316 | 279 | 1847 | 522 |
ENST00000330280 | GTF2H2 | chr5 | 70337349 | - | ENST00000542132 | OCLN | chr5 | 68840731 | + | 1889 | 1316 | 279 | 1847 | 522 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000425596 | ENST00000355237 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + | 8.09E-05 | 0.9999192 |
ENST00000425596 | ENST00000396442 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + | 0.000804233 | 0.99919575 |
ENST00000425596 | ENST00000380766 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + | 0.000316656 | 0.9996834 |
ENST00000425596 | ENST00000538151 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + | 0.000901366 | 0.99909866 |
ENST00000425596 | ENST00000542132 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + | 0.000901366 | 0.99909866 |
ENST00000330280 | ENST00000355237 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + | 0.000218795 | 0.9997812 |
ENST00000330280 | ENST00000396442 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + | 0.002522897 | 0.9974771 |
ENST00000330280 | ENST00000380766 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + | 0.000900863 | 0.99909914 |
ENST00000330280 | ENST00000538151 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + | 0.002875439 | 0.9971246 |
ENST00000330280 | ENST00000542132 | GTF2H2 | chr5 | 70337349 | - | OCLN | chr5 | 68840731 | + | 0.002875439 | 0.9971246 |
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Fusion Genomic Features for GTF2H2-OCLN |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
GTF2H2 | chr5 | 70337348 | - | OCLN | chr5 | 68840730 | + | 0.42213452 | 0.5778654 |
GTF2H2 | chr5 | 70337348 | - | OCLN | chr5 | 68840730 | + | 0.42213452 | 0.5778654 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for GTF2H2-OCLN |
Go to FGviewer for the breakpoints of chr5:70337349-chr5:68840731 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
GTF2H2 | . |
FUNCTION: Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to CAK, in RNA transcription by RNA polymerase II. In NER, TFIIH acts by opening DNA around the lesion to allow the excision of the damaged oligonucleotide and its replacement by a new DNA fragment. In transcription, TFIIH has an essential role in transcription initiation. When the pre-initiation complex (PIC) has been established, TFIIH is required for promoter opening and promoter escape. Phosphorylation of the C-terminal tail (CTD) of the largest subunit of RNA polymerase II by the kinase module CAK controls the initiation of transcription. The N-terminus of GTF2H2 interacts with and regulates XPD whereas an intact C-terminus is required for a successful escape of RNAP II form the promoter. {ECO:0000269|PubMed:11319235, ECO:0000269|PubMed:27193682, ECO:0000269|PubMed:8194529, ECO:0000269|PubMed:9852112}. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | GTF2H2 | chr5:70337349 | chr5:68840731 | ENST00000274400 | - | 14 | 16 | 60_236 | 342.6666666666667 | 396.0 | Domain | VWFA |
Hgene | GTF2H2 | chr5:70337349 | chr5:68840731 | ENST00000330280 | - | 15 | 17 | 60_236 | 342.6666666666667 | 396.0 | Domain | VWFA |
Hgene | GTF2H2 | chr5:70337349 | chr5:68840731 | ENST00000274400 | - | 14 | 16 | 291_308 | 342.6666666666667 | 396.0 | Zinc finger | Note=C4-type |
Hgene | GTF2H2 | chr5:70337349 | chr5:68840731 | ENST00000330280 | - | 15 | 17 | 291_308 | 342.6666666666667 | 396.0 | Zinc finger | Note=C4-type |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000355237 | 4 | 9 | 426_489 | 345.6666666666667 | 523.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000380766 | 3 | 8 | 426_489 | 291.6666666666667 | 469.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000396442 | 4 | 9 | 426_489 | 345.6666666666667 | 523.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000538151 | 2 | 7 | 426_489 | 94.66666666666667 | 272.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000542132 | 1 | 6 | 426_489 | 23.666666666666668 | 201.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000538151 | 2 | 7 | 92_131 | 94.66666666666667 | 272.0 | Compositional bias | Note=Gly/Tyr-rich | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000542132 | 1 | 6 | 92_131 | 23.666666666666668 | 201.0 | Compositional bias | Note=Gly/Tyr-rich | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000542132 | 1 | 6 | 60_269 | 23.666666666666668 | 201.0 | Domain | MARVEL | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000538151 | 2 | 7 | 161_170 | 94.66666666666667 | 272.0 | Topological domain | Cytoplasmic | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000538151 | 2 | 7 | 196_243 | 94.66666666666667 | 272.0 | Topological domain | Extracellular | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000538151 | 2 | 7 | 266_522 | 94.66666666666667 | 272.0 | Topological domain | Cytoplasmic | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000542132 | 1 | 6 | 161_170 | 23.666666666666668 | 201.0 | Topological domain | Cytoplasmic | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000542132 | 1 | 6 | 196_243 | 23.666666666666668 | 201.0 | Topological domain | Extracellular | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000542132 | 1 | 6 | 266_522 | 23.666666666666668 | 201.0 | Topological domain | Cytoplasmic | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000542132 | 1 | 6 | 90_135 | 23.666666666666668 | 201.0 | Topological domain | Extracellular | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000538151 | 2 | 7 | 136_160 | 94.66666666666667 | 272.0 | Transmembrane | Helical | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000538151 | 2 | 7 | 171_195 | 94.66666666666667 | 272.0 | Transmembrane | Helical | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000538151 | 2 | 7 | 244_265 | 94.66666666666667 | 272.0 | Transmembrane | Helical | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000542132 | 1 | 6 | 136_160 | 23.666666666666668 | 201.0 | Transmembrane | Helical | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000542132 | 1 | 6 | 171_195 | 23.666666666666668 | 201.0 | Transmembrane | Helical | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000542132 | 1 | 6 | 244_265 | 23.666666666666668 | 201.0 | Transmembrane | Helical | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000542132 | 1 | 6 | 67_89 | 23.666666666666668 | 201.0 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000355237 | 4 | 9 | 92_131 | 345.6666666666667 | 523.0 | Compositional bias | Note=Gly/Tyr-rich | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000380766 | 3 | 8 | 92_131 | 291.6666666666667 | 469.0 | Compositional bias | Note=Gly/Tyr-rich | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000396442 | 4 | 9 | 92_131 | 345.6666666666667 | 523.0 | Compositional bias | Note=Gly/Tyr-rich | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000355237 | 4 | 9 | 60_269 | 345.6666666666667 | 523.0 | Domain | MARVEL | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000380766 | 3 | 8 | 60_269 | 291.6666666666667 | 469.0 | Domain | MARVEL | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000396442 | 4 | 9 | 60_269 | 345.6666666666667 | 523.0 | Domain | MARVEL | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000538151 | 2 | 7 | 60_269 | 94.66666666666667 | 272.0 | Domain | MARVEL | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000355237 | 4 | 9 | 161_170 | 345.6666666666667 | 523.0 | Topological domain | Cytoplasmic | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000355237 | 4 | 9 | 196_243 | 345.6666666666667 | 523.0 | Topological domain | Extracellular | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000355237 | 4 | 9 | 1_66 | 345.6666666666667 | 523.0 | Topological domain | Cytoplasmic | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000355237 | 4 | 9 | 266_522 | 345.6666666666667 | 523.0 | Topological domain | Cytoplasmic | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000355237 | 4 | 9 | 90_135 | 345.6666666666667 | 523.0 | Topological domain | Extracellular | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000380766 | 3 | 8 | 161_170 | 291.6666666666667 | 469.0 | Topological domain | Cytoplasmic | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000380766 | 3 | 8 | 196_243 | 291.6666666666667 | 469.0 | Topological domain | Extracellular | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000380766 | 3 | 8 | 1_66 | 291.6666666666667 | 469.0 | Topological domain | Cytoplasmic | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000380766 | 3 | 8 | 266_522 | 291.6666666666667 | 469.0 | Topological domain | Cytoplasmic | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000380766 | 3 | 8 | 90_135 | 291.6666666666667 | 469.0 | Topological domain | Extracellular | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000396442 | 4 | 9 | 161_170 | 345.6666666666667 | 523.0 | Topological domain | Cytoplasmic | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000396442 | 4 | 9 | 196_243 | 345.6666666666667 | 523.0 | Topological domain | Extracellular | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000396442 | 4 | 9 | 1_66 | 345.6666666666667 | 523.0 | Topological domain | Cytoplasmic | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000396442 | 4 | 9 | 266_522 | 345.6666666666667 | 523.0 | Topological domain | Cytoplasmic | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000396442 | 4 | 9 | 90_135 | 345.6666666666667 | 523.0 | Topological domain | Extracellular | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000538151 | 2 | 7 | 1_66 | 94.66666666666667 | 272.0 | Topological domain | Cytoplasmic | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000538151 | 2 | 7 | 90_135 | 94.66666666666667 | 272.0 | Topological domain | Extracellular | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000542132 | 1 | 6 | 1_66 | 23.666666666666668 | 201.0 | Topological domain | Cytoplasmic | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000355237 | 4 | 9 | 136_160 | 345.6666666666667 | 523.0 | Transmembrane | Helical | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000355237 | 4 | 9 | 171_195 | 345.6666666666667 | 523.0 | Transmembrane | Helical | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000355237 | 4 | 9 | 244_265 | 345.6666666666667 | 523.0 | Transmembrane | Helical | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000355237 | 4 | 9 | 67_89 | 345.6666666666667 | 523.0 | Transmembrane | Helical | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000380766 | 3 | 8 | 136_160 | 291.6666666666667 | 469.0 | Transmembrane | Helical | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000380766 | 3 | 8 | 171_195 | 291.6666666666667 | 469.0 | Transmembrane | Helical | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000380766 | 3 | 8 | 244_265 | 291.6666666666667 | 469.0 | Transmembrane | Helical | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000380766 | 3 | 8 | 67_89 | 291.6666666666667 | 469.0 | Transmembrane | Helical | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000396442 | 4 | 9 | 136_160 | 345.6666666666667 | 523.0 | Transmembrane | Helical | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000396442 | 4 | 9 | 171_195 | 345.6666666666667 | 523.0 | Transmembrane | Helical | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000396442 | 4 | 9 | 244_265 | 345.6666666666667 | 523.0 | Transmembrane | Helical | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000396442 | 4 | 9 | 67_89 | 345.6666666666667 | 523.0 | Transmembrane | Helical | |
Tgene | OCLN | chr5:70337349 | chr5:68840731 | ENST00000538151 | 2 | 7 | 67_89 | 94.66666666666667 | 272.0 | Transmembrane | Helical |
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Fusion Gene Sequence for GTF2H2-OCLN |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000425596_ENST00000355237_TCGA-VR-A8EU_GTF2H2_chr5_70337349_-_OCLN_chr5_68840731_length(transcript)=6099nt_BP=1134nt GGCTAGCTAGGCGGCTGGGAGCGTTTTCGTGGCGGGGAACGGAGGTTGAATTGCCCTGCCTGGGCTCATAGGGAAGGAGGATGTGAAGGA GCTTGTGAAGGCAGAGGAAGATTATTGAATAATAAAATACAGTTTTGAAAAAAATGGATGAAGAACCTGAAAGAACTAAGCGATGGGAAG GAGGCTATGAAAGAACATGGGAGATTCTTAAAGAAGATGAATCTGGATCACTTAAAGCTACAATAGAAGACATTCTATTCAAGGCAAAGA GAAAAAGATGCGCCACCTTTATGTGGTAGTAGATGGATCAAGAACAATGGAAGACCAAGATTTAAAGCCTAATAGACTGACGTGTACTTT AAAGTTGTTGGAATACTTTGTAGAGGAATATTTTGATCAAAATCCTATTAGTCAGATTGGAATAATTGTAACTAAGAGTAAAAGAGCTGA AAAATTGACTGAACTTTCAGGAAACCCAAGAAAACATATAACGTCTTTGAAGAAAGCTGTGGATATGACCTGCCATGGAGAGCCATCTCT TTATAATTCCCTAAGCATAGCTATGCAGACTCTAAAACACATGCCTGGACATACAAGTCGAGAAGTACTAATCATCTTTAGCAGCCTTAC AACTTGCGATCCATCTAATATTTATGATCTAATCAAGACCCTAAAGGCAGCTAAAATTAGAGTATCTGTTATTGGATTGTCTGCAGAAGT TCGCGTTTGCACTGTACTTGCTCGTGAAACTGGTGGCACGTACCATGTTATTTTAGATGAAAGCCATTACAAAGAGTTGCTCACACATCA TGTTAGTCCTCCTCCTGCTAGCTCAAGTTCTGAATGCTCACTTATTCGTATGGGATTTCCTCAGCACACCATTGCTTCTTTATCTGACCA GGATGCAAAACCCTCTTTCAGCATGGCGCATTTGGATGGCAATACTGAGCCAGGGCTTACATTAGGAGGCTATTTCTGCCCACAGTGTCG GGCAAAGTACTGTGAGCTACCTGTTGAGTGTAAAATCTGTGGTCTTACTTTGGTGTCTGCTCCCCACTTGGCACGGTCTTACCATCATTT GTTTCCTTTGGATGCTTTTCAAGAAATTCCCCTAGAAGAATATAATGGAGAAAGGGTTCCTGAAGTGGTTCAGGAGCTTCCATTAACTTC GCCTGTGGATGACTTCAGGCAGCCTCGTTACAGCAGCGGTGGTAACTTTGAGACACCTTCAAAAAGAGCACCTGCAAAGGGAAGAGCAGG AAGGTCAAAGAGAACAGAGCAAGATCACTATGAGACAGACTACACAACTGGCGGCGAGTCCTGTGATGAGCTGGAGGAGGACTGGATCAG GGAATATCCACCTATCACTTCAGATCAACAAAGACAACTGTACAAGAGGAATTTTGACACTGGCCTACAGGAATACAAGAGCTTACAATC AGAACTTGATGAGATCAATAAAGAACTCTCCCGTTTGGATAAAGAATTGGATGACTATAGAGAAGAAAGTGAAGAGTACATGGCTGCTGC TGATGAATACAATAGACTGAAGCAAGTGAAGGGATCTGCAGATTACAAAAGTAAGAAGAATCATTGCAAGCAGTTAAAGAGCAAATTGTC ACACATCAAGAAGATGGTTGGAGACTATGATAGACAGAAAACATAGAAGGCTGATGCCAAGTTGTTTGAGAAATTAAGTATCTGACATCT CTGCAATCTTCTCAGAAGGCAAATGACTTTGGACCATAACCCCGGAAGCCAAACCTCTGTGAGCATCACAAAGTTTTGGTTGCTTTAACA TCATCAGTATTGAAGCATTTTATAAATCGCTTTTGATAATCAACTGGGCTGAACACTCCAATTAAGGATTTTATGCTTTAAACATTGGTT CTTGTATTAAGAATGAAATACTGTTTGAGGTTTTTAAGCCTTAAAGGAAGGTTCTGGTGTGAACTAAACTTTCACACCCCAGACGATGTC TTCATACCTACATGTATTTGTTTGCATAGGTGATCTCATTTAATCCTCTCAACCACCTTTCAGATAACTGTTATTTATAATCACTTTTTT CCACATAAGGAAACTGGGTTCCTGCAATGAAGTCTCTGAAGTGAAACTGCTTGTTTCCTAGCACACACTTTTGGTTAAGTCTGTTTTATG ACTTCATTAATAATAAATTCCCTGGCCTTTCATATTTTAGCTACTATATATGTGATGATCTACCAGCCTCCCTATTTTTTTTCTGTTATA TAAATGGTTAAAAGAGGTTTTTCTTAAATAATAAAGATCATGTAAAAGTAACAAATGTGTGAAATTTAAAGATTGTAAATATATATTTAC TTTTTTAAGATCAAAGTTTAAACCCCGTGGTTAGAATTTTGTGTGTTTTTAAATACTTTTTATCTTTTTGCATGCCTTTTTTAAAAAACC AACTAGAACTTTTCATTATATCAGAATATCTGATTACATTTATAATTCAATTGTGACTTGAACTGTATCTTACAGGAATGTTCAATTTCT ATACATATTTTATAAGGTATTAAACCTGGTGTTTTCTTTCCATAATAACCTGTTTGATGTTATTAGTGCTGTTAACATACAGCAATGGAA AACCACACTCAGGAGTTGTATCTGTTGTTGTTTATACTCCTTTGGATGCTGTGCTGGTTAGTCGTTTCCCATTCCTTTGGCTGTAAGAAT GCTGATATGTCTGGGAATAGAATGCTATACCACGAAATACCAAATAATTTCAAATGGTGCCCTTAAATTGTATCACTTTTTTAAAAATTC AGATTCTTATTAGTAAAATTAGTTGATAGCACTGTGCTGACCAAGTTGATTGTGATCATCCCAGCTTAGACTTTTCTAAAAACTTTTTTT TAGAATAATCTATAAACTGAACTTTAGTATGCATTTCAGATATTTAGGTATATAATTTTTTTTTTTTTTTGAGACAGAGTCTCACTCTCA CCCAGGCTGGAATGCAGTGGTGCTATCTTGGCTCACTGCAACCTCCACCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCTCGAGTA GTTGAGACTACAGGTGCCCATCACCATGCGTGGCTAATTTTTGTATTTTTAATAGAGACGGGGTTTTACCATAGTGGCCAGGTTGGTCTT GAACTCCTGACCTTGTGGTCTGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCTGGCCTAAGTGTGTGTG TGTGTGTGTGTGTGTATTTTTTTTTTTTTTTTTTTGAGATGGAGTTTTGCTCTTGTTGAACAGGCTGGAGTGCAATGTCGCGATCTCAGC TCACCACAACCTCCGCCTCCCAGGTTCAAACAATTCTCCTGCCTCGGCCTCCCGAGTAGCTGGGATTACAGGCATGCGCCACCACACCTG GCTAATTTTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCATCC ACCTCGGCCTCCCAAAGTGCTGGGATTAGAGGCGTGAGCCACTGTGCCCGGCCTATAATTTTTGATAGATGATTTTGAATTATTTTCCAG AGATAAAATTTTAAATGTTTCCATTATATCACTGATTTATTTCTGCAAATTGAATAAATTCTTAATTTTCTGCATGCACATAATACAAAA GGTATTTTCATAGTTTTGGATTTATACCAAATGAAAAGGATTCTCTTGATGAGCACCTTTAACTGATTTTTCTGTTAAAGTTTTAACAAT TTGTTCTTGGAAGTCAGTTCGTGAAGGCAAGTTTGTCAGTATTTTCACAAAACTATTCAGCTGAATCCAGAAAGTGAAACAGCAAGAATT TGCATTGTAAAATTGTGTTATAAAATTGGACTTTGAAATTTCAAAAATAAGAAAAATTTTCATGTGTATTTATACTAAATACCGTTTTAG GAAACTAGGATCAGGGTGTTTCTGTTGGCGTTGGCATTAACTAGCTGGATGTAAATTTGAAAAGCCACTCAAGCAGCTTCCTAGTCTAGA AAGTCAGAGGTTTAGATTAGATTTCCGACATCCCTTCCATTTCTGACCTGTAGTTCTTGTCTGGAATTCTGCTTTGTTATAAACTATTGT TCTAAGGAGTTTGTTGTGATAGCACATAGTTCATTTTGTAAAGATTCCCTGCGTATAAAGTGATGCCCTACATATGTGATTTTGTATTAA AAGTATATAGGATCATTATTTTATTTTGAAAAATTTAAATACAGAAAAGTATAAAATATAAGTACCATCCGCCCAGAAATAACATGTGTT AATGTTTTGTCATATGTGCTTTATATTTTTTGAAATAAAGTGAAGTCAACTAGTATTTATAGTAAATAAGTTACATACACATAAGTACAT ATATGATATTTAATCCTCACAACGATCTTTTGACATGTGACCATTTCTTATTCTTCTTTTATAGACAAGGAACTAATGATATGATAGATT AACTGGCTGTTGTCACACTAGCAAGTGGCAAAACAAGGGATTAGGATCTTAGTCTCTTCAACTGTTAGATTCTATACTTCCATCCTGTGT TGACTTTGTTAATGGATTGGATAATGTGAGATCACTCTGATGTAAATAAAGTATCCTATATTAATTTCGAGTGCATTTTAAGTACTTGTA ACATAAATGCTTCCTGTGAAATATCTGTAAAGACCTGAATGGGTACATGTGTGTAAAGAAGAATCAGGGCAGAAAAGTGCTTTTATCATG GCTCCGGGGACCTTAGCTTCAGTTGGTGTTGTGAGAATTCCTCACACAAGGACATTCTCCTTGCTTCAGCATCAGGATGGAAGTGTTTCT CATCTGGACTTTTTCAAAGACTCAGCTGGAGGAATCAGAATTCATAATTTCCTGGCAGCTCATGATTCTGCTACACTACACCATGCCATC TCTTGTGTGAAAGGACAGATTTGATGGAGGACTATGTCATCCCTCATGCGTTTCTTATTGTCTACATTTATTCTAATGGGAAGAAGTGAG CAAAAACACCTCAATAATTTGGGTAGTTTTTAGAAAACCTTGTTAGTAAATTAGAATAGTGCCACTTTGGCATTATGAGAAAGAAGCATG GATACATAACTAGGGTTTTGTGTATGACTACAACGAAATGCAGAATGGTGTCTCCAAAAGGTTTCCAATTGCTGCCACAAGAACTGCTTG GTATTGCCTACATGTGTTGTCCTATTTTTGCTTTGCCCTTCTGCAGTTACTTGCTGTGGGACCTTGGAGAAATTAACTTAGCCTCTCTGT ACTTCAGTTTTTTGTATTTGTAAAATATATTTGTAATAATCTCATAGTTAAGAAGGTAGTTAATGTGTGACTCAGTCCTTGTCTAAAAGT AAATATGCCTAGCTACCCCCATCTTCCAAAGCCAGAAGGTGAAACTTTAACAAGTTTTCTAAAAGCAAATTGTGTTTTTTAAAAGTGCAT GTGTCATCCAATCCCATATGATTGATCTGTGCTGGGTGCAGCCTTAGAATGTAAATTCTTTTGAATTCTAGGCAGAGAATGCAGGATTGG CATTCTAAATATTTGTACATGATAAACAAATGCTTCTTTAGGTTAGAGCAAATAGTTTACTTATCAAGATCACAATTGTTAGATACTGTT GTCAATTACAGAGGTTTTAGATGAGGCTTTCTGGAATGATTTAGTTTCCCTGTAAGGGAGCCTGTCTATTGGAATAGACAGGTTCACTTC TCCCAGTCTTTCAAGTTGCATGCTTTTTATATCTGATTCCACTGGCTGAGCTGATTGTGAATGTCCTAACCCTGTTGATTGTGTCTGGCC ACTCATGGGCAAAGAACAGATTATCCATTCTTTATAGTTGTCTTTTAGTTTTACAAGTTGAAAAAACATCTGAGTAGGTTAGATAATTTA TTCTACCACTTTGTAAATGATTAGAATATGTCAGTCATAATCATGCCAAGAGATTATGGATTTATGCATATTTTGTTTTGCTGTAGTACC >In-frame_ENST00000425596_ENST00000355237_TCGA-VR-A8EU_GTF2H2_chr5_70337349_-_OCLN_chr5_68840731_length(amino acids)=462AA_start in transcript=277_stop in transcript=1665 MRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYN SLSIAMQTLKHMPGHTSREVLIIFSSLTTCDPSNIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVS PPPASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCELPVECKICGLTLVSAPHLARSYHHLFP LDAFQEIPLEEYNGERVPEVVQELPLTSPVDDFRQPRYSSGGNFETPSKRAPAKGRAGRSKRTEQDHYETDYTTGGESCDELEEDWIREY PPITSDQQRQLYKRNFDTGLQEYKSLQSELDEINKELSRLDKELDDYREESEEYMAAADEYNRLKQVKGSADYKSKKNHCKQLKSKLSHI -------------------------------------------------------------- >In-frame_ENST00000425596_ENST00000396442_TCGA-VR-A8EU_GTF2H2_chr5_70337349_-_OCLN_chr5_68840731_length(transcript)=1666nt_BP=1134nt GGCTAGCTAGGCGGCTGGGAGCGTTTTCGTGGCGGGGAACGGAGGTTGAATTGCCCTGCCTGGGCTCATAGGGAAGGAGGATGTGAAGGA GCTTGTGAAGGCAGAGGAAGATTATTGAATAATAAAATACAGTTTTGAAAAAAATGGATGAAGAACCTGAAAGAACTAAGCGATGGGAAG GAGGCTATGAAAGAACATGGGAGATTCTTAAAGAAGATGAATCTGGATCACTTAAAGCTACAATAGAAGACATTCTATTCAAGGCAAAGA GAAAAAGATGCGCCACCTTTATGTGGTAGTAGATGGATCAAGAACAATGGAAGACCAAGATTTAAAGCCTAATAGACTGACGTGTACTTT AAAGTTGTTGGAATACTTTGTAGAGGAATATTTTGATCAAAATCCTATTAGTCAGATTGGAATAATTGTAACTAAGAGTAAAAGAGCTGA AAAATTGACTGAACTTTCAGGAAACCCAAGAAAACATATAACGTCTTTGAAGAAAGCTGTGGATATGACCTGCCATGGAGAGCCATCTCT TTATAATTCCCTAAGCATAGCTATGCAGACTCTAAAACACATGCCTGGACATACAAGTCGAGAAGTACTAATCATCTTTAGCAGCCTTAC AACTTGCGATCCATCTAATATTTATGATCTAATCAAGACCCTAAAGGCAGCTAAAATTAGAGTATCTGTTATTGGATTGTCTGCAGAAGT TCGCGTTTGCACTGTACTTGCTCGTGAAACTGGTGGCACGTACCATGTTATTTTAGATGAAAGCCATTACAAAGAGTTGCTCACACATCA TGTTAGTCCTCCTCCTGCTAGCTCAAGTTCTGAATGCTCACTTATTCGTATGGGATTTCCTCAGCACACCATTGCTTCTTTATCTGACCA GGATGCAAAACCCTCTTTCAGCATGGCGCATTTGGATGGCAATACTGAGCCAGGGCTTACATTAGGAGGCTATTTCTGCCCACAGTGTCG GGCAAAGTACTGTGAGCTACCTGTTGAGTGTAAAATCTGTGGTCTTACTTTGGTGTCTGCTCCCCACTTGGCACGGTCTTACCATCATTT GTTTCCTTTGGATGCTTTTCAAGAAATTCCCCTAGAAGAATATAATGGAGAAAGGGTTCCTGAAGTGGTTCAGGAGCTTCCATTAACTTC GCCTGTGGATGACTTCAGGCAGCCTCGTTACAGCAGCGGTGGTAACTTTGAGACACCTTCAAAAAGAGCACCTGCAAAGGGAAGAGCAGG AAGGTCAAAGAGAACAGAGCAAGATCACTATGAGACAGACTACACAACTGGCGGCGAGTCCTGTGATGAGCTGGAGGAGGACTGGATCAG GGAATATCCACCTATCACTTCAGATCAACAAAGACAACTGTACAAGAGGAATTTTGACACTGGCCTACAGGAATACAAGAGCTTACAATC AGAACTTGATGAGATCAATAAAGAACTCTCCCGTTTGGATAAAGAATTGGATGACTATAGAGAAGAAAGTGAAGAGTACATGGCTGCTGC TGATGAATACAATAGACTGAAGCAAGTGAAGGGATCTGCAGATTACAAAAGTAAGAAGAATCATTGCAAGCAGTTAAAGAGCAAATTGTC >In-frame_ENST00000425596_ENST00000396442_TCGA-VR-A8EU_GTF2H2_chr5_70337349_-_OCLN_chr5_68840731_length(amino acids)=463AA_start in transcript=277_stop in transcript=1665 MRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYN SLSIAMQTLKHMPGHTSREVLIIFSSLTTCDPSNIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVS PPPASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCELPVECKICGLTLVSAPHLARSYHHLFP LDAFQEIPLEEYNGERVPEVVQELPLTSPVDDFRQPRYSSGGNFETPSKRAPAKGRAGRSKRTEQDHYETDYTTGGESCDELEEDWIREY PPITSDQQRQLYKRNFDTGLQEYKSLQSELDEINKELSRLDKELDDYREESEEYMAAADEYNRLKQVKGSADYKSKKNHCKQLKSKLSHI -------------------------------------------------------------- >In-frame_ENST00000425596_ENST00000380766_TCGA-VR-A8EU_GTF2H2_chr5_70337349_-_OCLN_chr5_68840731_length(transcript)=2299nt_BP=1134nt GGCTAGCTAGGCGGCTGGGAGCGTTTTCGTGGCGGGGAACGGAGGTTGAATTGCCCTGCCTGGGCTCATAGGGAAGGAGGATGTGAAGGA GCTTGTGAAGGCAGAGGAAGATTATTGAATAATAAAATACAGTTTTGAAAAAAATGGATGAAGAACCTGAAAGAACTAAGCGATGGGAAG GAGGCTATGAAAGAACATGGGAGATTCTTAAAGAAGATGAATCTGGATCACTTAAAGCTACAATAGAAGACATTCTATTCAAGGCAAAGA GAAAAAGATGCGCCACCTTTATGTGGTAGTAGATGGATCAAGAACAATGGAAGACCAAGATTTAAAGCCTAATAGACTGACGTGTACTTT AAAGTTGTTGGAATACTTTGTAGAGGAATATTTTGATCAAAATCCTATTAGTCAGATTGGAATAATTGTAACTAAGAGTAAAAGAGCTGA AAAATTGACTGAACTTTCAGGAAACCCAAGAAAACATATAACGTCTTTGAAGAAAGCTGTGGATATGACCTGCCATGGAGAGCCATCTCT TTATAATTCCCTAAGCATAGCTATGCAGACTCTAAAACACATGCCTGGACATACAAGTCGAGAAGTACTAATCATCTTTAGCAGCCTTAC AACTTGCGATCCATCTAATATTTATGATCTAATCAAGACCCTAAAGGCAGCTAAAATTAGAGTATCTGTTATTGGATTGTCTGCAGAAGT TCGCGTTTGCACTGTACTTGCTCGTGAAACTGGTGGCACGTACCATGTTATTTTAGATGAAAGCCATTACAAAGAGTTGCTCACACATCA TGTTAGTCCTCCTCCTGCTAGCTCAAGTTCTGAATGCTCACTTATTCGTATGGGATTTCCTCAGCACACCATTGCTTCTTTATCTGACCA GGATGCAAAACCCTCTTTCAGCATGGCGCATTTGGATGGCAATACTGAGCCAGGGCTTACATTAGGAGGCTATTTCTGCCCACAGTGTCG GGCAAAGTACTGTGAGCTACCTGTTGAGTGTAAAATCTGTGGTCTTACTTTGGTGTCTGCTCCCCACTTGGCACGGTCTTACCATCATTT GTTTCCTTTGGATGCTTTTCAAGAAATTCCCCTAGAAGAATATAATGGAGAAAGGGTTCCTGAAGTGGTTCAGGAGCTTCCATTAACTTC GCCTGTGGATGACTTCAGGCAGCCTCGTTACAGCAGCGGTGGTAACTTTGAGACACCTTCAAAAAGAGCACCTGCAAAGGGAAGAGCAGG AAGGTCAAAGAGAACAGAGCAAGATCACTATGAGACAGACTACACAACTGGCGGCGAGTCCTGTGATGAGCTGGAGGAGGACTGGATCAG GGAATATCCACCTATCACTTCAGATCAACAAAGACAACTGTACAAGAGGAATTTTGACACTGGCCTACAGGAATACAAGAGCTTACAATC AGAACTTGATGAGATCAATAAAGAACTCTCCCGTTTGGATAAAGAATTGGATGACTATAGAGAAGAAAGTGAAGAGTACATGGCTGCTGC TGATGAATACAATAGACTGAAGCAAGTGAAGGGATCTGCAGATTACAAAAGTAAGAAGAATCATTGCAAGCAGTTAAAGAGCAAATTGTC ACACATCAAGAAGATGGTTGGAGACTATGATAGACAGAAAACATAGAAGGCTGATGCCAAGTTGTTTGAGAAATTAAGTATCTGACATCT CTGCAATCTTCTCAGAAGGCAAATGACTTTGGACCATAACCCCGGAAGCCAAACCTCTGTGAGCATCACAAAGTTTTGGTTGCTTTAACA TCATCAGTATTGAAGCATTTTATAAATCGCTTTTGATAATCAACTGGGCTGAACACTCCAATTAAGGATTTTATGCTTTAAACATTGGTT CTTGTATTAAGAATGAAATACTGTTTGAGGTTTTTAAGCCTTAAAGGAAGGTTCTGGTGTGAACTAAACTTTCACACCCCAGACGATGTC TTCATACCTACATGTATTTGTTTGCATAGGTGATCTCATTTAATCCTCTCAACCACCTTTCAGATAACTGTTATTTATAATCACTTTTTT CCACATAAGGAAACTGGGTTCCTGCAATGAAGTCTCTGAAGTGAAACTGCTTGTTTCCTAGCACACACTTTTGGTTAAGTCTGTTTTATG ACTTCATTAATAATAAATTCCCTGGCCTTTCATATTTTAGCTACTATATATGTGATGATCTACCAGCCTCCCTATTTTTTTTCTGTTATA >In-frame_ENST00000425596_ENST00000380766_TCGA-VR-A8EU_GTF2H2_chr5_70337349_-_OCLN_chr5_68840731_length(amino acids)=462AA_start in transcript=277_stop in transcript=1665 MRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYN SLSIAMQTLKHMPGHTSREVLIIFSSLTTCDPSNIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVS PPPASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCELPVECKICGLTLVSAPHLARSYHHLFP LDAFQEIPLEEYNGERVPEVVQELPLTSPVDDFRQPRYSSGGNFETPSKRAPAKGRAGRSKRTEQDHYETDYTTGGESCDELEEDWIREY PPITSDQQRQLYKRNFDTGLQEYKSLQSELDEINKELSRLDKELDDYREESEEYMAAADEYNRLKQVKGSADYKSKKNHCKQLKSKLSHI -------------------------------------------------------------- >In-frame_ENST00000425596_ENST00000538151_TCGA-VR-A8EU_GTF2H2_chr5_70337349_-_OCLN_chr5_68840731_length(transcript)=1707nt_BP=1134nt GGCTAGCTAGGCGGCTGGGAGCGTTTTCGTGGCGGGGAACGGAGGTTGAATTGCCCTGCCTGGGCTCATAGGGAAGGAGGATGTGAAGGA GCTTGTGAAGGCAGAGGAAGATTATTGAATAATAAAATACAGTTTTGAAAAAAATGGATGAAGAACCTGAAAGAACTAAGCGATGGGAAG GAGGCTATGAAAGAACATGGGAGATTCTTAAAGAAGATGAATCTGGATCACTTAAAGCTACAATAGAAGACATTCTATTCAAGGCAAAGA GAAAAAGATGCGCCACCTTTATGTGGTAGTAGATGGATCAAGAACAATGGAAGACCAAGATTTAAAGCCTAATAGACTGACGTGTACTTT AAAGTTGTTGGAATACTTTGTAGAGGAATATTTTGATCAAAATCCTATTAGTCAGATTGGAATAATTGTAACTAAGAGTAAAAGAGCTGA AAAATTGACTGAACTTTCAGGAAACCCAAGAAAACATATAACGTCTTTGAAGAAAGCTGTGGATATGACCTGCCATGGAGAGCCATCTCT TTATAATTCCCTAAGCATAGCTATGCAGACTCTAAAACACATGCCTGGACATACAAGTCGAGAAGTACTAATCATCTTTAGCAGCCTTAC AACTTGCGATCCATCTAATATTTATGATCTAATCAAGACCCTAAAGGCAGCTAAAATTAGAGTATCTGTTATTGGATTGTCTGCAGAAGT TCGCGTTTGCACTGTACTTGCTCGTGAAACTGGTGGCACGTACCATGTTATTTTAGATGAAAGCCATTACAAAGAGTTGCTCACACATCA TGTTAGTCCTCCTCCTGCTAGCTCAAGTTCTGAATGCTCACTTATTCGTATGGGATTTCCTCAGCACACCATTGCTTCTTTATCTGACCA GGATGCAAAACCCTCTTTCAGCATGGCGCATTTGGATGGCAATACTGAGCCAGGGCTTACATTAGGAGGCTATTTCTGCCCACAGTGTCG GGCAAAGTACTGTGAGCTACCTGTTGAGTGTAAAATCTGTGGTCTTACTTTGGTGTCTGCTCCCCACTTGGCACGGTCTTACCATCATTT GTTTCCTTTGGATGCTTTTCAAGAAATTCCCCTAGAAGAATATAATGGAGAAAGGGTTCCTGAAGTGGTTCAGGAGCTTCCATTAACTTC GCCTGTGGATGACTTCAGGCAGCCTCGTTACAGCAGCGGTGGTAACTTTGAGACACCTTCAAAAAGAGCACCTGCAAAGGGAAGAGCAGG AAGGTCAAAGAGAACAGAGCAAGATCACTATGAGACAGACTACACAACTGGCGGCGAGTCCTGTGATGAGCTGGAGGAGGACTGGATCAG GGAATATCCACCTATCACTTCAGATCAACAAAGACAACTGTACAAGAGGAATTTTGACACTGGCCTACAGGAATACAAGAGCTTACAATC AGAACTTGATGAGATCAATAAAGAACTCTCCCGTTTGGATAAAGAATTGGATGACTATAGAGAAGAAAGTGAAGAGTACATGGCTGCTGC TGATGAATACAATAGACTGAAGCAAGTGAAGGGATCTGCAGATTACAAAAGTAAGAAGAATCATTGCAAGCAGTTAAAGAGCAAATTGTC >In-frame_ENST00000425596_ENST00000538151_TCGA-VR-A8EU_GTF2H2_chr5_70337349_-_OCLN_chr5_68840731_length(amino acids)=462AA_start in transcript=277_stop in transcript=1665 MRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYN SLSIAMQTLKHMPGHTSREVLIIFSSLTTCDPSNIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVS PPPASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCELPVECKICGLTLVSAPHLARSYHHLFP LDAFQEIPLEEYNGERVPEVVQELPLTSPVDDFRQPRYSSGGNFETPSKRAPAKGRAGRSKRTEQDHYETDYTTGGESCDELEEDWIREY PPITSDQQRQLYKRNFDTGLQEYKSLQSELDEINKELSRLDKELDDYREESEEYMAAADEYNRLKQVKGSADYKSKKNHCKQLKSKLSHI -------------------------------------------------------------- >In-frame_ENST00000425596_ENST00000542132_TCGA-VR-A8EU_GTF2H2_chr5_70337349_-_OCLN_chr5_68840731_length(transcript)=1707nt_BP=1134nt GGCTAGCTAGGCGGCTGGGAGCGTTTTCGTGGCGGGGAACGGAGGTTGAATTGCCCTGCCTGGGCTCATAGGGAAGGAGGATGTGAAGGA GCTTGTGAAGGCAGAGGAAGATTATTGAATAATAAAATACAGTTTTGAAAAAAATGGATGAAGAACCTGAAAGAACTAAGCGATGGGAAG GAGGCTATGAAAGAACATGGGAGATTCTTAAAGAAGATGAATCTGGATCACTTAAAGCTACAATAGAAGACATTCTATTCAAGGCAAAGA GAAAAAGATGCGCCACCTTTATGTGGTAGTAGATGGATCAAGAACAATGGAAGACCAAGATTTAAAGCCTAATAGACTGACGTGTACTTT AAAGTTGTTGGAATACTTTGTAGAGGAATATTTTGATCAAAATCCTATTAGTCAGATTGGAATAATTGTAACTAAGAGTAAAAGAGCTGA AAAATTGACTGAACTTTCAGGAAACCCAAGAAAACATATAACGTCTTTGAAGAAAGCTGTGGATATGACCTGCCATGGAGAGCCATCTCT TTATAATTCCCTAAGCATAGCTATGCAGACTCTAAAACACATGCCTGGACATACAAGTCGAGAAGTACTAATCATCTTTAGCAGCCTTAC AACTTGCGATCCATCTAATATTTATGATCTAATCAAGACCCTAAAGGCAGCTAAAATTAGAGTATCTGTTATTGGATTGTCTGCAGAAGT TCGCGTTTGCACTGTACTTGCTCGTGAAACTGGTGGCACGTACCATGTTATTTTAGATGAAAGCCATTACAAAGAGTTGCTCACACATCA TGTTAGTCCTCCTCCTGCTAGCTCAAGTTCTGAATGCTCACTTATTCGTATGGGATTTCCTCAGCACACCATTGCTTCTTTATCTGACCA GGATGCAAAACCCTCTTTCAGCATGGCGCATTTGGATGGCAATACTGAGCCAGGGCTTACATTAGGAGGCTATTTCTGCCCACAGTGTCG GGCAAAGTACTGTGAGCTACCTGTTGAGTGTAAAATCTGTGGTCTTACTTTGGTGTCTGCTCCCCACTTGGCACGGTCTTACCATCATTT GTTTCCTTTGGATGCTTTTCAAGAAATTCCCCTAGAAGAATATAATGGAGAAAGGGTTCCTGAAGTGGTTCAGGAGCTTCCATTAACTTC GCCTGTGGATGACTTCAGGCAGCCTCGTTACAGCAGCGGTGGTAACTTTGAGACACCTTCAAAAAGAGCACCTGCAAAGGGAAGAGCAGG AAGGTCAAAGAGAACAGAGCAAGATCACTATGAGACAGACTACACAACTGGCGGCGAGTCCTGTGATGAGCTGGAGGAGGACTGGATCAG GGAATATCCACCTATCACTTCAGATCAACAAAGACAACTGTACAAGAGGAATTTTGACACTGGCCTACAGGAATACAAGAGCTTACAATC AGAACTTGATGAGATCAATAAAGAACTCTCCCGTTTGGATAAAGAATTGGATGACTATAGAGAAGAAAGTGAAGAGTACATGGCTGCTGC TGATGAATACAATAGACTGAAGCAAGTGAAGGGATCTGCAGATTACAAAAGTAAGAAGAATCATTGCAAGCAGTTAAAGAGCAAATTGTC >In-frame_ENST00000425596_ENST00000542132_TCGA-VR-A8EU_GTF2H2_chr5_70337349_-_OCLN_chr5_68840731_length(amino acids)=462AA_start in transcript=277_stop in transcript=1665 MRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYN SLSIAMQTLKHMPGHTSREVLIIFSSLTTCDPSNIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVS PPPASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCELPVECKICGLTLVSAPHLARSYHHLFP LDAFQEIPLEEYNGERVPEVVQELPLTSPVDDFRQPRYSSGGNFETPSKRAPAKGRAGRSKRTEQDHYETDYTTGGESCDELEEDWIREY PPITSDQQRQLYKRNFDTGLQEYKSLQSELDEINKELSRLDKELDDYREESEEYMAAADEYNRLKQVKGSADYKSKKNHCKQLKSKLSHI -------------------------------------------------------------- >In-frame_ENST00000330280_ENST00000355237_TCGA-VR-A8EU_GTF2H2_chr5_70337349_-_OCLN_chr5_68840731_length(transcript)=6281nt_BP=1316nt GTCCGCGTGTGGAAGTCTGTGAGGCGCAGAGGTGGGGCAGGCCGTCTGGCTAGCTAGGCGGCTGGGAGCGTTTTCGTGGCGGGGAACGGA GGTTGAATTGCCCTGCCTGGGCTCATAGGGAAGGAGGATGTGAAGGAGCTTGTGAAGGCAGAGGAAGGCTGGAGTGCAGTGGCACAACCT TGGCTCGCTCCAGTGTCTACCTGCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGATTATTGAATAATAA AATACAGTTTTGAAAAAAATGGATGAAGAACCTGAAAGAACTAAGCGATGGGAAGGAGGCTATGAAAGAACATGGGAGATTCTTAAAGAA GATGAATCTGGATCACTTAAAGCTACAATAGAAGACATTCTATTCAAGGCAAAGAGAAAAAGAGTATTTGAGCACCATGGACAAGTTCGA CTTGGAATGATGCGCCACCTTTATGTGGTAGTAGATGGATCAAGAACAATGGAAGACCAAGATTTAAAGCCTAATAGACTGACGTGTACT TTAAAGTTGTTGGAATACTTTGTAGAGGAATATTTTGATCAAAATCCTATTAGTCAGATTGGAATAATTGTAACTAAGAGTAAAAGAGCT GAAAAATTGACTGAACTTTCAGGAAACCCAAGAAAACATATAACGTCTTTGAAGAAAGCTGTGGATATGACCTGCCATGGAGAGCCATCT CTTTATAATTCCCTAAGCATAGCTATGCAGACTCTAAAACACATGCCTGGACATACAAGTCGAGAAGTACTAATCATCTTTAGCAGCCTT ACAACTTGCGATCCATCTAATATTTATGATCTAATCAAGACCCTAAAGGCAGCTAAAATTAGAGTATCTGTTATTGGATTGTCTGCAGAA GTTCGCGTTTGCACTGTACTTGCTCGTGAAACTGGTGGCACGTACCATGTTATTTTAGATGAAAGCCATTACAAAGAGTTGCTCACACAT CATGTTAGTCCTCCTCCTGCTAGCTCAAGTTCTGAATGCTCACTTATTCGTATGGGATTTCCTCAGCACACCATTGCTTCTTTATCTGAC CAGGATGCAAAACCCTCTTTCAGCATGGCGCATTTGGATGGCAATACTGAGCCAGGGCTTACATTAGGAGGCTATTTCTGCCCACAGTGT CGGGCAAAGTACTGTGAGCTACCTGTTGAGTGTAAAATCTGTGGTCTTACTTTGGTGTCTGCTCCCCACTTGGCACGGTCTTACCATCAT TTGTTTCCTTTGGATGCTTTTCAAGAAATTCCCCTAGAAGAATATAATGGAGAAAGGGTTCCTGAAGTGGTTCAGGAGCTTCCATTAACT TCGCCTGTGGATGACTTCAGGCAGCCTCGTTACAGCAGCGGTGGTAACTTTGAGACACCTTCAAAAAGAGCACCTGCAAAGGGAAGAGCA GGAAGGTCAAAGAGAACAGAGCAAGATCACTATGAGACAGACTACACAACTGGCGGCGAGTCCTGTGATGAGCTGGAGGAGGACTGGATC AGGGAATATCCACCTATCACTTCAGATCAACAAAGACAACTGTACAAGAGGAATTTTGACACTGGCCTACAGGAATACAAGAGCTTACAA TCAGAACTTGATGAGATCAATAAAGAACTCTCCCGTTTGGATAAAGAATTGGATGACTATAGAGAAGAAAGTGAAGAGTACATGGCTGCT GCTGATGAATACAATAGACTGAAGCAAGTGAAGGGATCTGCAGATTACAAAAGTAAGAAGAATCATTGCAAGCAGTTAAAGAGCAAATTG TCACACATCAAGAAGATGGTTGGAGACTATGATAGACAGAAAACATAGAAGGCTGATGCCAAGTTGTTTGAGAAATTAAGTATCTGACAT CTCTGCAATCTTCTCAGAAGGCAAATGACTTTGGACCATAACCCCGGAAGCCAAACCTCTGTGAGCATCACAAAGTTTTGGTTGCTTTAA CATCATCAGTATTGAAGCATTTTATAAATCGCTTTTGATAATCAACTGGGCTGAACACTCCAATTAAGGATTTTATGCTTTAAACATTGG TTCTTGTATTAAGAATGAAATACTGTTTGAGGTTTTTAAGCCTTAAAGGAAGGTTCTGGTGTGAACTAAACTTTCACACCCCAGACGATG TCTTCATACCTACATGTATTTGTTTGCATAGGTGATCTCATTTAATCCTCTCAACCACCTTTCAGATAACTGTTATTTATAATCACTTTT TTCCACATAAGGAAACTGGGTTCCTGCAATGAAGTCTCTGAAGTGAAACTGCTTGTTTCCTAGCACACACTTTTGGTTAAGTCTGTTTTA TGACTTCATTAATAATAAATTCCCTGGCCTTTCATATTTTAGCTACTATATATGTGATGATCTACCAGCCTCCCTATTTTTTTTCTGTTA TATAAATGGTTAAAAGAGGTTTTTCTTAAATAATAAAGATCATGTAAAAGTAACAAATGTGTGAAATTTAAAGATTGTAAATATATATTT ACTTTTTTAAGATCAAAGTTTAAACCCCGTGGTTAGAATTTTGTGTGTTTTTAAATACTTTTTATCTTTTTGCATGCCTTTTTTAAAAAA CCAACTAGAACTTTTCATTATATCAGAATATCTGATTACATTTATAATTCAATTGTGACTTGAACTGTATCTTACAGGAATGTTCAATTT CTATACATATTTTATAAGGTATTAAACCTGGTGTTTTCTTTCCATAATAACCTGTTTGATGTTATTAGTGCTGTTAACATACAGCAATGG AAAACCACACTCAGGAGTTGTATCTGTTGTTGTTTATACTCCTTTGGATGCTGTGCTGGTTAGTCGTTTCCCATTCCTTTGGCTGTAAGA ATGCTGATATGTCTGGGAATAGAATGCTATACCACGAAATACCAAATAATTTCAAATGGTGCCCTTAAATTGTATCACTTTTTTAAAAAT TCAGATTCTTATTAGTAAAATTAGTTGATAGCACTGTGCTGACCAAGTTGATTGTGATCATCCCAGCTTAGACTTTTCTAAAAACTTTTT TTTAGAATAATCTATAAACTGAACTTTAGTATGCATTTCAGATATTTAGGTATATAATTTTTTTTTTTTTTTGAGACAGAGTCTCACTCT CACCCAGGCTGGAATGCAGTGGTGCTATCTTGGCTCACTGCAACCTCCACCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCTCGAG TAGTTGAGACTACAGGTGCCCATCACCATGCGTGGCTAATTTTTGTATTTTTAATAGAGACGGGGTTTTACCATAGTGGCCAGGTTGGTC TTGAACTCCTGACCTTGTGGTCTGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCTGGCCTAAGTGTGTG TGTGTGTGTGTGTGTGTATTTTTTTTTTTTTTTTTTTGAGATGGAGTTTTGCTCTTGTTGAACAGGCTGGAGTGCAATGTCGCGATCTCA GCTCACCACAACCTCCGCCTCCCAGGTTCAAACAATTCTCCTGCCTCGGCCTCCCGAGTAGCTGGGATTACAGGCATGCGCCACCACACC TGGCTAATTTTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCAT CCACCTCGGCCTCCCAAAGTGCTGGGATTAGAGGCGTGAGCCACTGTGCCCGGCCTATAATTTTTGATAGATGATTTTGAATTATTTTCC AGAGATAAAATTTTAAATGTTTCCATTATATCACTGATTTATTTCTGCAAATTGAATAAATTCTTAATTTTCTGCATGCACATAATACAA AAGGTATTTTCATAGTTTTGGATTTATACCAAATGAAAAGGATTCTCTTGATGAGCACCTTTAACTGATTTTTCTGTTAAAGTTTTAACA ATTTGTTCTTGGAAGTCAGTTCGTGAAGGCAAGTTTGTCAGTATTTTCACAAAACTATTCAGCTGAATCCAGAAAGTGAAACAGCAAGAA TTTGCATTGTAAAATTGTGTTATAAAATTGGACTTTGAAATTTCAAAAATAAGAAAAATTTTCATGTGTATTTATACTAAATACCGTTTT AGGAAACTAGGATCAGGGTGTTTCTGTTGGCGTTGGCATTAACTAGCTGGATGTAAATTTGAAAAGCCACTCAAGCAGCTTCCTAGTCTA GAAAGTCAGAGGTTTAGATTAGATTTCCGACATCCCTTCCATTTCTGACCTGTAGTTCTTGTCTGGAATTCTGCTTTGTTATAAACTATT GTTCTAAGGAGTTTGTTGTGATAGCACATAGTTCATTTTGTAAAGATTCCCTGCGTATAAAGTGATGCCCTACATATGTGATTTTGTATT AAAAGTATATAGGATCATTATTTTATTTTGAAAAATTTAAATACAGAAAAGTATAAAATATAAGTACCATCCGCCCAGAAATAACATGTG TTAATGTTTTGTCATATGTGCTTTATATTTTTTGAAATAAAGTGAAGTCAACTAGTATTTATAGTAAATAAGTTACATACACATAAGTAC ATATATGATATTTAATCCTCACAACGATCTTTTGACATGTGACCATTTCTTATTCTTCTTTTATAGACAAGGAACTAATGATATGATAGA TTAACTGGCTGTTGTCACACTAGCAAGTGGCAAAACAAGGGATTAGGATCTTAGTCTCTTCAACTGTTAGATTCTATACTTCCATCCTGT GTTGACTTTGTTAATGGATTGGATAATGTGAGATCACTCTGATGTAAATAAAGTATCCTATATTAATTTCGAGTGCATTTTAAGTACTTG TAACATAAATGCTTCCTGTGAAATATCTGTAAAGACCTGAATGGGTACATGTGTGTAAAGAAGAATCAGGGCAGAAAAGTGCTTTTATCA TGGCTCCGGGGACCTTAGCTTCAGTTGGTGTTGTGAGAATTCCTCACACAAGGACATTCTCCTTGCTTCAGCATCAGGATGGAAGTGTTT CTCATCTGGACTTTTTCAAAGACTCAGCTGGAGGAATCAGAATTCATAATTTCCTGGCAGCTCATGATTCTGCTACACTACACCATGCCA TCTCTTGTGTGAAAGGACAGATTTGATGGAGGACTATGTCATCCCTCATGCGTTTCTTATTGTCTACATTTATTCTAATGGGAAGAAGTG AGCAAAAACACCTCAATAATTTGGGTAGTTTTTAGAAAACCTTGTTAGTAAATTAGAATAGTGCCACTTTGGCATTATGAGAAAGAAGCA TGGATACATAACTAGGGTTTTGTGTATGACTACAACGAAATGCAGAATGGTGTCTCCAAAAGGTTTCCAATTGCTGCCACAAGAACTGCT TGGTATTGCCTACATGTGTTGTCCTATTTTTGCTTTGCCCTTCTGCAGTTACTTGCTGTGGGACCTTGGAGAAATTAACTTAGCCTCTCT GTACTTCAGTTTTTTGTATTTGTAAAATATATTTGTAATAATCTCATAGTTAAGAAGGTAGTTAATGTGTGACTCAGTCCTTGTCTAAAA GTAAATATGCCTAGCTACCCCCATCTTCCAAAGCCAGAAGGTGAAACTTTAACAAGTTTTCTAAAAGCAAATTGTGTTTTTTAAAAGTGC ATGTGTCATCCAATCCCATATGATTGATCTGTGCTGGGTGCAGCCTTAGAATGTAAATTCTTTTGAATTCTAGGCAGAGAATGCAGGATT GGCATTCTAAATATTTGTACATGATAAACAAATGCTTCTTTAGGTTAGAGCAAATAGTTTACTTATCAAGATCACAATTGTTAGATACTG TTGTCAATTACAGAGGTTTTAGATGAGGCTTTCTGGAATGATTTAGTTTCCCTGTAAGGGAGCCTGTCTATTGGAATAGACAGGTTCACT TCTCCCAGTCTTTCAAGTTGCATGCTTTTTATATCTGATTCCACTGGCTGAGCTGATTGTGAATGTCCTAACCCTGTTGATTGTGTCTGG CCACTCATGGGCAAAGAACAGATTATCCATTCTTTATAGTTGTCTTTTAGTTTTACAAGTTGAAAAAACATCTGAGTAGGTTAGATAATT TATTCTACCACTTTGTAAATGATTAGAATATGTCAGTCATAATCATGCCAAGAGATTATGGATTTATGCATATTTTGTTTTGCTGTAGTA >In-frame_ENST00000330280_ENST00000355237_TCGA-VR-A8EU_GTF2H2_chr5_70337349_-_OCLN_chr5_68840731_length(amino acids)=522AA_start in transcript=279_stop in transcript=1847 MKKMDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKL LEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIFSSLTTC DPSNIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPPASSSSECSLIRMGFPQHTIASLSDQDA KPSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERVPEVVQELPLTSPV DDFRQPRYSSGGNFETPSKRAPAKGRAGRSKRTEQDHYETDYTTGGESCDELEEDWIREYPPITSDQQRQLYKRNFDTGLQEYKSLQSEL -------------------------------------------------------------- >In-frame_ENST00000330280_ENST00000396442_TCGA-VR-A8EU_GTF2H2_chr5_70337349_-_OCLN_chr5_68840731_length(transcript)=1848nt_BP=1316nt GTCCGCGTGTGGAAGTCTGTGAGGCGCAGAGGTGGGGCAGGCCGTCTGGCTAGCTAGGCGGCTGGGAGCGTTTTCGTGGCGGGGAACGGA GGTTGAATTGCCCTGCCTGGGCTCATAGGGAAGGAGGATGTGAAGGAGCTTGTGAAGGCAGAGGAAGGCTGGAGTGCAGTGGCACAACCT TGGCTCGCTCCAGTGTCTACCTGCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGATTATTGAATAATAA AATACAGTTTTGAAAAAAATGGATGAAGAACCTGAAAGAACTAAGCGATGGGAAGGAGGCTATGAAAGAACATGGGAGATTCTTAAAGAA GATGAATCTGGATCACTTAAAGCTACAATAGAAGACATTCTATTCAAGGCAAAGAGAAAAAGAGTATTTGAGCACCATGGACAAGTTCGA CTTGGAATGATGCGCCACCTTTATGTGGTAGTAGATGGATCAAGAACAATGGAAGACCAAGATTTAAAGCCTAATAGACTGACGTGTACT TTAAAGTTGTTGGAATACTTTGTAGAGGAATATTTTGATCAAAATCCTATTAGTCAGATTGGAATAATTGTAACTAAGAGTAAAAGAGCT GAAAAATTGACTGAACTTTCAGGAAACCCAAGAAAACATATAACGTCTTTGAAGAAAGCTGTGGATATGACCTGCCATGGAGAGCCATCT CTTTATAATTCCCTAAGCATAGCTATGCAGACTCTAAAACACATGCCTGGACATACAAGTCGAGAAGTACTAATCATCTTTAGCAGCCTT ACAACTTGCGATCCATCTAATATTTATGATCTAATCAAGACCCTAAAGGCAGCTAAAATTAGAGTATCTGTTATTGGATTGTCTGCAGAA GTTCGCGTTTGCACTGTACTTGCTCGTGAAACTGGTGGCACGTACCATGTTATTTTAGATGAAAGCCATTACAAAGAGTTGCTCACACAT CATGTTAGTCCTCCTCCTGCTAGCTCAAGTTCTGAATGCTCACTTATTCGTATGGGATTTCCTCAGCACACCATTGCTTCTTTATCTGAC CAGGATGCAAAACCCTCTTTCAGCATGGCGCATTTGGATGGCAATACTGAGCCAGGGCTTACATTAGGAGGCTATTTCTGCCCACAGTGT CGGGCAAAGTACTGTGAGCTACCTGTTGAGTGTAAAATCTGTGGTCTTACTTTGGTGTCTGCTCCCCACTTGGCACGGTCTTACCATCAT TTGTTTCCTTTGGATGCTTTTCAAGAAATTCCCCTAGAAGAATATAATGGAGAAAGGGTTCCTGAAGTGGTTCAGGAGCTTCCATTAACT TCGCCTGTGGATGACTTCAGGCAGCCTCGTTACAGCAGCGGTGGTAACTTTGAGACACCTTCAAAAAGAGCACCTGCAAAGGGAAGAGCA GGAAGGTCAAAGAGAACAGAGCAAGATCACTATGAGACAGACTACACAACTGGCGGCGAGTCCTGTGATGAGCTGGAGGAGGACTGGATC AGGGAATATCCACCTATCACTTCAGATCAACAAAGACAACTGTACAAGAGGAATTTTGACACTGGCCTACAGGAATACAAGAGCTTACAA TCAGAACTTGATGAGATCAATAAAGAACTCTCCCGTTTGGATAAAGAATTGGATGACTATAGAGAAGAAAGTGAAGAGTACATGGCTGCT GCTGATGAATACAATAGACTGAAGCAAGTGAAGGGATCTGCAGATTACAAAAGTAAGAAGAATCATTGCAAGCAGTTAAAGAGCAAATTG >In-frame_ENST00000330280_ENST00000396442_TCGA-VR-A8EU_GTF2H2_chr5_70337349_-_OCLN_chr5_68840731_length(amino acids)=522AA_start in transcript=279_stop in transcript=1847 MKKMDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKL LEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIFSSLTTC DPSNIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPPASSSSECSLIRMGFPQHTIASLSDQDA KPSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERVPEVVQELPLTSPV DDFRQPRYSSGGNFETPSKRAPAKGRAGRSKRTEQDHYETDYTTGGESCDELEEDWIREYPPITSDQQRQLYKRNFDTGLQEYKSLQSEL -------------------------------------------------------------- >In-frame_ENST00000330280_ENST00000380766_TCGA-VR-A8EU_GTF2H2_chr5_70337349_-_OCLN_chr5_68840731_length(transcript)=2481nt_BP=1316nt GTCCGCGTGTGGAAGTCTGTGAGGCGCAGAGGTGGGGCAGGCCGTCTGGCTAGCTAGGCGGCTGGGAGCGTTTTCGTGGCGGGGAACGGA GGTTGAATTGCCCTGCCTGGGCTCATAGGGAAGGAGGATGTGAAGGAGCTTGTGAAGGCAGAGGAAGGCTGGAGTGCAGTGGCACAACCT TGGCTCGCTCCAGTGTCTACCTGCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGATTATTGAATAATAA AATACAGTTTTGAAAAAAATGGATGAAGAACCTGAAAGAACTAAGCGATGGGAAGGAGGCTATGAAAGAACATGGGAGATTCTTAAAGAA GATGAATCTGGATCACTTAAAGCTACAATAGAAGACATTCTATTCAAGGCAAAGAGAAAAAGAGTATTTGAGCACCATGGACAAGTTCGA CTTGGAATGATGCGCCACCTTTATGTGGTAGTAGATGGATCAAGAACAATGGAAGACCAAGATTTAAAGCCTAATAGACTGACGTGTACT TTAAAGTTGTTGGAATACTTTGTAGAGGAATATTTTGATCAAAATCCTATTAGTCAGATTGGAATAATTGTAACTAAGAGTAAAAGAGCT GAAAAATTGACTGAACTTTCAGGAAACCCAAGAAAACATATAACGTCTTTGAAGAAAGCTGTGGATATGACCTGCCATGGAGAGCCATCT CTTTATAATTCCCTAAGCATAGCTATGCAGACTCTAAAACACATGCCTGGACATACAAGTCGAGAAGTACTAATCATCTTTAGCAGCCTT ACAACTTGCGATCCATCTAATATTTATGATCTAATCAAGACCCTAAAGGCAGCTAAAATTAGAGTATCTGTTATTGGATTGTCTGCAGAA GTTCGCGTTTGCACTGTACTTGCTCGTGAAACTGGTGGCACGTACCATGTTATTTTAGATGAAAGCCATTACAAAGAGTTGCTCACACAT CATGTTAGTCCTCCTCCTGCTAGCTCAAGTTCTGAATGCTCACTTATTCGTATGGGATTTCCTCAGCACACCATTGCTTCTTTATCTGAC CAGGATGCAAAACCCTCTTTCAGCATGGCGCATTTGGATGGCAATACTGAGCCAGGGCTTACATTAGGAGGCTATTTCTGCCCACAGTGT CGGGCAAAGTACTGTGAGCTACCTGTTGAGTGTAAAATCTGTGGTCTTACTTTGGTGTCTGCTCCCCACTTGGCACGGTCTTACCATCAT TTGTTTCCTTTGGATGCTTTTCAAGAAATTCCCCTAGAAGAATATAATGGAGAAAGGGTTCCTGAAGTGGTTCAGGAGCTTCCATTAACT TCGCCTGTGGATGACTTCAGGCAGCCTCGTTACAGCAGCGGTGGTAACTTTGAGACACCTTCAAAAAGAGCACCTGCAAAGGGAAGAGCA GGAAGGTCAAAGAGAACAGAGCAAGATCACTATGAGACAGACTACACAACTGGCGGCGAGTCCTGTGATGAGCTGGAGGAGGACTGGATC AGGGAATATCCACCTATCACTTCAGATCAACAAAGACAACTGTACAAGAGGAATTTTGACACTGGCCTACAGGAATACAAGAGCTTACAA TCAGAACTTGATGAGATCAATAAAGAACTCTCCCGTTTGGATAAAGAATTGGATGACTATAGAGAAGAAAGTGAAGAGTACATGGCTGCT GCTGATGAATACAATAGACTGAAGCAAGTGAAGGGATCTGCAGATTACAAAAGTAAGAAGAATCATTGCAAGCAGTTAAAGAGCAAATTG TCACACATCAAGAAGATGGTTGGAGACTATGATAGACAGAAAACATAGAAGGCTGATGCCAAGTTGTTTGAGAAATTAAGTATCTGACAT CTCTGCAATCTTCTCAGAAGGCAAATGACTTTGGACCATAACCCCGGAAGCCAAACCTCTGTGAGCATCACAAAGTTTTGGTTGCTTTAA CATCATCAGTATTGAAGCATTTTATAAATCGCTTTTGATAATCAACTGGGCTGAACACTCCAATTAAGGATTTTATGCTTTAAACATTGG TTCTTGTATTAAGAATGAAATACTGTTTGAGGTTTTTAAGCCTTAAAGGAAGGTTCTGGTGTGAACTAAACTTTCACACCCCAGACGATG TCTTCATACCTACATGTATTTGTTTGCATAGGTGATCTCATTTAATCCTCTCAACCACCTTTCAGATAACTGTTATTTATAATCACTTTT TTCCACATAAGGAAACTGGGTTCCTGCAATGAAGTCTCTGAAGTGAAACTGCTTGTTTCCTAGCACACACTTTTGGTTAAGTCTGTTTTA TGACTTCATTAATAATAAATTCCCTGGCCTTTCATATTTTAGCTACTATATATGTGATGATCTACCAGCCTCCCTATTTTTTTTCTGTTA >In-frame_ENST00000330280_ENST00000380766_TCGA-VR-A8EU_GTF2H2_chr5_70337349_-_OCLN_chr5_68840731_length(amino acids)=522AA_start in transcript=279_stop in transcript=1847 MKKMDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKL LEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIFSSLTTC DPSNIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPPASSSSECSLIRMGFPQHTIASLSDQDA KPSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERVPEVVQELPLTSPV DDFRQPRYSSGGNFETPSKRAPAKGRAGRSKRTEQDHYETDYTTGGESCDELEEDWIREYPPITSDQQRQLYKRNFDTGLQEYKSLQSEL -------------------------------------------------------------- >In-frame_ENST00000330280_ENST00000538151_TCGA-VR-A8EU_GTF2H2_chr5_70337349_-_OCLN_chr5_68840731_length(transcript)=1889nt_BP=1316nt GTCCGCGTGTGGAAGTCTGTGAGGCGCAGAGGTGGGGCAGGCCGTCTGGCTAGCTAGGCGGCTGGGAGCGTTTTCGTGGCGGGGAACGGA GGTTGAATTGCCCTGCCTGGGCTCATAGGGAAGGAGGATGTGAAGGAGCTTGTGAAGGCAGAGGAAGGCTGGAGTGCAGTGGCACAACCT TGGCTCGCTCCAGTGTCTACCTGCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGATTATTGAATAATAA AATACAGTTTTGAAAAAAATGGATGAAGAACCTGAAAGAACTAAGCGATGGGAAGGAGGCTATGAAAGAACATGGGAGATTCTTAAAGAA GATGAATCTGGATCACTTAAAGCTACAATAGAAGACATTCTATTCAAGGCAAAGAGAAAAAGAGTATTTGAGCACCATGGACAAGTTCGA CTTGGAATGATGCGCCACCTTTATGTGGTAGTAGATGGATCAAGAACAATGGAAGACCAAGATTTAAAGCCTAATAGACTGACGTGTACT TTAAAGTTGTTGGAATACTTTGTAGAGGAATATTTTGATCAAAATCCTATTAGTCAGATTGGAATAATTGTAACTAAGAGTAAAAGAGCT GAAAAATTGACTGAACTTTCAGGAAACCCAAGAAAACATATAACGTCTTTGAAGAAAGCTGTGGATATGACCTGCCATGGAGAGCCATCT CTTTATAATTCCCTAAGCATAGCTATGCAGACTCTAAAACACATGCCTGGACATACAAGTCGAGAAGTACTAATCATCTTTAGCAGCCTT ACAACTTGCGATCCATCTAATATTTATGATCTAATCAAGACCCTAAAGGCAGCTAAAATTAGAGTATCTGTTATTGGATTGTCTGCAGAA GTTCGCGTTTGCACTGTACTTGCTCGTGAAACTGGTGGCACGTACCATGTTATTTTAGATGAAAGCCATTACAAAGAGTTGCTCACACAT CATGTTAGTCCTCCTCCTGCTAGCTCAAGTTCTGAATGCTCACTTATTCGTATGGGATTTCCTCAGCACACCATTGCTTCTTTATCTGAC CAGGATGCAAAACCCTCTTTCAGCATGGCGCATTTGGATGGCAATACTGAGCCAGGGCTTACATTAGGAGGCTATTTCTGCCCACAGTGT CGGGCAAAGTACTGTGAGCTACCTGTTGAGTGTAAAATCTGTGGTCTTACTTTGGTGTCTGCTCCCCACTTGGCACGGTCTTACCATCAT TTGTTTCCTTTGGATGCTTTTCAAGAAATTCCCCTAGAAGAATATAATGGAGAAAGGGTTCCTGAAGTGGTTCAGGAGCTTCCATTAACT TCGCCTGTGGATGACTTCAGGCAGCCTCGTTACAGCAGCGGTGGTAACTTTGAGACACCTTCAAAAAGAGCACCTGCAAAGGGAAGAGCA GGAAGGTCAAAGAGAACAGAGCAAGATCACTATGAGACAGACTACACAACTGGCGGCGAGTCCTGTGATGAGCTGGAGGAGGACTGGATC AGGGAATATCCACCTATCACTTCAGATCAACAAAGACAACTGTACAAGAGGAATTTTGACACTGGCCTACAGGAATACAAGAGCTTACAA TCAGAACTTGATGAGATCAATAAAGAACTCTCCCGTTTGGATAAAGAATTGGATGACTATAGAGAAGAAAGTGAAGAGTACATGGCTGCT GCTGATGAATACAATAGACTGAAGCAAGTGAAGGGATCTGCAGATTACAAAAGTAAGAAGAATCATTGCAAGCAGTTAAAGAGCAAATTG >In-frame_ENST00000330280_ENST00000538151_TCGA-VR-A8EU_GTF2H2_chr5_70337349_-_OCLN_chr5_68840731_length(amino acids)=522AA_start in transcript=279_stop in transcript=1847 MKKMDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKL LEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIFSSLTTC DPSNIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPPASSSSECSLIRMGFPQHTIASLSDQDA KPSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERVPEVVQELPLTSPV DDFRQPRYSSGGNFETPSKRAPAKGRAGRSKRTEQDHYETDYTTGGESCDELEEDWIREYPPITSDQQRQLYKRNFDTGLQEYKSLQSEL -------------------------------------------------------------- >In-frame_ENST00000330280_ENST00000542132_TCGA-VR-A8EU_GTF2H2_chr5_70337349_-_OCLN_chr5_68840731_length(transcript)=1889nt_BP=1316nt GTCCGCGTGTGGAAGTCTGTGAGGCGCAGAGGTGGGGCAGGCCGTCTGGCTAGCTAGGCGGCTGGGAGCGTTTTCGTGGCGGGGAACGGA GGTTGAATTGCCCTGCCTGGGCTCATAGGGAAGGAGGATGTGAAGGAGCTTGTGAAGGCAGAGGAAGGCTGGAGTGCAGTGGCACAACCT TGGCTCGCTCCAGTGTCTACCTGCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGATTATTGAATAATAA AATACAGTTTTGAAAAAAATGGATGAAGAACCTGAAAGAACTAAGCGATGGGAAGGAGGCTATGAAAGAACATGGGAGATTCTTAAAGAA GATGAATCTGGATCACTTAAAGCTACAATAGAAGACATTCTATTCAAGGCAAAGAGAAAAAGAGTATTTGAGCACCATGGACAAGTTCGA CTTGGAATGATGCGCCACCTTTATGTGGTAGTAGATGGATCAAGAACAATGGAAGACCAAGATTTAAAGCCTAATAGACTGACGTGTACT TTAAAGTTGTTGGAATACTTTGTAGAGGAATATTTTGATCAAAATCCTATTAGTCAGATTGGAATAATTGTAACTAAGAGTAAAAGAGCT GAAAAATTGACTGAACTTTCAGGAAACCCAAGAAAACATATAACGTCTTTGAAGAAAGCTGTGGATATGACCTGCCATGGAGAGCCATCT CTTTATAATTCCCTAAGCATAGCTATGCAGACTCTAAAACACATGCCTGGACATACAAGTCGAGAAGTACTAATCATCTTTAGCAGCCTT ACAACTTGCGATCCATCTAATATTTATGATCTAATCAAGACCCTAAAGGCAGCTAAAATTAGAGTATCTGTTATTGGATTGTCTGCAGAA GTTCGCGTTTGCACTGTACTTGCTCGTGAAACTGGTGGCACGTACCATGTTATTTTAGATGAAAGCCATTACAAAGAGTTGCTCACACAT CATGTTAGTCCTCCTCCTGCTAGCTCAAGTTCTGAATGCTCACTTATTCGTATGGGATTTCCTCAGCACACCATTGCTTCTTTATCTGAC CAGGATGCAAAACCCTCTTTCAGCATGGCGCATTTGGATGGCAATACTGAGCCAGGGCTTACATTAGGAGGCTATTTCTGCCCACAGTGT CGGGCAAAGTACTGTGAGCTACCTGTTGAGTGTAAAATCTGTGGTCTTACTTTGGTGTCTGCTCCCCACTTGGCACGGTCTTACCATCAT TTGTTTCCTTTGGATGCTTTTCAAGAAATTCCCCTAGAAGAATATAATGGAGAAAGGGTTCCTGAAGTGGTTCAGGAGCTTCCATTAACT TCGCCTGTGGATGACTTCAGGCAGCCTCGTTACAGCAGCGGTGGTAACTTTGAGACACCTTCAAAAAGAGCACCTGCAAAGGGAAGAGCA GGAAGGTCAAAGAGAACAGAGCAAGATCACTATGAGACAGACTACACAACTGGCGGCGAGTCCTGTGATGAGCTGGAGGAGGACTGGATC AGGGAATATCCACCTATCACTTCAGATCAACAAAGACAACTGTACAAGAGGAATTTTGACACTGGCCTACAGGAATACAAGAGCTTACAA TCAGAACTTGATGAGATCAATAAAGAACTCTCCCGTTTGGATAAAGAATTGGATGACTATAGAGAAGAAAGTGAAGAGTACATGGCTGCT GCTGATGAATACAATAGACTGAAGCAAGTGAAGGGATCTGCAGATTACAAAAGTAAGAAGAATCATTGCAAGCAGTTAAAGAGCAAATTG >In-frame_ENST00000330280_ENST00000542132_TCGA-VR-A8EU_GTF2H2_chr5_70337349_-_OCLN_chr5_68840731_length(amino acids)=522AA_start in transcript=279_stop in transcript=1847 MKKMDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKL LEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIFSSLTTC DPSNIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPPASSSSECSLIRMGFPQHTIASLSDQDA KPSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERVPEVVQELPLTSPV DDFRQPRYSSGGNFETPSKRAPAKGRAGRSKRTEQDHYETDYTTGGESCDELEEDWIREYPPITSDQQRQLYKRNFDTGLQEYKSLQSEL -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for GTF2H2-OCLN |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for GTF2H2-OCLN |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for GTF2H2-OCLN |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | OCLN | C0006142 | Malignant neoplasm of breast | 2 | CTD_human |
Tgene | OCLN | C0678222 | Breast Carcinoma | 2 | CTD_human |
Tgene | OCLN | C1257931 | Mammary Neoplasms, Human | 2 | CTD_human |
Tgene | OCLN | C1458155 | Mammary Neoplasms | 2 | CTD_human |
Tgene | OCLN | C3489725 | Pseudo-TORCH syndrome | 2 | GENOMICS_ENGLAND;ORPHANET |
Tgene | OCLN | C4552078 | PSEUDO-TORCH SYNDROME 1 | 2 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
Tgene | OCLN | C4704874 | Mammary Carcinoma, Human | 2 | CTD_human |
Tgene | OCLN | C0006826 | Malignant Neoplasms | 1 | CTD_human |
Tgene | OCLN | C0007621 | Neoplastic Cell Transformation | 1 | CTD_human |
Tgene | OCLN | C0019156 | Hepatic Veno-Occlusive Disease | 1 | CTD_human |
Tgene | OCLN | C0022660 | Kidney Failure, Acute | 1 | CTD_human |
Tgene | OCLN | C0027651 | Neoplasms | 1 | CTD_human |
Tgene | OCLN | C0035309 | Retinal Diseases | 1 | CTD_human |
Tgene | OCLN | C0038002 | Splenomegaly | 1 | CTD_human |
Tgene | OCLN | C0086692 | Benign Neoplasm | 1 | CTD_human |
Tgene | OCLN | C1565662 | Acute Kidney Insufficiency | 1 | CTD_human |
Tgene | OCLN | C2609414 | Acute kidney injury | 1 | CTD_human |
Tgene | OCLN | C2931662 | Baraitser Brett Piesowicz syndrome | 1 | ORPHANET |