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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:HDLBP-THAP4 (FusionGDB2 ID:35803) |
Fusion Gene Summary for HDLBP-THAP4 |
Fusion gene summary |
Fusion gene information | Fusion gene name: HDLBP-THAP4 | Fusion gene ID: 35803 | Hgene | Tgene | Gene symbol | HDLBP | THAP4 | Gene ID | 3069 | 51078 |
Gene name | high density lipoprotein binding protein | THAP domain containing 4 | |
Synonyms | HBP|PRO2900|VGL | CGI-36|Nb(III)|PP238 | |
Cytomap | 2q37.3 | 2q37.3 | |
Type of gene | protein-coding | protein-coding | |
Description | vigilinHDL-binding protein | THAP domain-containing protein 4epididymis secretory sperm binding proteinnitrobindin | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | Q00341 | . | |
Ensembl transtripts involved in fusion gene | ENST00000391976, ENST00000310931, ENST00000391975, ENST00000427183, ENST00000476807, | ENST00000402136, ENST00000407315, ENST00000402545, ENST00000497486, | |
Fusion gene scores | * DoF score | 26 X 24 X 10=6240 | 10 X 4 X 8=320 |
# samples | 30 | 11 | |
** MAII score | log2(30/6240*10)=-4.37851162325373 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(11/320*10)=-1.5405683813627 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: HDLBP [Title/Abstract] AND THAP4 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | HDLBP(242174536)-THAP4(242524140), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | HDLBP-THAP4 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. HDLBP-THAP4 seems lost the major protein functional domain in Tgene partner, which is a transcription factor due to the frame-shifted ORF. HDLBP-THAP4 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene breakpoints across HDLBP (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across THAP4 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | OV | TCGA-61-1918-01A | HDLBP | chr2 | 242174536 | - | THAP4 | chr2 | 242524140 | - |
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Fusion Gene ORF analysis for HDLBP-THAP4 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000391976 | ENST00000402136 | HDLBP | chr2 | 242174536 | - | THAP4 | chr2 | 242524140 | - |
Frame-shift | ENST00000391976 | ENST00000407315 | HDLBP | chr2 | 242174536 | - | THAP4 | chr2 | 242524140 | - |
Frame-shift | ENST00000391976 | ENST00000402545 | HDLBP | chr2 | 242174536 | - | THAP4 | chr2 | 242524140 | - |
5CDS-intron | ENST00000391976 | ENST00000497486 | HDLBP | chr2 | 242174536 | - | THAP4 | chr2 | 242524140 | - |
In-frame | ENST00000310931 | ENST00000402136 | HDLBP | chr2 | 242174536 | - | THAP4 | chr2 | 242524140 | - |
Frame-shift | ENST00000310931 | ENST00000407315 | HDLBP | chr2 | 242174536 | - | THAP4 | chr2 | 242524140 | - |
Frame-shift | ENST00000310931 | ENST00000402545 | HDLBP | chr2 | 242174536 | - | THAP4 | chr2 | 242524140 | - |
5CDS-intron | ENST00000310931 | ENST00000497486 | HDLBP | chr2 | 242174536 | - | THAP4 | chr2 | 242524140 | - |
Frame-shift | ENST00000391975 | ENST00000402136 | HDLBP | chr2 | 242174536 | - | THAP4 | chr2 | 242524140 | - |
In-frame | ENST00000391975 | ENST00000407315 | HDLBP | chr2 | 242174536 | - | THAP4 | chr2 | 242524140 | - |
In-frame | ENST00000391975 | ENST00000402545 | HDLBP | chr2 | 242174536 | - | THAP4 | chr2 | 242524140 | - |
5CDS-intron | ENST00000391975 | ENST00000497486 | HDLBP | chr2 | 242174536 | - | THAP4 | chr2 | 242524140 | - |
In-frame | ENST00000427183 | ENST00000402136 | HDLBP | chr2 | 242174536 | - | THAP4 | chr2 | 242524140 | - |
Frame-shift | ENST00000427183 | ENST00000407315 | HDLBP | chr2 | 242174536 | - | THAP4 | chr2 | 242524140 | - |
Frame-shift | ENST00000427183 | ENST00000402545 | HDLBP | chr2 | 242174536 | - | THAP4 | chr2 | 242524140 | - |
5CDS-intron | ENST00000427183 | ENST00000497486 | HDLBP | chr2 | 242174536 | - | THAP4 | chr2 | 242524140 | - |
intron-3CDS | ENST00000476807 | ENST00000402136 | HDLBP | chr2 | 242174536 | - | THAP4 | chr2 | 242524140 | - |
intron-3CDS | ENST00000476807 | ENST00000407315 | HDLBP | chr2 | 242174536 | - | THAP4 | chr2 | 242524140 | - |
intron-3CDS | ENST00000476807 | ENST00000402545 | HDLBP | chr2 | 242174536 | - | THAP4 | chr2 | 242524140 | - |
intron-intron | ENST00000476807 | ENST00000497486 | HDLBP | chr2 | 242174536 | - | THAP4 | chr2 | 242524140 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000391976 | HDLBP | chr2 | 242174536 | - | ENST00000402136 | THAP4 | chr2 | 242524140 | - | 3758 | 3437 | 269 | 3556 | 1095 |
ENST00000310931 | HDLBP | chr2 | 242174536 | - | ENST00000402136 | THAP4 | chr2 | 242524140 | - | 3840 | 3519 | 351 | 3638 | 1095 |
ENST00000391975 | HDLBP | chr2 | 242174536 | - | ENST00000407315 | THAP4 | chr2 | 242524140 | - | 3693 | 3372 | 204 | 3491 | 1095 |
ENST00000391975 | HDLBP | chr2 | 242174536 | - | ENST00000402545 | THAP4 | chr2 | 242524140 | - | 3671 | 3372 | 204 | 3491 | 1095 |
ENST00000427183 | HDLBP | chr2 | 242174536 | - | ENST00000402136 | THAP4 | chr2 | 242524140 | - | 3562 | 3241 | 196 | 3360 | 1054 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000391976 | ENST00000402136 | HDLBP | chr2 | 242174536 | - | THAP4 | chr2 | 242524140 | - | 0.003222602 | 0.99677736 |
ENST00000310931 | ENST00000402136 | HDLBP | chr2 | 242174536 | - | THAP4 | chr2 | 242524140 | - | 0.003279072 | 0.99672097 |
ENST00000391975 | ENST00000407315 | HDLBP | chr2 | 242174536 | - | THAP4 | chr2 | 242524140 | - | 0.003266681 | 0.9967333 |
ENST00000391975 | ENST00000402545 | HDLBP | chr2 | 242174536 | - | THAP4 | chr2 | 242524140 | - | 0.003235507 | 0.99676454 |
ENST00000427183 | ENST00000402136 | HDLBP | chr2 | 242174536 | - | THAP4 | chr2 | 242524140 | - | 0.003058464 | 0.9969415 |
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Fusion Genomic Features for HDLBP-THAP4 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for HDLBP-THAP4 |
Go to FGviewer for the breakpoints of chr2:242174536-chr2:242524140 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
HDLBP | . |
FUNCTION: Appears to play a role in cell sterol metabolism. It may function to protect cells from over-accumulation of cholesterol. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000310931 | - | 23 | 28 | 158_229 | 1048.0 | 1269.0 | Domain | KH 1 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000310931 | - | 23 | 28 | 230_302 | 1048.0 | 1269.0 | Domain | KH 2 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000310931 | - | 23 | 28 | 303_371 | 1048.0 | 1269.0 | Domain | KH 3 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000310931 | - | 23 | 28 | 372_442 | 1048.0 | 1269.0 | Domain | KH 4 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000310931 | - | 23 | 28 | 443_514 | 1048.0 | 1269.0 | Domain | KH 5 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000310931 | - | 23 | 28 | 515_588 | 1048.0 | 1269.0 | Domain | KH 6 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000310931 | - | 23 | 28 | 589_660 | 1048.0 | 1269.0 | Domain | KH 7 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000310931 | - | 23 | 28 | 661_734 | 1048.0 | 1269.0 | Domain | KH 8 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000310931 | - | 23 | 28 | 735_807 | 1048.0 | 1269.0 | Domain | KH 9 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000310931 | - | 23 | 28 | 808_880 | 1048.0 | 1269.0 | Domain | KH 10 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000310931 | - | 23 | 28 | 881_979 | 1048.0 | 1269.0 | Domain | KH 11 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391975 | - | 23 | 28 | 158_229 | 1048.0 | 1269.0 | Domain | KH 1 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391975 | - | 23 | 28 | 230_302 | 1048.0 | 1269.0 | Domain | KH 2 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391975 | - | 23 | 28 | 303_371 | 1048.0 | 1269.0 | Domain | KH 3 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391975 | - | 23 | 28 | 372_442 | 1048.0 | 1269.0 | Domain | KH 4 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391975 | - | 23 | 28 | 443_514 | 1048.0 | 1269.0 | Domain | KH 5 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391975 | - | 23 | 28 | 515_588 | 1048.0 | 1269.0 | Domain | KH 6 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391975 | - | 23 | 28 | 589_660 | 1048.0 | 1269.0 | Domain | KH 7 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391975 | - | 23 | 28 | 661_734 | 1048.0 | 1269.0 | Domain | KH 8 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391975 | - | 23 | 28 | 735_807 | 1048.0 | 1269.0 | Domain | KH 9 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391975 | - | 23 | 28 | 808_880 | 1048.0 | 1269.0 | Domain | KH 10 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391975 | - | 23 | 28 | 881_979 | 1048.0 | 1269.0 | Domain | KH 11 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391976 | - | 23 | 28 | 158_229 | 1048.0 | 1269.0 | Domain | KH 1 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391976 | - | 23 | 28 | 230_302 | 1048.0 | 1269.0 | Domain | KH 2 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391976 | - | 23 | 28 | 303_371 | 1048.0 | 1269.0 | Domain | KH 3 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391976 | - | 23 | 28 | 372_442 | 1048.0 | 1269.0 | Domain | KH 4 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391976 | - | 23 | 28 | 443_514 | 1048.0 | 1269.0 | Domain | KH 5 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391976 | - | 23 | 28 | 515_588 | 1048.0 | 1269.0 | Domain | KH 6 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391976 | - | 23 | 28 | 589_660 | 1048.0 | 1269.0 | Domain | KH 7 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391976 | - | 23 | 28 | 661_734 | 1048.0 | 1269.0 | Domain | KH 8 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391976 | - | 23 | 28 | 735_807 | 1048.0 | 1269.0 | Domain | KH 9 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391976 | - | 23 | 28 | 808_880 | 1048.0 | 1269.0 | Domain | KH 10 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391976 | - | 23 | 28 | 881_979 | 1048.0 | 1269.0 | Domain | KH 11 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000427183 | - | 23 | 28 | 158_229 | 1015.0 | 1236.0 | Domain | KH 1 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000427183 | - | 23 | 28 | 230_302 | 1015.0 | 1236.0 | Domain | KH 2 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000427183 | - | 23 | 28 | 303_371 | 1015.0 | 1236.0 | Domain | KH 3 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000427183 | - | 23 | 28 | 372_442 | 1015.0 | 1236.0 | Domain | KH 4 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000427183 | - | 23 | 28 | 443_514 | 1015.0 | 1236.0 | Domain | KH 5 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000427183 | - | 23 | 28 | 515_588 | 1015.0 | 1236.0 | Domain | KH 6 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000427183 | - | 23 | 28 | 589_660 | 1015.0 | 1236.0 | Domain | KH 7 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000427183 | - | 23 | 28 | 661_734 | 1015.0 | 1236.0 | Domain | KH 8 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000427183 | - | 23 | 28 | 735_807 | 1015.0 | 1236.0 | Domain | KH 9 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000427183 | - | 23 | 28 | 808_880 | 1015.0 | 1236.0 | Domain | KH 10 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000427183 | - | 23 | 28 | 881_979 | 1015.0 | 1236.0 | Domain | KH 11 |
Tgene | THAP4 | chr2:242174536 | chr2:242524140 | ENST00000402136 | 3 | 5 | 235_238 | 126.0 | 166.0 | Motif | HCFC1-binding motif (HBM) | |
Tgene | THAP4 | chr2:242174536 | chr2:242524140 | ENST00000402136 | 3 | 5 | 415_577 | 126.0 | 166.0 | Region | Nitrobindin |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000310931 | - | 23 | 28 | 1060_1134 | 1048.0 | 1269.0 | Domain | KH 13 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000310931 | - | 23 | 28 | 1135_1209 | 1048.0 | 1269.0 | Domain | KH 14 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000310931 | - | 23 | 28 | 980_1059 | 1048.0 | 1269.0 | Domain | KH 12 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391975 | - | 23 | 28 | 1060_1134 | 1048.0 | 1269.0 | Domain | KH 13 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391975 | - | 23 | 28 | 1135_1209 | 1048.0 | 1269.0 | Domain | KH 14 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391975 | - | 23 | 28 | 980_1059 | 1048.0 | 1269.0 | Domain | KH 12 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391976 | - | 23 | 28 | 1060_1134 | 1048.0 | 1269.0 | Domain | KH 13 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391976 | - | 23 | 28 | 1135_1209 | 1048.0 | 1269.0 | Domain | KH 14 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000391976 | - | 23 | 28 | 980_1059 | 1048.0 | 1269.0 | Domain | KH 12 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000427183 | - | 23 | 28 | 1060_1134 | 1015.0 | 1236.0 | Domain | KH 13 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000427183 | - | 23 | 28 | 1135_1209 | 1015.0 | 1236.0 | Domain | KH 14 |
Hgene | HDLBP | chr2:242174536 | chr2:242524140 | ENST00000427183 | - | 23 | 28 | 980_1059 | 1015.0 | 1236.0 | Domain | KH 12 |
Tgene | THAP4 | chr2:242174536 | chr2:242524140 | ENST00000407315 | 4 | 6 | 235_238 | 538.0 | 578.0 | Motif | HCFC1-binding motif (HBM) | |
Tgene | THAP4 | chr2:242174536 | chr2:242524140 | ENST00000407315 | 4 | 6 | 415_577 | 538.0 | 578.0 | Region | Nitrobindin | |
Tgene | THAP4 | chr2:242174536 | chr2:242524140 | ENST00000402136 | 3 | 5 | 1_85 | 126.0 | 166.0 | Zinc finger | THAP-type | |
Tgene | THAP4 | chr2:242174536 | chr2:242524140 | ENST00000407315 | 4 | 6 | 1_85 | 538.0 | 578.0 | Zinc finger | THAP-type |
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Fusion Gene Sequence for HDLBP-THAP4 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000391976_ENST00000402136_TCGA-61-1918-01A_HDLBP_chr2_242174536_-_THAP4_chr2_242524140_length(transcript)=3758nt_BP=3437nt GATCGGGGGGCCTCTCTGGGATTGGCTGCGCGCACGTCACGTGGGGCCGACGGGCCCTGCGCAGACCATCGAGTCGGGCGTCCCTCCCCG GGGACGTGGCCTTCCTGTGCCCGGGCTGGGGCCCGCCGCCCCGCGGGGGAGGGCGGAGCTGGCGCGGCCCCTAGCTTTCTCCTTCTGGTG TGGGGCCCGAGCAAAAGCTGGCAGGCTGACAGAGGCGGCCTCAGGACGGACCTTCTGGCTACTGACCGTTTTGCTGTGGTTTTCCCGGAT TGTGTGTAGGTGTGAGATCAACCATGAGTTCCGTTGCAGTTTTGACCCAAGAGAGTTTTGCTGAACACCGAAGTGGGCTGGTTCCGCAAC AAATCAAAGTTGCCACTCTAAATTCAGAAGAGGAGAGCGACCCTCCAACCTACAAGGATGCCTTCCCTCCACTTCCTGAGAAAGCTGCTT GCCTGGAAAGTGCCCAGGAACCCTCTGGAGCCTGGGGGAACAAGATCCGACCCATCAAGGCTTCTGTCATCACTCAGGTGTTCCATGTAC CCCTGGAGGAGAGAAAATACAAGGATATGAACCAGTTTGGAGAAGGTGAACAAGCAAAAATCTGCCTTGAGATCATGCAGAGAACTGGTG CTCACTTGGAGCTGTCTTTGGCCAAAGACCAAGGCCTCTCCATCATGGTGTCAGGAAAGCTGGATGCTGTCATGAAAGCTCGGAAGGACA TTGTTGCTAGACTGCAGACTCAGGCCTCAGCAACTGTTGCCATTCCCAAAGAACACCATCGCTTTGTTATTGGCAAAAATGGAGAGAAAC TGCAAGACTTGGAGCTAAAAACTGCAACCAAAATCCAGATCCCACGCCCAGATGACCCCAGCAATCAGATCAAGATCACTGGCACCAAAG AGGGCATCGAGAAAGCTCGCCATGAAGTCTTACTCATCTCTGCCGAGCAGGACAAACGTGCTGTGGAGAGGCTAGAAGTAGAAAAGGCAT TCCACCCCTTCATCGCTGGGCCGTATAATAGACTGGTTGGCGAGATCATGCAGGAGACAGGCACGCGCATCAACATCCCCCCACCCAGCG TGAACCGGACAGAGATTGTCTTCACTGGAGAGAAGGAACAGTTGGCTCAGGCTGTGGCTCGCATCAAGAAGATTTATGAGGAGAAGAAAA AGAAGACTACAACCATTGCAGTGGAAGTGAAGAAATCCCAACACAAGTATGTCATTGGGCCCAAGGGCAATTCATTGCAGGAGATCCTTG AGAGAACTGGAGTTTCCGTTGAGATCCCACCCTCAGACAGCATCTCTGAGACTGTAATACTTCGAGGCGAACCTGAAAAGTTAGGTCAGG CGTTGACTGAAGTCTATGCCAAGGCCAATAGCTTCACCGTCTCCTCTGTCGCCGCCCCTTCCTGGCTTCACCGTTTCATCATTGGCAAGA AAGGGCAGAACCTGGCCAAAATCACTCAGCAGATGCCAAAGGTTCACATCGAGTTCACAGAGGGCGAAGACAAGATCACCCTGGAGGGCC CTACAGAGGATGTCAATGTGGCCCAGGAACAGATAGAAGGCATGGTCAAAGATTTGATTAACCGGATGGACTATGTGGAGATCAACATCG ACCACAAGTTCCACAGGCACCTCATTGGGAAGAGCGGTGCCAACATAAACAGAATCAAAGACCAGTACAAGGTGTCCGTGCGCATCCCTC CTGACAGTGAGAAGAGCAATTTGATCCGCATCGAGGGGGACCCACAGGGCGTGCAGCAGGCCAAGCGAGAGCTGCTGGAGCTTGCATCTC GCATGGAAAATGAGCGTACCAAGGATCTAATCATTGAGCAAAGATTTCATCGCACAATCATTGGGCAGAAGGGTGAACGGATCCGTGAAA TTCGTGACAAATTCCCAGAGGTCATCATTAACTTTCCAGACCCAGCACAAAAAAGTGACATTGTCCAGCTCAGAGGACCTAAGAATGAGG TGGAAAAATGCACAAAATACATGCAGAAGATGGTGGCAGATCTGGTGGAAAATAGCTATTCAATTTCTGTTCCGATCTTCAAACAGTTTC ACAAGAATATCATTGGGAAAGGAGGCGCAAACATTAAAAAGATTCGTGAAGAAAGCAACACCAAAATCGACCTTCCAGCAGAGAATAGCA ATTCAGAGACCATTATCATCACAGGCAAGCGAGCCAACTGCGAAGCTGCCCGGAGCAGGATTCTGTCTATTCAGAAAGACCTGGCCAACA TAGCCGAGGTAGAGGTCTCCATCCCTGCCAAGCTGCACAACTCCCTCATTGGCACCAAGGGCCGTCTGATCCGCTCCATCATGGAGGAGT GCGGCGGGGTCCACATTCACTTTCCCGTGGAAGGTTCAGGAAGCGACACCGTTGTTATCAGGGGCCCTTCCTCGGATGTGGAGAAGGCCA AGAAGCAGCTCCTGCATCTGGCGGAGGAGAAGCAAACCAAGAGTTTCACTGTTGACATCCGCGCCAAGCCAGAATACCACAAATTCCTCA TCGGCAAGGGGGGCGGCAAAATTCGCAAGGTGCGCGACAGCACTGGAGCACGTGTCATCTTCCCTGCGGCTGAGGACAAGGACCAGGACC TGATCACCATCATTGGAAAGGAGGACGCCGTCCGAGAGGCACAGAAGGAGCTGGAGGCCTTGATCCAAAACCTGGATAATGTGGTGGAAG ACTCCATGCTGGTGGACCCCAAGCACCACCGCCACTTCGTCATCCGCAGAGGCCAGGTCTTGCGGGAGATTGCTGAAGAGTATGGCGGGG TGATGGTCAGCTTCCCACGCTCTGGCACACAGAGCGACAAAGTCACCCTCAAGGGCGCCAAGGACTGTGTGGAGGCAGCCAAGAAACGCA TTCAGGAGATCATTGAGGACCTGGAAGCTCAGGTGACATTAGAATGTGCTATACCCCAGAAATTCCATCGATCTGTCATGGGCCCCAAAG GTTCCAGAATCCAGCAGATTACTCGGGATTTCAGTGTTCAAATTAAATTCCCAGACAGAGAGGAGAACGCAGTTCACAGTACAGAGCCAG TTGTCCAGGAGAATGGGGACGAAGCTGGGGAGGGGAGAGAGGCTAAAGATTGTGACCCCGGCTCTCCAAGGAGGTGTGACATCATCATCA TCTCTGGCCGGAAAGAAAAGTGTGAGGCTGCCAAGGAAGCTCTGGAGGCATTGGTTCCTGTCACCATTGAAGTAGAGGTGCCCTTTGACC TTCACCGTTACGTTATTGGGCAGAAAGGAAGTGGGATCCGCAAGATGATGGATGAGTTTGAGGTGAACATACATGTCCCGGCACCTGAGC TGCAGTCTGACATCATCGCCATCACGGGCCTCGCTGCAAATTTGGACCGGGCCAAGGCTGGACTGCTGGAGCGTGTGAAGGAGCTACAGG CCGAGCAGGAGGACCGGATCACCCGGAAGTTCAGGCTGAATTCTGAAGGCAAACTTGAGCAGACGGTCTCCATGGCAACCACGACACAGC CAATGACTCAGCATCTTCACGTCACCTACAAGAAGGTGACCCCGTAAACCTAGAGCTTCTGGAGCCCTCGGGAGGGCCTGGCTACTGTGC CTCAACGGTTCGGCTCCTCAACAGACAGTCCCTGCGGCAGAAGTGGGTGTGGCCGTGAGCCTCTGCAGGCTCAAGAGTGTTGTCCAGATG >In-frame_ENST00000391976_ENST00000402136_TCGA-61-1918-01A_HDLBP_chr2_242174536_-_THAP4_chr2_242524140_length(amino acids)=1095AA_start in transcript=269_stop in transcript=3556 MCVGVRSTMSSVAVLTQESFAEHRSGLVPQQIKVATLNSEEESDPPTYKDAFPPLPEKAACLESAQEPSGAWGNKIRPIKASVITQVFHV PLEERKYKDMNQFGEGEQAKICLEIMQRTGAHLELSLAKDQGLSIMVSGKLDAVMKARKDIVARLQTQASATVAIPKEHHRFVIGKNGEK LQDLELKTATKIQIPRPDDPSNQIKITGTKEGIEKARHEVLLISAEQDKRAVERLEVEKAFHPFIAGPYNRLVGEIMQETGTRINIPPPS VNRTEIVFTGEKEQLAQAVARIKKIYEEKKKKTTTIAVEVKKSQHKYVIGPKGNSLQEILERTGVSVEIPPSDSISETVILRGEPEKLGQ ALTEVYAKANSFTVSSVAAPSWLHRFIIGKKGQNLAKITQQMPKVHIEFTEGEDKITLEGPTEDVNVAQEQIEGMVKDLINRMDYVEINI DHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSEKSNLIRIEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIRE IRDKFPEVIINFPDPAQKSDIVQLRGPKNEVEKCTKYMQKMVADLVENSYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENS NSETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKA KKQLLHLAEEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQDLITIIGKEDAVREAQKELEALIQNLDNVVE DSMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGTQSDKVTLKGAKDCVEAAKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPK GSRIQQITRDFSVQIKFPDREENAVHSTEPVVQENGDEAGEGREAKDCDPGSPRRCDIIIISGRKEKCEAAKEALEALVPVTIEVEVPFD LHRYVIGQKGSGIRKMMDEFEVNIHVPAPELQSDIIAITGLAANLDRAKAGLLERVKELQAEQEDRITRKFRLNSEGKLEQTVSMATTTQ -------------------------------------------------------------- >In-frame_ENST00000310931_ENST00000402136_TCGA-61-1918-01A_HDLBP_chr2_242174536_-_THAP4_chr2_242524140_length(transcript)=3840nt_BP=3519nt TTTGCCAACTGCTTCCTGGCTCAGTGCGACCTGGCCTTCTTCCCCTCCCCCATGCGGCCGGCTTCCGAGTGCGCAAGCCCAGAGTCGTCC GCGTTGTCCGCCTCTGCGCAAGCGCCGTGCTCCTCCCACGGCAGTTGGCCATATAGAGGCTGGGGGTGGGGGGGGAGGTCAAGCGTAGCC TCTTCTCCTTTACCAAGATGGCGGCTTGTCCCTGTTTCGCCACAGTTCCTACCTTATGAGCTCGGTTTTCTTATGCTTATAAGAGTGGAA CAGCAAAAGCTGGCAGGCTGACAGAGGCGGCCTCAGGACGGACCTTCTGGCTACTGACCGTTTTGCTGTGGTTTTCCCGGATTGTGTGTA GGTGTGAGATCAACCATGAGTTCCGTTGCAGTTTTGACCCAAGAGAGTTTTGCTGAACACCGAAGTGGGCTGGTTCCGCAACAAATCAAA GTTGCCACTCTAAATTCAGAAGAGGAGAGCGACCCTCCAACCTACAAGGATGCCTTCCCTCCACTTCCTGAGAAAGCTGCTTGCCTGGAA AGTGCCCAGGAACCCTCTGGAGCCTGGGGGAACAAGATCCGACCCATCAAGGCTTCTGTCATCACTCAGGTGTTCCATGTACCCCTGGAG GAGAGAAAATACAAGGATATGAACCAGTTTGGAGAAGGTGAACAAGCAAAAATCTGCCTTGAGATCATGCAGAGAACTGGTGCTCACTTG GAGCTGTCTTTGGCCAAAGACCAAGGCCTCTCCATCATGGTGTCAGGAAAGCTGGATGCTGTCATGAAAGCTCGGAAGGACATTGTTGCT AGACTGCAGACTCAGGCCTCAGCAACTGTTGCCATTCCCAAAGAACACCATCGCTTTGTTATTGGCAAAAATGGAGAGAAACTGCAAGAC TTGGAGCTAAAAACTGCAACCAAAATCCAGATCCCACGCCCAGATGACCCCAGCAATCAGATCAAGATCACTGGCACCAAAGAGGGCATC GAGAAAGCTCGCCATGAAGTCTTACTCATCTCTGCCGAGCAGGACAAACGTGCTGTGGAGAGGCTAGAAGTAGAAAAGGCATTCCACCCC TTCATCGCTGGGCCGTATAATAGACTGGTTGGCGAGATCATGCAGGAGACAGGCACGCGCATCAACATCCCCCCACCCAGCGTGAACCGG ACAGAGATTGTCTTCACTGGAGAGAAGGAACAGTTGGCTCAGGCTGTGGCTCGCATCAAGAAGATTTATGAGGAGAAGAAAAAGAAGACT ACAACCATTGCAGTGGAAGTGAAGAAATCCCAACACAAGTATGTCATTGGGCCCAAGGGCAATTCATTGCAGGAGATCCTTGAGAGAACT GGAGTTTCCGTTGAGATCCCACCCTCAGACAGCATCTCTGAGACTGTAATACTTCGAGGCGAACCTGAAAAGTTAGGTCAGGCGTTGACT GAAGTCTATGCCAAGGCCAATAGCTTCACCGTCTCCTCTGTCGCCGCCCCTTCCTGGCTTCACCGTTTCATCATTGGCAAGAAAGGGCAG AACCTGGCCAAAATCACTCAGCAGATGCCAAAGGTTCACATCGAGTTCACAGAGGGCGAAGACAAGATCACCCTGGAGGGCCCTACAGAG GATGTCAATGTGGCCCAGGAACAGATAGAAGGCATGGTCAAAGATTTGATTAACCGGATGGACTATGTGGAGATCAACATCGACCACAAG TTCCACAGGCACCTCATTGGGAAGAGCGGTGCCAACATAAACAGAATCAAAGACCAGTACAAGGTGTCCGTGCGCATCCCTCCTGACAGT GAGAAGAGCAATTTGATCCGCATCGAGGGGGACCCACAGGGCGTGCAGCAGGCCAAGCGAGAGCTGCTGGAGCTTGCATCTCGCATGGAA AATGAGCGTACCAAGGATCTAATCATTGAGCAAAGATTTCATCGCACAATCATTGGGCAGAAGGGTGAACGGATCCGTGAAATTCGTGAC AAATTCCCAGAGGTCATCATTAACTTTCCAGACCCAGCACAAAAAAGTGACATTGTCCAGCTCAGAGGACCTAAGAATGAGGTGGAAAAA TGCACAAAATACATGCAGAAGATGGTGGCAGATCTGGTGGAAAATAGCTATTCAATTTCTGTTCCGATCTTCAAACAGTTTCACAAGAAT ATCATTGGGAAAGGAGGCGCAAACATTAAAAAGATTCGTGAAGAAAGCAACACCAAAATCGACCTTCCAGCAGAGAATAGCAATTCAGAG ACCATTATCATCACAGGCAAGCGAGCCAACTGCGAAGCTGCCCGGAGCAGGATTCTGTCTATTCAGAAAGACCTGGCCAACATAGCCGAG GTAGAGGTCTCCATCCCTGCCAAGCTGCACAACTCCCTCATTGGCACCAAGGGCCGTCTGATCCGCTCCATCATGGAGGAGTGCGGCGGG GTCCACATTCACTTTCCCGTGGAAGGTTCAGGAAGCGACACCGTTGTTATCAGGGGCCCTTCCTCGGATGTGGAGAAGGCCAAGAAGCAG CTCCTGCATCTGGCGGAGGAGAAGCAAACCAAGAGTTTCACTGTTGACATCCGCGCCAAGCCAGAATACCACAAATTCCTCATCGGCAAG GGGGGCGGCAAAATTCGCAAGGTGCGCGACAGCACTGGAGCACGTGTCATCTTCCCTGCGGCTGAGGACAAGGACCAGGACCTGATCACC ATCATTGGAAAGGAGGACGCCGTCCGAGAGGCACAGAAGGAGCTGGAGGCCTTGATCCAAAACCTGGATAATGTGGTGGAAGACTCCATG CTGGTGGACCCCAAGCACCACCGCCACTTCGTCATCCGCAGAGGCCAGGTCTTGCGGGAGATTGCTGAAGAGTATGGCGGGGTGATGGTC AGCTTCCCACGCTCTGGCACACAGAGCGACAAAGTCACCCTCAAGGGCGCCAAGGACTGTGTGGAGGCAGCCAAGAAACGCATTCAGGAG ATCATTGAGGACCTGGAAGCTCAGGTGACATTAGAATGTGCTATACCCCAGAAATTCCATCGATCTGTCATGGGCCCCAAAGGTTCCAGA ATCCAGCAGATTACTCGGGATTTCAGTGTTCAAATTAAATTCCCAGACAGAGAGGAGAACGCAGTTCACAGTACAGAGCCAGTTGTCCAG GAGAATGGGGACGAAGCTGGGGAGGGGAGAGAGGCTAAAGATTGTGACCCCGGCTCTCCAAGGAGGTGTGACATCATCATCATCTCTGGC CGGAAAGAAAAGTGTGAGGCTGCCAAGGAAGCTCTGGAGGCATTGGTTCCTGTCACCATTGAAGTAGAGGTGCCCTTTGACCTTCACCGT TACGTTATTGGGCAGAAAGGAAGTGGGATCCGCAAGATGATGGATGAGTTTGAGGTGAACATACATGTCCCGGCACCTGAGCTGCAGTCT GACATCATCGCCATCACGGGCCTCGCTGCAAATTTGGACCGGGCCAAGGCTGGACTGCTGGAGCGTGTGAAGGAGCTACAGGCCGAGCAG GAGGACCGGATCACCCGGAAGTTCAGGCTGAATTCTGAAGGCAAACTTGAGCAGACGGTCTCCATGGCAACCACGACACAGCCAATGACT CAGCATCTTCACGTCACCTACAAGAAGGTGACCCCGTAAACCTAGAGCTTCTGGAGCCCTCGGGAGGGCCTGGCTACTGTGCCTCAACGG TTCGGCTCCTCAACAGACAGTCCCTGCGGCAGAAGTGGGTGTGGCCGTGAGCCTCTGCAGGCTCAAGAGTGTTGTCCAGATGTTTCTGTA >In-frame_ENST00000310931_ENST00000402136_TCGA-61-1918-01A_HDLBP_chr2_242174536_-_THAP4_chr2_242524140_length(amino acids)=1095AA_start in transcript=351_stop in transcript=3638 MCVGVRSTMSSVAVLTQESFAEHRSGLVPQQIKVATLNSEEESDPPTYKDAFPPLPEKAACLESAQEPSGAWGNKIRPIKASVITQVFHV PLEERKYKDMNQFGEGEQAKICLEIMQRTGAHLELSLAKDQGLSIMVSGKLDAVMKARKDIVARLQTQASATVAIPKEHHRFVIGKNGEK LQDLELKTATKIQIPRPDDPSNQIKITGTKEGIEKARHEVLLISAEQDKRAVERLEVEKAFHPFIAGPYNRLVGEIMQETGTRINIPPPS VNRTEIVFTGEKEQLAQAVARIKKIYEEKKKKTTTIAVEVKKSQHKYVIGPKGNSLQEILERTGVSVEIPPSDSISETVILRGEPEKLGQ ALTEVYAKANSFTVSSVAAPSWLHRFIIGKKGQNLAKITQQMPKVHIEFTEGEDKITLEGPTEDVNVAQEQIEGMVKDLINRMDYVEINI DHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSEKSNLIRIEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIRE IRDKFPEVIINFPDPAQKSDIVQLRGPKNEVEKCTKYMQKMVADLVENSYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENS NSETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKA KKQLLHLAEEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQDLITIIGKEDAVREAQKELEALIQNLDNVVE DSMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGTQSDKVTLKGAKDCVEAAKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPK GSRIQQITRDFSVQIKFPDREENAVHSTEPVVQENGDEAGEGREAKDCDPGSPRRCDIIIISGRKEKCEAAKEALEALVPVTIEVEVPFD LHRYVIGQKGSGIRKMMDEFEVNIHVPAPELQSDIIAITGLAANLDRAKAGLLERVKELQAEQEDRITRKFRLNSEGKLEQTVSMATTTQ -------------------------------------------------------------- >In-frame_ENST00000391975_ENST00000407315_TCGA-61-1918-01A_HDLBP_chr2_242174536_-_THAP4_chr2_242524140_length(transcript)=3693nt_BP=3372nt AGGCGGGATTGGGCCGCCGCCCTATATAGCAGCCGGGGCCCGGGCGCCGCGCCTCGGAGCGTCCCGGCTTCTCCCGCGCGGGGGGCGAGT AAGCCAGCGGCAGGACCAGCGGGCGGGGGCCCACGACAAAAGCTGGCAGGCTGACAGAGGCGGCCTCAGGACGGACCTTCTGGCTACTGA CCGTTTTGCTGTGGTTTTCCCGGATTGTGTGTAGGTGTGAGATCAACCATGAGTTCCGTTGCAGTTTTGACCCAAGAGAGTTTTGCTGAA CACCGAAGTGGGCTGGTTCCGCAACAAATCAAAGTTGCCACTCTAAATTCAGAAGAGGAGAGCGACCCTCCAACCTACAAGGATGCCTTC CCTCCACTTCCTGAGAAAGCTGCTTGCCTGGAAAGTGCCCAGGAACCCTCTGGAGCCTGGGGGAACAAGATCCGACCCATCAAGGCTTCT GTCATCACTCAGGTGTTCCATGTACCCCTGGAGGAGAGAAAATACAAGGATATGAACCAGTTTGGAGAAGGTGAACAAGCAAAAATCTGC CTTGAGATCATGCAGAGAACTGGTGCTCACTTGGAGCTGTCTTTGGCCAAAGACCAAGGCCTCTCCATCATGGTGTCAGGAAAGCTGGAT GCTGTCATGAAAGCTCGGAAGGACATTGTTGCTAGACTGCAGACTCAGGCCTCAGCAACTGTTGCCATTCCCAAAGAACACCATCGCTTT GTTATTGGCAAAAATGGAGAGAAACTGCAAGACTTGGAGCTAAAAACTGCAACCAAAATCCAGATCCCACGCCCAGATGACCCCAGCAAT CAGATCAAGATCACTGGCACCAAAGAGGGCATCGAGAAAGCTCGCCATGAAGTCTTACTCATCTCTGCCGAGCAGGACAAACGTGCTGTG GAGAGGCTAGAAGTAGAAAAGGCATTCCACCCCTTCATCGCTGGGCCGTATAATAGACTGGTTGGCGAGATCATGCAGGAGACAGGCACG CGCATCAACATCCCCCCACCCAGCGTGAACCGGACAGAGATTGTCTTCACTGGAGAGAAGGAACAGTTGGCTCAGGCTGTGGCTCGCATC AAGAAGATTTATGAGGAGAAGAAAAAGAAGACTACAACCATTGCAGTGGAAGTGAAGAAATCCCAACACAAGTATGTCATTGGGCCCAAG GGCAATTCATTGCAGGAGATCCTTGAGAGAACTGGAGTTTCCGTTGAGATCCCACCCTCAGACAGCATCTCTGAGACTGTAATACTTCGA GGCGAACCTGAAAAGTTAGGTCAGGCGTTGACTGAAGTCTATGCCAAGGCCAATAGCTTCACCGTCTCCTCTGTCGCCGCCCCTTCCTGG CTTCACCGTTTCATCATTGGCAAGAAAGGGCAGAACCTGGCCAAAATCACTCAGCAGATGCCAAAGGTTCACATCGAGTTCACAGAGGGC GAAGACAAGATCACCCTGGAGGGCCCTACAGAGGATGTCAATGTGGCCCAGGAACAGATAGAAGGCATGGTCAAAGATTTGATTAACCGG ATGGACTATGTGGAGATCAACATCGACCACAAGTTCCACAGGCACCTCATTGGGAAGAGCGGTGCCAACATAAACAGAATCAAAGACCAG TACAAGGTGTCCGTGCGCATCCCTCCTGACAGTGAGAAGAGCAATTTGATCCGCATCGAGGGGGACCCACAGGGCGTGCAGCAGGCCAAG CGAGAGCTGCTGGAGCTTGCATCTCGCATGGAAAATGAGCGTACCAAGGATCTAATCATTGAGCAAAGATTTCATCGCACAATCATTGGG CAGAAGGGTGAACGGATCCGTGAAATTCGTGACAAATTCCCAGAGGTCATCATTAACTTTCCAGACCCAGCACAAAAAAGTGACATTGTC CAGCTCAGAGGACCTAAGAATGAGGTGGAAAAATGCACAAAATACATGCAGAAGATGGTGGCAGATCTGGTGGAAAATAGCTATTCAATT TCTGTTCCGATCTTCAAACAGTTTCACAAGAATATCATTGGGAAAGGAGGCGCAAACATTAAAAAGATTCGTGAAGAAAGCAACACCAAA ATCGACCTTCCAGCAGAGAATAGCAATTCAGAGACCATTATCATCACAGGCAAGCGAGCCAACTGCGAAGCTGCCCGGAGCAGGATTCTG TCTATTCAGAAAGACCTGGCCAACATAGCCGAGGTAGAGGTCTCCATCCCTGCCAAGCTGCACAACTCCCTCATTGGCACCAAGGGCCGT CTGATCCGCTCCATCATGGAGGAGTGCGGCGGGGTCCACATTCACTTTCCCGTGGAAGGTTCAGGAAGCGACACCGTTGTTATCAGGGGC CCTTCCTCGGATGTGGAGAAGGCCAAGAAGCAGCTCCTGCATCTGGCGGAGGAGAAGCAAACCAAGAGTTTCACTGTTGACATCCGCGCC AAGCCAGAATACCACAAATTCCTCATCGGCAAGGGGGGCGGCAAAATTCGCAAGGTGCGCGACAGCACTGGAGCACGTGTCATCTTCCCT GCGGCTGAGGACAAGGACCAGGACCTGATCACCATCATTGGAAAGGAGGACGCCGTCCGAGAGGCACAGAAGGAGCTGGAGGCCTTGATC CAAAACCTGGATAATGTGGTGGAAGACTCCATGCTGGTGGACCCCAAGCACCACCGCCACTTCGTCATCCGCAGAGGCCAGGTCTTGCGG GAGATTGCTGAAGAGTATGGCGGGGTGATGGTCAGCTTCCCACGCTCTGGCACACAGAGCGACAAAGTCACCCTCAAGGGCGCCAAGGAC TGTGTGGAGGCAGCCAAGAAACGCATTCAGGAGATCATTGAGGACCTGGAAGCTCAGGTGACATTAGAATGTGCTATACCCCAGAAATTC CATCGATCTGTCATGGGCCCCAAAGGTTCCAGAATCCAGCAGATTACTCGGGATTTCAGTGTTCAAATTAAATTCCCAGACAGAGAGGAG AACGCAGTTCACAGTACAGAGCCAGTTGTCCAGGAGAATGGGGACGAAGCTGGGGAGGGGAGAGAGGCTAAAGATTGTGACCCCGGCTCT CCAAGGAGGTGTGACATCATCATCATCTCTGGCCGGAAAGAAAAGTGTGAGGCTGCCAAGGAAGCTCTGGAGGCATTGGTTCCTGTCACC ATTGAAGTAGAGGTGCCCTTTGACCTTCACCGTTACGTTATTGGGCAGAAAGGAAGTGGGATCCGCAAGATGATGGATGAGTTTGAGGTG AACATACATGTCCCGGCACCTGAGCTGCAGTCTGACATCATCGCCATCACGGGCCTCGCTGCAAATTTGGACCGGGCCAAGGCTGGACTG CTGGAGCGTGTGAAGGAGCTACAGGCCGAGCAGGAGGACCGGATCACCCGGAAGTTCAGGCTGAATTCTGAAGGCAAACTTGAGCAGACG GTCTCCATGGCAACCACGACACAGCCAATGACTCAGCATCTTCACGTCACCTACAAGAAGGTGACCCCGTAAACCTAGAGCTTCTGGAGC CCTCGGGAGGGCCTGGCTACTGTGCCTCAACGGTTCGGCTCCTCAACAGACAGTCCCTGCGGCAGAAGTGGGTGTGGCCGTGAGCCTCTG CAGGCTCAAGAGTGTTGTCCAGATGTTTCTGTACTGGCATAGAAAAACCAAATAAAAGGCCTTTATTTTTATGGCTGAGGATTTTGAATA >In-frame_ENST00000391975_ENST00000407315_TCGA-61-1918-01A_HDLBP_chr2_242174536_-_THAP4_chr2_242524140_length(amino acids)=1095AA_start in transcript=204_stop in transcript=3491 MCVGVRSTMSSVAVLTQESFAEHRSGLVPQQIKVATLNSEEESDPPTYKDAFPPLPEKAACLESAQEPSGAWGNKIRPIKASVITQVFHV PLEERKYKDMNQFGEGEQAKICLEIMQRTGAHLELSLAKDQGLSIMVSGKLDAVMKARKDIVARLQTQASATVAIPKEHHRFVIGKNGEK LQDLELKTATKIQIPRPDDPSNQIKITGTKEGIEKARHEVLLISAEQDKRAVERLEVEKAFHPFIAGPYNRLVGEIMQETGTRINIPPPS VNRTEIVFTGEKEQLAQAVARIKKIYEEKKKKTTTIAVEVKKSQHKYVIGPKGNSLQEILERTGVSVEIPPSDSISETVILRGEPEKLGQ ALTEVYAKANSFTVSSVAAPSWLHRFIIGKKGQNLAKITQQMPKVHIEFTEGEDKITLEGPTEDVNVAQEQIEGMVKDLINRMDYVEINI DHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSEKSNLIRIEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIRE IRDKFPEVIINFPDPAQKSDIVQLRGPKNEVEKCTKYMQKMVADLVENSYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENS NSETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKA KKQLLHLAEEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQDLITIIGKEDAVREAQKELEALIQNLDNVVE DSMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGTQSDKVTLKGAKDCVEAAKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPK GSRIQQITRDFSVQIKFPDREENAVHSTEPVVQENGDEAGEGREAKDCDPGSPRRCDIIIISGRKEKCEAAKEALEALVPVTIEVEVPFD LHRYVIGQKGSGIRKMMDEFEVNIHVPAPELQSDIIAITGLAANLDRAKAGLLERVKELQAEQEDRITRKFRLNSEGKLEQTVSMATTTQ -------------------------------------------------------------- >In-frame_ENST00000391975_ENST00000402545_TCGA-61-1918-01A_HDLBP_chr2_242174536_-_THAP4_chr2_242524140_length(transcript)=3671nt_BP=3372nt AGGCGGGATTGGGCCGCCGCCCTATATAGCAGCCGGGGCCCGGGCGCCGCGCCTCGGAGCGTCCCGGCTTCTCCCGCGCGGGGGGCGAGT AAGCCAGCGGCAGGACCAGCGGGCGGGGGCCCACGACAAAAGCTGGCAGGCTGACAGAGGCGGCCTCAGGACGGACCTTCTGGCTACTGA CCGTTTTGCTGTGGTTTTCCCGGATTGTGTGTAGGTGTGAGATCAACCATGAGTTCCGTTGCAGTTTTGACCCAAGAGAGTTTTGCTGAA CACCGAAGTGGGCTGGTTCCGCAACAAATCAAAGTTGCCACTCTAAATTCAGAAGAGGAGAGCGACCCTCCAACCTACAAGGATGCCTTC CCTCCACTTCCTGAGAAAGCTGCTTGCCTGGAAAGTGCCCAGGAACCCTCTGGAGCCTGGGGGAACAAGATCCGACCCATCAAGGCTTCT GTCATCACTCAGGTGTTCCATGTACCCCTGGAGGAGAGAAAATACAAGGATATGAACCAGTTTGGAGAAGGTGAACAAGCAAAAATCTGC CTTGAGATCATGCAGAGAACTGGTGCTCACTTGGAGCTGTCTTTGGCCAAAGACCAAGGCCTCTCCATCATGGTGTCAGGAAAGCTGGAT GCTGTCATGAAAGCTCGGAAGGACATTGTTGCTAGACTGCAGACTCAGGCCTCAGCAACTGTTGCCATTCCCAAAGAACACCATCGCTTT GTTATTGGCAAAAATGGAGAGAAACTGCAAGACTTGGAGCTAAAAACTGCAACCAAAATCCAGATCCCACGCCCAGATGACCCCAGCAAT CAGATCAAGATCACTGGCACCAAAGAGGGCATCGAGAAAGCTCGCCATGAAGTCTTACTCATCTCTGCCGAGCAGGACAAACGTGCTGTG GAGAGGCTAGAAGTAGAAAAGGCATTCCACCCCTTCATCGCTGGGCCGTATAATAGACTGGTTGGCGAGATCATGCAGGAGACAGGCACG CGCATCAACATCCCCCCACCCAGCGTGAACCGGACAGAGATTGTCTTCACTGGAGAGAAGGAACAGTTGGCTCAGGCTGTGGCTCGCATC AAGAAGATTTATGAGGAGAAGAAAAAGAAGACTACAACCATTGCAGTGGAAGTGAAGAAATCCCAACACAAGTATGTCATTGGGCCCAAG GGCAATTCATTGCAGGAGATCCTTGAGAGAACTGGAGTTTCCGTTGAGATCCCACCCTCAGACAGCATCTCTGAGACTGTAATACTTCGA GGCGAACCTGAAAAGTTAGGTCAGGCGTTGACTGAAGTCTATGCCAAGGCCAATAGCTTCACCGTCTCCTCTGTCGCCGCCCCTTCCTGG CTTCACCGTTTCATCATTGGCAAGAAAGGGCAGAACCTGGCCAAAATCACTCAGCAGATGCCAAAGGTTCACATCGAGTTCACAGAGGGC GAAGACAAGATCACCCTGGAGGGCCCTACAGAGGATGTCAATGTGGCCCAGGAACAGATAGAAGGCATGGTCAAAGATTTGATTAACCGG ATGGACTATGTGGAGATCAACATCGACCACAAGTTCCACAGGCACCTCATTGGGAAGAGCGGTGCCAACATAAACAGAATCAAAGACCAG TACAAGGTGTCCGTGCGCATCCCTCCTGACAGTGAGAAGAGCAATTTGATCCGCATCGAGGGGGACCCACAGGGCGTGCAGCAGGCCAAG CGAGAGCTGCTGGAGCTTGCATCTCGCATGGAAAATGAGCGTACCAAGGATCTAATCATTGAGCAAAGATTTCATCGCACAATCATTGGG CAGAAGGGTGAACGGATCCGTGAAATTCGTGACAAATTCCCAGAGGTCATCATTAACTTTCCAGACCCAGCACAAAAAAGTGACATTGTC CAGCTCAGAGGACCTAAGAATGAGGTGGAAAAATGCACAAAATACATGCAGAAGATGGTGGCAGATCTGGTGGAAAATAGCTATTCAATT TCTGTTCCGATCTTCAAACAGTTTCACAAGAATATCATTGGGAAAGGAGGCGCAAACATTAAAAAGATTCGTGAAGAAAGCAACACCAAA ATCGACCTTCCAGCAGAGAATAGCAATTCAGAGACCATTATCATCACAGGCAAGCGAGCCAACTGCGAAGCTGCCCGGAGCAGGATTCTG TCTATTCAGAAAGACCTGGCCAACATAGCCGAGGTAGAGGTCTCCATCCCTGCCAAGCTGCACAACTCCCTCATTGGCACCAAGGGCCGT CTGATCCGCTCCATCATGGAGGAGTGCGGCGGGGTCCACATTCACTTTCCCGTGGAAGGTTCAGGAAGCGACACCGTTGTTATCAGGGGC CCTTCCTCGGATGTGGAGAAGGCCAAGAAGCAGCTCCTGCATCTGGCGGAGGAGAAGCAAACCAAGAGTTTCACTGTTGACATCCGCGCC AAGCCAGAATACCACAAATTCCTCATCGGCAAGGGGGGCGGCAAAATTCGCAAGGTGCGCGACAGCACTGGAGCACGTGTCATCTTCCCT GCGGCTGAGGACAAGGACCAGGACCTGATCACCATCATTGGAAAGGAGGACGCCGTCCGAGAGGCACAGAAGGAGCTGGAGGCCTTGATC CAAAACCTGGATAATGTGGTGGAAGACTCCATGCTGGTGGACCCCAAGCACCACCGCCACTTCGTCATCCGCAGAGGCCAGGTCTTGCGG GAGATTGCTGAAGAGTATGGCGGGGTGATGGTCAGCTTCCCACGCTCTGGCACACAGAGCGACAAAGTCACCCTCAAGGGCGCCAAGGAC TGTGTGGAGGCAGCCAAGAAACGCATTCAGGAGATCATTGAGGACCTGGAAGCTCAGGTGACATTAGAATGTGCTATACCCCAGAAATTC CATCGATCTGTCATGGGCCCCAAAGGTTCCAGAATCCAGCAGATTACTCGGGATTTCAGTGTTCAAATTAAATTCCCAGACAGAGAGGAG AACGCAGTTCACAGTACAGAGCCAGTTGTCCAGGAGAATGGGGACGAAGCTGGGGAGGGGAGAGAGGCTAAAGATTGTGACCCCGGCTCT CCAAGGAGGTGTGACATCATCATCATCTCTGGCCGGAAAGAAAAGTGTGAGGCTGCCAAGGAAGCTCTGGAGGCATTGGTTCCTGTCACC ATTGAAGTAGAGGTGCCCTTTGACCTTCACCGTTACGTTATTGGGCAGAAAGGAAGTGGGATCCGCAAGATGATGGATGAGTTTGAGGTG AACATACATGTCCCGGCACCTGAGCTGCAGTCTGACATCATCGCCATCACGGGCCTCGCTGCAAATTTGGACCGGGCCAAGGCTGGACTG CTGGAGCGTGTGAAGGAGCTACAGGCCGAGCAGGAGGACCGGATCACCCGGAAGTTCAGGCTGAATTCTGAAGGCAAACTTGAGCAGACG GTCTCCATGGCAACCACGACACAGCCAATGACTCAGCATCTTCACGTCACCTACAAGAAGGTGACCCCGTAAACCTAGAGCTTCTGGAGC CCTCGGGAGGGCCTGGCTACTGTGCCTCAACGGTTCGGCTCCTCAACAGACAGTCCCTGCGGCAGAAGTGGGTGTGGCCGTGAGCCTCTG >In-frame_ENST00000391975_ENST00000402545_TCGA-61-1918-01A_HDLBP_chr2_242174536_-_THAP4_chr2_242524140_length(amino acids)=1095AA_start in transcript=204_stop in transcript=3491 MCVGVRSTMSSVAVLTQESFAEHRSGLVPQQIKVATLNSEEESDPPTYKDAFPPLPEKAACLESAQEPSGAWGNKIRPIKASVITQVFHV PLEERKYKDMNQFGEGEQAKICLEIMQRTGAHLELSLAKDQGLSIMVSGKLDAVMKARKDIVARLQTQASATVAIPKEHHRFVIGKNGEK LQDLELKTATKIQIPRPDDPSNQIKITGTKEGIEKARHEVLLISAEQDKRAVERLEVEKAFHPFIAGPYNRLVGEIMQETGTRINIPPPS VNRTEIVFTGEKEQLAQAVARIKKIYEEKKKKTTTIAVEVKKSQHKYVIGPKGNSLQEILERTGVSVEIPPSDSISETVILRGEPEKLGQ ALTEVYAKANSFTVSSVAAPSWLHRFIIGKKGQNLAKITQQMPKVHIEFTEGEDKITLEGPTEDVNVAQEQIEGMVKDLINRMDYVEINI DHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSEKSNLIRIEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIRE IRDKFPEVIINFPDPAQKSDIVQLRGPKNEVEKCTKYMQKMVADLVENSYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENS NSETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKA KKQLLHLAEEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQDLITIIGKEDAVREAQKELEALIQNLDNVVE DSMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGTQSDKVTLKGAKDCVEAAKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPK GSRIQQITRDFSVQIKFPDREENAVHSTEPVVQENGDEAGEGREAKDCDPGSPRRCDIIIISGRKEKCEAAKEALEALVPVTIEVEVPFD LHRYVIGQKGSGIRKMMDEFEVNIHVPAPELQSDIIAITGLAANLDRAKAGLLERVKELQAEQEDRITRKFRLNSEGKLEQTVSMATTTQ -------------------------------------------------------------- >In-frame_ENST00000427183_ENST00000402136_TCGA-61-1918-01A_HDLBP_chr2_242174536_-_THAP4_chr2_242524140_length(transcript)=3562nt_BP=3241nt GGAGCGTCCCGGCTTCTCCCGCGCGGGGGGCGAGTAAGCCAGCGGCAGGACCAGCGGGCGGGGGCCCACGACAAAAGCTGGCAGGCTGAC AGAGGCGGCCTCAGGACGGACCTTCTGGCTACTGACCGTTTTGCTGCTACCACTTATAACCACCTGGTTAAGTCGAGATTTGGAGGTGGT TTAGTTTGGGGCCTGGATGCACCTTGCAGAGAGAGACCGCTGGCTTTTTGTAGCAACTGTCATGATGCATTTTGTAAGCATTAAGAGTGG TTTTCCCGGATTGTGTGTAGGTGTGAGATCAACCATGAGTTCCGTTGCAGTTTTGACCCAAGAGAGTTTTGCTGAACACCGAAGTGGGCT GGTTCCGCAACAAATCAAAGTTGCCACTCTAAATTCAGAAGAGGAGAGCGACCCTCCAACCTACAAGGATGCCTTCCCTCCACTTCCTGA GAAAGCTGCTTGCCTGGAAAGTGCCCAGGAACCCTCTGGAGCCTGGGGGAACAAGATCCGACCCATCAAGGCTTCTGTCATCACTCAGGT GTTCCATGTACCCCTGGAGGAGAGAAAATACAAGGATATGAACCAGTTTGGAGAAGGTGAACAAGCAAAAATCTGCCTTGAGATCATGCA GAGAACTGGTGCTCACTTGGAGCTGTCTTTGGCCAAAGACCAAGGCCTCTCCATCATGGTGTCAGGAAAGCTGGATGCTGTCATGAAAGC TCGGAAGGACATTGTTGCTAGACTGCAGACTCAGGCCTCAGCAACTGTTGCCATTCCCAAAGAACACCATCGCTTTGTTATTGGCAAAAA TGGAGAGAAACTGCAAGACTTGGAGCTAAAAACTGCAACCAAAATCCAGATCCCACGCCCAGATGACCCCAGCAATCAGATCAAGATCAC TGGCACCAAAGAGGGCATCGAGAAAGCTCGCCATGAAGTCTTACTCATCTCTGCCGAGCAGGACAAACGTGCTGTGGAGAGGCTAGAAGT AGAAAAGGCATTCCACCCCTTCATCGCTGGGCCGTATAATAGACTGGTTGGCGAGATCATGCAGGAGACAGGCACGCGCATCAACATCCC CCCACCCAGCGTGAACCGGACAGAGATTGTCTTCACTGGAGAGAAGGAACAGTTGGCTCAGGCTGTGGCTCGCATCAAGAAGATTTATGA GGAGAAGGCCAATAGCTTCACCGTCTCCTCTGTCGCCGCCCCTTCCTGGCTTCACCGTTTCATCATTGGCAAGAAAGGGCAGAACCTGGC CAAAATCACTCAGCAGATGCCAAAGGTTCACATCGAGTTCACAGAGGGCGAAGACAAGATCACCCTGGAGGGCCCTACAGAGGATGTCAA TGTGGCCCAGGAACAGATAGAAGGCATGGTCAAAGATTTGATTAACCGGATGGACTATGTGGAGATCAACATCGACCACAAGTTCCACAG GCACCTCATTGGGAAGAGCGGTGCCAACATAAACAGAATCAAAGACCAGTACAAGGTGTCCGTGCGCATCCCTCCTGACAGTGAGAAGAG CAATTTGATCCGCATCGAGGGGGACCCACAGGGCGTGCAGCAGGCCAAGCGAGAGCTGCTGGAGCTTGCATCTCGCATGGAAAATGAGCG TACCAAGGATCTAATCATTGAGCAAAGATTTCATCGCACAATCATTGGGCAGAAGGGTGAACGGATCCGTGAAATTCGTGACAAATTCCC AGAGGTCATCATTAACTTTCCAGACCCAGCACAAAAAAGTGACATTGTCCAGCTCAGAGGACCTAAGAATGAGGTGGAAAAATGCACAAA ATACATGCAGAAGATGGTGGCAGATCTGGTGGAAAATAGCTATTCAATTTCTGTTCCGATCTTCAAACAGTTTCACAAGAATATCATTGG GAAAGGAGGCGCAAACATTAAAAAGATTCGTGAAGAAAGCAACACCAAAATCGACCTTCCAGCAGAGAATAGCAATTCAGAGACCATTAT CATCACAGGCAAGCGAGCCAACTGCGAAGCTGCCCGGAGCAGGATTCTGTCTATTCAGAAAGACCTGGCCAACATAGCCGAGGTAGAGGT CTCCATCCCTGCCAAGCTGCACAACTCCCTCATTGGCACCAAGGGCCGTCTGATCCGCTCCATCATGGAGGAGTGCGGCGGGGTCCACAT TCACTTTCCCGTGGAAGGTTCAGGAAGCGACACCGTTGTTATCAGGGGCCCTTCCTCGGATGTGGAGAAGGCCAAGAAGCAGCTCCTGCA TCTGGCGGAGGAGAAGCAAACCAAGAGTTTCACTGTTGACATCCGCGCCAAGCCAGAATACCACAAATTCCTCATCGGCAAGGGGGGCGG CAAAATTCGCAAGGTGCGCGACAGCACTGGAGCACGTGTCATCTTCCCTGCGGCTGAGGACAAGGACCAGGACCTGATCACCATCATTGG AAAGGAGGACGCCGTCCGAGAGGCACAGAAGGAGCTGGAGGCCTTGATCCAAAACCTGGATAATGTGGTGGAAGACTCCATGCTGGTGGA CCCCAAGCACCACCGCCACTTCGTCATCCGCAGAGGCCAGGTCTTGCGGGAGATTGCTGAAGAGTATGGCGGGGTGATGGTCAGCTTCCC ACGCTCTGGCACACAGAGCGACAAAGTCACCCTCAAGGGCGCCAAGGACTGTGTGGAGGCAGCCAAGAAACGCATTCAGGAGATCATTGA GGACCTGGAAGCTCAGGTGACATTAGAATGTGCTATACCCCAGAAATTCCATCGATCTGTCATGGGCCCCAAAGGTTCCAGAATCCAGCA GATTACTCGGGATTTCAGTGTTCAAATTAAATTCCCAGACAGAGAGGAGAACGCAGTTCACAGTACAGAGCCAGTTGTCCAGGAGAATGG GGACGAAGCTGGGGAGGGGAGAGAGGCTAAAGATTGTGACCCCGGCTCTCCAAGGAGGTGTGACATCATCATCATCTCTGGCCGGAAAGA AAAGTGTGAGGCTGCCAAGGAAGCTCTGGAGGCATTGGTTCCTGTCACCATTGAAGTAGAGGTGCCCTTTGACCTTCACCGTTACGTTAT TGGGCAGAAAGGAAGTGGGATCCGCAAGATGATGGATGAGTTTGAGGTGAACATACATGTCCCGGCACCTGAGCTGCAGTCTGACATCAT CGCCATCACGGGCCTCGCTGCAAATTTGGACCGGGCCAAGGCTGGACTGCTGGAGCGTGTGAAGGAGCTACAGGCCGAGCAGGAGGACCG GATCACCCGGAAGTTCAGGCTGAATTCTGAAGGCAAACTTGAGCAGACGGTCTCCATGGCAACCACGACACAGCCAATGACTCAGCATCT TCACGTCACCTACAAGAAGGTGACCCCGTAAACCTAGAGCTTCTGGAGCCCTCGGGAGGGCCTGGCTACTGTGCCTCAACGGTTCGGCTC CTCAACAGACAGTCCCTGCGGCAGAAGTGGGTGTGGCCGTGAGCCTCTGCAGGCTCAAGAGTGTTGTCCAGATGTTTCTGTACTGGCATA >In-frame_ENST00000427183_ENST00000402136_TCGA-61-1918-01A_HDLBP_chr2_242174536_-_THAP4_chr2_242524140_length(amino acids)=1054AA_start in transcript=196_stop in transcript=3360 MHLAERDRWLFVATVMMHFVSIKSGFPGLCVGVRSTMSSVAVLTQESFAEHRSGLVPQQIKVATLNSEEESDPPTYKDAFPPLPEKAACL ESAQEPSGAWGNKIRPIKASVITQVFHVPLEERKYKDMNQFGEGEQAKICLEIMQRTGAHLELSLAKDQGLSIMVSGKLDAVMKARKDIV ARLQTQASATVAIPKEHHRFVIGKNGEKLQDLELKTATKIQIPRPDDPSNQIKITGTKEGIEKARHEVLLISAEQDKRAVERLEVEKAFH PFIAGPYNRLVGEIMQETGTRINIPPPSVNRTEIVFTGEKEQLAQAVARIKKIYEEKANSFTVSSVAAPSWLHRFIIGKKGQNLAKITQQ MPKVHIEFTEGEDKITLEGPTEDVNVAQEQIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSEKSNLIRI EGDPQGVQQAKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKSDIVQLRGPKNEVEKCTKYMQKM VADLVENSYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNSETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAK LHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLLHLAEEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKV RDSTGARVIFPAAEDKDQDLITIIGKEDAVREAQKELEALIQNLDNVVEDSMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGTQ SDKVTLKGAKDCVEAAKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPKGSRIQQITRDFSVQIKFPDREENAVHSTEPVVQENGDEAGE GREAKDCDPGSPRRCDIIIISGRKEKCEAAKEALEALVPVTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEVNIHVPAPELQSDIIAITGL -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for HDLBP-THAP4 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for HDLBP-THAP4 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for HDLBP-THAP4 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | HDLBP | C0004352 | Autistic Disorder | 1 | CTD_human |
Hgene | HDLBP | C2931817 | Chromosome 2q37 deletion syndrome | 1 | CTD_human |