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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:HEYL-MORC4 (FusionGDB2 ID:36095)

Fusion Gene Summary for HEYL-MORC4

check button Fusion gene summary
Fusion gene informationFusion gene name: HEYL-MORC4
Fusion gene ID: 36095
HgeneTgene
Gene symbol

HEYL

MORC4

Gene ID

26508

79710

Gene namehes related family bHLH transcription factor with YRPW motif likeMORC family CW-type zinc finger 4
SynonymsHESR3|HEY3|HRT3|bHLHb33ZCW4|ZCWCC2|dJ75H8.2
Cytomap

1p34.2

Xq22.3

Type of geneprotein-codingprotein-coding
Descriptionhairy/enhancer-of-split related with YRPW motif-like proteinHEY-like proteinHRT-3class B basic helix-loop-helix protein 33hHRT3hHeyLhairy-related transcription factor 3hairy/enhancer-of-split related with YRPW motif 3MORC family CW-type zinc finger protein 4zinc finger CW-type coiled-coil domain protein 2zinc finger CW-type domain protein 4zinc finger, CW type with coiled-coil domain 2
Modification date2020031320200322
UniProtAcc

Q9NQ87

Q8TE76

Ensembl transtripts involved in fusion geneENST00000372852, ENST00000535435, 
ENST00000355610, ENST00000535534, 
ENST00000255495, 
Fusion gene scores* DoF score3 X 4 X 2=242 X 2 X 1=4
# samples 42
** MAII scorelog2(4/24*10)=0.736965594166206
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
log2(2/4*10)=2.32192809488736
Context

PubMed: HEYL [Title/Abstract] AND MORC4 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointHEYL(40095907)-MORC4(106185927), # samples:1
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneHEYL

GO:0007219

Notch signaling pathway

10964718

HgeneHEYL

GO:0043433

negative regulation of DNA-binding transcription factor activity

21454491

HgeneHEYL

GO:0045892

negative regulation of transcription, DNA-templated

15485867|21454491

HgeneHEYL

GO:0045944

positive regulation of transcription by RNA polymerase II

21290414

HgeneHEYL

GO:0060766

negative regulation of androgen receptor signaling pathway

21454491


check buttonFusion gene breakpoints across HEYL (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonFusion gene breakpoints across MORC4 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChiTaRS5.0N/ABI058396HEYLchr1

40095907

-MORC4chrX

106185927

+


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Fusion Gene ORF analysis for HEYL-MORC4

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
intron-3CDSENST00000372852ENST00000355610HEYLchr1

40095907

-MORC4chrX

106185927

+
intron-3CDSENST00000372852ENST00000535534HEYLchr1

40095907

-MORC4chrX

106185927

+
intron-3CDSENST00000372852ENST00000255495HEYLchr1

40095907

-MORC4chrX

106185927

+
intron-3CDSENST00000535435ENST00000355610HEYLchr1

40095907

-MORC4chrX

106185927

+
intron-3CDSENST00000535435ENST00000535534HEYLchr1

40095907

-MORC4chrX

106185927

+
intron-3CDSENST00000535435ENST00000255495HEYLchr1

40095907

-MORC4chrX

106185927

+

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score

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Fusion Genomic Features for HEYL-MORC4


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for HEYL-MORC4


check button Go to

FGviewer for the breakpoints of :-:

.
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
HEYL

Q9NQ87

MORC4

Q8TE76

FUNCTION: Downstream effector of Notch signaling which may be required for cardiovascular development (By similarity). Transcriptional repressor which binds preferentially to the canonical E box sequence 5'-CACGTG-3' (By similarity). Represses transcription by the cardiac transcriptional activators GATA4 and GATA6. {ECO:0000250, ECO:0000269|PubMed:15485867}.FUNCTION: Histone methylation reader which binds to non-methylated (H3K4me0), monomethylated (H3K4me1), dimethylated (H3K4me2) and trimethylated (H3K4me3) 'Lys-4' on histone H3 (PubMed:26933034). The order of binding preference is H3K4me3 > H3K4me2 > H3K4me1 > H3K4me0 (PubMed:26933034). {ECO:0000269|PubMed:26933034}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


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Fusion Gene Sequence for HEYL-MORC4


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.

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Fusion Gene PPI Analysis for HEYL-MORC4


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for HEYL-MORC4


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for HEYL-MORC4


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneHEYLC0006142Malignant neoplasm of breast1CTD_human
HgeneHEYLC0678222Breast Carcinoma1CTD_human
HgeneHEYLC1257931Mammary Neoplasms, Human1CTD_human
HgeneHEYLC1458155Mammary Neoplasms1CTD_human
HgeneHEYLC4704874Mammary Carcinoma, Human1CTD_human