|
Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:HERC4-CTNNA3 (FusionGDB2 ID:36043) |
Fusion Gene Summary for HERC4-CTNNA3 |
Fusion gene summary |
Fusion gene information | Fusion gene name: HERC4-CTNNA3 | Fusion gene ID: 36043 | Hgene | Tgene | Gene symbol | HERC4 | CTNNA3 | Gene ID | 26091 | 29119 |
Gene name | HECT and RLD domain containing E3 ubiquitin protein ligase 4 | catenin alpha 3 | |
Synonyms | - | ARVD13|VR22 | |
Cytomap | 10q21.3 | 10q21.3 | |
Type of gene | protein-coding | protein-coding | |
Description | probable E3 ubiquitin-protein ligase HERC4HECT domain and RCC1-like domain-containing protein 4HECT-type E3 ubiquitin transferase HERC4hect domain and RLD 4 | catenin alpha-3alpha-T-cateninalpha-catenin-like proteincatenin (cadherin-associated protein), alpha 3 | |
Modification date | 20200327 | 20200313 | |
UniProtAcc | Q5GLZ8 | Q9UI47 | |
Ensembl transtripts involved in fusion gene | ENST00000277817, ENST00000412272, ENST00000395198, ENST00000373700, ENST00000395187, ENST00000480158, ENST00000492996, | ENST00000433211, ENST00000373744, ENST00000545309, ENST00000373735, | |
Fusion gene scores | * DoF score | 12 X 13 X 6=936 | 23 X 20 X 6=2760 |
# samples | 15 | 25 | |
** MAII score | log2(15/936*10)=-2.64154602908752 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(25/2760*10)=-3.46466826700344 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: HERC4 [Title/Abstract] AND CTNNA3 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | HERC4(69749968)-CTNNA3(67680375), # samples:1 HERC4(69748420)-CTNNA3(67748555), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | HERC4-CTNNA3 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. HERC4-CTNNA3 seems lost the major protein functional domain in Tgene partner, which is a tumor suppressor due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene breakpoints across HERC4 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across CTNNA3 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | HNSC | TCGA-BB-7861-01A | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
ChimerDB4 | HNSC | TCGA-BB-7861-01A | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
Top |
Fusion Gene ORF analysis for HERC4-CTNNA3 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000277817 | ENST00000433211 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
Frame-shift | ENST00000277817 | ENST00000373744 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
5CDS-intron | ENST00000277817 | ENST00000545309 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
5CDS-5UTR | ENST00000277817 | ENST00000373735 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
Frame-shift | ENST00000412272 | ENST00000433211 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
In-frame | ENST00000412272 | ENST00000373744 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
5CDS-intron | ENST00000412272 | ENST00000545309 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
5CDS-5UTR | ENST00000412272 | ENST00000373735 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
Frame-shift | ENST00000395198 | ENST00000433211 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
In-frame | ENST00000395198 | ENST00000373744 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
5CDS-intron | ENST00000395198 | ENST00000545309 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
5CDS-5UTR | ENST00000395198 | ENST00000373735 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
Frame-shift | ENST00000373700 | ENST00000433211 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
In-frame | ENST00000373700 | ENST00000373744 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
5CDS-intron | ENST00000373700 | ENST00000545309 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
5CDS-5UTR | ENST00000373700 | ENST00000373735 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
3UTR-3CDS | ENST00000395187 | ENST00000433211 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
3UTR-3CDS | ENST00000395187 | ENST00000373744 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
3UTR-intron | ENST00000395187 | ENST00000545309 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
3UTR-5UTR | ENST00000395187 | ENST00000373735 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
intron-3CDS | ENST00000480158 | ENST00000433211 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
intron-3CDS | ENST00000480158 | ENST00000373744 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
intron-intron | ENST00000480158 | ENST00000545309 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
intron-5UTR | ENST00000480158 | ENST00000373735 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
intron-3CDS | ENST00000492996 | ENST00000433211 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
intron-3CDS | ENST00000492996 | ENST00000373744 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
intron-intron | ENST00000492996 | ENST00000545309 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
intron-5UTR | ENST00000492996 | ENST00000373735 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - |
Frame-shift | ENST00000277817 | ENST00000433211 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
Frame-shift | ENST00000277817 | ENST00000373744 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
5CDS-intron | ENST00000277817 | ENST00000545309 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
5CDS-5UTR | ENST00000277817 | ENST00000373735 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
In-frame | ENST00000412272 | ENST00000433211 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
In-frame | ENST00000412272 | ENST00000373744 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
5CDS-intron | ENST00000412272 | ENST00000545309 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
5CDS-5UTR | ENST00000412272 | ENST00000373735 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
In-frame | ENST00000395198 | ENST00000433211 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
In-frame | ENST00000395198 | ENST00000373744 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
5CDS-intron | ENST00000395198 | ENST00000545309 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
5CDS-5UTR | ENST00000395198 | ENST00000373735 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
In-frame | ENST00000373700 | ENST00000433211 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
In-frame | ENST00000373700 | ENST00000373744 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
5CDS-intron | ENST00000373700 | ENST00000545309 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
5CDS-5UTR | ENST00000373700 | ENST00000373735 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
3UTR-3CDS | ENST00000395187 | ENST00000433211 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
3UTR-3CDS | ENST00000395187 | ENST00000373744 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
3UTR-intron | ENST00000395187 | ENST00000545309 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
3UTR-5UTR | ENST00000395187 | ENST00000373735 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
intron-3CDS | ENST00000480158 | ENST00000433211 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
intron-3CDS | ENST00000480158 | ENST00000373744 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
intron-intron | ENST00000480158 | ENST00000545309 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
intron-5UTR | ENST00000480158 | ENST00000373735 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
intron-3CDS | ENST00000492996 | ENST00000433211 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
intron-3CDS | ENST00000492996 | ENST00000373744 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
intron-intron | ENST00000492996 | ENST00000545309 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
intron-5UTR | ENST00000492996 | ENST00000373735 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000277817 | HERC4 | chr10 | 69749968 | - | ENST00000433211 | CTNNA3 | chr10 | 67680375 | - | 9898 | 1798 | 495 | 1976 | 493 |
ENST00000412272 | HERC4 | chr10 | 69749968 | - | ENST00000373744 | CTNNA3 | chr10 | 67680375 | - | 2480 | 1881 | 248 | 2059 | 603 |
ENST00000395198 | HERC4 | chr10 | 69749968 | - | ENST00000373744 | CTNNA3 | chr10 | 67680375 | - | 2480 | 1881 | 248 | 2059 | 603 |
ENST00000373700 | HERC4 | chr10 | 69749968 | - | ENST00000373744 | CTNNA3 | chr10 | 67680375 | - | 2545 | 1946 | 313 | 2124 | 603 |
ENST00000412272 | HERC4 | chr10 | 69748420 | - | ENST00000433211 | CTNNA3 | chr10 | 67748555 | - | 10395 | 2054 | 248 | 2083 | 611 |
ENST00000412272 | HERC4 | chr10 | 69748420 | - | ENST00000373744 | CTNNA3 | chr10 | 67748555 | - | 2894 | 2054 | 248 | 2083 | 611 |
ENST00000395198 | HERC4 | chr10 | 69748420 | - | ENST00000433211 | CTNNA3 | chr10 | 67748555 | - | 10395 | 2054 | 248 | 2083 | 611 |
ENST00000395198 | HERC4 | chr10 | 69748420 | - | ENST00000373744 | CTNNA3 | chr10 | 67748555 | - | 2894 | 2054 | 248 | 2083 | 611 |
ENST00000373700 | HERC4 | chr10 | 69748420 | - | ENST00000433211 | CTNNA3 | chr10 | 67748555 | - | 10460 | 2119 | 313 | 2148 | 611 |
ENST00000373700 | HERC4 | chr10 | 69748420 | - | ENST00000373744 | CTNNA3 | chr10 | 67748555 | - | 2959 | 2119 | 313 | 2148 | 611 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000277817 | ENST00000433211 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - | 0.000196923 | 0.9998031 |
ENST00000412272 | ENST00000373744 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - | 0.00012868 | 0.99987125 |
ENST00000395198 | ENST00000373744 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - | 0.00012868 | 0.99987125 |
ENST00000373700 | ENST00000373744 | HERC4 | chr10 | 69749968 | - | CTNNA3 | chr10 | 67680375 | - | 0.000133939 | 0.999866 |
ENST00000412272 | ENST00000433211 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - | 8.11E-05 | 0.99991894 |
ENST00000412272 | ENST00000373744 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - | 0.000246491 | 0.99975353 |
ENST00000395198 | ENST00000433211 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - | 8.11E-05 | 0.99991894 |
ENST00000395198 | ENST00000373744 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - | 0.000246491 | 0.99975353 |
ENST00000373700 | ENST00000433211 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - | 8.22E-05 | 0.99991775 |
ENST00000373700 | ENST00000373744 | HERC4 | chr10 | 69748420 | - | CTNNA3 | chr10 | 67748555 | - | 0.000242291 | 0.9997577 |
Top |
Fusion Genomic Features for HERC4-CTNNA3 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
Top |
Fusion Protein Features for HERC4-CTNNA3 |
Go to FGviewer for the breakpoints of chr10:69749968-chr10:67680375 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
HERC4 | CTNNA3 |
FUNCTION: Probable E3 ubiquitin-protein ligase involved in either protein trafficking or in the distribution of cellular structures. Required for spermatozoon maturation and fertility, and for the removal of the cytoplasmic droplet of the spermatozoon. E3 ubiquitin-protein ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfer it to targeted substrates. {ECO:0000250|UniProtKB:Q6PAV2}. | FUNCTION: May be involved in formation of stretch-resistant cell-cell adhesion complexes. {ECO:0000303|PubMed:11590244}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000395187 | - | 14 | 24 | 730_1057 | 548.6666666666666 | 123.66666666666667 | Domain | HECT |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000395187 | - | 13 | 24 | 730_1057 | 491.0 | 123.66666666666667 | Domain | HECT |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000277817 | - | 12 | 23 | 102_154 | 492.0 | 948.0 | Repeat | Note=RCC1 3 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000277817 | - | 12 | 23 | 156_207 | 492.0 | 948.0 | Repeat | Note=RCC1 4 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000277817 | - | 12 | 23 | 1_51 | 492.0 | 948.0 | Repeat | Note=RCC1 1 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000277817 | - | 12 | 23 | 208_259 | 492.0 | 948.0 | Repeat | Note=RCC1 5 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000277817 | - | 12 | 23 | 261_311 | 492.0 | 948.0 | Repeat | Note=RCC1 6 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000277817 | - | 12 | 23 | 313_368 | 492.0 | 948.0 | Repeat | Note=RCC1 7 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000277817 | - | 12 | 23 | 52_101 | 492.0 | 948.0 | Repeat | Note=RCC1 2 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000373700 | - | 15 | 25 | 102_154 | 602.0 | 1050.0 | Repeat | Note=RCC1 3 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000373700 | - | 15 | 25 | 156_207 | 602.0 | 1050.0 | Repeat | Note=RCC1 4 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000373700 | - | 15 | 25 | 1_51 | 602.0 | 1050.0 | Repeat | Note=RCC1 1 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000373700 | - | 15 | 25 | 208_259 | 602.0 | 1050.0 | Repeat | Note=RCC1 5 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000373700 | - | 15 | 25 | 261_311 | 602.0 | 1050.0 | Repeat | Note=RCC1 6 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000373700 | - | 15 | 25 | 313_368 | 602.0 | 1050.0 | Repeat | Note=RCC1 7 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000373700 | - | 15 | 25 | 52_101 | 602.0 | 1050.0 | Repeat | Note=RCC1 2 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000395187 | - | 14 | 24 | 102_154 | 548.6666666666666 | 123.66666666666667 | Repeat | Note=RCC1 3 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000395187 | - | 14 | 24 | 156_207 | 548.6666666666666 | 123.66666666666667 | Repeat | Note=RCC1 4 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000395187 | - | 14 | 24 | 1_51 | 548.6666666666666 | 123.66666666666667 | Repeat | Note=RCC1 1 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000395187 | - | 14 | 24 | 208_259 | 548.6666666666666 | 123.66666666666667 | Repeat | Note=RCC1 5 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000395187 | - | 14 | 24 | 261_311 | 548.6666666666666 | 123.66666666666667 | Repeat | Note=RCC1 6 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000395187 | - | 14 | 24 | 313_368 | 548.6666666666666 | 123.66666666666667 | Repeat | Note=RCC1 7 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000395187 | - | 14 | 24 | 52_101 | 548.6666666666666 | 123.66666666666667 | Repeat | Note=RCC1 2 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000395198 | - | 15 | 26 | 102_154 | 602.0 | 1058.0 | Repeat | Note=RCC1 3 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000395198 | - | 15 | 26 | 156_207 | 602.0 | 1058.0 | Repeat | Note=RCC1 4 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000395198 | - | 15 | 26 | 1_51 | 602.0 | 1058.0 | Repeat | Note=RCC1 1 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000395198 | - | 15 | 26 | 208_259 | 602.0 | 1058.0 | Repeat | Note=RCC1 5 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000395198 | - | 15 | 26 | 261_311 | 602.0 | 1058.0 | Repeat | Note=RCC1 6 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000395198 | - | 15 | 26 | 313_368 | 602.0 | 1058.0 | Repeat | Note=RCC1 7 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000395198 | - | 15 | 26 | 52_101 | 602.0 | 1058.0 | Repeat | Note=RCC1 2 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000412272 | - | 15 | 24 | 102_154 | 602.0 | 980.0 | Repeat | Note=RCC1 3 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000412272 | - | 15 | 24 | 156_207 | 602.0 | 980.0 | Repeat | Note=RCC1 4 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000412272 | - | 15 | 24 | 1_51 | 602.0 | 980.0 | Repeat | Note=RCC1 1 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000412272 | - | 15 | 24 | 208_259 | 602.0 | 980.0 | Repeat | Note=RCC1 5 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000412272 | - | 15 | 24 | 261_311 | 602.0 | 980.0 | Repeat | Note=RCC1 6 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000412272 | - | 15 | 24 | 313_368 | 602.0 | 980.0 | Repeat | Note=RCC1 7 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000412272 | - | 15 | 24 | 52_101 | 602.0 | 980.0 | Repeat | Note=RCC1 2 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000277817 | - | 11 | 23 | 102_154 | 434.3333333333333 | 948.0 | Repeat | Note=RCC1 3 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000277817 | - | 11 | 23 | 156_207 | 434.3333333333333 | 948.0 | Repeat | Note=RCC1 4 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000277817 | - | 11 | 23 | 1_51 | 434.3333333333333 | 948.0 | Repeat | Note=RCC1 1 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000277817 | - | 11 | 23 | 208_259 | 434.3333333333333 | 948.0 | Repeat | Note=RCC1 5 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000277817 | - | 11 | 23 | 261_311 | 434.3333333333333 | 948.0 | Repeat | Note=RCC1 6 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000277817 | - | 11 | 23 | 313_368 | 434.3333333333333 | 948.0 | Repeat | Note=RCC1 7 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000277817 | - | 11 | 23 | 52_101 | 434.3333333333333 | 948.0 | Repeat | Note=RCC1 2 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000373700 | - | 14 | 25 | 102_154 | 544.3333333333334 | 1050.0 | Repeat | Note=RCC1 3 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000373700 | - | 14 | 25 | 156_207 | 544.3333333333334 | 1050.0 | Repeat | Note=RCC1 4 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000373700 | - | 14 | 25 | 1_51 | 544.3333333333334 | 1050.0 | Repeat | Note=RCC1 1 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000373700 | - | 14 | 25 | 208_259 | 544.3333333333334 | 1050.0 | Repeat | Note=RCC1 5 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000373700 | - | 14 | 25 | 261_311 | 544.3333333333334 | 1050.0 | Repeat | Note=RCC1 6 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000373700 | - | 14 | 25 | 313_368 | 544.3333333333334 | 1050.0 | Repeat | Note=RCC1 7 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000373700 | - | 14 | 25 | 52_101 | 544.3333333333334 | 1050.0 | Repeat | Note=RCC1 2 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000395187 | - | 13 | 24 | 102_154 | 491.0 | 123.66666666666667 | Repeat | Note=RCC1 3 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000395187 | - | 13 | 24 | 156_207 | 491.0 | 123.66666666666667 | Repeat | Note=RCC1 4 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000395187 | - | 13 | 24 | 1_51 | 491.0 | 123.66666666666667 | Repeat | Note=RCC1 1 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000395187 | - | 13 | 24 | 208_259 | 491.0 | 123.66666666666667 | Repeat | Note=RCC1 5 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000395187 | - | 13 | 24 | 261_311 | 491.0 | 123.66666666666667 | Repeat | Note=RCC1 6 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000395187 | - | 13 | 24 | 313_368 | 491.0 | 123.66666666666667 | Repeat | Note=RCC1 7 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000395187 | - | 13 | 24 | 52_101 | 491.0 | 123.66666666666667 | Repeat | Note=RCC1 2 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000395198 | - | 14 | 26 | 102_154 | 544.3333333333334 | 1058.0 | Repeat | Note=RCC1 3 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000395198 | - | 14 | 26 | 156_207 | 544.3333333333334 | 1058.0 | Repeat | Note=RCC1 4 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000395198 | - | 14 | 26 | 1_51 | 544.3333333333334 | 1058.0 | Repeat | Note=RCC1 1 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000395198 | - | 14 | 26 | 208_259 | 544.3333333333334 | 1058.0 | Repeat | Note=RCC1 5 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000395198 | - | 14 | 26 | 261_311 | 544.3333333333334 | 1058.0 | Repeat | Note=RCC1 6 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000395198 | - | 14 | 26 | 313_368 | 544.3333333333334 | 1058.0 | Repeat | Note=RCC1 7 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000395198 | - | 14 | 26 | 52_101 | 544.3333333333334 | 1058.0 | Repeat | Note=RCC1 2 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000412272 | - | 14 | 24 | 102_154 | 544.3333333333334 | 980.0 | Repeat | Note=RCC1 3 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000412272 | - | 14 | 24 | 156_207 | 544.3333333333334 | 980.0 | Repeat | Note=RCC1 4 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000412272 | - | 14 | 24 | 1_51 | 544.3333333333334 | 980.0 | Repeat | Note=RCC1 1 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000412272 | - | 14 | 24 | 208_259 | 544.3333333333334 | 980.0 | Repeat | Note=RCC1 5 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000412272 | - | 14 | 24 | 261_311 | 544.3333333333334 | 980.0 | Repeat | Note=RCC1 6 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000412272 | - | 14 | 24 | 313_368 | 544.3333333333334 | 980.0 | Repeat | Note=RCC1 7 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000412272 | - | 14 | 24 | 52_101 | 544.3333333333334 | 980.0 | Repeat | Note=RCC1 2 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000277817 | - | 12 | 23 | 730_1057 | 492.0 | 948.0 | Domain | HECT |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000373700 | - | 15 | 25 | 730_1057 | 602.0 | 1050.0 | Domain | HECT |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000395198 | - | 15 | 26 | 730_1057 | 602.0 | 1058.0 | Domain | HECT |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000412272 | - | 15 | 24 | 730_1057 | 602.0 | 980.0 | Domain | HECT |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000492996 | - | 1 | 4 | 730_1057 | 0 | 111.0 | Domain | HECT |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000277817 | - | 11 | 23 | 730_1057 | 434.3333333333333 | 948.0 | Domain | HECT |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000373700 | - | 14 | 25 | 730_1057 | 544.3333333333334 | 1050.0 | Domain | HECT |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000395198 | - | 14 | 26 | 730_1057 | 544.3333333333334 | 1058.0 | Domain | HECT |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000412272 | - | 14 | 24 | 730_1057 | 544.3333333333334 | 980.0 | Domain | HECT |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000492996 | - | 1 | 4 | 730_1057 | 0 | 111.0 | Domain | HECT |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000492996 | - | 1 | 4 | 102_154 | 0 | 111.0 | Repeat | Note=RCC1 3 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000492996 | - | 1 | 4 | 156_207 | 0 | 111.0 | Repeat | Note=RCC1 4 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000492996 | - | 1 | 4 | 1_51 | 0 | 111.0 | Repeat | Note=RCC1 1 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000492996 | - | 1 | 4 | 208_259 | 0 | 111.0 | Repeat | Note=RCC1 5 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000492996 | - | 1 | 4 | 261_311 | 0 | 111.0 | Repeat | Note=RCC1 6 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000492996 | - | 1 | 4 | 313_368 | 0 | 111.0 | Repeat | Note=RCC1 7 |
Hgene | HERC4 | chr10:69748420 | chr10:67748555 | ENST00000492996 | - | 1 | 4 | 52_101 | 0 | 111.0 | Repeat | Note=RCC1 2 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000492996 | - | 1 | 4 | 102_154 | 0 | 111.0 | Repeat | Note=RCC1 3 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000492996 | - | 1 | 4 | 156_207 | 0 | 111.0 | Repeat | Note=RCC1 4 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000492996 | - | 1 | 4 | 1_51 | 0 | 111.0 | Repeat | Note=RCC1 1 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000492996 | - | 1 | 4 | 208_259 | 0 | 111.0 | Repeat | Note=RCC1 5 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000492996 | - | 1 | 4 | 261_311 | 0 | 111.0 | Repeat | Note=RCC1 6 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000492996 | - | 1 | 4 | 313_368 | 0 | 111.0 | Repeat | Note=RCC1 7 |
Hgene | HERC4 | chr10:69749968 | chr10:67680375 | ENST00000492996 | - | 1 | 4 | 52_101 | 0 | 111.0 | Repeat | Note=RCC1 2 |
Tgene | CTNNA3 | chr10:69748420 | chr10:67748555 | ENST00000373744 | 13 | 17 | 325_379 | 719.6666666666666 | 896.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CTNNA3 | chr10:69748420 | chr10:67748555 | ENST00000373744 | 13 | 17 | 74_111 | 719.6666666666666 | 896.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CTNNA3 | chr10:69748420 | chr10:67748555 | ENST00000433211 | 14 | 18 | 325_379 | 719.6666666666666 | 896.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CTNNA3 | chr10:69748420 | chr10:67748555 | ENST00000433211 | 14 | 18 | 74_111 | 719.6666666666666 | 896.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CTNNA3 | chr10:69749968 | chr10:67680375 | ENST00000373744 | 15 | 17 | 325_379 | 800.0 | 896.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CTNNA3 | chr10:69749968 | chr10:67680375 | ENST00000373744 | 15 | 17 | 74_111 | 800.0 | 896.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CTNNA3 | chr10:69749968 | chr10:67680375 | ENST00000433211 | 16 | 18 | 325_379 | 800.0 | 896.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CTNNA3 | chr10:69749968 | chr10:67680375 | ENST00000433211 | 16 | 18 | 74_111 | 800.0 | 896.0 | Coiled coil | Ontology_term=ECO:0000255 |
Top |
Fusion Gene Sequence for HERC4-CTNNA3 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000277817_ENST00000433211_TCGA-BB-7861-01A_HERC4_chr10_69749968_-_CTNNA3_chr10_67680375_length(transcript)=9898nt_BP=1798nt GTGGTTAGTAGCGATAAATGCTCTGAAGGAAAAAACATACAGTACTGTGAGAATGTAGTATTTTGAAATGTTTCATTTGCAAAATTGTAC TTGATACTCAGAATAGTGTTTTTTTTTCCTAAAATACTTAATATGCTGAACAGGTCAATGTATCATCTGCCTAGTATGCATAAACAATAA CAGTAAATGTTTAGTAATTTGAGCACAGTTGGGTATGTTCATGTATTTTTTATTCCTTACTCTGTTTGCATTGCCAGTGTTTGATTTTGC TATTTCAAAGAAATGGCATTTTGTTGAGTTTGAAAATTTGAAGGTGCATTGGATCCTGCTAATTTGTTGGATTCTGCTAAATTGTAGCAG TACAGCTCTCAGGTTTTGTAGTTAAGAGCATAACTTCACTAAATAAAAATATTTTTAATACAATAATATGGAATCAGAGTAACTCTCCTT TTTCCTGCTCAAACTTTGATTTGCTGAAGCTGCTTCCCGAAAATCATGTGTGTCGACTCTCTGGTCAGAATTTGCTCCGGACTCTCTTAT GGCAGAATCAGAAATATTAAAAGTTTGTCAGATATCCAGATTGTACAGGTTGCTTGTGGTTACTATCATTCACTTGCACTTTCTAAAGCA AGTGAAGTCTTCTGTTGGGGACAGAATAAATATGGCCAATTGGGTTTAGGTACTGACTGTAAAAAGCAAACTTCACCGCAGCTGCTTAAG TCTTTGCTTGGAATCCCTTTCATGCAAGTTGCAGCAGGAGGAGCCCATAGTTTTGTACTCACCCTTTCTGGAGCTATCTTTGGATGGGGA CGCAACAAGTTTGGTCAGCTAGGTCTTAATGATGAAAATGATAGGTATGTTCCTAATTTACTAAAGTCACTAAGATCTCAGAAAATAGTT TATATTTGTTGTGGAGAAGATCATACTGCTGCTCTAACCAAGGAAGGTGGAGTGTTTACTTTTGGAGCTGGAGGGTATGGTCAGTTGGGC CATAATTCTACCAGTCATGAAATAAACCCAAGGAAAGTTTTTGAACTTATGGGAAGCATTGTCACTGAGATTGCTTGTGGACGGCAGCAC ACTTCTGCTTTTGTTCCTTCATCAGGACGAATTTACTCTTTTGGGCTTGGTGGTAATGGGCAGCTGGGAACCGGTTCAACAAGCAACAGG AAAAGCCCCTTTACTGTAAAAGGAAATTGGTACCCCTATAATGGGCAGTGTCTACCAGATATTGATTCTGAAGAATATTTCTGTGTAAAA AGAATTTTCTCAGGGGGAGATCAAAGCTTTTCACATTACTCTAGTCCCCAGAACTGTGGGCCACCAGATGACTTCAGATGTCCCAATCCG ACAAAGCAGATCTGGACAGTGAATGAAGCTCTAATTCAGAAATGGCTGAGCTATCCTTCTGGAAGGTTTCCTGTGGAGATAGCCAATGAG ATAGATGGAACGTTTTCTTCCTCTGGTTGCCTAAATGGAAGTTTTTTAGCTGTTAGCAATGATGATCACTATAGAACAGGTACCAGATTT TCAGGGGTTGATATGAATGCTGCTAGGCTTTTATTCCACAAACTTATACAACCTGATCATCCGCAGATATCTCAGCAGGTGGCAGCTAGT TTGGAAAAGAATCTTATTCCTAAACTGACTAGCTCCTTACCTGATGTTGAAGCATTGAGGTTTTATCTTACTCTACCAGAATGTCCCCTG ATGAGTGATTCCAACAATTTCACAACAATAGCAATTCCCTTTGGTACAGCTCTTGTGAACCTAGAAAAGGCACCACTGAAAGTACTTGTT GGACAGTGTCACATCCCTGATCCAAGCAGCCAAAAATTTAATGAATGCTGTAGTGCAAACAGTGAAAATGTCTTACATTGCCTCAACCAA GATCATCCGAATCCAGAGTCCTGCTGGGCCCCGGCACCCAGTTGTGATGTGGAGAATGAAGGCTCCTGCAAAAAAACCCTTGATTAAAAG AGAGAAGCCAGAGGAAACGTGTGCAGCTGTCAGACGAGGCTCAGCAAAGAAAAAAATCCATCCATTGCAAGTCATGAGTGAATTTAGAGG AAGACAAATCTACTGAAACCACTATTCTACATATAGTGCCTATATGACAAAATCCTGCCTAACCACACTGCTTTATTTTACACTTAAGAA GTTCTGTAATTTCACTAAGTTTTGGTGTTTAACTCACAAATAACATAAAATATTGGGCGCTAAATCAACAAAAGCAATATATATTTGGGA TCATATCACTGTCATTTCTGTATGGTCAGCACCTAATAGTTAAGGAATATTTGCTTGTTGAATGAATGAAATTATCACGTGTCATTCAGC GTTTCCCATCATAGAGATTATCTACTATTCGTTACCAAATAAACACAGGAGAGGCCAGAGAGTCCTGTTTATCTGTAATACTTCATGTAC ACTTATCATCCTTATCTTGAATTAAAACACTAACATGAGCTCCTAACTTGGTTTTTTAATAGAAACAAAAGACTTTTATAAAATATTTTC CCATTTAATCTCCATGCTTTCTTTATCTGATCTAACCTGGCACCTAACCAGGCAGAAATGTATGATTCCTGCCATAGCAAAAAAACCACC TTTTAATCTCTAGATAGCTGTACTCATTGTCAACTTATTAGGCTAATATCCATTATAAACTAATCAAATTTGAATAGTTAGGCTACTTGC TGGATTTTGAAGGTCAACCTTGTTTATTAATAAAATGCTTTCTTAACATTATAAAGGTTACAATGAGTTCTGATGCCACATACTCACCTT TTGGGTTTCCAATGTGTTAGAGAGTTCTGTACTTTTGAGTGTTAGGCCTATCCGAATACATATGTGAAAGAAGAGTTATCACCCATTGGG AAAATGAGACAACAAACTATATCCCAAAGTGAGTTATATTAATAATAACAGAAGTGTAAGTTCTGTATGACCCTATTTTTACAAACATAA AAATACATTTTTATCAGCTTGCAATTGTAATTAAAAGGAAAATGGCAGTTTGAAAAATCTTTTGACGTTGAGTAAAATATAACTGCATGA ACTGTACCATTGAACTATGAAGCAGTTAATGGCAATGAAGCTGGAGTGATTTTAATAACGTTCTTTTAAATAAAAGTCACTGGGGTCATT TTACAACTCCAGTCACTGTGTTCATTCCTAGTTGAGTTCATAATGGACTTCATAATAGTCTTAGAGTCTAGTGTACCTCTCTCTGTCATT CTCTCTCTCTTTTTCTCTCCCCTGATGACCTGCCTCTCTCTGTCTTTCAAAAATGTCCTTAACAGAAACTCTTTGGAGGCCATAAGTTTT GTTTTCATTTTTTCTCATTCATAGAGTTCTGATTCACAGACTTTAAAAAACATTTTCTATTCTACATTATCATAATAGTATTATATTGTA CCTTTTTACTTCTAAAACATTGCCATTGATGAGAGGCGTCTCAGCAACGATGTAACCTTAGATTGATGAGAAAAAAATTTACACATACAA TACCAGTTGATATTAGGAGAACCAGTTTGGGTAAAAGGATGCATGAAACATAGAAAAGCATAAAGATTGACAGTACGATATGTGTGGAAT CTTAAGCATAATGGTATGGGAAAAGAAGGATCTATTTAATAGGTCATTATTAATTATGCAGGAAATGTTAAATTTCTTGTAATGAATTAT TTCAATCTTCCAAGTAGCTGGATTGCCTGAGCTCAGTGTAAAACTTCCTAGGAGGTGAAGGCAATAAACTCCTCCCTGTTTTGCACCATA GACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAGAAGAAAAGGCAGTGAAGAAGGGAATTAGGGAATTCAGATGACTCTGT TTTTCAGAATTATCTAGATGATTGAGGCAAATAGAGATTTTCTTTTATTGAAATGCTGCCATCATTTTCTGCTCTAAGTGTAGATGTTGC ACGAGTGACATCTGTGGTATATCCTTCTTCCAGATAGAAGTATAAATTTATAATTTAGTGGGGAGAGGAATTTTCTTTTAATCACCAAAC TACCAGCTGTATAGAAAATTTTTTTGAAATCACCAAACTAGCAGTTGTGTATCTTAGCTCCTAAAGCCACATTCACAAGAATCATAAGCA TCTCATTTAGAAAATCTAATGTCCACCGGACCCAACATCATCTTTCCACATGTTGGAGTTTAGAACATGCAGTATTGGACACCAAAAGAA CAGAAATAACTTGAAATTATACAATTACCAAATAACCTCCATCTCTTTGATAAAAATGACTTTTTACCCAAAGTGAGATGTGAACAAGTT CTCCTCTTTAACCCAGGCAGATTTTCAGCTTAGCTCAAAGCAAACTATAATTAAATAAAACAATAAAAATTTTAACTCAATGAATATCCT AGGAGTTAATCTGCTGTGGTAATCGATAGTGACATAAAAACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTG TAGTAGGCAGCATTTCAAGATTTAGTTTGATTCAAACCTGCTGATAAAACAAATGCTTATATGCAAGAAAAACTAGCAGCAAGATATGAA TAAATCTCCCCATTATGTTAAAAACTAATCAGCATGACACATTTATATTTAGGTATTTCTTCTGCAGAGGATTGCCAGAAATTTCTTAAT GAGAGTGATAATTTGGTGATCCACCTATGTACCTTTTGATGTCTCATCACAGAGATTAGTGCTTCCTCTGATAATACATTTGCTTGATCC TGCTAATAAGAACTCACCTTTCTTTTTAACGAAATCAATTTGTGTTAATTTACATAGGGAAAAACGTTCCTTGAGAGGGAGGAGAGGGGT GTTTACCACCCACAGGAGCAGTTCCATCCCTGGTTACCCACCAGTATCCCTGCCAGATGTTAGACTGGAATTAGAATGAAAATTTAAAAA AAAACGAAATAATAATCCACTAAATGGCCTTCTAATTAGAGAAATTTGAAGATTTCTATCAAATATAAAAAGTGAGAAATAGAAATCATT CCCTTTAATTTATGACAAATTAAAATTATTGAAGTAAAATGTTTCTAAGTCAGTTTCTGGATAGTTCTTGAATGAGTCAAGAAAAAACTC AAACACTAAATTTCTAAGCTAATTTGTTCATTATTCCTTTCTGTTTATTATTTATTATATGAGTGCAAATTGCAAATGTATTAGAAAAGA CAATATAGCCTTCACATTCACAAGTGTGCCTTCTGGCCTTTGAAATCTTTTAACATAAGATCAATATAACATATTTGTTCCCCATAAAAA TCTCTTATGTACAGGGAATAAGGTCCTCCATAGCTACACAGAGACACCCATTCTTGCAGTCTGGCATTCTTAACACCTTTAGCTTCAAAG GCAGTCGGTTTCAATTTCAAGCTAAAATTGTGAATATACAATTAAGTGCGCAACTTGGGCCTTCAGACCAAATAATTAATGCTCCTCAAA TTAAATAATGAGTGGCTGAAAAGCCTAATGTGTAACAACAGAGTAAGTGACTTCAACGGCTTCCTGAACCTTCATTTTGAGGGTGTTCTC ATCTCACCCACCTCTGGGCTAGGTATCCTCTGTTAATTGCTAACAATTTCCTACCAAAATAGTGCAATCAGGACTGCCCATCACAGCAAA TTACTCCAATTAATGCCCTTTCCTCTTCTGTGAACCAAAAATATCTCTCTCCTGTCTCTCATCTCTATCCCAGGTATAAATTGACTAATA AATTTTACAGAGTTTTAGTCAAAATTATGAATTTTAATTTCCAGCAACATTATTCCTTTAGTCTTTCTATTCCCCAAAACATTCTTAAAT TTTGGTATCAAATGTTCATTTCTGTCCTAGAGATTGTGGTTCCCATGGCTACAGATTTTTGTATAGTGGTAGTATGAGTGGAATAAGATC TGAGACTTTTCCTGGTGATATCCACCATTCTCTTGTGAACTCATTGCAGAATAAACAGCCTCTTTCACTTTCATTGTAAGTAGTTCTTTA GGTTGGCAAAGCAGGCACCAGAATCTGAATTTGAATGAAATCTGTACTTTCTTTTGTTGGCCTATTTTTTGCCAAGACAGCCTGCCTATT GTATATTTAGGAATCAAATATTCATTTTTTCTGTTTGTAAAGCCAGAAATATTTCAGTTAAAAAGAATATAATTTTATATTATTTTAATA ATTCTTTTTAAGTAAAGTAGGAAAATTTCTGCCACCTGAGATGTTACTGTTTTTATTTATATGAAAATTCCATTTTTTTCTTTATGACTC TTTTCCCATACCATTATGATATGTTCAGCATTAGTATTTTCCATTTTACCACTAAACAAATAAGCCAGGACTAATAACAATAGCAGTTTG AGAGTTTTTATTTTGGCATTTTGGTTTTAATTAGGAAAGAAAACATGGATGCTATTAAAACTAGTTGTAGTTAAAAATGTTTTGAATGAG GCTACTAACGCTATCTTAGTCATCTCAAAGAGAAAGAGAAGAAGTAAAATTTTAAATACCTTTTTGGCATTTTTAACCAATTCATATGAA CAAAAACATATATTCTATTAAAGCAAAATAAAGAATAGTTTAAAACACTAGTCTTCTTGCATGTGAATATTTTCCCCCTAACAGACAAGA TAGAATCCATTTCTGGACACTCTAAAAGAAAGTAATGTTAATTGAGAGAGCTGTCTCCAAATGGAACTCAACCTGACCAGAATCCCATCC GCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGACGAGATGCTTTATGGCTGCTGGCTGCATTATGGCATCTAGCA GTCCCCACTGGTTTGTGGGAACAAAACACATGGATTGATATTCAATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAG TCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGGGGTAGTTGCAGAAGCATTTAGCTTTCATAGATGAGGG GAGAGTTTTTTGGTTTTATGAAGATTAGGCAGCCCTCCTGAGGAAAGTATTAAGGATAGAATGAGACACTTGTCTTGGTGGTTTGGTGAA GTCGTGTCGAAGGCAAAAGGATGAACTACACATATTTTGAGCATGATTTAGTAATATTGTTTGCAAGTTGAGAAACAGAAATTCAGCCAT TCTCCTGACTGATGGTAGGTGAAATTCTTCCCAATATTAGAGCCAATCTGGGTTACCATACGTTCATATATTTAACAGCTATTTGTTAAA CAACTGTGATGTTCCAGGCACTGTTCTAGGTTCTTAGGATACACCATATAACAAAACAAATAGTGATCCTTGCCCTCATGTGCCAGCTCT GTGTTAAATGCTAACTATTATCTTATTCAATCCTCCAAATAACCCTATAGGATATATATCATTCCACAGACAAGGAAGCTGAGGGTTAAA TGGGATAAGAATCTTGCTCAAAGTCTCACTGGCTTTAAAATATTAATATATATTTTACATCATTCAAGACAGATATATAATTAGCTGAAT ATTCTCACCTCTATTAACTGAATGTAGAGTGTCAGGTACATGGGAAGTAAGTTATTTACGTGATCTGAAATAAGAGGACAACCTTTGCCA AATTACTTTTATTACCATGGAGAAGAAAGCTTCAATGAAATGCCTGTTTCAGCCCATCTTCAGTATTGGTTGGTTAATACCATTTGTTAA CACCAATCCTTTCCTCTTTTACTGCTAACATGTGACTGTGTTTAAAATTATAGATTGCAGCAGAGTGTTGGCCAAGGATTATTGTAGTAG GATAAAGTTTCCCTGTATTTGAAATTTACCCAAACTGTAGCAAATACATCTTTCCTTCTTTATGGAGGTCACACGTGTGCATAGTATGTG CCTGAATACAGGTAAACTTTGTGTTTTAAAATTACATGGCCTTTTTTAGAGTCGACTGAAGGCTAGACTCTTCTTGCCCATGTTGCTGGA TAGGCTTTCAAATCTCAGGCCTTGGAGAGTTAAATGACTTTCTGATATTTCTTACGGTGGAGCCACATAAGAAATACACACATTCCTAGT TTGAGCAATGGATGTGTATATTGGGGATCTTCACTTTTATGTATCTGGTAGTCATGATGGTGCCTATTCCCAACTGTAGGAAAGGAAAGC CCTCAAGGAGAAAATTCTCTTTCAAAAAGGCTCAGATTTCTAACAATTATGTCTAAATGTTTCTTCAATTTAGAACATGTACAAAAGCTA CTTAATATTAGCAGAGTAGTTCTTGTGTTTTCATTTCAAATGAAATATTCCCAGTTCCAAAGTTTATTTCCTTGGCATTTTCAAGAAGGA TGGTTATTTTTAGTTCTGGTTATTTGGTGTTGGAGGTCTGTGACACTTCCTTATACATTTAAAGCCCCCTTTGAATAGTTGTATCAATAG TTCAAAAGCCTGTAGATATCTTGCTTTTCTATTCTGACAGCCCAGCTTCTGCAGACTCAGGCCAACCTTAGGTATGTCACATCAGTTCCC CATCTGTGTAAATTACCTGAACCTCTCTGTGGTATTCACTGAGAGTTGAGCTTCTACTAAGGGATTTCCTTGACCTGGGCTTTTAACACC AGATTTGTAGTGGAGTGTTTATTAGTAAAGCAAAGGAGTAAGTCAGAGATGCTAGCCCCTGCTCTCAGTTAAACAGAACTATCCTCCTTC CTGAATATTTAAACATAAAATTAATTTTAAACTACTATAAAAATCATGTTCCATTGCTTGCCAAATCTTATACCATTATAATGCTGTATT TTTACATGTTAGTATACATTGTGTCCATAGGGATATAAATATGAGAATTTCAGCAACTGTCTTGCAGGGTTAAGATGTGCTATTTGTTGA TTTTGCAAATTTTTCTCATGTGGTACAGTCCCTCCAAAGAAAATTTCCTTAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCG TGACTAACAAGTTCCTGAAAACAGAAGTAGACATATTTTATGCCCAATTTAGTACCTAATAATTGAGGCTTAAAACAAAATTTTCTTGGG CAAGTTGGGTGATTAAATATGAATTAAAACTTCTAGAGAAAGATTTCCAGATGCCCCTGTTTTCCATTTTGATTATGGTTTTAGTTTCAT AGCAACTTGGGGGAAAAAAATCATTTACTTTATGTCGTATTACAACAACAACTTTGACAGCTTAAATGTAGTGACCTCTCTGAAGGTAAT ATGCACATTATAATTTAGGATGAAAGCAGATTTAAACTAAGACTTTCTGAGATGAAATAAAAGTAACCAATTCATAATAGTCATGTTTAT TGCAGCAATATCTTGGGAACTTAAGTTTAGTGGCGTTTGAGGTGTTTCTGACTATCTTGCTTGTTCATTTCACCCTGCTCTGCAGAGACA GAATATGATTGAATGAACTGCCCATTATATTAATGACCAGTTCAAAGCAGTTTTGTGCTTTGGCTATAGATAAAATTTGGCAAAAATACT GTAGGCCTTTCTGGTCCATATTTATCCTTAAAGTATTTTTGCCAATCAATAAAAATGAAATATTTATCCAGAAATAGAAAAAGCTCTTTC CTATGACATTGACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAACTGAATCAATGATTTTTTTTAGTTG TGCTCTTAATTGCATTATTTCACATATGTAACACTGGGTTTGTTTTGGTTATATAGTATTATTTTACTTTATTCTAATTTCAACTCATGT >In-frame_ENST00000277817_ENST00000433211_TCGA-BB-7861-01A_HERC4_chr10_69749968_-_CTNNA3_chr10_67680375_length(amino acids)=493AA_start in transcript=495_stop in transcript=1976 MCVDSLVRICSGLSYGRIRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE LMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSFSHYSS PQNCGPPDDFRCPNPTKQIWTVNEALIQKWLSYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKL IQPDHPQISQQVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTALVNLEKAPLKVLVGQCHIPDPSSQKFNE -------------------------------------------------------------- >In-frame_ENST00000412272_ENST00000373744_TCGA-BB-7861-01A_HERC4_chr10_69749968_-_CTNNA3_chr10_67680375_length(transcript)=2480nt_BP=1881nt AGTCTCTTCCCCAACTCTCCCCACCCCTGGTGCTCTCCGCCCCGCTTGCCTCCCGTTCTTCCCCGCCCGCTCCATCCGGGTCGCTGACGG CTGTCTCTGGACTGGACAGCAGTGGCGTCCGCTTTTCTCTAAGGAACCCGATAAGAACTCCATTTTCTGTTGATGTGGAGACATAGGGTA CCTCCAACTTTCCGGGGTTTCAGAAGAGAATTTTTTATTGAAACTGGAAGACCAAAATAATTACAAGCATGTTGTGCTGGGGAAATGCAT CCTTTGGGCAGCTAGGTTTGGGTGGAATTGATGAAGAAATTGTACTAGAGCCCAGAAAAAGTGACTTCTTTATAAATAAAAGGGTCCGAG ATGTAGGATGTGGACTCAGACATACTGTGTTTGTTCTGGATGATGGAACAGTGTACACATGTGGATGTAATGATCTAGGACAGCTAGGTC ATGAAAAATCCAGAAAGAAACCAGAGCAGGTTGTTGCCCTGGATGCCCAAAATATTGTAGCTGTTTCATGTGGAGAAGCTCATACGTTAG CGCTAAATGACAAAGGCCAGGTGTATGCTTGGGGTCTCGATTCTGATGGACAGCTTGGCCTGGTAGGATCAGAGGAATGCATCAGAGTAC CCAGAAATATTAAAAGTTTGTCAGATATCCAGATTGTACAGGTTGCTTGTGGTTACTATCATTCACTTGCACTTTCTAAAGCAAGTGAAG TCTTCTGTTGGGGACAGAATAAATATGGCCAATTGGGTTTAGGTACTGACTGTAAAAAGCAAACTTCACCGCAGCTGCTTAAGTCTTTGC TTGGAATCCCTTTCATGCAAGTTGCAGCAGGAGGAGCCCATAGTTTTGTACTCACCCTTTCTGGAGCTATCTTTGGATGGGGACGCAACA AGTTTGGTCAGCTAGGTCTTAATGATGAAAATGATAGGTATGTTCCTAATTTACTAAAGTCACTAAGATCTCAGAAAATAGTTTATATTT GTTGTGGAGAAGATCATACTGCTGCTCTAACCAAGGAAGGTGGAGTGTTTACTTTTGGAGCTGGAGGGTATGGTCAGTTGGGCCATAATT CTACCAGTCATGAAATAAACCCAAGGAAAGTTTTTGAACTTATGGGAAGCATTGTCACTGAGATTGCTTGTGGACGGCAGCACACTTCTG CTTTTGTTCCTTCATCAGGACGAATTTACTCTTTTGGGCTTGGTGGTAATGGGCAGCTGGGAACCGGTTCAACAAGCAACAGGAAAAGCC CCTTTACTGTAAAAGGAAATTGGTACCCCTATAATGGGCAGTGTCTACCAGATATTGATTCTGAAGAATATTTCTGTGTAAAAAGAATTT TCTCAGGGGGAGATCAAAGCTTTTCACATTACTCTAGTCCCCAGAACTGTGGGCCACCAGATGACTTCAGATGTCCCAATCCGACAAAGC AGATCTGGACAGTGAATGAAGCTCTAATTCAGAAATGGCTGAGCTATCCTTCTGGAAGGTTTCCTGTGGAGATAGCCAATGAGATAGATG GAACGTTTTCTTCCTCTGGTTGCCTAAATGGAAGTTTTTTAGCTGTTAGCAATGATGATCACTATAGAACAGGTACCAGATTTTCAGGGG TTGATATGAATGCTGCTAGGCTTTTATTCCACAAACTTATACAACCTGATCATCCGCAGATATCTCAGCAGGTGGCAGCTAGTTTGGAAA AGAATCTTATTCCTAAACTGACTAGCTCCTTACCTGATGTTGAAGCATTGAGGTTTTATCTTACTCTACCAGAATGTCCCCTGATGAGTG ATTCCAACAATTTCACAACAATAGCAATTCCCTTTGGTACAGCTCTTGTGAACCTAGAAAAGGCACCACTGAAAGTACTTGTTGGACAGT GTCACATCCCTGATCCAAGCAGCCAAAAATTTAATGAATGCTGTAGTGCAAACAGTGAAAATGTCTTACATTGCCTCAACCAAGATCATC CGAATCCAGAGTCCTGCTGGGCCCCGGCACCCAGTTGTGATGTGGAGAATGAAGGCTCCTGCAAAAAAACCCTTGATTAAAAGAGAGAAG CCAGAGGAAACGTGTGCAGCTGTCAGACGAGGCTCAGCAAAGAAAAAAATCCATCCATTGCAAGTCATGAGTGAATTTAGAGGAAGACAA ATCTACTGAAACCACTATTCTACATATAGTGCCTATATGACAAAATCCTGCCTAACCACACTGCTTTATTTTACACTTAAGAAGTTCTGT AATTTCACTAAGTTTTGGTGTTTAACTCACAAATAACATAAAATATTGGGCGCTAAATCAACAAAAGCAATATATATTTGGGATCATATC ACTGTCATTTCTGTATGGTCAGCACCTAATAGTTAAGGAATATTTGCTTGTTGAATGAATGAAATTATCACGTGTCATTCAGCGTTTCCC >In-frame_ENST00000412272_ENST00000373744_TCGA-BB-7861-01A_HERC4_chr10_69749968_-_CTNNA3_chr10_67680375_length(amino acids)=603AA_start in transcript=248_stop in transcript=2059 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVS CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEE YFCVKRIFSGGDQSFSHYSSPQNCGPPDDFRCPNPTKQIWTVNEALIQKWLSYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYR TGTRFSGVDMNAARLLFHKLIQPDHPQISQQVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTALVNLEKAP -------------------------------------------------------------- >In-frame_ENST00000395198_ENST00000373744_TCGA-BB-7861-01A_HERC4_chr10_69749968_-_CTNNA3_chr10_67680375_length(transcript)=2480nt_BP=1881nt AGTCTCTTCCCCAACTCTCCCCACCCCTGGTGCTCTCCGCCCCGCTTGCCTCCCGTTCTTCCCCGCCCGCTCCATCCGGGTCGCTGACGG CTGTCTCTGGACTGGACAGCAGTGGCGTCCGCTTTTCTCTAAGGAACCCGATAAGAACTCCATTTTCTGTTGATGTGGAGACATAGGGTA CCTCCAACTTTCCGGGGTTTCAGAAGAGAATTTTTTATTGAAACTGGAAGACCAAAATAATTACAAGCATGTTGTGCTGGGGAAATGCAT CCTTTGGGCAGCTAGGTTTGGGTGGAATTGATGAAGAAATTGTACTAGAGCCCAGAAAAAGTGACTTCTTTATAAATAAAAGGGTCCGAG ATGTAGGATGTGGACTCAGACATACTGTGTTTGTTCTGGATGATGGAACAGTGTACACATGTGGATGTAATGATCTAGGACAGCTAGGTC ATGAAAAATCCAGAAAGAAACCAGAGCAGGTTGTTGCCCTGGATGCCCAAAATATTGTAGCTGTTTCATGTGGAGAAGCTCATACGTTAG CGCTAAATGACAAAGGCCAGGTGTATGCTTGGGGTCTCGATTCTGATGGACAGCTTGGCCTGGTAGGATCAGAGGAATGCATCAGAGTAC CCAGAAATATTAAAAGTTTGTCAGATATCCAGATTGTACAGGTTGCTTGTGGTTACTATCATTCACTTGCACTTTCTAAAGCAAGTGAAG TCTTCTGTTGGGGACAGAATAAATATGGCCAATTGGGTTTAGGTACTGACTGTAAAAAGCAAACTTCACCGCAGCTGCTTAAGTCTTTGC TTGGAATCCCTTTCATGCAAGTTGCAGCAGGAGGAGCCCATAGTTTTGTACTCACCCTTTCTGGAGCTATCTTTGGATGGGGACGCAACA AGTTTGGTCAGCTAGGTCTTAATGATGAAAATGATAGGTATGTTCCTAATTTACTAAAGTCACTAAGATCTCAGAAAATAGTTTATATTT GTTGTGGAGAAGATCATACTGCTGCTCTAACCAAGGAAGGTGGAGTGTTTACTTTTGGAGCTGGAGGGTATGGTCAGTTGGGCCATAATT CTACCAGTCATGAAATAAACCCAAGGAAAGTTTTTGAACTTATGGGAAGCATTGTCACTGAGATTGCTTGTGGACGGCAGCACACTTCTG CTTTTGTTCCTTCATCAGGACGAATTTACTCTTTTGGGCTTGGTGGTAATGGGCAGCTGGGAACCGGTTCAACAAGCAACAGGAAAAGCC CCTTTACTGTAAAAGGAAATTGGTACCCCTATAATGGGCAGTGTCTACCAGATATTGATTCTGAAGAATATTTCTGTGTAAAAAGAATTT TCTCAGGGGGAGATCAAAGCTTTTCACATTACTCTAGTCCCCAGAACTGTGGGCCACCAGATGACTTCAGATGTCCCAATCCGACAAAGC AGATCTGGACAGTGAATGAAGCTCTAATTCAGAAATGGCTGAGCTATCCTTCTGGAAGGTTTCCTGTGGAGATAGCCAATGAGATAGATG GAACGTTTTCTTCCTCTGGTTGCCTAAATGGAAGTTTTTTAGCTGTTAGCAATGATGATCACTATAGAACAGGTACCAGATTTTCAGGGG TTGATATGAATGCTGCTAGGCTTTTATTCCACAAACTTATACAACCTGATCATCCGCAGATATCTCAGCAGGTGGCAGCTAGTTTGGAAA AGAATCTTATTCCTAAACTGACTAGCTCCTTACCTGATGTTGAAGCATTGAGGTTTTATCTTACTCTACCAGAATGTCCCCTGATGAGTG ATTCCAACAATTTCACAACAATAGCAATTCCCTTTGGTACAGCTCTTGTGAACCTAGAAAAGGCACCACTGAAAGTACTTGTTGGACAGT GTCACATCCCTGATCCAAGCAGCCAAAAATTTAATGAATGCTGTAGTGCAAACAGTGAAAATGTCTTACATTGCCTCAACCAAGATCATC CGAATCCAGAGTCCTGCTGGGCCCCGGCACCCAGTTGTGATGTGGAGAATGAAGGCTCCTGCAAAAAAACCCTTGATTAAAAGAGAGAAG CCAGAGGAAACGTGTGCAGCTGTCAGACGAGGCTCAGCAAAGAAAAAAATCCATCCATTGCAAGTCATGAGTGAATTTAGAGGAAGACAA ATCTACTGAAACCACTATTCTACATATAGTGCCTATATGACAAAATCCTGCCTAACCACACTGCTTTATTTTACACTTAAGAAGTTCTGT AATTTCACTAAGTTTTGGTGTTTAACTCACAAATAACATAAAATATTGGGCGCTAAATCAACAAAAGCAATATATATTTGGGATCATATC ACTGTCATTTCTGTATGGTCAGCACCTAATAGTTAAGGAATATTTGCTTGTTGAATGAATGAAATTATCACGTGTCATTCAGCGTTTCCC >In-frame_ENST00000395198_ENST00000373744_TCGA-BB-7861-01A_HERC4_chr10_69749968_-_CTNNA3_chr10_67680375_length(amino acids)=603AA_start in transcript=248_stop in transcript=2059 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVS CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEE YFCVKRIFSGGDQSFSHYSSPQNCGPPDDFRCPNPTKQIWTVNEALIQKWLSYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYR TGTRFSGVDMNAARLLFHKLIQPDHPQISQQVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTALVNLEKAP -------------------------------------------------------------- >In-frame_ENST00000373700_ENST00000373744_TCGA-BB-7861-01A_HERC4_chr10_69749968_-_CTNNA3_chr10_67680375_length(transcript)=2545nt_BP=1946nt ACTTCCGGCCAGCCCCTCCCCCGCCTCCCTCGCGTGGCCACCTCCCCCTCTGCCTTCTCCTACCCAGTCTCTTCCCCAACTCTCCCCACC CCTGGTGCTCTCCGCCCCGCTTGCCTCCCGTTCTTCCCCGCCCGCTCCATCCGGGTCGCTGACGGCTGTCTCTGGACTGGACAGCAGTGG CGTCCGCTTTTCTCTAAGGAACCCGATAAGAACTCCATTTTCTGTTGATGTGGAGACATAGGGTACCTCCAACTTTCCGGGGTTTCAGAA GAGAATTTTTTATTGAAACTGGAAGACCAAAATAATTACAAGCATGTTGTGCTGGGGAAATGCATCCTTTGGGCAGCTAGGTTTGGGTGG AATTGATGAAGAAATTGTACTAGAGCCCAGAAAAAGTGACTTCTTTATAAATAAAAGGGTCCGAGATGTAGGATGTGGACTCAGACATAC TGTGTTTGTTCTGGATGATGGAACAGTGTACACATGTGGATGTAATGATCTAGGACAGCTAGGTCATGAAAAATCCAGAAAGAAACCAGA GCAGGTTGTTGCCCTGGATGCCCAAAATATTGTAGCTGTTTCATGTGGAGAAGCTCATACGTTAGCGCTAAATGACAAAGGCCAGGTGTA TGCTTGGGGTCTCGATTCTGATGGACAGCTTGGCCTGGTAGGATCAGAGGAATGCATCAGAGTACCCAGAAATATTAAAAGTTTGTCAGA TATCCAGATTGTACAGGTTGCTTGTGGTTACTATCATTCACTTGCACTTTCTAAAGCAAGTGAAGTCTTCTGTTGGGGACAGAATAAATA TGGCCAATTGGGTTTAGGTACTGACTGTAAAAAGCAAACTTCACCGCAGCTGCTTAAGTCTTTGCTTGGAATCCCTTTCATGCAAGTTGC AGCAGGAGGAGCCCATAGTTTTGTACTCACCCTTTCTGGAGCTATCTTTGGATGGGGACGCAACAAGTTTGGTCAGCTAGGTCTTAATGA TGAAAATGATAGGTATGTTCCTAATTTACTAAAGTCACTAAGATCTCAGAAAATAGTTTATATTTGTTGTGGAGAAGATCATACTGCTGC TCTAACCAAGGAAGGTGGAGTGTTTACTTTTGGAGCTGGAGGGTATGGTCAGTTGGGCCATAATTCTACCAGTCATGAAATAAACCCAAG GAAAGTTTTTGAACTTATGGGAAGCATTGTCACTGAGATTGCTTGTGGACGGCAGCACACTTCTGCTTTTGTTCCTTCATCAGGACGAAT TTACTCTTTTGGGCTTGGTGGTAATGGGCAGCTGGGAACCGGTTCAACAAGCAACAGGAAAAGCCCCTTTACTGTAAAAGGAAATTGGTA CCCCTATAATGGGCAGTGTCTACCAGATATTGATTCTGAAGAATATTTCTGTGTAAAAAGAATTTTCTCAGGGGGAGATCAAAGCTTTTC ACATTACTCTAGTCCCCAGAACTGTGGGCCACCAGATGACTTCAGATGTCCCAATCCGACAAAGCAGATCTGGACAGTGAATGAAGCTCT AATTCAGAAATGGCTGAGCTATCCTTCTGGAAGGTTTCCTGTGGAGATAGCCAATGAGATAGATGGAACGTTTTCTTCCTCTGGTTGCCT AAATGGAAGTTTTTTAGCTGTTAGCAATGATGATCACTATAGAACAGGTACCAGATTTTCAGGGGTTGATATGAATGCTGCTAGGCTTTT ATTCCACAAACTTATACAACCTGATCATCCGCAGATATCTCAGCAGGTGGCAGCTAGTTTGGAAAAGAATCTTATTCCTAAACTGACTAG CTCCTTACCTGATGTTGAAGCATTGAGGTTTTATCTTACTCTACCAGAATGTCCCCTGATGAGTGATTCCAACAATTTCACAACAATAGC AATTCCCTTTGGTACAGCTCTTGTGAACCTAGAAAAGGCACCACTGAAAGTACTTGTTGGACAGTGTCACATCCCTGATCCAAGCAGCCA AAAATTTAATGAATGCTGTAGTGCAAACAGTGAAAATGTCTTACATTGCCTCAACCAAGATCATCCGAATCCAGAGTCCTGCTGGGCCCC GGCACCCAGTTGTGATGTGGAGAATGAAGGCTCCTGCAAAAAAACCCTTGATTAAAAGAGAGAAGCCAGAGGAAACGTGTGCAGCTGTCA GACGAGGCTCAGCAAAGAAAAAAATCCATCCATTGCAAGTCATGAGTGAATTTAGAGGAAGACAAATCTACTGAAACCACTATTCTACAT ATAGTGCCTATATGACAAAATCCTGCCTAACCACACTGCTTTATTTTACACTTAAGAAGTTCTGTAATTTCACTAAGTTTTGGTGTTTAA CTCACAAATAACATAAAATATTGGGCGCTAAATCAACAAAAGCAATATATATTTGGGATCATATCACTGTCATTTCTGTATGGTCAGCAC CTAATAGTTAAGGAATATTTGCTTGTTGAATGAATGAAATTATCACGTGTCATTCAGCGTTTCCCATCATAGAGATTATCTACTATTCGT >In-frame_ENST00000373700_ENST00000373744_TCGA-BB-7861-01A_HERC4_chr10_69749968_-_CTNNA3_chr10_67680375_length(amino acids)=603AA_start in transcript=313_stop in transcript=2124 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVS CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEE YFCVKRIFSGGDQSFSHYSSPQNCGPPDDFRCPNPTKQIWTVNEALIQKWLSYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYR TGTRFSGVDMNAARLLFHKLIQPDHPQISQQVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTALVNLEKAP -------------------------------------------------------------- >In-frame_ENST00000412272_ENST00000433211_TCGA-BB-7861-01A_HERC4_chr10_69748420_-_CTNNA3_chr10_67748555_length(transcript)=10395nt_BP=2054nt AGTCTCTTCCCCAACTCTCCCCACCCCTGGTGCTCTCCGCCCCGCTTGCCTCCCGTTCTTCCCCGCCCGCTCCATCCGGGTCGCTGACGG CTGTCTCTGGACTGGACAGCAGTGGCGTCCGCTTTTCTCTAAGGAACCCGATAAGAACTCCATTTTCTGTTGATGTGGAGACATAGGGTA CCTCCAACTTTCCGGGGTTTCAGAAGAGAATTTTTTATTGAAACTGGAAGACCAAAATAATTACAAGCATGTTGTGCTGGGGAAATGCAT CCTTTGGGCAGCTAGGTTTGGGTGGAATTGATGAAGAAATTGTACTAGAGCCCAGAAAAAGTGACTTCTTTATAAATAAAAGGGTCCGAG ATGTAGGATGTGGACTCAGACATACTGTGTTTGTTCTGGATGATGGAACAGTGTACACATGTGGATGTAATGATCTAGGACAGCTAGGTC ATGAAAAATCCAGAAAGAAACCAGAGCAGGTTGTTGCCCTGGATGCCCAAAATATTGTAGCTGTTTCATGTGGAGAAGCTCATACGTTAG CGCTAAATGACAAAGGCCAGGTGTATGCTTGGGGTCTCGATTCTGATGGACAGCTTGGCCTGGTAGGATCAGAGGAATGCATCAGAGTAC CCAGAAATATTAAAAGTTTGTCAGATATCCAGATTGTACAGGTTGCTTGTGGTTACTATCATTCACTTGCACTTTCTAAAGCAAGTGAAG TCTTCTGTTGGGGACAGAATAAATATGGCCAATTGGGTTTAGGTACTGACTGTAAAAAGCAAACTTCACCGCAGCTGCTTAAGTCTTTGC TTGGAATCCCTTTCATGCAAGTTGCAGCAGGAGGAGCCCATAGTTTTGTACTCACCCTTTCTGGAGCTATCTTTGGATGGGGACGCAACA AGTTTGGTCAGCTAGGTCTTAATGATGAAAATGATAGGTATGTTCCTAATTTACTAAAGTCACTAAGATCTCAGAAAATAGTTTATATTT GTTGTGGAGAAGATCATACTGCTGCTCTAACCAAGGAAGGTGGAGTGTTTACTTTTGGAGCTGGAGGGTATGGTCAGTTGGGCCATAATT CTACCAGTCATGAAATAAACCCAAGGAAAGTTTTTGAACTTATGGGAAGCATTGTCACTGAGATTGCTTGTGGACGGCAGCACACTTCTG CTTTTGTTCCTTCATCAGGACGAATTTACTCTTTTGGGCTTGGTGGTAATGGGCAGCTGGGAACCGGTTCAACAAGCAACAGGAAAAGCC CCTTTACTGTAAAAGGAAATTGGTACCCCTATAATGGGCAGTGTCTACCAGATATTGATTCTGAAGAATATTTCTGTGTAAAAAGAATTT TCTCAGGGGGAGATCAAAGCTTTTCACATTACTCTAGTCCCCAGAACTGTGGGCCACCAGATGACTTCAGATGTCCCAATCCGACAAAGC AGATCTGGACAGTGAATGAAGCTCTAATTCAGAAATGGCTGAGCTATCCTTCTGGAAGGTTTCCTGTGGAGATAGCCAATGAGATAGATG GAACGTTTTCTTCCTCTGGTTGCCTAAATGGAAGTTTTTTAGCTGTTAGCAATGATGATCACTATAGAACAGGTACCAGATTTTCAGGGG TTGATATGAATGCTGCTAGGCTTTTATTCCACAAACTTATACAACCTGATCATCCGCAGATATCTCAGCAGGTGGCAGCTAGTTTGGAAA AGAATCTTATTCCTAAACTGACTAGCTCCTTACCTGATGTTGAAGCATTGAGGTTTTATCTTACTCTACCAGAATGTCCCCTGATGAGTG ATTCCAACAATTTCACAACAATAGCAATTCCCTTTGGTACAGCTCTTGTGAACCTAGAAAAGGCACCACTGAAAGTACTTGAAAACTGGT GGTCAGTACTTGAACCTCCACTATTCCTCAAGATAGTAGAACTTTTTAAGGAAGTTGTGGTACATCTTTTGAAACTCTACAAGATCGGTA TTCCCCCTTCTGAAAGAAGAATTTTCAACAGTTTTCTTCATACTGCATTAAAGGTTTTAGAAATACTACATAGGGGGCAAAGGACCACTA AAGCATACAACTGATGTGATCTATGCAGCGAAAATGATATCAGAATCAGGATCAAGGATGGATGTCCTTGCTCGGCAGATTGCTAATCAG TGCCCAGATCCATCTTGTAAACAGGACTTGTTGGCCTACCTGGAACAGATTAAGTTCTACTCCCACCAACTGAAAATCTGCAGTCAAGTT AAAGCTGAGATCCAGAACCTGGGAGGAGAGCTCATCATGTCAGCTTTGGACAGTGTCACATCCCTGATCCAAGCAGCCAAAAATTTAATG AATGCTGTAGTGCAAACAGTGAAAATGTCTTACATTGCCTCAACCAAGATCATCCGAATCCAGAGTCCTGCTGGGCCCCGGCACCCAGTT GTGATGTGGAGAATGAAGGCTCCTGCAAAAAAACCCTTGATTAAAAGAGAGAAGCCAGAGGAAACGTGTGCAGCTGTCAGACGAGGCTCA GCAAAGAAAAAAATCCATCCATTGCAAGTCATGAGTGAATTTAGAGGAAGACAAATCTACTGAAACCACTATTCTACATATAGTGCCTAT ATGACAAAATCCTGCCTAACCACACTGCTTTATTTTACACTTAAGAAGTTCTGTAATTTCACTAAGTTTTGGTGTTTAACTCACAAATAA CATAAAATATTGGGCGCTAAATCAACAAAAGCAATATATATTTGGGATCATATCACTGTCATTTCTGTATGGTCAGCACCTAATAGTTAA GGAATATTTGCTTGTTGAATGAATGAAATTATCACGTGTCATTCAGCGTTTCCCATCATAGAGATTATCTACTATTCGTTACCAAATAAA CACAGGAGAGGCCAGAGAGTCCTGTTTATCTGTAATACTTCATGTACACTTATCATCCTTATCTTGAATTAAAACACTAACATGAGCTCC TAACTTGGTTTTTTAATAGAAACAAAAGACTTTTATAAAATATTTTCCCATTTAATCTCCATGCTTTCTTTATCTGATCTAACCTGGCAC CTAACCAGGCAGAAATGTATGATTCCTGCCATAGCAAAAAAACCACCTTTTAATCTCTAGATAGCTGTACTCATTGTCAACTTATTAGGC TAATATCCATTATAAACTAATCAAATTTGAATAGTTAGGCTACTTGCTGGATTTTGAAGGTCAACCTTGTTTATTAATAAAATGCTTTCT TAACATTATAAAGGTTACAATGAGTTCTGATGCCACATACTCACCTTTTGGGTTTCCAATGTGTTAGAGAGTTCTGTACTTTTGAGTGTT AGGCCTATCCGAATACATATGTGAAAGAAGAGTTATCACCCATTGGGAAAATGAGACAACAAACTATATCCCAAAGTGAGTTATATTAAT AATAACAGAAGTGTAAGTTCTGTATGACCCTATTTTTACAAACATAAAAATACATTTTTATCAGCTTGCAATTGTAATTAAAAGGAAAAT GGCAGTTTGAAAAATCTTTTGACGTTGAGTAAAATATAACTGCATGAACTGTACCATTGAACTATGAAGCAGTTAATGGCAATGAAGCTG GAGTGATTTTAATAACGTTCTTTTAAATAAAAGTCACTGGGGTCATTTTACAACTCCAGTCACTGTGTTCATTCCTAGTTGAGTTCATAA TGGACTTCATAATAGTCTTAGAGTCTAGTGTACCTCTCTCTGTCATTCTCTCTCTCTTTTTCTCTCCCCTGATGACCTGCCTCTCTCTGT CTTTCAAAAATGTCCTTAACAGAAACTCTTTGGAGGCCATAAGTTTTGTTTTCATTTTTTCTCATTCATAGAGTTCTGATTCACAGACTT TAAAAAACATTTTCTATTCTACATTATCATAATAGTATTATATTGTACCTTTTTACTTCTAAAACATTGCCATTGATGAGAGGCGTCTCA GCAACGATGTAACCTTAGATTGATGAGAAAAAAATTTACACATACAATACCAGTTGATATTAGGAGAACCAGTTTGGGTAAAAGGATGCA TGAAACATAGAAAAGCATAAAGATTGACAGTACGATATGTGTGGAATCTTAAGCATAATGGTATGGGAAAAGAAGGATCTATTTAATAGG TCATTATTAATTATGCAGGAAATGTTAAATTTCTTGTAATGAATTATTTCAATCTTCCAAGTAGCTGGATTGCCTGAGCTCAGTGTAAAA CTTCCTAGGAGGTGAAGGCAATAAACTCCTCCCTGTTTTGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAG AAGAAAAGGCAGTGAAGAAGGGAATTAGGGAATTCAGATGACTCTGTTTTTCAGAATTATCTAGATGATTGAGGCAAATAGAGATTTTCT TTTATTGAAATGCTGCCATCATTTTCTGCTCTAAGTGTAGATGTTGCACGAGTGACATCTGTGGTATATCCTTCTTCCAGATAGAAGTAT AAATTTATAATTTAGTGGGGAGAGGAATTTTCTTTTAATCACCAAACTACCAGCTGTATAGAAAATTTTTTTGAAATCACCAAACTAGCA GTTGTGTATCTTAGCTCCTAAAGCCACATTCACAAGAATCATAAGCATCTCATTTAGAAAATCTAATGTCCACCGGACCCAACATCATCT TTCCACATGTTGGAGTTTAGAACATGCAGTATTGGACACCAAAAGAACAGAAATAACTTGAAATTATACAATTACCAAATAACCTCCATC TCTTTGATAAAAATGACTTTTTACCCAAAGTGAGATGTGAACAAGTTCTCCTCTTTAACCCAGGCAGATTTTCAGCTTAGCTCAAAGCAA ACTATAATTAAATAAAACAATAAAAATTTTAACTCAATGAATATCCTAGGAGTTAATCTGCTGTGGTAATCGATAGTGACATAAAAACAA GATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAGTAGGCAGCATTTCAAGATTTAGTTTGATTCAAACCTGCTG ATAAAACAAATGCTTATATGCAAGAAAAACTAGCAGCAAGATATGAATAAATCTCCCCATTATGTTAAAAACTAATCAGCATGACACATT TATATTTAGGTATTTCTTCTGCAGAGGATTGCCAGAAATTTCTTAATGAGAGTGATAATTTGGTGATCCACCTATGTACCTTTTGATGTC TCATCACAGAGATTAGTGCTTCCTCTGATAATACATTTGCTTGATCCTGCTAATAAGAACTCACCTTTCTTTTTAACGAAATCAATTTGT GTTAATTTACATAGGGAAAAACGTTCCTTGAGAGGGAGGAGAGGGGTGTTTACCACCCACAGGAGCAGTTCCATCCCTGGTTACCCACCA GTATCCCTGCCAGATGTTAGACTGGAATTAGAATGAAAATTTAAAAAAAAACGAAATAATAATCCACTAAATGGCCTTCTAATTAGAGAA ATTTGAAGATTTCTATCAAATATAAAAAGTGAGAAATAGAAATCATTCCCTTTAATTTATGACAAATTAAAATTATTGAAGTAAAATGTT TCTAAGTCAGTTTCTGGATAGTTCTTGAATGAGTCAAGAAAAAACTCAAACACTAAATTTCTAAGCTAATTTGTTCATTATTCCTTTCTG TTTATTATTTATTATATGAGTGCAAATTGCAAATGTATTAGAAAAGACAATATAGCCTTCACATTCACAAGTGTGCCTTCTGGCCTTTGA AATCTTTTAACATAAGATCAATATAACATATTTGTTCCCCATAAAAATCTCTTATGTACAGGGAATAAGGTCCTCCATAGCTACACAGAG ACACCCATTCTTGCAGTCTGGCATTCTTAACACCTTTAGCTTCAAAGGCAGTCGGTTTCAATTTCAAGCTAAAATTGTGAATATACAATT AAGTGCGCAACTTGGGCCTTCAGACCAAATAATTAATGCTCCTCAAATTAAATAATGAGTGGCTGAAAAGCCTAATGTGTAACAACAGAG TAAGTGACTTCAACGGCTTCCTGAACCTTCATTTTGAGGGTGTTCTCATCTCACCCACCTCTGGGCTAGGTATCCTCTGTTAATTGCTAA CAATTTCCTACCAAAATAGTGCAATCAGGACTGCCCATCACAGCAAATTACTCCAATTAATGCCCTTTCCTCTTCTGTGAACCAAAAATA TCTCTCTCCTGTCTCTCATCTCTATCCCAGGTATAAATTGACTAATAAATTTTACAGAGTTTTAGTCAAAATTATGAATTTTAATTTCCA GCAACATTATTCCTTTAGTCTTTCTATTCCCCAAAACATTCTTAAATTTTGGTATCAAATGTTCATTTCTGTCCTAGAGATTGTGGTTCC CATGGCTACAGATTTTTGTATAGTGGTAGTATGAGTGGAATAAGATCTGAGACTTTTCCTGGTGATATCCACCATTCTCTTGTGAACTCA TTGCAGAATAAACAGCCTCTTTCACTTTCATTGTAAGTAGTTCTTTAGGTTGGCAAAGCAGGCACCAGAATCTGAATTTGAATGAAATCT GTACTTTCTTTTGTTGGCCTATTTTTTGCCAAGACAGCCTGCCTATTGTATATTTAGGAATCAAATATTCATTTTTTCTGTTTGTAAAGC CAGAAATATTTCAGTTAAAAAGAATATAATTTTATATTATTTTAATAATTCTTTTTAAGTAAAGTAGGAAAATTTCTGCCACCTGAGATG TTACTGTTTTTATTTATATGAAAATTCCATTTTTTTCTTTATGACTCTTTTCCCATACCATTATGATATGTTCAGCATTAGTATTTTCCA TTTTACCACTAAACAAATAAGCCAGGACTAATAACAATAGCAGTTTGAGAGTTTTTATTTTGGCATTTTGGTTTTAATTAGGAAAGAAAA CATGGATGCTATTAAAACTAGTTGTAGTTAAAAATGTTTTGAATGAGGCTACTAACGCTATCTTAGTCATCTCAAAGAGAAAGAGAAGAA GTAAAATTTTAAATACCTTTTTGGCATTTTTAACCAATTCATATGAACAAAAACATATATTCTATTAAAGCAAAATAAAGAATAGTTTAA AACACTAGTCTTCTTGCATGTGAATATTTTCCCCCTAACAGACAAGATAGAATCCATTTCTGGACACTCTAAAAGAAAGTAATGTTAATT GAGAGAGCTGTCTCCAAATGGAACTCAACCTGACCAGAATCCCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTC TGAGACGAGATGCTTTATGGCTGCTGGCTGCATTATGGCATCTAGCAGTCCCCACTGGTTTGTGGGAACAAAACACATGGATTGATATTC AATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGG GTCTGAGAGGGGTAGTTGCAGAAGCATTTAGCTTTCATAGATGAGGGGAGAGTTTTTTGGTTTTATGAAGATTAGGCAGCCCTCCTGAGG AAAGTATTAAGGATAGAATGAGACACTTGTCTTGGTGGTTTGGTGAAGTCGTGTCGAAGGCAAAAGGATGAACTACACATATTTTGAGCA TGATTTAGTAATATTGTTTGCAAGTTGAGAAACAGAAATTCAGCCATTCTCCTGACTGATGGTAGGTGAAATTCTTCCCAATATTAGAGC CAATCTGGGTTACCATACGTTCATATATTTAACAGCTATTTGTTAAACAACTGTGATGTTCCAGGCACTGTTCTAGGTTCTTAGGATACA CCATATAACAAAACAAATAGTGATCCTTGCCCTCATGTGCCAGCTCTGTGTTAAATGCTAACTATTATCTTATTCAATCCTCCAAATAAC CCTATAGGATATATATCATTCCACAGACAAGGAAGCTGAGGGTTAAATGGGATAAGAATCTTGCTCAAAGTCTCACTGGCTTTAAAATAT TAATATATATTTTACATCATTCAAGACAGATATATAATTAGCTGAATATTCTCACCTCTATTAACTGAATGTAGAGTGTCAGGTACATGG GAAGTAAGTTATTTACGTGATCTGAAATAAGAGGACAACCTTTGCCAAATTACTTTTATTACCATGGAGAAGAAAGCTTCAATGAAATGC CTGTTTCAGCCCATCTTCAGTATTGGTTGGTTAATACCATTTGTTAACACCAATCCTTTCCTCTTTTACTGCTAACATGTGACTGTGTTT AAAATTATAGATTGCAGCAGAGTGTTGGCCAAGGATTATTGTAGTAGGATAAAGTTTCCCTGTATTTGAAATTTACCCAAACTGTAGCAA ATACATCTTTCCTTCTTTATGGAGGTCACACGTGTGCATAGTATGTGCCTGAATACAGGTAAACTTTGTGTTTTAAAATTACATGGCCTT TTTTAGAGTCGACTGAAGGCTAGACTCTTCTTGCCCATGTTGCTGGATAGGCTTTCAAATCTCAGGCCTTGGAGAGTTAAATGACTTTCT GATATTTCTTACGGTGGAGCCACATAAGAAATACACACATTCCTAGTTTGAGCAATGGATGTGTATATTGGGGATCTTCACTTTTATGTA TCTGGTAGTCATGATGGTGCCTATTCCCAACTGTAGGAAAGGAAAGCCCTCAAGGAGAAAATTCTCTTTCAAAAAGGCTCAGATTTCTAA CAATTATGTCTAAATGTTTCTTCAATTTAGAACATGTACAAAAGCTACTTAATATTAGCAGAGTAGTTCTTGTGTTTTCATTTCAAATGA AATATTCCCAGTTCCAAAGTTTATTTCCTTGGCATTTTCAAGAAGGATGGTTATTTTTAGTTCTGGTTATTTGGTGTTGGAGGTCTGTGA CACTTCCTTATACATTTAAAGCCCCCTTTGAATAGTTGTATCAATAGTTCAAAAGCCTGTAGATATCTTGCTTTTCTATTCTGACAGCCC AGCTTCTGCAGACTCAGGCCAACCTTAGGTATGTCACATCAGTTCCCCATCTGTGTAAATTACCTGAACCTCTCTGTGGTATTCACTGAG AGTTGAGCTTCTACTAAGGGATTTCCTTGACCTGGGCTTTTAACACCAGATTTGTAGTGGAGTGTTTATTAGTAAAGCAAAGGAGTAAGT CAGAGATGCTAGCCCCTGCTCTCAGTTAAACAGAACTATCCTCCTTCCTGAATATTTAAACATAAAATTAATTTTAAACTACTATAAAAA TCATGTTCCATTGCTTGCCAAATCTTATACCATTATAATGCTGTATTTTTACATGTTAGTATACATTGTGTCCATAGGGATATAAATATG AGAATTTCAGCAACTGTCTTGCAGGGTTAAGATGTGCTATTTGTTGATTTTGCAAATTTTTCTCATGTGGTACAGTCCCTCCAAAGAAAA TTTCCTTAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTTCCTGAAAACAGAAGTAGACATATTTTATGC CCAATTTAGTACCTAATAATTGAGGCTTAAAACAAAATTTTCTTGGGCAAGTTGGGTGATTAAATATGAATTAAAACTTCTAGAGAAAGA TTTCCAGATGCCCCTGTTTTCCATTTTGATTATGGTTTTAGTTTCATAGCAACTTGGGGGAAAAAAATCATTTACTTTATGTCGTATTAC AACAACAACTTTGACAGCTTAAATGTAGTGACCTCTCTGAAGGTAATATGCACATTATAATTTAGGATGAAAGCAGATTTAAACTAAGAC TTTCTGAGATGAAATAAAAGTAACCAATTCATAATAGTCATGTTTATTGCAGCAATATCTTGGGAACTTAAGTTTAGTGGCGTTTGAGGT GTTTCTGACTATCTTGCTTGTTCATTTCACCCTGCTCTGCAGAGACAGAATATGATTGAATGAACTGCCCATTATATTAATGACCAGTTC AAAGCAGTTTTGTGCTTTGGCTATAGATAAAATTTGGCAAAAATACTGTAGGCCTTTCTGGTCCATATTTATCCTTAAAGTATTTTTGCC AATCAATAAAAATGAAATATTTATCCAGAAATAGAAAAAGCTCTTTCCTATGACATTGACATAGAAGCCCAAATACTCCTTGTTTGAGAC CCTGCATGTCTTTTGTGTTTAACTGAATCAATGATTTTTTTTAGTTGTGCTCTTAATTGCATTATTTCACATATGTAACACTGGGTTTGT TTTGGTTATATAGTATTATTTTACTTTATTCTAATTTCAACTCATGTCACTCTGTAGCTCATTAAGAATTTGTTCAACTGAAAATTAAAA >In-frame_ENST00000412272_ENST00000433211_TCGA-BB-7861-01A_HERC4_chr10_69748420_-_CTNNA3_chr10_67748555_length(amino acids)=611AA_start in transcript=248_stop in transcript=2083 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVS CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEE YFCVKRIFSGGDQSFSHYSSPQNCGPPDDFRCPNPTKQIWTVNEALIQKWLSYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYR TGTRFSGVDMNAARLLFHKLIQPDHPQISQQVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTALVNLEKAP -------------------------------------------------------------- >In-frame_ENST00000412272_ENST00000373744_TCGA-BB-7861-01A_HERC4_chr10_69748420_-_CTNNA3_chr10_67748555_length(transcript)=2894nt_BP=2054nt AGTCTCTTCCCCAACTCTCCCCACCCCTGGTGCTCTCCGCCCCGCTTGCCTCCCGTTCTTCCCCGCCCGCTCCATCCGGGTCGCTGACGG CTGTCTCTGGACTGGACAGCAGTGGCGTCCGCTTTTCTCTAAGGAACCCGATAAGAACTCCATTTTCTGTTGATGTGGAGACATAGGGTA CCTCCAACTTTCCGGGGTTTCAGAAGAGAATTTTTTATTGAAACTGGAAGACCAAAATAATTACAAGCATGTTGTGCTGGGGAAATGCAT CCTTTGGGCAGCTAGGTTTGGGTGGAATTGATGAAGAAATTGTACTAGAGCCCAGAAAAAGTGACTTCTTTATAAATAAAAGGGTCCGAG ATGTAGGATGTGGACTCAGACATACTGTGTTTGTTCTGGATGATGGAACAGTGTACACATGTGGATGTAATGATCTAGGACAGCTAGGTC ATGAAAAATCCAGAAAGAAACCAGAGCAGGTTGTTGCCCTGGATGCCCAAAATATTGTAGCTGTTTCATGTGGAGAAGCTCATACGTTAG CGCTAAATGACAAAGGCCAGGTGTATGCTTGGGGTCTCGATTCTGATGGACAGCTTGGCCTGGTAGGATCAGAGGAATGCATCAGAGTAC CCAGAAATATTAAAAGTTTGTCAGATATCCAGATTGTACAGGTTGCTTGTGGTTACTATCATTCACTTGCACTTTCTAAAGCAAGTGAAG TCTTCTGTTGGGGACAGAATAAATATGGCCAATTGGGTTTAGGTACTGACTGTAAAAAGCAAACTTCACCGCAGCTGCTTAAGTCTTTGC TTGGAATCCCTTTCATGCAAGTTGCAGCAGGAGGAGCCCATAGTTTTGTACTCACCCTTTCTGGAGCTATCTTTGGATGGGGACGCAACA AGTTTGGTCAGCTAGGTCTTAATGATGAAAATGATAGGTATGTTCCTAATTTACTAAAGTCACTAAGATCTCAGAAAATAGTTTATATTT GTTGTGGAGAAGATCATACTGCTGCTCTAACCAAGGAAGGTGGAGTGTTTACTTTTGGAGCTGGAGGGTATGGTCAGTTGGGCCATAATT CTACCAGTCATGAAATAAACCCAAGGAAAGTTTTTGAACTTATGGGAAGCATTGTCACTGAGATTGCTTGTGGACGGCAGCACACTTCTG CTTTTGTTCCTTCATCAGGACGAATTTACTCTTTTGGGCTTGGTGGTAATGGGCAGCTGGGAACCGGTTCAACAAGCAACAGGAAAAGCC CCTTTACTGTAAAAGGAAATTGGTACCCCTATAATGGGCAGTGTCTACCAGATATTGATTCTGAAGAATATTTCTGTGTAAAAAGAATTT TCTCAGGGGGAGATCAAAGCTTTTCACATTACTCTAGTCCCCAGAACTGTGGGCCACCAGATGACTTCAGATGTCCCAATCCGACAAAGC AGATCTGGACAGTGAATGAAGCTCTAATTCAGAAATGGCTGAGCTATCCTTCTGGAAGGTTTCCTGTGGAGATAGCCAATGAGATAGATG GAACGTTTTCTTCCTCTGGTTGCCTAAATGGAAGTTTTTTAGCTGTTAGCAATGATGATCACTATAGAACAGGTACCAGATTTTCAGGGG TTGATATGAATGCTGCTAGGCTTTTATTCCACAAACTTATACAACCTGATCATCCGCAGATATCTCAGCAGGTGGCAGCTAGTTTGGAAA AGAATCTTATTCCTAAACTGACTAGCTCCTTACCTGATGTTGAAGCATTGAGGTTTTATCTTACTCTACCAGAATGTCCCCTGATGAGTG ATTCCAACAATTTCACAACAATAGCAATTCCCTTTGGTACAGCTCTTGTGAACCTAGAAAAGGCACCACTGAAAGTACTTGAAAACTGGT GGTCAGTACTTGAACCTCCACTATTCCTCAAGATAGTAGAACTTTTTAAGGAAGTTGTGGTACATCTTTTGAAACTCTACAAGATCGGTA TTCCCCCTTCTGAAAGAAGAATTTTCAACAGTTTTCTTCATACTGCATTAAAGGTTTTAGAAATACTACATAGGGGGCAAAGGACCACTA AAGCATACAACTGATGTGATCTATGCAGCGAAAATGATATCAGAATCAGGATCAAGGATGGATGTCCTTGCTCGGCAGATTGCTAATCAG TGCCCAGATCCATCTTGTAAACAGGACTTGTTGGCCTACCTGGAACAGATTAAGTTCTACTCCCACCAACTGAAAATCTGCAGTCAAGTT AAAGCTGAGATCCAGAACCTGGGAGGAGAGCTCATCATGTCAGCTTTGGACAGTGTCACATCCCTGATCCAAGCAGCCAAAAATTTAATG AATGCTGTAGTGCAAACAGTGAAAATGTCTTACATTGCCTCAACCAAGATCATCCGAATCCAGAGTCCTGCTGGGCCCCGGCACCCAGTT GTGATGTGGAGAATGAAGGCTCCTGCAAAAAAACCCTTGATTAAAAGAGAGAAGCCAGAGGAAACGTGTGCAGCTGTCAGACGAGGCTCA GCAAAGAAAAAAATCCATCCATTGCAAGTCATGAGTGAATTTAGAGGAAGACAAATCTACTGAAACCACTATTCTACATATAGTGCCTAT ATGACAAAATCCTGCCTAACCACACTGCTTTATTTTACACTTAAGAAGTTCTGTAATTTCACTAAGTTTTGGTGTTTAACTCACAAATAA CATAAAATATTGGGCGCTAAATCAACAAAAGCAATATATATTTGGGATCATATCACTGTCATTTCTGTATGGTCAGCACCTAATAGTTAA GGAATATTTGCTTGTTGAATGAATGAAATTATCACGTGTCATTCAGCGTTTCCCATCATAGAGATTATCTACTATTCGTTACCAAATAAA >In-frame_ENST00000412272_ENST00000373744_TCGA-BB-7861-01A_HERC4_chr10_69748420_-_CTNNA3_chr10_67748555_length(amino acids)=611AA_start in transcript=248_stop in transcript=2083 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVS CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEE YFCVKRIFSGGDQSFSHYSSPQNCGPPDDFRCPNPTKQIWTVNEALIQKWLSYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYR TGTRFSGVDMNAARLLFHKLIQPDHPQISQQVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTALVNLEKAP -------------------------------------------------------------- >In-frame_ENST00000395198_ENST00000433211_TCGA-BB-7861-01A_HERC4_chr10_69748420_-_CTNNA3_chr10_67748555_length(transcript)=10395nt_BP=2054nt AGTCTCTTCCCCAACTCTCCCCACCCCTGGTGCTCTCCGCCCCGCTTGCCTCCCGTTCTTCCCCGCCCGCTCCATCCGGGTCGCTGACGG CTGTCTCTGGACTGGACAGCAGTGGCGTCCGCTTTTCTCTAAGGAACCCGATAAGAACTCCATTTTCTGTTGATGTGGAGACATAGGGTA CCTCCAACTTTCCGGGGTTTCAGAAGAGAATTTTTTATTGAAACTGGAAGACCAAAATAATTACAAGCATGTTGTGCTGGGGAAATGCAT CCTTTGGGCAGCTAGGTTTGGGTGGAATTGATGAAGAAATTGTACTAGAGCCCAGAAAAAGTGACTTCTTTATAAATAAAAGGGTCCGAG ATGTAGGATGTGGACTCAGACATACTGTGTTTGTTCTGGATGATGGAACAGTGTACACATGTGGATGTAATGATCTAGGACAGCTAGGTC ATGAAAAATCCAGAAAGAAACCAGAGCAGGTTGTTGCCCTGGATGCCCAAAATATTGTAGCTGTTTCATGTGGAGAAGCTCATACGTTAG CGCTAAATGACAAAGGCCAGGTGTATGCTTGGGGTCTCGATTCTGATGGACAGCTTGGCCTGGTAGGATCAGAGGAATGCATCAGAGTAC CCAGAAATATTAAAAGTTTGTCAGATATCCAGATTGTACAGGTTGCTTGTGGTTACTATCATTCACTTGCACTTTCTAAAGCAAGTGAAG TCTTCTGTTGGGGACAGAATAAATATGGCCAATTGGGTTTAGGTACTGACTGTAAAAAGCAAACTTCACCGCAGCTGCTTAAGTCTTTGC TTGGAATCCCTTTCATGCAAGTTGCAGCAGGAGGAGCCCATAGTTTTGTACTCACCCTTTCTGGAGCTATCTTTGGATGGGGACGCAACA AGTTTGGTCAGCTAGGTCTTAATGATGAAAATGATAGGTATGTTCCTAATTTACTAAAGTCACTAAGATCTCAGAAAATAGTTTATATTT GTTGTGGAGAAGATCATACTGCTGCTCTAACCAAGGAAGGTGGAGTGTTTACTTTTGGAGCTGGAGGGTATGGTCAGTTGGGCCATAATT CTACCAGTCATGAAATAAACCCAAGGAAAGTTTTTGAACTTATGGGAAGCATTGTCACTGAGATTGCTTGTGGACGGCAGCACACTTCTG CTTTTGTTCCTTCATCAGGACGAATTTACTCTTTTGGGCTTGGTGGTAATGGGCAGCTGGGAACCGGTTCAACAAGCAACAGGAAAAGCC CCTTTACTGTAAAAGGAAATTGGTACCCCTATAATGGGCAGTGTCTACCAGATATTGATTCTGAAGAATATTTCTGTGTAAAAAGAATTT TCTCAGGGGGAGATCAAAGCTTTTCACATTACTCTAGTCCCCAGAACTGTGGGCCACCAGATGACTTCAGATGTCCCAATCCGACAAAGC AGATCTGGACAGTGAATGAAGCTCTAATTCAGAAATGGCTGAGCTATCCTTCTGGAAGGTTTCCTGTGGAGATAGCCAATGAGATAGATG GAACGTTTTCTTCCTCTGGTTGCCTAAATGGAAGTTTTTTAGCTGTTAGCAATGATGATCACTATAGAACAGGTACCAGATTTTCAGGGG TTGATATGAATGCTGCTAGGCTTTTATTCCACAAACTTATACAACCTGATCATCCGCAGATATCTCAGCAGGTGGCAGCTAGTTTGGAAA AGAATCTTATTCCTAAACTGACTAGCTCCTTACCTGATGTTGAAGCATTGAGGTTTTATCTTACTCTACCAGAATGTCCCCTGATGAGTG ATTCCAACAATTTCACAACAATAGCAATTCCCTTTGGTACAGCTCTTGTGAACCTAGAAAAGGCACCACTGAAAGTACTTGAAAACTGGT GGTCAGTACTTGAACCTCCACTATTCCTCAAGATAGTAGAACTTTTTAAGGAAGTTGTGGTACATCTTTTGAAACTCTACAAGATCGGTA TTCCCCCTTCTGAAAGAAGAATTTTCAACAGTTTTCTTCATACTGCATTAAAGGTTTTAGAAATACTACATAGGGGGCAAAGGACCACTA AAGCATACAACTGATGTGATCTATGCAGCGAAAATGATATCAGAATCAGGATCAAGGATGGATGTCCTTGCTCGGCAGATTGCTAATCAG TGCCCAGATCCATCTTGTAAACAGGACTTGTTGGCCTACCTGGAACAGATTAAGTTCTACTCCCACCAACTGAAAATCTGCAGTCAAGTT AAAGCTGAGATCCAGAACCTGGGAGGAGAGCTCATCATGTCAGCTTTGGACAGTGTCACATCCCTGATCCAAGCAGCCAAAAATTTAATG AATGCTGTAGTGCAAACAGTGAAAATGTCTTACATTGCCTCAACCAAGATCATCCGAATCCAGAGTCCTGCTGGGCCCCGGCACCCAGTT GTGATGTGGAGAATGAAGGCTCCTGCAAAAAAACCCTTGATTAAAAGAGAGAAGCCAGAGGAAACGTGTGCAGCTGTCAGACGAGGCTCA GCAAAGAAAAAAATCCATCCATTGCAAGTCATGAGTGAATTTAGAGGAAGACAAATCTACTGAAACCACTATTCTACATATAGTGCCTAT ATGACAAAATCCTGCCTAACCACACTGCTTTATTTTACACTTAAGAAGTTCTGTAATTTCACTAAGTTTTGGTGTTTAACTCACAAATAA CATAAAATATTGGGCGCTAAATCAACAAAAGCAATATATATTTGGGATCATATCACTGTCATTTCTGTATGGTCAGCACCTAATAGTTAA GGAATATTTGCTTGTTGAATGAATGAAATTATCACGTGTCATTCAGCGTTTCCCATCATAGAGATTATCTACTATTCGTTACCAAATAAA CACAGGAGAGGCCAGAGAGTCCTGTTTATCTGTAATACTTCATGTACACTTATCATCCTTATCTTGAATTAAAACACTAACATGAGCTCC TAACTTGGTTTTTTAATAGAAACAAAAGACTTTTATAAAATATTTTCCCATTTAATCTCCATGCTTTCTTTATCTGATCTAACCTGGCAC CTAACCAGGCAGAAATGTATGATTCCTGCCATAGCAAAAAAACCACCTTTTAATCTCTAGATAGCTGTACTCATTGTCAACTTATTAGGC TAATATCCATTATAAACTAATCAAATTTGAATAGTTAGGCTACTTGCTGGATTTTGAAGGTCAACCTTGTTTATTAATAAAATGCTTTCT TAACATTATAAAGGTTACAATGAGTTCTGATGCCACATACTCACCTTTTGGGTTTCCAATGTGTTAGAGAGTTCTGTACTTTTGAGTGTT AGGCCTATCCGAATACATATGTGAAAGAAGAGTTATCACCCATTGGGAAAATGAGACAACAAACTATATCCCAAAGTGAGTTATATTAAT AATAACAGAAGTGTAAGTTCTGTATGACCCTATTTTTACAAACATAAAAATACATTTTTATCAGCTTGCAATTGTAATTAAAAGGAAAAT GGCAGTTTGAAAAATCTTTTGACGTTGAGTAAAATATAACTGCATGAACTGTACCATTGAACTATGAAGCAGTTAATGGCAATGAAGCTG GAGTGATTTTAATAACGTTCTTTTAAATAAAAGTCACTGGGGTCATTTTACAACTCCAGTCACTGTGTTCATTCCTAGTTGAGTTCATAA TGGACTTCATAATAGTCTTAGAGTCTAGTGTACCTCTCTCTGTCATTCTCTCTCTCTTTTTCTCTCCCCTGATGACCTGCCTCTCTCTGT CTTTCAAAAATGTCCTTAACAGAAACTCTTTGGAGGCCATAAGTTTTGTTTTCATTTTTTCTCATTCATAGAGTTCTGATTCACAGACTT TAAAAAACATTTTCTATTCTACATTATCATAATAGTATTATATTGTACCTTTTTACTTCTAAAACATTGCCATTGATGAGAGGCGTCTCA GCAACGATGTAACCTTAGATTGATGAGAAAAAAATTTACACATACAATACCAGTTGATATTAGGAGAACCAGTTTGGGTAAAAGGATGCA TGAAACATAGAAAAGCATAAAGATTGACAGTACGATATGTGTGGAATCTTAAGCATAATGGTATGGGAAAAGAAGGATCTATTTAATAGG TCATTATTAATTATGCAGGAAATGTTAAATTTCTTGTAATGAATTATTTCAATCTTCCAAGTAGCTGGATTGCCTGAGCTCAGTGTAAAA CTTCCTAGGAGGTGAAGGCAATAAACTCCTCCCTGTTTTGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAG AAGAAAAGGCAGTGAAGAAGGGAATTAGGGAATTCAGATGACTCTGTTTTTCAGAATTATCTAGATGATTGAGGCAAATAGAGATTTTCT TTTATTGAAATGCTGCCATCATTTTCTGCTCTAAGTGTAGATGTTGCACGAGTGACATCTGTGGTATATCCTTCTTCCAGATAGAAGTAT AAATTTATAATTTAGTGGGGAGAGGAATTTTCTTTTAATCACCAAACTACCAGCTGTATAGAAAATTTTTTTGAAATCACCAAACTAGCA GTTGTGTATCTTAGCTCCTAAAGCCACATTCACAAGAATCATAAGCATCTCATTTAGAAAATCTAATGTCCACCGGACCCAACATCATCT TTCCACATGTTGGAGTTTAGAACATGCAGTATTGGACACCAAAAGAACAGAAATAACTTGAAATTATACAATTACCAAATAACCTCCATC TCTTTGATAAAAATGACTTTTTACCCAAAGTGAGATGTGAACAAGTTCTCCTCTTTAACCCAGGCAGATTTTCAGCTTAGCTCAAAGCAA ACTATAATTAAATAAAACAATAAAAATTTTAACTCAATGAATATCCTAGGAGTTAATCTGCTGTGGTAATCGATAGTGACATAAAAACAA GATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAGTAGGCAGCATTTCAAGATTTAGTTTGATTCAAACCTGCTG ATAAAACAAATGCTTATATGCAAGAAAAACTAGCAGCAAGATATGAATAAATCTCCCCATTATGTTAAAAACTAATCAGCATGACACATT TATATTTAGGTATTTCTTCTGCAGAGGATTGCCAGAAATTTCTTAATGAGAGTGATAATTTGGTGATCCACCTATGTACCTTTTGATGTC TCATCACAGAGATTAGTGCTTCCTCTGATAATACATTTGCTTGATCCTGCTAATAAGAACTCACCTTTCTTTTTAACGAAATCAATTTGT GTTAATTTACATAGGGAAAAACGTTCCTTGAGAGGGAGGAGAGGGGTGTTTACCACCCACAGGAGCAGTTCCATCCCTGGTTACCCACCA GTATCCCTGCCAGATGTTAGACTGGAATTAGAATGAAAATTTAAAAAAAAACGAAATAATAATCCACTAAATGGCCTTCTAATTAGAGAA ATTTGAAGATTTCTATCAAATATAAAAAGTGAGAAATAGAAATCATTCCCTTTAATTTATGACAAATTAAAATTATTGAAGTAAAATGTT TCTAAGTCAGTTTCTGGATAGTTCTTGAATGAGTCAAGAAAAAACTCAAACACTAAATTTCTAAGCTAATTTGTTCATTATTCCTTTCTG TTTATTATTTATTATATGAGTGCAAATTGCAAATGTATTAGAAAAGACAATATAGCCTTCACATTCACAAGTGTGCCTTCTGGCCTTTGA AATCTTTTAACATAAGATCAATATAACATATTTGTTCCCCATAAAAATCTCTTATGTACAGGGAATAAGGTCCTCCATAGCTACACAGAG ACACCCATTCTTGCAGTCTGGCATTCTTAACACCTTTAGCTTCAAAGGCAGTCGGTTTCAATTTCAAGCTAAAATTGTGAATATACAATT AAGTGCGCAACTTGGGCCTTCAGACCAAATAATTAATGCTCCTCAAATTAAATAATGAGTGGCTGAAAAGCCTAATGTGTAACAACAGAG TAAGTGACTTCAACGGCTTCCTGAACCTTCATTTTGAGGGTGTTCTCATCTCACCCACCTCTGGGCTAGGTATCCTCTGTTAATTGCTAA CAATTTCCTACCAAAATAGTGCAATCAGGACTGCCCATCACAGCAAATTACTCCAATTAATGCCCTTTCCTCTTCTGTGAACCAAAAATA TCTCTCTCCTGTCTCTCATCTCTATCCCAGGTATAAATTGACTAATAAATTTTACAGAGTTTTAGTCAAAATTATGAATTTTAATTTCCA GCAACATTATTCCTTTAGTCTTTCTATTCCCCAAAACATTCTTAAATTTTGGTATCAAATGTTCATTTCTGTCCTAGAGATTGTGGTTCC CATGGCTACAGATTTTTGTATAGTGGTAGTATGAGTGGAATAAGATCTGAGACTTTTCCTGGTGATATCCACCATTCTCTTGTGAACTCA TTGCAGAATAAACAGCCTCTTTCACTTTCATTGTAAGTAGTTCTTTAGGTTGGCAAAGCAGGCACCAGAATCTGAATTTGAATGAAATCT GTACTTTCTTTTGTTGGCCTATTTTTTGCCAAGACAGCCTGCCTATTGTATATTTAGGAATCAAATATTCATTTTTTCTGTTTGTAAAGC CAGAAATATTTCAGTTAAAAAGAATATAATTTTATATTATTTTAATAATTCTTTTTAAGTAAAGTAGGAAAATTTCTGCCACCTGAGATG TTACTGTTTTTATTTATATGAAAATTCCATTTTTTTCTTTATGACTCTTTTCCCATACCATTATGATATGTTCAGCATTAGTATTTTCCA TTTTACCACTAAACAAATAAGCCAGGACTAATAACAATAGCAGTTTGAGAGTTTTTATTTTGGCATTTTGGTTTTAATTAGGAAAGAAAA CATGGATGCTATTAAAACTAGTTGTAGTTAAAAATGTTTTGAATGAGGCTACTAACGCTATCTTAGTCATCTCAAAGAGAAAGAGAAGAA GTAAAATTTTAAATACCTTTTTGGCATTTTTAACCAATTCATATGAACAAAAACATATATTCTATTAAAGCAAAATAAAGAATAGTTTAA AACACTAGTCTTCTTGCATGTGAATATTTTCCCCCTAACAGACAAGATAGAATCCATTTCTGGACACTCTAAAAGAAAGTAATGTTAATT GAGAGAGCTGTCTCCAAATGGAACTCAACCTGACCAGAATCCCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTC TGAGACGAGATGCTTTATGGCTGCTGGCTGCATTATGGCATCTAGCAGTCCCCACTGGTTTGTGGGAACAAAACACATGGATTGATATTC AATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGG GTCTGAGAGGGGTAGTTGCAGAAGCATTTAGCTTTCATAGATGAGGGGAGAGTTTTTTGGTTTTATGAAGATTAGGCAGCCCTCCTGAGG AAAGTATTAAGGATAGAATGAGACACTTGTCTTGGTGGTTTGGTGAAGTCGTGTCGAAGGCAAAAGGATGAACTACACATATTTTGAGCA TGATTTAGTAATATTGTTTGCAAGTTGAGAAACAGAAATTCAGCCATTCTCCTGACTGATGGTAGGTGAAATTCTTCCCAATATTAGAGC CAATCTGGGTTACCATACGTTCATATATTTAACAGCTATTTGTTAAACAACTGTGATGTTCCAGGCACTGTTCTAGGTTCTTAGGATACA CCATATAACAAAACAAATAGTGATCCTTGCCCTCATGTGCCAGCTCTGTGTTAAATGCTAACTATTATCTTATTCAATCCTCCAAATAAC CCTATAGGATATATATCATTCCACAGACAAGGAAGCTGAGGGTTAAATGGGATAAGAATCTTGCTCAAAGTCTCACTGGCTTTAAAATAT TAATATATATTTTACATCATTCAAGACAGATATATAATTAGCTGAATATTCTCACCTCTATTAACTGAATGTAGAGTGTCAGGTACATGG GAAGTAAGTTATTTACGTGATCTGAAATAAGAGGACAACCTTTGCCAAATTACTTTTATTACCATGGAGAAGAAAGCTTCAATGAAATGC CTGTTTCAGCCCATCTTCAGTATTGGTTGGTTAATACCATTTGTTAACACCAATCCTTTCCTCTTTTACTGCTAACATGTGACTGTGTTT AAAATTATAGATTGCAGCAGAGTGTTGGCCAAGGATTATTGTAGTAGGATAAAGTTTCCCTGTATTTGAAATTTACCCAAACTGTAGCAA ATACATCTTTCCTTCTTTATGGAGGTCACACGTGTGCATAGTATGTGCCTGAATACAGGTAAACTTTGTGTTTTAAAATTACATGGCCTT TTTTAGAGTCGACTGAAGGCTAGACTCTTCTTGCCCATGTTGCTGGATAGGCTTTCAAATCTCAGGCCTTGGAGAGTTAAATGACTTTCT GATATTTCTTACGGTGGAGCCACATAAGAAATACACACATTCCTAGTTTGAGCAATGGATGTGTATATTGGGGATCTTCACTTTTATGTA TCTGGTAGTCATGATGGTGCCTATTCCCAACTGTAGGAAAGGAAAGCCCTCAAGGAGAAAATTCTCTTTCAAAAAGGCTCAGATTTCTAA CAATTATGTCTAAATGTTTCTTCAATTTAGAACATGTACAAAAGCTACTTAATATTAGCAGAGTAGTTCTTGTGTTTTCATTTCAAATGA AATATTCCCAGTTCCAAAGTTTATTTCCTTGGCATTTTCAAGAAGGATGGTTATTTTTAGTTCTGGTTATTTGGTGTTGGAGGTCTGTGA CACTTCCTTATACATTTAAAGCCCCCTTTGAATAGTTGTATCAATAGTTCAAAAGCCTGTAGATATCTTGCTTTTCTATTCTGACAGCCC AGCTTCTGCAGACTCAGGCCAACCTTAGGTATGTCACATCAGTTCCCCATCTGTGTAAATTACCTGAACCTCTCTGTGGTATTCACTGAG AGTTGAGCTTCTACTAAGGGATTTCCTTGACCTGGGCTTTTAACACCAGATTTGTAGTGGAGTGTTTATTAGTAAAGCAAAGGAGTAAGT CAGAGATGCTAGCCCCTGCTCTCAGTTAAACAGAACTATCCTCCTTCCTGAATATTTAAACATAAAATTAATTTTAAACTACTATAAAAA TCATGTTCCATTGCTTGCCAAATCTTATACCATTATAATGCTGTATTTTTACATGTTAGTATACATTGTGTCCATAGGGATATAAATATG AGAATTTCAGCAACTGTCTTGCAGGGTTAAGATGTGCTATTTGTTGATTTTGCAAATTTTTCTCATGTGGTACAGTCCCTCCAAAGAAAA TTTCCTTAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTTCCTGAAAACAGAAGTAGACATATTTTATGC CCAATTTAGTACCTAATAATTGAGGCTTAAAACAAAATTTTCTTGGGCAAGTTGGGTGATTAAATATGAATTAAAACTTCTAGAGAAAGA TTTCCAGATGCCCCTGTTTTCCATTTTGATTATGGTTTTAGTTTCATAGCAACTTGGGGGAAAAAAATCATTTACTTTATGTCGTATTAC AACAACAACTTTGACAGCTTAAATGTAGTGACCTCTCTGAAGGTAATATGCACATTATAATTTAGGATGAAAGCAGATTTAAACTAAGAC TTTCTGAGATGAAATAAAAGTAACCAATTCATAATAGTCATGTTTATTGCAGCAATATCTTGGGAACTTAAGTTTAGTGGCGTTTGAGGT GTTTCTGACTATCTTGCTTGTTCATTTCACCCTGCTCTGCAGAGACAGAATATGATTGAATGAACTGCCCATTATATTAATGACCAGTTC AAAGCAGTTTTGTGCTTTGGCTATAGATAAAATTTGGCAAAAATACTGTAGGCCTTTCTGGTCCATATTTATCCTTAAAGTATTTTTGCC AATCAATAAAAATGAAATATTTATCCAGAAATAGAAAAAGCTCTTTCCTATGACATTGACATAGAAGCCCAAATACTCCTTGTTTGAGAC CCTGCATGTCTTTTGTGTTTAACTGAATCAATGATTTTTTTTAGTTGTGCTCTTAATTGCATTATTTCACATATGTAACACTGGGTTTGT TTTGGTTATATAGTATTATTTTACTTTATTCTAATTTCAACTCATGTCACTCTGTAGCTCATTAAGAATTTGTTCAACTGAAAATTAAAA >In-frame_ENST00000395198_ENST00000433211_TCGA-BB-7861-01A_HERC4_chr10_69748420_-_CTNNA3_chr10_67748555_length(amino acids)=611AA_start in transcript=248_stop in transcript=2083 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVS CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEE YFCVKRIFSGGDQSFSHYSSPQNCGPPDDFRCPNPTKQIWTVNEALIQKWLSYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYR TGTRFSGVDMNAARLLFHKLIQPDHPQISQQVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTALVNLEKAP -------------------------------------------------------------- >In-frame_ENST00000395198_ENST00000373744_TCGA-BB-7861-01A_HERC4_chr10_69748420_-_CTNNA3_chr10_67748555_length(transcript)=2894nt_BP=2054nt AGTCTCTTCCCCAACTCTCCCCACCCCTGGTGCTCTCCGCCCCGCTTGCCTCCCGTTCTTCCCCGCCCGCTCCATCCGGGTCGCTGACGG CTGTCTCTGGACTGGACAGCAGTGGCGTCCGCTTTTCTCTAAGGAACCCGATAAGAACTCCATTTTCTGTTGATGTGGAGACATAGGGTA CCTCCAACTTTCCGGGGTTTCAGAAGAGAATTTTTTATTGAAACTGGAAGACCAAAATAATTACAAGCATGTTGTGCTGGGGAAATGCAT CCTTTGGGCAGCTAGGTTTGGGTGGAATTGATGAAGAAATTGTACTAGAGCCCAGAAAAAGTGACTTCTTTATAAATAAAAGGGTCCGAG ATGTAGGATGTGGACTCAGACATACTGTGTTTGTTCTGGATGATGGAACAGTGTACACATGTGGATGTAATGATCTAGGACAGCTAGGTC ATGAAAAATCCAGAAAGAAACCAGAGCAGGTTGTTGCCCTGGATGCCCAAAATATTGTAGCTGTTTCATGTGGAGAAGCTCATACGTTAG CGCTAAATGACAAAGGCCAGGTGTATGCTTGGGGTCTCGATTCTGATGGACAGCTTGGCCTGGTAGGATCAGAGGAATGCATCAGAGTAC CCAGAAATATTAAAAGTTTGTCAGATATCCAGATTGTACAGGTTGCTTGTGGTTACTATCATTCACTTGCACTTTCTAAAGCAAGTGAAG TCTTCTGTTGGGGACAGAATAAATATGGCCAATTGGGTTTAGGTACTGACTGTAAAAAGCAAACTTCACCGCAGCTGCTTAAGTCTTTGC TTGGAATCCCTTTCATGCAAGTTGCAGCAGGAGGAGCCCATAGTTTTGTACTCACCCTTTCTGGAGCTATCTTTGGATGGGGACGCAACA AGTTTGGTCAGCTAGGTCTTAATGATGAAAATGATAGGTATGTTCCTAATTTACTAAAGTCACTAAGATCTCAGAAAATAGTTTATATTT GTTGTGGAGAAGATCATACTGCTGCTCTAACCAAGGAAGGTGGAGTGTTTACTTTTGGAGCTGGAGGGTATGGTCAGTTGGGCCATAATT CTACCAGTCATGAAATAAACCCAAGGAAAGTTTTTGAACTTATGGGAAGCATTGTCACTGAGATTGCTTGTGGACGGCAGCACACTTCTG CTTTTGTTCCTTCATCAGGACGAATTTACTCTTTTGGGCTTGGTGGTAATGGGCAGCTGGGAACCGGTTCAACAAGCAACAGGAAAAGCC CCTTTACTGTAAAAGGAAATTGGTACCCCTATAATGGGCAGTGTCTACCAGATATTGATTCTGAAGAATATTTCTGTGTAAAAAGAATTT TCTCAGGGGGAGATCAAAGCTTTTCACATTACTCTAGTCCCCAGAACTGTGGGCCACCAGATGACTTCAGATGTCCCAATCCGACAAAGC AGATCTGGACAGTGAATGAAGCTCTAATTCAGAAATGGCTGAGCTATCCTTCTGGAAGGTTTCCTGTGGAGATAGCCAATGAGATAGATG GAACGTTTTCTTCCTCTGGTTGCCTAAATGGAAGTTTTTTAGCTGTTAGCAATGATGATCACTATAGAACAGGTACCAGATTTTCAGGGG TTGATATGAATGCTGCTAGGCTTTTATTCCACAAACTTATACAACCTGATCATCCGCAGATATCTCAGCAGGTGGCAGCTAGTTTGGAAA AGAATCTTATTCCTAAACTGACTAGCTCCTTACCTGATGTTGAAGCATTGAGGTTTTATCTTACTCTACCAGAATGTCCCCTGATGAGTG ATTCCAACAATTTCACAACAATAGCAATTCCCTTTGGTACAGCTCTTGTGAACCTAGAAAAGGCACCACTGAAAGTACTTGAAAACTGGT GGTCAGTACTTGAACCTCCACTATTCCTCAAGATAGTAGAACTTTTTAAGGAAGTTGTGGTACATCTTTTGAAACTCTACAAGATCGGTA TTCCCCCTTCTGAAAGAAGAATTTTCAACAGTTTTCTTCATACTGCATTAAAGGTTTTAGAAATACTACATAGGGGGCAAAGGACCACTA AAGCATACAACTGATGTGATCTATGCAGCGAAAATGATATCAGAATCAGGATCAAGGATGGATGTCCTTGCTCGGCAGATTGCTAATCAG TGCCCAGATCCATCTTGTAAACAGGACTTGTTGGCCTACCTGGAACAGATTAAGTTCTACTCCCACCAACTGAAAATCTGCAGTCAAGTT AAAGCTGAGATCCAGAACCTGGGAGGAGAGCTCATCATGTCAGCTTTGGACAGTGTCACATCCCTGATCCAAGCAGCCAAAAATTTAATG AATGCTGTAGTGCAAACAGTGAAAATGTCTTACATTGCCTCAACCAAGATCATCCGAATCCAGAGTCCTGCTGGGCCCCGGCACCCAGTT GTGATGTGGAGAATGAAGGCTCCTGCAAAAAAACCCTTGATTAAAAGAGAGAAGCCAGAGGAAACGTGTGCAGCTGTCAGACGAGGCTCA GCAAAGAAAAAAATCCATCCATTGCAAGTCATGAGTGAATTTAGAGGAAGACAAATCTACTGAAACCACTATTCTACATATAGTGCCTAT ATGACAAAATCCTGCCTAACCACACTGCTTTATTTTACACTTAAGAAGTTCTGTAATTTCACTAAGTTTTGGTGTTTAACTCACAAATAA CATAAAATATTGGGCGCTAAATCAACAAAAGCAATATATATTTGGGATCATATCACTGTCATTTCTGTATGGTCAGCACCTAATAGTTAA GGAATATTTGCTTGTTGAATGAATGAAATTATCACGTGTCATTCAGCGTTTCCCATCATAGAGATTATCTACTATTCGTTACCAAATAAA >In-frame_ENST00000395198_ENST00000373744_TCGA-BB-7861-01A_HERC4_chr10_69748420_-_CTNNA3_chr10_67748555_length(amino acids)=611AA_start in transcript=248_stop in transcript=2083 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVS CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEE YFCVKRIFSGGDQSFSHYSSPQNCGPPDDFRCPNPTKQIWTVNEALIQKWLSYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYR TGTRFSGVDMNAARLLFHKLIQPDHPQISQQVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTALVNLEKAP -------------------------------------------------------------- >In-frame_ENST00000373700_ENST00000433211_TCGA-BB-7861-01A_HERC4_chr10_69748420_-_CTNNA3_chr10_67748555_length(transcript)=10460nt_BP=2119nt ACTTCCGGCCAGCCCCTCCCCCGCCTCCCTCGCGTGGCCACCTCCCCCTCTGCCTTCTCCTACCCAGTCTCTTCCCCAACTCTCCCCACC CCTGGTGCTCTCCGCCCCGCTTGCCTCCCGTTCTTCCCCGCCCGCTCCATCCGGGTCGCTGACGGCTGTCTCTGGACTGGACAGCAGTGG CGTCCGCTTTTCTCTAAGGAACCCGATAAGAACTCCATTTTCTGTTGATGTGGAGACATAGGGTACCTCCAACTTTCCGGGGTTTCAGAA GAGAATTTTTTATTGAAACTGGAAGACCAAAATAATTACAAGCATGTTGTGCTGGGGAAATGCATCCTTTGGGCAGCTAGGTTTGGGTGG AATTGATGAAGAAATTGTACTAGAGCCCAGAAAAAGTGACTTCTTTATAAATAAAAGGGTCCGAGATGTAGGATGTGGACTCAGACATAC TGTGTTTGTTCTGGATGATGGAACAGTGTACACATGTGGATGTAATGATCTAGGACAGCTAGGTCATGAAAAATCCAGAAAGAAACCAGA GCAGGTTGTTGCCCTGGATGCCCAAAATATTGTAGCTGTTTCATGTGGAGAAGCTCATACGTTAGCGCTAAATGACAAAGGCCAGGTGTA TGCTTGGGGTCTCGATTCTGATGGACAGCTTGGCCTGGTAGGATCAGAGGAATGCATCAGAGTACCCAGAAATATTAAAAGTTTGTCAGA TATCCAGATTGTACAGGTTGCTTGTGGTTACTATCATTCACTTGCACTTTCTAAAGCAAGTGAAGTCTTCTGTTGGGGACAGAATAAATA TGGCCAATTGGGTTTAGGTACTGACTGTAAAAAGCAAACTTCACCGCAGCTGCTTAAGTCTTTGCTTGGAATCCCTTTCATGCAAGTTGC AGCAGGAGGAGCCCATAGTTTTGTACTCACCCTTTCTGGAGCTATCTTTGGATGGGGACGCAACAAGTTTGGTCAGCTAGGTCTTAATGA TGAAAATGATAGGTATGTTCCTAATTTACTAAAGTCACTAAGATCTCAGAAAATAGTTTATATTTGTTGTGGAGAAGATCATACTGCTGC TCTAACCAAGGAAGGTGGAGTGTTTACTTTTGGAGCTGGAGGGTATGGTCAGTTGGGCCATAATTCTACCAGTCATGAAATAAACCCAAG GAAAGTTTTTGAACTTATGGGAAGCATTGTCACTGAGATTGCTTGTGGACGGCAGCACACTTCTGCTTTTGTTCCTTCATCAGGACGAAT TTACTCTTTTGGGCTTGGTGGTAATGGGCAGCTGGGAACCGGTTCAACAAGCAACAGGAAAAGCCCCTTTACTGTAAAAGGAAATTGGTA CCCCTATAATGGGCAGTGTCTACCAGATATTGATTCTGAAGAATATTTCTGTGTAAAAAGAATTTTCTCAGGGGGAGATCAAAGCTTTTC ACATTACTCTAGTCCCCAGAACTGTGGGCCACCAGATGACTTCAGATGTCCCAATCCGACAAAGCAGATCTGGACAGTGAATGAAGCTCT AATTCAGAAATGGCTGAGCTATCCTTCTGGAAGGTTTCCTGTGGAGATAGCCAATGAGATAGATGGAACGTTTTCTTCCTCTGGTTGCCT AAATGGAAGTTTTTTAGCTGTTAGCAATGATGATCACTATAGAACAGGTACCAGATTTTCAGGGGTTGATATGAATGCTGCTAGGCTTTT ATTCCACAAACTTATACAACCTGATCATCCGCAGATATCTCAGCAGGTGGCAGCTAGTTTGGAAAAGAATCTTATTCCTAAACTGACTAG CTCCTTACCTGATGTTGAAGCATTGAGGTTTTATCTTACTCTACCAGAATGTCCCCTGATGAGTGATTCCAACAATTTCACAACAATAGC AATTCCCTTTGGTACAGCTCTTGTGAACCTAGAAAAGGCACCACTGAAAGTACTTGAAAACTGGTGGTCAGTACTTGAACCTCCACTATT CCTCAAGATAGTAGAACTTTTTAAGGAAGTTGTGGTACATCTTTTGAAACTCTACAAGATCGGTATTCCCCCTTCTGAAAGAAGAATTTT CAACAGTTTTCTTCATACTGCATTAAAGGTTTTAGAAATACTACATAGGGGGCAAAGGACCACTAAAGCATACAACTGATGTGATCTATG CAGCGAAAATGATATCAGAATCAGGATCAAGGATGGATGTCCTTGCTCGGCAGATTGCTAATCAGTGCCCAGATCCATCTTGTAAACAGG ACTTGTTGGCCTACCTGGAACAGATTAAGTTCTACTCCCACCAACTGAAAATCTGCAGTCAAGTTAAAGCTGAGATCCAGAACCTGGGAG GAGAGCTCATCATGTCAGCTTTGGACAGTGTCACATCCCTGATCCAAGCAGCCAAAAATTTAATGAATGCTGTAGTGCAAACAGTGAAAA TGTCTTACATTGCCTCAACCAAGATCATCCGAATCCAGAGTCCTGCTGGGCCCCGGCACCCAGTTGTGATGTGGAGAATGAAGGCTCCTG CAAAAAAACCCTTGATTAAAAGAGAGAAGCCAGAGGAAACGTGTGCAGCTGTCAGACGAGGCTCAGCAAAGAAAAAAATCCATCCATTGC AAGTCATGAGTGAATTTAGAGGAAGACAAATCTACTGAAACCACTATTCTACATATAGTGCCTATATGACAAAATCCTGCCTAACCACAC TGCTTTATTTTACACTTAAGAAGTTCTGTAATTTCACTAAGTTTTGGTGTTTAACTCACAAATAACATAAAATATTGGGCGCTAAATCAA CAAAAGCAATATATATTTGGGATCATATCACTGTCATTTCTGTATGGTCAGCACCTAATAGTTAAGGAATATTTGCTTGTTGAATGAATG AAATTATCACGTGTCATTCAGCGTTTCCCATCATAGAGATTATCTACTATTCGTTACCAAATAAACACAGGAGAGGCCAGAGAGTCCTGT TTATCTGTAATACTTCATGTACACTTATCATCCTTATCTTGAATTAAAACACTAACATGAGCTCCTAACTTGGTTTTTTAATAGAAACAA AAGACTTTTATAAAATATTTTCCCATTTAATCTCCATGCTTTCTTTATCTGATCTAACCTGGCACCTAACCAGGCAGAAATGTATGATTC CTGCCATAGCAAAAAAACCACCTTTTAATCTCTAGATAGCTGTACTCATTGTCAACTTATTAGGCTAATATCCATTATAAACTAATCAAA TTTGAATAGTTAGGCTACTTGCTGGATTTTGAAGGTCAACCTTGTTTATTAATAAAATGCTTTCTTAACATTATAAAGGTTACAATGAGT TCTGATGCCACATACTCACCTTTTGGGTTTCCAATGTGTTAGAGAGTTCTGTACTTTTGAGTGTTAGGCCTATCCGAATACATATGTGAA AGAAGAGTTATCACCCATTGGGAAAATGAGACAACAAACTATATCCCAAAGTGAGTTATATTAATAATAACAGAAGTGTAAGTTCTGTAT GACCCTATTTTTACAAACATAAAAATACATTTTTATCAGCTTGCAATTGTAATTAAAAGGAAAATGGCAGTTTGAAAAATCTTTTGACGT TGAGTAAAATATAACTGCATGAACTGTACCATTGAACTATGAAGCAGTTAATGGCAATGAAGCTGGAGTGATTTTAATAACGTTCTTTTA AATAAAAGTCACTGGGGTCATTTTACAACTCCAGTCACTGTGTTCATTCCTAGTTGAGTTCATAATGGACTTCATAATAGTCTTAGAGTC TAGTGTACCTCTCTCTGTCATTCTCTCTCTCTTTTTCTCTCCCCTGATGACCTGCCTCTCTCTGTCTTTCAAAAATGTCCTTAACAGAAA CTCTTTGGAGGCCATAAGTTTTGTTTTCATTTTTTCTCATTCATAGAGTTCTGATTCACAGACTTTAAAAAACATTTTCTATTCTACATT ATCATAATAGTATTATATTGTACCTTTTTACTTCTAAAACATTGCCATTGATGAGAGGCGTCTCAGCAACGATGTAACCTTAGATTGATG AGAAAAAAATTTACACATACAATACCAGTTGATATTAGGAGAACCAGTTTGGGTAAAAGGATGCATGAAACATAGAAAAGCATAAAGATT GACAGTACGATATGTGTGGAATCTTAAGCATAATGGTATGGGAAAAGAAGGATCTATTTAATAGGTCATTATTAATTATGCAGGAAATGT TAAATTTCTTGTAATGAATTATTTCAATCTTCCAAGTAGCTGGATTGCCTGAGCTCAGTGTAAAACTTCCTAGGAGGTGAAGGCAATAAA CTCCTCCCTGTTTTGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAGAAGAAAAGGCAGTGAAGAAGGGAAT TAGGGAATTCAGATGACTCTGTTTTTCAGAATTATCTAGATGATTGAGGCAAATAGAGATTTTCTTTTATTGAAATGCTGCCATCATTTT CTGCTCTAAGTGTAGATGTTGCACGAGTGACATCTGTGGTATATCCTTCTTCCAGATAGAAGTATAAATTTATAATTTAGTGGGGAGAGG AATTTTCTTTTAATCACCAAACTACCAGCTGTATAGAAAATTTTTTTGAAATCACCAAACTAGCAGTTGTGTATCTTAGCTCCTAAAGCC ACATTCACAAGAATCATAAGCATCTCATTTAGAAAATCTAATGTCCACCGGACCCAACATCATCTTTCCACATGTTGGAGTTTAGAACAT GCAGTATTGGACACCAAAAGAACAGAAATAACTTGAAATTATACAATTACCAAATAACCTCCATCTCTTTGATAAAAATGACTTTTTACC CAAAGTGAGATGTGAACAAGTTCTCCTCTTTAACCCAGGCAGATTTTCAGCTTAGCTCAAAGCAAACTATAATTAAATAAAACAATAAAA ATTTTAACTCAATGAATATCCTAGGAGTTAATCTGCTGTGGTAATCGATAGTGACATAAAAACAAGATGCATAGAGCTGAAAAAGGCATC TGTCCACCTGAGTGAATTCCTGTAGTAGGCAGCATTTCAAGATTTAGTTTGATTCAAACCTGCTGATAAAACAAATGCTTATATGCAAGA AAAACTAGCAGCAAGATATGAATAAATCTCCCCATTATGTTAAAAACTAATCAGCATGACACATTTATATTTAGGTATTTCTTCTGCAGA GGATTGCCAGAAATTTCTTAATGAGAGTGATAATTTGGTGATCCACCTATGTACCTTTTGATGTCTCATCACAGAGATTAGTGCTTCCTC TGATAATACATTTGCTTGATCCTGCTAATAAGAACTCACCTTTCTTTTTAACGAAATCAATTTGTGTTAATTTACATAGGGAAAAACGTT CCTTGAGAGGGAGGAGAGGGGTGTTTACCACCCACAGGAGCAGTTCCATCCCTGGTTACCCACCAGTATCCCTGCCAGATGTTAGACTGG AATTAGAATGAAAATTTAAAAAAAAACGAAATAATAATCCACTAAATGGCCTTCTAATTAGAGAAATTTGAAGATTTCTATCAAATATAA AAAGTGAGAAATAGAAATCATTCCCTTTAATTTATGACAAATTAAAATTATTGAAGTAAAATGTTTCTAAGTCAGTTTCTGGATAGTTCT TGAATGAGTCAAGAAAAAACTCAAACACTAAATTTCTAAGCTAATTTGTTCATTATTCCTTTCTGTTTATTATTTATTATATGAGTGCAA ATTGCAAATGTATTAGAAAAGACAATATAGCCTTCACATTCACAAGTGTGCCTTCTGGCCTTTGAAATCTTTTAACATAAGATCAATATA ACATATTTGTTCCCCATAAAAATCTCTTATGTACAGGGAATAAGGTCCTCCATAGCTACACAGAGACACCCATTCTTGCAGTCTGGCATT CTTAACACCTTTAGCTTCAAAGGCAGTCGGTTTCAATTTCAAGCTAAAATTGTGAATATACAATTAAGTGCGCAACTTGGGCCTTCAGAC CAAATAATTAATGCTCCTCAAATTAAATAATGAGTGGCTGAAAAGCCTAATGTGTAACAACAGAGTAAGTGACTTCAACGGCTTCCTGAA CCTTCATTTTGAGGGTGTTCTCATCTCACCCACCTCTGGGCTAGGTATCCTCTGTTAATTGCTAACAATTTCCTACCAAAATAGTGCAAT CAGGACTGCCCATCACAGCAAATTACTCCAATTAATGCCCTTTCCTCTTCTGTGAACCAAAAATATCTCTCTCCTGTCTCTCATCTCTAT CCCAGGTATAAATTGACTAATAAATTTTACAGAGTTTTAGTCAAAATTATGAATTTTAATTTCCAGCAACATTATTCCTTTAGTCTTTCT ATTCCCCAAAACATTCTTAAATTTTGGTATCAAATGTTCATTTCTGTCCTAGAGATTGTGGTTCCCATGGCTACAGATTTTTGTATAGTG GTAGTATGAGTGGAATAAGATCTGAGACTTTTCCTGGTGATATCCACCATTCTCTTGTGAACTCATTGCAGAATAAACAGCCTCTTTCAC TTTCATTGTAAGTAGTTCTTTAGGTTGGCAAAGCAGGCACCAGAATCTGAATTTGAATGAAATCTGTACTTTCTTTTGTTGGCCTATTTT TTGCCAAGACAGCCTGCCTATTGTATATTTAGGAATCAAATATTCATTTTTTCTGTTTGTAAAGCCAGAAATATTTCAGTTAAAAAGAAT ATAATTTTATATTATTTTAATAATTCTTTTTAAGTAAAGTAGGAAAATTTCTGCCACCTGAGATGTTACTGTTTTTATTTATATGAAAAT TCCATTTTTTTCTTTATGACTCTTTTCCCATACCATTATGATATGTTCAGCATTAGTATTTTCCATTTTACCACTAAACAAATAAGCCAG GACTAATAACAATAGCAGTTTGAGAGTTTTTATTTTGGCATTTTGGTTTTAATTAGGAAAGAAAACATGGATGCTATTAAAACTAGTTGT AGTTAAAAATGTTTTGAATGAGGCTACTAACGCTATCTTAGTCATCTCAAAGAGAAAGAGAAGAAGTAAAATTTTAAATACCTTTTTGGC ATTTTTAACCAATTCATATGAACAAAAACATATATTCTATTAAAGCAAAATAAAGAATAGTTTAAAACACTAGTCTTCTTGCATGTGAAT ATTTTCCCCCTAACAGACAAGATAGAATCCATTTCTGGACACTCTAAAAGAAAGTAATGTTAATTGAGAGAGCTGTCTCCAAATGGAACT CAACCTGACCAGAATCCCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGACGAGATGCTTTATGGCTGCT GGCTGCATTATGGCATCTAGCAGTCCCCACTGGTTTGTGGGAACAAAACACATGGATTGATATTCAATATGAGTTTGGTAAGTTGGAGAA AAATGGAGACGATACGGAGTAGTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGGGGTAGTTGCAGAAGC ATTTAGCTTTCATAGATGAGGGGAGAGTTTTTTGGTTTTATGAAGATTAGGCAGCCCTCCTGAGGAAAGTATTAAGGATAGAATGAGACA CTTGTCTTGGTGGTTTGGTGAAGTCGTGTCGAAGGCAAAAGGATGAACTACACATATTTTGAGCATGATTTAGTAATATTGTTTGCAAGT TGAGAAACAGAAATTCAGCCATTCTCCTGACTGATGGTAGGTGAAATTCTTCCCAATATTAGAGCCAATCTGGGTTACCATACGTTCATA TATTTAACAGCTATTTGTTAAACAACTGTGATGTTCCAGGCACTGTTCTAGGTTCTTAGGATACACCATATAACAAAACAAATAGTGATC CTTGCCCTCATGTGCCAGCTCTGTGTTAAATGCTAACTATTATCTTATTCAATCCTCCAAATAACCCTATAGGATATATATCATTCCACA GACAAGGAAGCTGAGGGTTAAATGGGATAAGAATCTTGCTCAAAGTCTCACTGGCTTTAAAATATTAATATATATTTTACATCATTCAAG ACAGATATATAATTAGCTGAATATTCTCACCTCTATTAACTGAATGTAGAGTGTCAGGTACATGGGAAGTAAGTTATTTACGTGATCTGA AATAAGAGGACAACCTTTGCCAAATTACTTTTATTACCATGGAGAAGAAAGCTTCAATGAAATGCCTGTTTCAGCCCATCTTCAGTATTG GTTGGTTAATACCATTTGTTAACACCAATCCTTTCCTCTTTTACTGCTAACATGTGACTGTGTTTAAAATTATAGATTGCAGCAGAGTGT TGGCCAAGGATTATTGTAGTAGGATAAAGTTTCCCTGTATTTGAAATTTACCCAAACTGTAGCAAATACATCTTTCCTTCTTTATGGAGG TCACACGTGTGCATAGTATGTGCCTGAATACAGGTAAACTTTGTGTTTTAAAATTACATGGCCTTTTTTAGAGTCGACTGAAGGCTAGAC TCTTCTTGCCCATGTTGCTGGATAGGCTTTCAAATCTCAGGCCTTGGAGAGTTAAATGACTTTCTGATATTTCTTACGGTGGAGCCACAT AAGAAATACACACATTCCTAGTTTGAGCAATGGATGTGTATATTGGGGATCTTCACTTTTATGTATCTGGTAGTCATGATGGTGCCTATT CCCAACTGTAGGAAAGGAAAGCCCTCAAGGAGAAAATTCTCTTTCAAAAAGGCTCAGATTTCTAACAATTATGTCTAAATGTTTCTTCAA TTTAGAACATGTACAAAAGCTACTTAATATTAGCAGAGTAGTTCTTGTGTTTTCATTTCAAATGAAATATTCCCAGTTCCAAAGTTTATT TCCTTGGCATTTTCAAGAAGGATGGTTATTTTTAGTTCTGGTTATTTGGTGTTGGAGGTCTGTGACACTTCCTTATACATTTAAAGCCCC CTTTGAATAGTTGTATCAATAGTTCAAAAGCCTGTAGATATCTTGCTTTTCTATTCTGACAGCCCAGCTTCTGCAGACTCAGGCCAACCT TAGGTATGTCACATCAGTTCCCCATCTGTGTAAATTACCTGAACCTCTCTGTGGTATTCACTGAGAGTTGAGCTTCTACTAAGGGATTTC CTTGACCTGGGCTTTTAACACCAGATTTGTAGTGGAGTGTTTATTAGTAAAGCAAAGGAGTAAGTCAGAGATGCTAGCCCCTGCTCTCAG TTAAACAGAACTATCCTCCTTCCTGAATATTTAAACATAAAATTAATTTTAAACTACTATAAAAATCATGTTCCATTGCTTGCCAAATCT TATACCATTATAATGCTGTATTTTTACATGTTAGTATACATTGTGTCCATAGGGATATAAATATGAGAATTTCAGCAACTGTCTTGCAGG GTTAAGATGTGCTATTTGTTGATTTTGCAAATTTTTCTCATGTGGTACAGTCCCTCCAAAGAAAATTTCCTTAGACCTAAATGGTAGCAT AATAATTTCTCCTCCATATCCGTGACTAACAAGTTCCTGAAAACAGAAGTAGACATATTTTATGCCCAATTTAGTACCTAATAATTGAGG CTTAAAACAAAATTTTCTTGGGCAAGTTGGGTGATTAAATATGAATTAAAACTTCTAGAGAAAGATTTCCAGATGCCCCTGTTTTCCATT TTGATTATGGTTTTAGTTTCATAGCAACTTGGGGGAAAAAAATCATTTACTTTATGTCGTATTACAACAACAACTTTGACAGCTTAAATG TAGTGACCTCTCTGAAGGTAATATGCACATTATAATTTAGGATGAAAGCAGATTTAAACTAAGACTTTCTGAGATGAAATAAAAGTAACC AATTCATAATAGTCATGTTTATTGCAGCAATATCTTGGGAACTTAAGTTTAGTGGCGTTTGAGGTGTTTCTGACTATCTTGCTTGTTCAT TTCACCCTGCTCTGCAGAGACAGAATATGATTGAATGAACTGCCCATTATATTAATGACCAGTTCAAAGCAGTTTTGTGCTTTGGCTATA GATAAAATTTGGCAAAAATACTGTAGGCCTTTCTGGTCCATATTTATCCTTAAAGTATTTTTGCCAATCAATAAAAATGAAATATTTATC CAGAAATAGAAAAAGCTCTTTCCTATGACATTGACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAACTG AATCAATGATTTTTTTTAGTTGTGCTCTTAATTGCATTATTTCACATATGTAACACTGGGTTTGTTTTGGTTATATAGTATTATTTTACT TTATTCTAATTTCAACTCATGTCACTCTGTAGCTCATTAAGAATTTGTTCAACTGAAAATTAAAATGTGTGTTAAAGCAATAAAAATGAA >In-frame_ENST00000373700_ENST00000433211_TCGA-BB-7861-01A_HERC4_chr10_69748420_-_CTNNA3_chr10_67748555_length(amino acids)=611AA_start in transcript=313_stop in transcript=2148 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVS CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEE YFCVKRIFSGGDQSFSHYSSPQNCGPPDDFRCPNPTKQIWTVNEALIQKWLSYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYR TGTRFSGVDMNAARLLFHKLIQPDHPQISQQVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTALVNLEKAP -------------------------------------------------------------- >In-frame_ENST00000373700_ENST00000373744_TCGA-BB-7861-01A_HERC4_chr10_69748420_-_CTNNA3_chr10_67748555_length(transcript)=2959nt_BP=2119nt ACTTCCGGCCAGCCCCTCCCCCGCCTCCCTCGCGTGGCCACCTCCCCCTCTGCCTTCTCCTACCCAGTCTCTTCCCCAACTCTCCCCACC CCTGGTGCTCTCCGCCCCGCTTGCCTCCCGTTCTTCCCCGCCCGCTCCATCCGGGTCGCTGACGGCTGTCTCTGGACTGGACAGCAGTGG CGTCCGCTTTTCTCTAAGGAACCCGATAAGAACTCCATTTTCTGTTGATGTGGAGACATAGGGTACCTCCAACTTTCCGGGGTTTCAGAA GAGAATTTTTTATTGAAACTGGAAGACCAAAATAATTACAAGCATGTTGTGCTGGGGAAATGCATCCTTTGGGCAGCTAGGTTTGGGTGG AATTGATGAAGAAATTGTACTAGAGCCCAGAAAAAGTGACTTCTTTATAAATAAAAGGGTCCGAGATGTAGGATGTGGACTCAGACATAC TGTGTTTGTTCTGGATGATGGAACAGTGTACACATGTGGATGTAATGATCTAGGACAGCTAGGTCATGAAAAATCCAGAAAGAAACCAGA GCAGGTTGTTGCCCTGGATGCCCAAAATATTGTAGCTGTTTCATGTGGAGAAGCTCATACGTTAGCGCTAAATGACAAAGGCCAGGTGTA TGCTTGGGGTCTCGATTCTGATGGACAGCTTGGCCTGGTAGGATCAGAGGAATGCATCAGAGTACCCAGAAATATTAAAAGTTTGTCAGA TATCCAGATTGTACAGGTTGCTTGTGGTTACTATCATTCACTTGCACTTTCTAAAGCAAGTGAAGTCTTCTGTTGGGGACAGAATAAATA TGGCCAATTGGGTTTAGGTACTGACTGTAAAAAGCAAACTTCACCGCAGCTGCTTAAGTCTTTGCTTGGAATCCCTTTCATGCAAGTTGC AGCAGGAGGAGCCCATAGTTTTGTACTCACCCTTTCTGGAGCTATCTTTGGATGGGGACGCAACAAGTTTGGTCAGCTAGGTCTTAATGA TGAAAATGATAGGTATGTTCCTAATTTACTAAAGTCACTAAGATCTCAGAAAATAGTTTATATTTGTTGTGGAGAAGATCATACTGCTGC TCTAACCAAGGAAGGTGGAGTGTTTACTTTTGGAGCTGGAGGGTATGGTCAGTTGGGCCATAATTCTACCAGTCATGAAATAAACCCAAG GAAAGTTTTTGAACTTATGGGAAGCATTGTCACTGAGATTGCTTGTGGACGGCAGCACACTTCTGCTTTTGTTCCTTCATCAGGACGAAT TTACTCTTTTGGGCTTGGTGGTAATGGGCAGCTGGGAACCGGTTCAACAAGCAACAGGAAAAGCCCCTTTACTGTAAAAGGAAATTGGTA CCCCTATAATGGGCAGTGTCTACCAGATATTGATTCTGAAGAATATTTCTGTGTAAAAAGAATTTTCTCAGGGGGAGATCAAAGCTTTTC ACATTACTCTAGTCCCCAGAACTGTGGGCCACCAGATGACTTCAGATGTCCCAATCCGACAAAGCAGATCTGGACAGTGAATGAAGCTCT AATTCAGAAATGGCTGAGCTATCCTTCTGGAAGGTTTCCTGTGGAGATAGCCAATGAGATAGATGGAACGTTTTCTTCCTCTGGTTGCCT AAATGGAAGTTTTTTAGCTGTTAGCAATGATGATCACTATAGAACAGGTACCAGATTTTCAGGGGTTGATATGAATGCTGCTAGGCTTTT ATTCCACAAACTTATACAACCTGATCATCCGCAGATATCTCAGCAGGTGGCAGCTAGTTTGGAAAAGAATCTTATTCCTAAACTGACTAG CTCCTTACCTGATGTTGAAGCATTGAGGTTTTATCTTACTCTACCAGAATGTCCCCTGATGAGTGATTCCAACAATTTCACAACAATAGC AATTCCCTTTGGTACAGCTCTTGTGAACCTAGAAAAGGCACCACTGAAAGTACTTGAAAACTGGTGGTCAGTACTTGAACCTCCACTATT CCTCAAGATAGTAGAACTTTTTAAGGAAGTTGTGGTACATCTTTTGAAACTCTACAAGATCGGTATTCCCCCTTCTGAAAGAAGAATTTT CAACAGTTTTCTTCATACTGCATTAAAGGTTTTAGAAATACTACATAGGGGGCAAAGGACCACTAAAGCATACAACTGATGTGATCTATG CAGCGAAAATGATATCAGAATCAGGATCAAGGATGGATGTCCTTGCTCGGCAGATTGCTAATCAGTGCCCAGATCCATCTTGTAAACAGG ACTTGTTGGCCTACCTGGAACAGATTAAGTTCTACTCCCACCAACTGAAAATCTGCAGTCAAGTTAAAGCTGAGATCCAGAACCTGGGAG GAGAGCTCATCATGTCAGCTTTGGACAGTGTCACATCCCTGATCCAAGCAGCCAAAAATTTAATGAATGCTGTAGTGCAAACAGTGAAAA TGTCTTACATTGCCTCAACCAAGATCATCCGAATCCAGAGTCCTGCTGGGCCCCGGCACCCAGTTGTGATGTGGAGAATGAAGGCTCCTG CAAAAAAACCCTTGATTAAAAGAGAGAAGCCAGAGGAAACGTGTGCAGCTGTCAGACGAGGCTCAGCAAAGAAAAAAATCCATCCATTGC AAGTCATGAGTGAATTTAGAGGAAGACAAATCTACTGAAACCACTATTCTACATATAGTGCCTATATGACAAAATCCTGCCTAACCACAC TGCTTTATTTTACACTTAAGAAGTTCTGTAATTTCACTAAGTTTTGGTGTTTAACTCACAAATAACATAAAATATTGGGCGCTAAATCAA CAAAAGCAATATATATTTGGGATCATATCACTGTCATTTCTGTATGGTCAGCACCTAATAGTTAAGGAATATTTGCTTGTTGAATGAATG >In-frame_ENST00000373700_ENST00000373744_TCGA-BB-7861-01A_HERC4_chr10_69748420_-_CTNNA3_chr10_67748555_length(amino acids)=611AA_start in transcript=313_stop in transcript=2148 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVS CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEE YFCVKRIFSGGDQSFSHYSSPQNCGPPDDFRCPNPTKQIWTVNEALIQKWLSYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYR TGTRFSGVDMNAARLLFHKLIQPDHPQISQQVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTALVNLEKAP -------------------------------------------------------------- |
Top |
Fusion Gene PPI Analysis for HERC4-CTNNA3 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
Related Drugs for HERC4-CTNNA3 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
Related Diseases for HERC4-CTNNA3 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | CTNNA3 | C0004096 | Asthma | 1 | CTD_human |
Tgene | CTNNA3 | C0013146 | Drug abuse | 1 | CTD_human |
Tgene | CTNNA3 | C0013170 | Drug habituation | 1 | CTD_human |
Tgene | CTNNA3 | C0013222 | Drug Use Disorders | 1 | CTD_human |
Tgene | CTNNA3 | C0029231 | Organic Mental Disorders, Substance-Induced | 1 | CTD_human |
Tgene | CTNNA3 | C0038580 | Substance Dependence | 1 | CTD_human |
Tgene | CTNNA3 | C0038586 | Substance Use Disorders | 1 | CTD_human |
Tgene | CTNNA3 | C0236969 | Substance-Related Disorders | 1 | CTD_human |
Tgene | CTNNA3 | C0740858 | Substance abuse problem | 1 | CTD_human |
Tgene | CTNNA3 | C1510472 | Drug Dependence | 1 | CTD_human |
Tgene | CTNNA3 | C1832931 | ARRHYTHMOGENIC RIGHT VENTRICULAR DYSPLASIA, FAMILIAL, 2 | 1 | ORPHANET |
Tgene | CTNNA3 | C3810138 | ARRHYTHMOGENIC RIGHT VENTRICULAR DYSPLASIA, FAMILIAL, 13 | 1 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
Tgene | CTNNA3 | C4316881 | Prescription Drug Abuse | 1 | CTD_human |