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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:HLTF-WWTR1 (FusionGDB2 ID:36603) |
Fusion Gene Summary for HLTF-WWTR1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: HLTF-WWTR1 | Fusion gene ID: 36603 | Hgene | Tgene | Gene symbol | HLTF | WWTR1 | Gene ID | 6596 | 25937 |
Gene name | helicase like transcription factor | WW domain containing transcription regulator 1 | |
Synonyms | HIP116|HIP116A|HLTF1|RNF80|SMARCA3|SNF2L3|ZBU1 | TAZ | |
Cytomap | 3q24 | 3q25.1 | |
Type of gene | protein-coding | protein-coding | |
Description | helicase-like transcription factorDNA-binding protein/plasminogen activator inhibitor-1 regulatorRING finger protein 80RING-type E3 ubiquitin transferase HLTFSNF2-like 3SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfa | WW domain-containing transcription regulator protein 1transcriptional co-activator with PDZ-binding motif | |
Modification date | 20200322 | 20200313 | |
UniProtAcc | Q14527 | . | |
Ensembl transtripts involved in fusion gene | ENST00000465259, ENST00000310053, ENST00000392912, ENST00000494055, ENST00000481663, | ENST00000465804, ENST00000360632, ENST00000467467, ENST00000474080, | |
Fusion gene scores | * DoF score | 6 X 7 X 4=168 | 10 X 8 X 9=720 |
# samples | 7 | 13 | |
** MAII score | log2(7/168*10)=-1.26303440583379 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(13/720*10)=-2.46948528330122 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: HLTF [Title/Abstract] AND WWTR1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | HLTF(148756836)-WWTR1(149237006), # samples:1 HLTF(148777505)-WWTR1(149260324), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | WWTR1 | GO:0008284 | positive regulation of cell proliferation | 18227151 |
Tgene | WWTR1 | GO:0010718 | positive regulation of epithelial to mesenchymal transition | 18227151 |
Tgene | WWTR1 | GO:0017145 | stem cell division | 18568018 |
Tgene | WWTR1 | GO:0035329 | hippo signaling | 18227151|20412773 |
Tgene | WWTR1 | GO:0060390 | regulation of SMAD protein signal transduction | 18568018 |
Fusion gene breakpoints across HLTF (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across WWTR1 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | OV | TCGA-13-A5FT-01A | HLTF | chr3 | 148756836 | - | WWTR1 | chr3 | 149237006 | - |
ChimerDB4 | LIHC | TCGA-PD-A5DF-01A | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - |
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Fusion Gene ORF analysis for HLTF-WWTR1 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-3UTR | ENST00000465259 | ENST00000465804 | HLTF | chr3 | 148756836 | - | WWTR1 | chr3 | 149237006 | - |
5CDS-intron | ENST00000465259 | ENST00000360632 | HLTF | chr3 | 148756836 | - | WWTR1 | chr3 | 149237006 | - |
5CDS-intron | ENST00000465259 | ENST00000467467 | HLTF | chr3 | 148756836 | - | WWTR1 | chr3 | 149237006 | - |
5CDS-intron | ENST00000465259 | ENST00000474080 | HLTF | chr3 | 148756836 | - | WWTR1 | chr3 | 149237006 | - |
5CDS-3UTR | ENST00000310053 | ENST00000465804 | HLTF | chr3 | 148756836 | - | WWTR1 | chr3 | 149237006 | - |
5CDS-intron | ENST00000310053 | ENST00000360632 | HLTF | chr3 | 148756836 | - | WWTR1 | chr3 | 149237006 | - |
5CDS-intron | ENST00000310053 | ENST00000467467 | HLTF | chr3 | 148756836 | - | WWTR1 | chr3 | 149237006 | - |
5CDS-intron | ENST00000310053 | ENST00000474080 | HLTF | chr3 | 148756836 | - | WWTR1 | chr3 | 149237006 | - |
5CDS-3UTR | ENST00000392912 | ENST00000465804 | HLTF | chr3 | 148756836 | - | WWTR1 | chr3 | 149237006 | - |
5CDS-intron | ENST00000392912 | ENST00000360632 | HLTF | chr3 | 148756836 | - | WWTR1 | chr3 | 149237006 | - |
5CDS-intron | ENST00000392912 | ENST00000467467 | HLTF | chr3 | 148756836 | - | WWTR1 | chr3 | 149237006 | - |
5CDS-intron | ENST00000392912 | ENST00000474080 | HLTF | chr3 | 148756836 | - | WWTR1 | chr3 | 149237006 | - |
5CDS-3UTR | ENST00000494055 | ENST00000465804 | HLTF | chr3 | 148756836 | - | WWTR1 | chr3 | 149237006 | - |
5CDS-intron | ENST00000494055 | ENST00000360632 | HLTF | chr3 | 148756836 | - | WWTR1 | chr3 | 149237006 | - |
5CDS-intron | ENST00000494055 | ENST00000467467 | HLTF | chr3 | 148756836 | - | WWTR1 | chr3 | 149237006 | - |
5CDS-intron | ENST00000494055 | ENST00000474080 | HLTF | chr3 | 148756836 | - | WWTR1 | chr3 | 149237006 | - |
intron-3UTR | ENST00000481663 | ENST00000465804 | HLTF | chr3 | 148756836 | - | WWTR1 | chr3 | 149237006 | - |
intron-intron | ENST00000481663 | ENST00000360632 | HLTF | chr3 | 148756836 | - | WWTR1 | chr3 | 149237006 | - |
intron-intron | ENST00000481663 | ENST00000467467 | HLTF | chr3 | 148756836 | - | WWTR1 | chr3 | 149237006 | - |
intron-intron | ENST00000481663 | ENST00000474080 | HLTF | chr3 | 148756836 | - | WWTR1 | chr3 | 149237006 | - |
In-frame | ENST00000465259 | ENST00000465804 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - |
In-frame | ENST00000465259 | ENST00000360632 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - |
In-frame | ENST00000465259 | ENST00000467467 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - |
5CDS-intron | ENST00000465259 | ENST00000474080 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - |
In-frame | ENST00000310053 | ENST00000465804 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - |
In-frame | ENST00000310053 | ENST00000360632 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - |
In-frame | ENST00000310053 | ENST00000467467 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - |
5CDS-intron | ENST00000310053 | ENST00000474080 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - |
In-frame | ENST00000392912 | ENST00000465804 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - |
In-frame | ENST00000392912 | ENST00000360632 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - |
In-frame | ENST00000392912 | ENST00000467467 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - |
5CDS-intron | ENST00000392912 | ENST00000474080 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - |
In-frame | ENST00000494055 | ENST00000465804 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - |
In-frame | ENST00000494055 | ENST00000360632 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - |
In-frame | ENST00000494055 | ENST00000467467 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - |
5CDS-intron | ENST00000494055 | ENST00000474080 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - |
intron-3CDS | ENST00000481663 | ENST00000465804 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - |
intron-3CDS | ENST00000481663 | ENST00000360632 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - |
intron-3CDS | ENST00000481663 | ENST00000467467 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - |
intron-intron | ENST00000481663 | ENST00000474080 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000465259 | HLTF | chr3 | 148777505 | - | ENST00000465804 | WWTR1 | chr3 | 149260324 | - | 5763 | 1558 | 24 | 2192 | 722 |
ENST00000465259 | HLTF | chr3 | 148777505 | - | ENST00000360632 | WWTR1 | chr3 | 149260324 | - | 2753 | 1558 | 24 | 2192 | 722 |
ENST00000465259 | HLTF | chr3 | 148777505 | - | ENST00000467467 | WWTR1 | chr3 | 149260324 | - | 2388 | 1558 | 24 | 2192 | 722 |
ENST00000310053 | HLTF | chr3 | 148777505 | - | ENST00000465804 | WWTR1 | chr3 | 149260324 | - | 5774 | 1569 | 32 | 2203 | 723 |
ENST00000310053 | HLTF | chr3 | 148777505 | - | ENST00000360632 | WWTR1 | chr3 | 149260324 | - | 2764 | 1569 | 32 | 2203 | 723 |
ENST00000310053 | HLTF | chr3 | 148777505 | - | ENST00000467467 | WWTR1 | chr3 | 149260324 | - | 2399 | 1569 | 32 | 2203 | 723 |
ENST00000392912 | HLTF | chr3 | 148777505 | - | ENST00000465804 | WWTR1 | chr3 | 149260324 | - | 5748 | 1543 | 6 | 2177 | 723 |
ENST00000392912 | HLTF | chr3 | 148777505 | - | ENST00000360632 | WWTR1 | chr3 | 149260324 | - | 2738 | 1543 | 6 | 2177 | 723 |
ENST00000392912 | HLTF | chr3 | 148777505 | - | ENST00000467467 | WWTR1 | chr3 | 149260324 | - | 2373 | 1543 | 6 | 2177 | 723 |
ENST00000494055 | HLTF | chr3 | 148777505 | - | ENST00000465804 | WWTR1 | chr3 | 149260324 | - | 5798 | 1593 | 56 | 2227 | 723 |
ENST00000494055 | HLTF | chr3 | 148777505 | - | ENST00000360632 | WWTR1 | chr3 | 149260324 | - | 2788 | 1593 | 56 | 2227 | 723 |
ENST00000494055 | HLTF | chr3 | 148777505 | - | ENST00000467467 | WWTR1 | chr3 | 149260324 | - | 2423 | 1593 | 56 | 2227 | 723 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000465259 | ENST00000465804 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - | 0.000273048 | 0.99972695 |
ENST00000465259 | ENST00000360632 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - | 0.000930272 | 0.99906975 |
ENST00000465259 | ENST00000467467 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - | 0.001771754 | 0.99822825 |
ENST00000310053 | ENST00000465804 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - | 0.000232616 | 0.99976736 |
ENST00000310053 | ENST00000360632 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - | 0.000857833 | 0.99914217 |
ENST00000310053 | ENST00000467467 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - | 0.001722216 | 0.9982778 |
ENST00000392912 | ENST00000465804 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - | 0.000225064 | 0.999775 |
ENST00000392912 | ENST00000360632 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - | 0.000782656 | 0.9992173 |
ENST00000392912 | ENST00000467467 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - | 0.001525797 | 0.9984742 |
ENST00000494055 | ENST00000465804 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - | 0.000229857 | 0.9997701 |
ENST00000494055 | ENST00000360632 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - | 0.000826721 | 0.9991732 |
ENST00000494055 | ENST00000467467 | HLTF | chr3 | 148777505 | - | WWTR1 | chr3 | 149260324 | - | 0.00163977 | 0.9983602 |
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Fusion Genomic Features for HLTF-WWTR1 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for HLTF-WWTR1 |
Go to FGviewer for the breakpoints of chr3:148777505-chr3:149260324 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
HLTF | . |
FUNCTION: Has both helicase and E3 ubiquitin ligase activities. Possesses intrinsic ATP-dependent nucleosome-remodeling activity; This activity may be required for transcriptional activation or repression of specific target promoters (By similarity). These may include the SERPINE1 and HIV-1 promoters and the SV40 enhancer, to which this protein can bind directly. Plays a role in error-free postreplication repair (PRR) of damaged DNA and maintains genomic stability through acting as a ubiquitin ligase for 'Lys-63'-linked polyubiquitination of chromatin-bound PCNA. {ECO:0000250, ECO:0000269|PubMed:10391891, ECO:0000269|PubMed:18316726, ECO:0000269|PubMed:18719106, ECO:0000269|PubMed:7876228, ECO:0000269|PubMed:8672239, ECO:0000269|PubMed:9126292}. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000310053 | - | 13 | 25 | 38_287 | 458.3333333333333 | 1010.0 | DNA binding | . |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000392912 | - | 13 | 26 | 38_287 | 458.3333333333333 | 1161.6666666666667 | DNA binding | . |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000465259 | - | 13 | 25 | 38_287 | 457.3333333333333 | 1009.0 | DNA binding | . |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000494055 | - | 13 | 26 | 38_287 | 458.3333333333333 | 1040.6666666666667 | DNA binding | . |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000310053 | - | 13 | 25 | 294_301 | 458.3333333333333 | 1010.0 | Nucleotide binding | ATP |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000392912 | - | 13 | 26 | 294_301 | 458.3333333333333 | 1161.6666666666667 | Nucleotide binding | ATP |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000465259 | - | 13 | 25 | 294_301 | 457.3333333333333 | 1009.0 | Nucleotide binding | ATP |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000494055 | - | 13 | 26 | 294_301 | 458.3333333333333 | 1040.6666666666667 | Nucleotide binding | ATP |
Tgene | WWTR1 | chr3:148777505 | chr3:149260324 | ENST00000360632 | 2 | 7 | 225_259 | 189.33333333333334 | 401.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | WWTR1 | chr3:148777505 | chr3:149260324 | ENST00000465804 | 3 | 8 | 225_259 | 189.33333333333334 | 401.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | WWTR1 | chr3:148777505 | chr3:149260324 | ENST00000467467 | 2 | 7 | 225_259 | 189.33333333333334 | 401.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | WWTR1 | chr3:148777505 | chr3:149260324 | ENST00000360632 | 2 | 7 | 194_241 | 189.33333333333334 | 401.0 | Compositional bias | Note=Gln-rich | |
Tgene | WWTR1 | chr3:148777505 | chr3:149260324 | ENST00000465804 | 3 | 8 | 194_241 | 189.33333333333334 | 401.0 | Compositional bias | Note=Gln-rich | |
Tgene | WWTR1 | chr3:148777505 | chr3:149260324 | ENST00000467467 | 2 | 7 | 194_241 | 189.33333333333334 | 401.0 | Compositional bias | Note=Gln-rich |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000310053 | - | 13 | 25 | 435_606 | 458.3333333333333 | 1010.0 | Domain | Helicase ATP-binding |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000310053 | - | 13 | 25 | 837_996 | 458.3333333333333 | 1010.0 | Domain | Helicase C-terminal |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000392912 | - | 13 | 26 | 435_606 | 458.3333333333333 | 1161.6666666666667 | Domain | Helicase ATP-binding |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000392912 | - | 13 | 26 | 837_996 | 458.3333333333333 | 1161.6666666666667 | Domain | Helicase C-terminal |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000465259 | - | 13 | 25 | 435_606 | 457.3333333333333 | 1009.0 | Domain | Helicase ATP-binding |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000465259 | - | 13 | 25 | 837_996 | 457.3333333333333 | 1009.0 | Domain | Helicase C-terminal |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000494055 | - | 13 | 26 | 435_606 | 458.3333333333333 | 1040.6666666666667 | Domain | Helicase ATP-binding |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000494055 | - | 13 | 26 | 837_996 | 458.3333333333333 | 1040.6666666666667 | Domain | Helicase C-terminal |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000310053 | - | 13 | 25 | 557_560 | 458.3333333333333 | 1010.0 | Motif | Note=DEGH box |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000392912 | - | 13 | 26 | 557_560 | 458.3333333333333 | 1161.6666666666667 | Motif | Note=DEGH box |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000465259 | - | 13 | 25 | 557_560 | 457.3333333333333 | 1009.0 | Motif | Note=DEGH box |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000494055 | - | 13 | 26 | 557_560 | 458.3333333333333 | 1040.6666666666667 | Motif | Note=DEGH box |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000310053 | - | 13 | 25 | 760_801 | 458.3333333333333 | 1010.0 | Zinc finger | RING-type |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000392912 | - | 13 | 26 | 760_801 | 458.3333333333333 | 1161.6666666666667 | Zinc finger | RING-type |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000465259 | - | 13 | 25 | 760_801 | 457.3333333333333 | 1009.0 | Zinc finger | RING-type |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000494055 | - | 13 | 26 | 760_801 | 458.3333333333333 | 1040.6666666666667 | Zinc finger | RING-type |
Tgene | WWTR1 | chr3:148777505 | chr3:149260324 | ENST00000360632 | 2 | 7 | 124_157 | 189.33333333333334 | 401.0 | Domain | WW | |
Tgene | WWTR1 | chr3:148777505 | chr3:149260324 | ENST00000465804 | 3 | 8 | 124_157 | 189.33333333333334 | 401.0 | Domain | WW | |
Tgene | WWTR1 | chr3:148777505 | chr3:149260324 | ENST00000467467 | 2 | 7 | 124_157 | 189.33333333333334 | 401.0 | Domain | WW |
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Fusion Gene Sequence for HLTF-WWTR1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000465259_ENST00000465804_TCGA-PD-A5DF-01A_HLTF_chr3_148777505_-_WWTR1_chr3_149260324_length(transcript)=5763nt_BP=1558nt GAAGGAGACGGCGTCGACGTCTGACTGGACTCGCGGCGACTTACCTTTCAGTCGTGCGCTCCTGATCCGGCGCTCGGAATTTGTCCCCGG CTTCAGGGCTGCGGGGCCTGGAAGGAGGCGTATCGAGGCGGCTCGAAAACGATCCAGGGGAGCCGAGGCGCTCCTCTTGTCATCCCACTC AGCGCCATGTCCTGGATGTTCAAGAGGGATCCAGTTTGGAAGTACTTGCAGACTGTCCAGTATGGAGTTCATGGAAATTTTCCACGCCTC TCATATCCAACTTTCTTTCCACGTTTTGAATTCCAAGATGTTATCCCTCCAGATGACTTTCTAACTAGTGATGAAGAAGTAGATTCCGTT TTATTTGGAAGTTTGAGAGGTCATGTGGTTGGACTACGCTATTACACGGGAGTAGTTAATAATAATGAAATGGTTGCATTACAACGAGAT CCTAATAACCCTTATGATAAGAATGCAATTAAAGTAAACAATGTGAATGGAAATCAAGTTGGCCATTTAAAGAAAGAGCTTGCAGGTGCT TTGGCCTATATCATGGACAACAAATTGGCACAAATTGAAGGGGTAGTTCCTTTTGGTGCAAACAATGCTTTTACCATGCCTCTGCATATG ACTTTTTGGGGAAAAGAAGAAAATAGAAAAGCGGTTTCAGATCAGTTGAAGAAACATGGATTTAAATTGGGTCCTGCACCAAAAACTTTA GGATTCAATTTGGAAAGTGGTTGGGGCTCTGGAAGAGCTGGACCAAGCTATAGTATGCCAGTGCATGCTGCAGTACAGATGACAACTGAA CAGCTTAAAACAGAATTTGACAAATTGTTTGAAGATTTAAAAGAAGATGATAAAACCCATGAAATGGAACCAGCTGAGGCTATTGAAACA CCACTGCTTCCACATCAAAAACAAGCTCTAGCTTGGATGGTGTCACGGGAAAATAGCAAAGAACTTCCACCATTCTGGGAACAGCGAAAT GACTTATACTATAACACAATAACAAATTTTTCTGAGAAGGACCGACCAGAAAATGTCCATGGAGGAATTTTAGCTGATGATATGGGTTTG GGTAAAACTCTTACGGCCATTGCAGTAATCCTTACCAACTTCCATGATGGCAGACCTCTTCCTATTGAAAGAGTTAAAAAGAATCTACTG AAGAAGGAATATAATGTTAACGATGACTCTATGAAACTTGGAGGAAACAATACCAGTGAAAAGGCAGATGGACTAAGCAAAGACGCATCT AGATGTAGTGAACAACCCAGTATTTCAGATATCAAGGAGAAGAGTAAGTTTCGCATGTCAGAATTGTCTAGCTCCCGCCCCAAAAGAAGA AAAACTGCTGTCCAGTACATAGAAAGCAGTGATTCAGAGGAAATTGAAACAAGTGAATTGCCGCAGAAAATGAAAGGCAAACTGAAAAAT GTACAGTCTGAAACTAAAGGCAGGGCGAAAGGATCTTCTAAGGTTATAGAAGATGTGGCATTTGCATGTGCATTAACTTCATCTGTTCCT ACAACAAAAAAGAAAATGTTGAAAAAGGTGATGAATCACCAACACCAGCAGCAGATGGCCCCCAGTACCCTGAGCCAGCAGAACCACCCC ACTCAGAACCCACCCGCAGGGCTCATGAGTATGCCCAATGCGCTGACCACTCAGCAGCAGCAGCAGCAGAAACTGCGGCTTCAGAGAATC CAGATGGAGAGAGAAAGGATTCGAATGCGCCAAGAGGAGCTCATGAGGCAGGAAGCTGCCCTCTGTCGACAGCTCCCCATGGAAGCTGAG ACTCTTGCCCCAGTTCAGGCTGCTGTCAACCCACCCACGATGACCCCAGACATGAGATCCATCACTAATAATAGCTCAGATCCTTTCCTC AATGGAGGGCCATATCATTCGAGGGAGCAGAGCACTGACAGTGGCCTGGGGTTAGGGTGCTACAGTGTCCCCACAACTCCGGAGGACTTC CTCAGCAATGTGGATGAGATGGATACAGGAGAAAACGCAGGACAAACACCCATGAACATCAATCCCCAACAGACCCGTTTCCCTGATTTC CTTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGCTCTG AACAAAAGTGAGCCCTTTCTAACCTGGCTGTAATCACTACCATTGTAACTTGGATGTAGCCATGACCTTACATTTCCTGGGCCTCTTGGA AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCCAGTTTAATCA TTGCCTGGTTTTGATTGAGAGTAACTTAAGTTAAACATAAATAAATATTCTATTTTCATTTTCTGCAAGCCTGCGTTCTTGTGACAGATT ATACAGAATTGTGTCTGCAGGATTGATTATGCAGAATACTTTTCTCTTTCTTCTCTGCTGCCCCATGGCTAAGCTTTATGGGTGTTAATT GAAATTTATACACCAATTGATTTTAAACCATAAAAAGCTGACCACAGGCAGTTACTTCTGAGGGCATCTTGGTCCAGGAAATGTGCACAA AATTCGACCTGATTTACAGTTTCAAAAACTGTATTGATGACAGTAGTACCAAATGCTTTAAAAACTATTTAACTTGAGCTTTAAAAATCA TTGTATGGATAGTAAAATTCTACTGTATGGAATACAATGTAATTTTGAATCCATGCTGGCTCTGATGGCTCTTATTAGTCTGTATTTATA AAGGCACACAGTCCTATTGTAGCTTATCTTTCGTTATTTTACTGCAGAGCATCTAGACAACTTAGTCCCTCCAGCGGGAAAGTAGCAGCA GCAGCATTAGTCACAGGTCTTACACTACAGATCTTGTGAAAGAGACCAGTTTGGTACTAATTATGAGCATTTTATTCAAACAAAAGTTTT TGAAATATTACAACTGGGGATTTAAAAAATTGCAGCTTAGAATCTGATGGTTTTTTTTTTTCTTGATGTTGTTTGTTTGTTTTTGAGATC GAGTTTTGCTCTTGTTGTCCAGGCTGGAATGCAATGGCACAATCTCGGCTCACTGCAACCTCTGCCTTCTGGGTTCAAGCGATTCTCCTG CCTTAGCCTCCCGAGTAGCTGGGATTACAGGCACCTGCCACCACGTCCGGCTAATTTTTTGTATTTTGAGTAGAGACGGGGTTTCACCAT AATGGTCAGGCTGTTCTCAAACTCCTGATCTCAGGTGATCCACCCATCTCGGCCTCCCAAAGTGCTGGGATTACTGGCGTGAGCCACCGC ACCCGGCCTTGATGTTTATTTTATAAAGCACTGTAATTTTGTAGCTGATGACAAAAGGCAGCCAAATGTTTTTGATAAATCAGTGGCAAC TGTATTTTTGTCTTTTGAAATAACTCTGAAAACATCAGGACAACATAGATTTCAACCTGATAGCACACCACACACAGTGAGCTGTTGCTT TTTAAATTCTGAAGCCTTGTCAGGTTTGCTTCCTAGATTTCAAGTGTTTAAAATAATTCTATCTATGAAACTGAAGGATGAAGCAGATCT CTGACTGACATGTAAAAAAAAATGCCCTTTGAGGGTGTATGGTGGAGATAAATGTTTCTGAATTCAGTAAAATTGATTCCTAAGTATATT ATCCTAATCCTGTTTGCTACAGTTGGTATAAAAAGGCATGAAATATGTATTCAATACCTCTTATGTAACCAAAACCATTTTTAATTAGCT TTTAAGGACTGAGAGAGCATCATGTTCAACTGGCATGCAGTCTGCCTGCATTGCCAATGAAGTCCTCAACTGTTTAATATTTTGAACTAA TATTATTTATAATCTATGAATTTAATCTTTTTTGAAAGACTTTAATAATTTGAGTCTCTGAGAGGATACTTTCAATTTCCATGGGGGACT TATTTGTTGGGGATCTTAAATAAGATTCCTTTTGATCTACCGGAATATACATGTACAGAGTACATTGGATCATGTTGGAAAGAAGGCAAG TGAAAAGGTCAGAGATGAAGTAGCAAAGTTATGGAATATCGTGGAAAGGATACTAGTTGTGAAATGGAAAGAGACAAGTTATAGTACCCC AAAAGCAAAACAAGCAGGAGATGCAAGAGATGCCCCAAAAGGACAAAGCAACAATTTTCTGTTGCCACCTTTATACCGGAAGACTCTGTT GTAGAAGAAAAGAAGGCTTTGGTGCACCTTATGTGGGAGGAGGAGGGGCAGGGCATGCTGATGCTGAGCGTACAGGCAGACAAGAGCGTA GCCTGCTGTTGCCTCCATCACTATGAAATGACTTATTTTACCTGAAGGACCCATGGTTTATGTTCCTCTAATTCCTTTCACTCTCCCTAA GCCCTCTGAGAGAGATGAAGATAGATGATTTTATTGCTACTAAATTGAAGGGAGCACTATTTCTTTTTGTCTTTTGTTAGCAAAAAATTG CAAAAAGAATTGTACATTCTTGCTAAAAATAAATAAATAAATAAAAAATTAAAAAAACAAGGGACCTAACAAAACTCAGCAGTGTTACTG TATTTTTAAAAAATATTTTTATAGACTCATTTTCAGGTTATTAAATGTAAGAGAAACAGATACCCCTCTTTTTTAAAGTAGGTAAATCAT TGATGATTTATATTACCAATTTTTAGAAGTAATTTTCTAGTAAGCTTGTGGCATCAGAAAATACTAGAAGATTTTTTTAGTTAAATTAGT TAGAACATTTATGAATGAATATAATAAATATTTTTTCAGAATAAAATATGGACCCTTTGTGTTTACTAATAGATAAAGCCAGATATAATT TTTTGTTTTTAAGGCCACAAAATATGGCCTTTGTTAAAGAACACTAAAGTTAGAAATCTAAAGTTAGAGCAACTTTTTAATGGCTATTTC CTATTATTGTAAGTGTTAAAACCCCTGCAGAATTCTTGATAAGGTGCTATTTATACTATATTTCTTATTATAAGATAACTGTCTTTAGTC TTCTTAGTACTAGTCTTTTTAGTACTAAATCAATCAGTAAACATCATCATTTCACCCCAAAATTTTGTCACAGAAAAGGCGTATCAAATG AAAAATAATTTCAGAGATCTTTCTTTCAAGATATTTTTTCCTGATAAAATACATTGTCTTGAAGTAAATACATTGTCAAAACCTAATTGC AATTCTGTTAAATCTAAGTAATTTTTAGACAGTGTTTCACCGTATTATTTAGGATGTGAAATGCCATTTCTTTCACTGATTACACCATAT ACAGGAAACAGGTAAAACAGTGAAAACTTTATTGTGCTGGTTGATGCCAACTTGGTTGAAAAGCTCTCTGCAGAAGAAGTGATCTAGACT GACAGAAGTGTTGCTAATTACAAGTTGTGTTCTCATGACGTAATTAGAAAGTAACTTCTCAAAGTACAACTTTTATGAAAAAAATAAGCT GTTAAAAAAAGGAAATCGTAGGTTAATTTAATTGGGAAAATGGGCAATTGACAGAGACCATTTTCCTAACACATATATGTGCTAGTACTT TAACTTTTTAAAATTTTACTTCTACGTTTTGTAATATAAAAATTTCTATTTTAAGTTTAGAATGTTATACGTACCGAAAGTATGCAGCCA AATCGATCAGATCAAACCATTTTACCTGGAGTTTGGTACTGGTTTTTACTTCTCTGAATCTGTATAAGAAAAATAAAGACAATTGAACTT >In-frame_ENST00000465259_ENST00000465804_TCGA-PD-A5DF-01A_HLTF_chr3_148777505_-_WWTR1_chr3_149260324_length(amino acids)=722AA_start in transcript=24_stop in transcript=2192 MDSRRLTFQSCAPDPALGICPRLQGCGAWKEAYRGGSKTIQGSRGAPLVIPLSAMSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPR FEFQDVIPPDDFLTSDEEVDSVLFGSLRGHVVGLRYYTGVVNNNEMVALQRDPNNPYDKNAIKVNNVNGNQVGHLKKELAGALAYIMDNK LAQIEGVVPFGANNAFTMPLHMTFWGKEENRKAVSDQLKKHGFKLGPAPKTLGFNLESGWGSGRAGPSYSMPVHAAVQMTTEQLKTEFDK LFEDLKEDDKTHEMEPAEAIETPLLPHQKQALAWMVSRENSKELPPFWEQRNDLYYNTITNFSEKDRPENVHGGILADDMGLGKTLTAIA VILTNFHDGRPLPIERVKKNLLKKEYNVNDDSMKLGGNNTSEKADGLSKDASRCSEQPSISDIKEKSKFRMSELSSSRPKRRKTAVQYIE SSDSEEIETSELPQKMKGKLKNVQSETKGRAKGSSKVIEDVAFACALTSSVPTTKKKMLKKVMNHQHQQQMAPSTLSQQNHPTQNPPAGL MSMPNALTTQQQQQQKLRLQRIQMERERIRMRQEELMRQEAALCRQLPMEAETLAPVQAAVNPPTMTPDMRSITNNSSDPFLNGGPYHSR EQSTDSGLGLGCYSVPTTPEDFLSNVDEMDTGENAGQTPMNINPQQTRFPDFLDCLPGTNVDLGTLESEDLIPLFNDVESALNKSEPFLT -------------------------------------------------------------- >In-frame_ENST00000465259_ENST00000360632_TCGA-PD-A5DF-01A_HLTF_chr3_148777505_-_WWTR1_chr3_149260324_length(transcript)=2753nt_BP=1558nt GAAGGAGACGGCGTCGACGTCTGACTGGACTCGCGGCGACTTACCTTTCAGTCGTGCGCTCCTGATCCGGCGCTCGGAATTTGTCCCCGG CTTCAGGGCTGCGGGGCCTGGAAGGAGGCGTATCGAGGCGGCTCGAAAACGATCCAGGGGAGCCGAGGCGCTCCTCTTGTCATCCCACTC AGCGCCATGTCCTGGATGTTCAAGAGGGATCCAGTTTGGAAGTACTTGCAGACTGTCCAGTATGGAGTTCATGGAAATTTTCCACGCCTC TCATATCCAACTTTCTTTCCACGTTTTGAATTCCAAGATGTTATCCCTCCAGATGACTTTCTAACTAGTGATGAAGAAGTAGATTCCGTT TTATTTGGAAGTTTGAGAGGTCATGTGGTTGGACTACGCTATTACACGGGAGTAGTTAATAATAATGAAATGGTTGCATTACAACGAGAT CCTAATAACCCTTATGATAAGAATGCAATTAAAGTAAACAATGTGAATGGAAATCAAGTTGGCCATTTAAAGAAAGAGCTTGCAGGTGCT TTGGCCTATATCATGGACAACAAATTGGCACAAATTGAAGGGGTAGTTCCTTTTGGTGCAAACAATGCTTTTACCATGCCTCTGCATATG ACTTTTTGGGGAAAAGAAGAAAATAGAAAAGCGGTTTCAGATCAGTTGAAGAAACATGGATTTAAATTGGGTCCTGCACCAAAAACTTTA GGATTCAATTTGGAAAGTGGTTGGGGCTCTGGAAGAGCTGGACCAAGCTATAGTATGCCAGTGCATGCTGCAGTACAGATGACAACTGAA CAGCTTAAAACAGAATTTGACAAATTGTTTGAAGATTTAAAAGAAGATGATAAAACCCATGAAATGGAACCAGCTGAGGCTATTGAAACA CCACTGCTTCCACATCAAAAACAAGCTCTAGCTTGGATGGTGTCACGGGAAAATAGCAAAGAACTTCCACCATTCTGGGAACAGCGAAAT GACTTATACTATAACACAATAACAAATTTTTCTGAGAAGGACCGACCAGAAAATGTCCATGGAGGAATTTTAGCTGATGATATGGGTTTG GGTAAAACTCTTACGGCCATTGCAGTAATCCTTACCAACTTCCATGATGGCAGACCTCTTCCTATTGAAAGAGTTAAAAAGAATCTACTG AAGAAGGAATATAATGTTAACGATGACTCTATGAAACTTGGAGGAAACAATACCAGTGAAAAGGCAGATGGACTAAGCAAAGACGCATCT AGATGTAGTGAACAACCCAGTATTTCAGATATCAAGGAGAAGAGTAAGTTTCGCATGTCAGAATTGTCTAGCTCCCGCCCCAAAAGAAGA AAAACTGCTGTCCAGTACATAGAAAGCAGTGATTCAGAGGAAATTGAAACAAGTGAATTGCCGCAGAAAATGAAAGGCAAACTGAAAAAT GTACAGTCTGAAACTAAAGGCAGGGCGAAAGGATCTTCTAAGGTTATAGAAGATGTGGCATTTGCATGTGCATTAACTTCATCTGTTCCT ACAACAAAAAAGAAAATGTTGAAAAAGGTGATGAATCACCAACACCAGCAGCAGATGGCCCCCAGTACCCTGAGCCAGCAGAACCACCCC ACTCAGAACCCACCCGCAGGGCTCATGAGTATGCCCAATGCGCTGACCACTCAGCAGCAGCAGCAGCAGAAACTGCGGCTTCAGAGAATC CAGATGGAGAGAGAAAGGATTCGAATGCGCCAAGAGGAGCTCATGAGGCAGGAAGCTGCCCTCTGTCGACAGCTCCCCATGGAAGCTGAG ACTCTTGCCCCAGTTCAGGCTGCTGTCAACCCACCCACGATGACCCCAGACATGAGATCCATCACTAATAATAGCTCAGATCCTTTCCTC AATGGAGGGCCATATCATTCGAGGGAGCAGAGCACTGACAGTGGCCTGGGGTTAGGGTGCTACAGTGTCCCCACAACTCCGGAGGACTTC CTCAGCAATGTGGATGAGATGGATACAGGAGAAAACGCAGGACAAACACCCATGAACATCAATCCCCAACAGACCCGTTTCCCTGATTTC CTTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGCTCTG AACAAAAGTGAGCCCTTTCTAACCTGGCTGTAATCACTACCATTGTAACTTGGATGTAGCCATGACCTTACATTTCCTGGGCCTCTTGGA AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCCAGTTTAATCA TTGCCTGGTTTTGATTGAGAGTAACTTAAGTTAAACATAAATAAATATTCTATTTTCATTTTCTGCAAGCCTGCGTTCTTGTGACAGATT ATACAGAATTGTGTCTGCAGGATTGATTATGCAGAATACTTTTCTCTTTCTTCTCTGCTGCCCCATGGCTAAGCTTTATGGGTGTTAATT GAAATTTATACACCAATTGATTTTAAACCATAAAAAGCTGACCACAGGCAGTTACTTCTGAGGGCATCTTGGTCCAGGAAATGTGCACAA AATTCGACCTGATTTACAGTTTCAAAAACTGTATTGATGACAGTAGTACCAAATGCTTTAAAAACTATTTAACTTGAGCTTTAAAAATCA >In-frame_ENST00000465259_ENST00000360632_TCGA-PD-A5DF-01A_HLTF_chr3_148777505_-_WWTR1_chr3_149260324_length(amino acids)=722AA_start in transcript=24_stop in transcript=2192 MDSRRLTFQSCAPDPALGICPRLQGCGAWKEAYRGGSKTIQGSRGAPLVIPLSAMSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPR FEFQDVIPPDDFLTSDEEVDSVLFGSLRGHVVGLRYYTGVVNNNEMVALQRDPNNPYDKNAIKVNNVNGNQVGHLKKELAGALAYIMDNK LAQIEGVVPFGANNAFTMPLHMTFWGKEENRKAVSDQLKKHGFKLGPAPKTLGFNLESGWGSGRAGPSYSMPVHAAVQMTTEQLKTEFDK LFEDLKEDDKTHEMEPAEAIETPLLPHQKQALAWMVSRENSKELPPFWEQRNDLYYNTITNFSEKDRPENVHGGILADDMGLGKTLTAIA VILTNFHDGRPLPIERVKKNLLKKEYNVNDDSMKLGGNNTSEKADGLSKDASRCSEQPSISDIKEKSKFRMSELSSSRPKRRKTAVQYIE SSDSEEIETSELPQKMKGKLKNVQSETKGRAKGSSKVIEDVAFACALTSSVPTTKKKMLKKVMNHQHQQQMAPSTLSQQNHPTQNPPAGL MSMPNALTTQQQQQQKLRLQRIQMERERIRMRQEELMRQEAALCRQLPMEAETLAPVQAAVNPPTMTPDMRSITNNSSDPFLNGGPYHSR EQSTDSGLGLGCYSVPTTPEDFLSNVDEMDTGENAGQTPMNINPQQTRFPDFLDCLPGTNVDLGTLESEDLIPLFNDVESALNKSEPFLT -------------------------------------------------------------- >In-frame_ENST00000465259_ENST00000467467_TCGA-PD-A5DF-01A_HLTF_chr3_148777505_-_WWTR1_chr3_149260324_length(transcript)=2388nt_BP=1558nt GAAGGAGACGGCGTCGACGTCTGACTGGACTCGCGGCGACTTACCTTTCAGTCGTGCGCTCCTGATCCGGCGCTCGGAATTTGTCCCCGG CTTCAGGGCTGCGGGGCCTGGAAGGAGGCGTATCGAGGCGGCTCGAAAACGATCCAGGGGAGCCGAGGCGCTCCTCTTGTCATCCCACTC AGCGCCATGTCCTGGATGTTCAAGAGGGATCCAGTTTGGAAGTACTTGCAGACTGTCCAGTATGGAGTTCATGGAAATTTTCCACGCCTC TCATATCCAACTTTCTTTCCACGTTTTGAATTCCAAGATGTTATCCCTCCAGATGACTTTCTAACTAGTGATGAAGAAGTAGATTCCGTT TTATTTGGAAGTTTGAGAGGTCATGTGGTTGGACTACGCTATTACACGGGAGTAGTTAATAATAATGAAATGGTTGCATTACAACGAGAT CCTAATAACCCTTATGATAAGAATGCAATTAAAGTAAACAATGTGAATGGAAATCAAGTTGGCCATTTAAAGAAAGAGCTTGCAGGTGCT TTGGCCTATATCATGGACAACAAATTGGCACAAATTGAAGGGGTAGTTCCTTTTGGTGCAAACAATGCTTTTACCATGCCTCTGCATATG ACTTTTTGGGGAAAAGAAGAAAATAGAAAAGCGGTTTCAGATCAGTTGAAGAAACATGGATTTAAATTGGGTCCTGCACCAAAAACTTTA GGATTCAATTTGGAAAGTGGTTGGGGCTCTGGAAGAGCTGGACCAAGCTATAGTATGCCAGTGCATGCTGCAGTACAGATGACAACTGAA CAGCTTAAAACAGAATTTGACAAATTGTTTGAAGATTTAAAAGAAGATGATAAAACCCATGAAATGGAACCAGCTGAGGCTATTGAAACA CCACTGCTTCCACATCAAAAACAAGCTCTAGCTTGGATGGTGTCACGGGAAAATAGCAAAGAACTTCCACCATTCTGGGAACAGCGAAAT GACTTATACTATAACACAATAACAAATTTTTCTGAGAAGGACCGACCAGAAAATGTCCATGGAGGAATTTTAGCTGATGATATGGGTTTG GGTAAAACTCTTACGGCCATTGCAGTAATCCTTACCAACTTCCATGATGGCAGACCTCTTCCTATTGAAAGAGTTAAAAAGAATCTACTG AAGAAGGAATATAATGTTAACGATGACTCTATGAAACTTGGAGGAAACAATACCAGTGAAAAGGCAGATGGACTAAGCAAAGACGCATCT AGATGTAGTGAACAACCCAGTATTTCAGATATCAAGGAGAAGAGTAAGTTTCGCATGTCAGAATTGTCTAGCTCCCGCCCCAAAAGAAGA AAAACTGCTGTCCAGTACATAGAAAGCAGTGATTCAGAGGAAATTGAAACAAGTGAATTGCCGCAGAAAATGAAAGGCAAACTGAAAAAT GTACAGTCTGAAACTAAAGGCAGGGCGAAAGGATCTTCTAAGGTTATAGAAGATGTGGCATTTGCATGTGCATTAACTTCATCTGTTCCT ACAACAAAAAAGAAAATGTTGAAAAAGGTGATGAATCACCAACACCAGCAGCAGATGGCCCCCAGTACCCTGAGCCAGCAGAACCACCCC ACTCAGAACCCACCCGCAGGGCTCATGAGTATGCCCAATGCGCTGACCACTCAGCAGCAGCAGCAGCAGAAACTGCGGCTTCAGAGAATC CAGATGGAGAGAGAAAGGATTCGAATGCGCCAAGAGGAGCTCATGAGGCAGGAAGCTGCCCTCTGTCGACAGCTCCCCATGGAAGCTGAG ACTCTTGCCCCAGTTCAGGCTGCTGTCAACCCACCCACGATGACCCCAGACATGAGATCCATCACTAATAATAGCTCAGATCCTTTCCTC AATGGAGGGCCATATCATTCGAGGGAGCAGAGCACTGACAGTGGCCTGGGGTTAGGGTGCTACAGTGTCCCCACAACTCCGGAGGACTTC CTCAGCAATGTGGATGAGATGGATACAGGAGAAAACGCAGGACAAACACCCATGAACATCAATCCCCAACAGACCCGTTTCCCTGATTTC CTTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGCTCTG AACAAAAGTGAGCCCTTTCTAACCTGGCTGTAATCACTACCATTGTAACTTGGATGTAGCCATGACCTTACATTTCCTGGGCCTCTTGGA AAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCCAGTTTAATCA >In-frame_ENST00000465259_ENST00000467467_TCGA-PD-A5DF-01A_HLTF_chr3_148777505_-_WWTR1_chr3_149260324_length(amino acids)=722AA_start in transcript=24_stop in transcript=2192 MDSRRLTFQSCAPDPALGICPRLQGCGAWKEAYRGGSKTIQGSRGAPLVIPLSAMSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPR FEFQDVIPPDDFLTSDEEVDSVLFGSLRGHVVGLRYYTGVVNNNEMVALQRDPNNPYDKNAIKVNNVNGNQVGHLKKELAGALAYIMDNK LAQIEGVVPFGANNAFTMPLHMTFWGKEENRKAVSDQLKKHGFKLGPAPKTLGFNLESGWGSGRAGPSYSMPVHAAVQMTTEQLKTEFDK LFEDLKEDDKTHEMEPAEAIETPLLPHQKQALAWMVSRENSKELPPFWEQRNDLYYNTITNFSEKDRPENVHGGILADDMGLGKTLTAIA VILTNFHDGRPLPIERVKKNLLKKEYNVNDDSMKLGGNNTSEKADGLSKDASRCSEQPSISDIKEKSKFRMSELSSSRPKRRKTAVQYIE SSDSEEIETSELPQKMKGKLKNVQSETKGRAKGSSKVIEDVAFACALTSSVPTTKKKMLKKVMNHQHQQQMAPSTLSQQNHPTQNPPAGL MSMPNALTTQQQQQQKLRLQRIQMERERIRMRQEELMRQEAALCRQLPMEAETLAPVQAAVNPPTMTPDMRSITNNSSDPFLNGGPYHSR EQSTDSGLGLGCYSVPTTPEDFLSNVDEMDTGENAGQTPMNINPQQTRFPDFLDCLPGTNVDLGTLESEDLIPLFNDVESALNKSEPFLT -------------------------------------------------------------- >In-frame_ENST00000310053_ENST00000465804_TCGA-PD-A5DF-01A_HLTF_chr3_148777505_-_WWTR1_chr3_149260324_length(transcript)=5774nt_BP=1569nt TTGTTGCAGAAGGAGACGGCGTCGACGTCTGACTGGACTCGCGGCGACTTACCTTTCAGTCGTGCGCTCCTGATCCGGCGCTCGGAATTT GTCCCCGGCTTCAGGGCTGCGGGGCCTGGAAGGAGGCGTATCGAGGCGGCTCGAAAACGATCCAGGGGAGCCGAGGCGCTCCTCTTGTCA TCCCACTCAGCGCCATGTCCTGGATGTTCAAGAGGGATCCAGTTTGGAAGTACTTGCAGACTGTCCAGTATGGAGTTCATGGAAATTTTC CACGCCTCTCATATCCAACTTTCTTTCCACGTTTTGAATTCCAAGATGTTATCCCTCCAGATGACTTTCTAACTAGTGATGAAGAAGTAG ATTCCGTTTTATTTGGAAGTTTGAGAGGTCATGTGGTTGGACTACGCTATTACACGGGAGTAGTTAATAATAATGAAATGGTTGCATTAC AACGAGATCCTAATAACCCTTATGATAAGAATGCAATTAAAGTAAACAATGTGAATGGAAATCAAGTTGGCCATTTAAAGAAAGAGCTTG CAGGTGCTTTGGCCTATATCATGGACAACAAATTGGCACAAATTGAAGGGGTAGTTCCTTTTGGTGCAAACAATGCTTTTACCATGCCTC TGCATATGACTTTTTGGGGAAAAGAAGAAAATAGAAAAGCGGTTTCAGATCAGTTGAAGAAACATGGATTTAAATTGGGTCCTGCACCAA AAACTTTAGGATTCAATTTGGAAAGTGGTTGGGGCTCTGGAAGAGCTGGACCAAGCTATAGTATGCCAGTGCATGCTGCAGTACAGATGA CAACTGAACAGCTTAAAACAGAATTTGACAAATTGTTTGAAGATTTAAAAGAAGATGATAAAACCCATGAAATGGAACCAGCTGAGGCTA TTGAAACACCACTGCTTCCACATCAAAAACAAGCTCTAGCTTGGATGGTGTCACGGGAAAATAGCAAAGAACTTCCACCATTCTGGGAAC AGCGAAATGACTTATACTATAACACAATAACAAATTTTTCTGAGAAGGACCGACCAGAAAATGTCCATGGAGGAATTTTAGCTGATGATA TGGGTTTGGGTAAAACTCTTACGGCCATTGCAGTAATCCTTACCAACTTCCATGATGGCAGACCTCTTCCTATTGAAAGAGTTAAAAAGA ATCTACTGAAGAAGGAATATAATGTTAACGATGACTCTATGAAACTTGGAGGAAACAATACCAGTGAAAAGGCAGATGGACTAAGCAAAG ACGCATCTAGATGTAGTGAACAACCCAGTATTTCAGATATCAAGGAGAAGAGTAAGTTTCGCATGTCAGAATTGTCTAGCTCCCGCCCCA AAAGAAGAAAAACTGCTGTCCAGTACATAGAAAGCAGTGATTCAGAGGAAATTGAAACAAGTGAATTGCCGCAGAAAATGAAAGGCAAAC TGAAAAATGTACAGTCTGAAACTAAAGGCAGGGCGAAAGCAGGATCTTCTAAGGTTATAGAAGATGTGGCATTTGCATGTGCATTAACTT CATCTGTTCCTACAACAAAAAAGAAAATGTTGAAAAAGGTGATGAATCACCAACACCAGCAGCAGATGGCCCCCAGTACCCTGAGCCAGC AGAACCACCCCACTCAGAACCCACCCGCAGGGCTCATGAGTATGCCCAATGCGCTGACCACTCAGCAGCAGCAGCAGCAGAAACTGCGGC TTCAGAGAATCCAGATGGAGAGAGAAAGGATTCGAATGCGCCAAGAGGAGCTCATGAGGCAGGAAGCTGCCCTCTGTCGACAGCTCCCCA TGGAAGCTGAGACTCTTGCCCCAGTTCAGGCTGCTGTCAACCCACCCACGATGACCCCAGACATGAGATCCATCACTAATAATAGCTCAG ATCCTTTCCTCAATGGAGGGCCATATCATTCGAGGGAGCAGAGCACTGACAGTGGCCTGGGGTTAGGGTGCTACAGTGTCCCCACAACTC CGGAGGACTTCCTCAGCAATGTGGATGAGATGGATACAGGAGAAAACGCAGGACAAACACCCATGAACATCAATCCCCAACAGACCCGTT TCCCTGATTTCCTTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAGACCTGATCCCCCTCTTCAATGATGTAG AGTCTGCTCTGAACAAAAGTGAGCCCTTTCTAACCTGGCTGTAATCACTACCATTGTAACTTGGATGTAGCCATGACCTTACATTTCCTG GGCCTCTTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGC CAGTTTAATCATTGCCTGGTTTTGATTGAGAGTAACTTAAGTTAAACATAAATAAATATTCTATTTTCATTTTCTGCAAGCCTGCGTTCT TGTGACAGATTATACAGAATTGTGTCTGCAGGATTGATTATGCAGAATACTTTTCTCTTTCTTCTCTGCTGCCCCATGGCTAAGCTTTAT GGGTGTTAATTGAAATTTATACACCAATTGATTTTAAACCATAAAAAGCTGACCACAGGCAGTTACTTCTGAGGGCATCTTGGTCCAGGA AATGTGCACAAAATTCGACCTGATTTACAGTTTCAAAAACTGTATTGATGACAGTAGTACCAAATGCTTTAAAAACTATTTAACTTGAGC TTTAAAAATCATTGTATGGATAGTAAAATTCTACTGTATGGAATACAATGTAATTTTGAATCCATGCTGGCTCTGATGGCTCTTATTAGT CTGTATTTATAAAGGCACACAGTCCTATTGTAGCTTATCTTTCGTTATTTTACTGCAGAGCATCTAGACAACTTAGTCCCTCCAGCGGGA AAGTAGCAGCAGCAGCATTAGTCACAGGTCTTACACTACAGATCTTGTGAAAGAGACCAGTTTGGTACTAATTATGAGCATTTTATTCAA ACAAAAGTTTTTGAAATATTACAACTGGGGATTTAAAAAATTGCAGCTTAGAATCTGATGGTTTTTTTTTTTCTTGATGTTGTTTGTTTG TTTTTGAGATCGAGTTTTGCTCTTGTTGTCCAGGCTGGAATGCAATGGCACAATCTCGGCTCACTGCAACCTCTGCCTTCTGGGTTCAAG CGATTCTCCTGCCTTAGCCTCCCGAGTAGCTGGGATTACAGGCACCTGCCACCACGTCCGGCTAATTTTTTGTATTTTGAGTAGAGACGG GGTTTCACCATAATGGTCAGGCTGTTCTCAAACTCCTGATCTCAGGTGATCCACCCATCTCGGCCTCCCAAAGTGCTGGGATTACTGGCG TGAGCCACCGCACCCGGCCTTGATGTTTATTTTATAAAGCACTGTAATTTTGTAGCTGATGACAAAAGGCAGCCAAATGTTTTTGATAAA TCAGTGGCAACTGTATTTTTGTCTTTTGAAATAACTCTGAAAACATCAGGACAACATAGATTTCAACCTGATAGCACACCACACACAGTG AGCTGTTGCTTTTTAAATTCTGAAGCCTTGTCAGGTTTGCTTCCTAGATTTCAAGTGTTTAAAATAATTCTATCTATGAAACTGAAGGAT GAAGCAGATCTCTGACTGACATGTAAAAAAAAATGCCCTTTGAGGGTGTATGGTGGAGATAAATGTTTCTGAATTCAGTAAAATTGATTC CTAAGTATATTATCCTAATCCTGTTTGCTACAGTTGGTATAAAAAGGCATGAAATATGTATTCAATACCTCTTATGTAACCAAAACCATT TTTAATTAGCTTTTAAGGACTGAGAGAGCATCATGTTCAACTGGCATGCAGTCTGCCTGCATTGCCAATGAAGTCCTCAACTGTTTAATA TTTTGAACTAATATTATTTATAATCTATGAATTTAATCTTTTTTGAAAGACTTTAATAATTTGAGTCTCTGAGAGGATACTTTCAATTTC CATGGGGGACTTATTTGTTGGGGATCTTAAATAAGATTCCTTTTGATCTACCGGAATATACATGTACAGAGTACATTGGATCATGTTGGA AAGAAGGCAAGTGAAAAGGTCAGAGATGAAGTAGCAAAGTTATGGAATATCGTGGAAAGGATACTAGTTGTGAAATGGAAAGAGACAAGT TATAGTACCCCAAAAGCAAAACAAGCAGGAGATGCAAGAGATGCCCCAAAAGGACAAAGCAACAATTTTCTGTTGCCACCTTTATACCGG AAGACTCTGTTGTAGAAGAAAAGAAGGCTTTGGTGCACCTTATGTGGGAGGAGGAGGGGCAGGGCATGCTGATGCTGAGCGTACAGGCAG ACAAGAGCGTAGCCTGCTGTTGCCTCCATCACTATGAAATGACTTATTTTACCTGAAGGACCCATGGTTTATGTTCCTCTAATTCCTTTC ACTCTCCCTAAGCCCTCTGAGAGAGATGAAGATAGATGATTTTATTGCTACTAAATTGAAGGGAGCACTATTTCTTTTTGTCTTTTGTTA GCAAAAAATTGCAAAAAGAATTGTACATTCTTGCTAAAAATAAATAAATAAATAAAAAATTAAAAAAACAAGGGACCTAACAAAACTCAG CAGTGTTACTGTATTTTTAAAAAATATTTTTATAGACTCATTTTCAGGTTATTAAATGTAAGAGAAACAGATACCCCTCTTTTTTAAAGT AGGTAAATCATTGATGATTTATATTACCAATTTTTAGAAGTAATTTTCTAGTAAGCTTGTGGCATCAGAAAATACTAGAAGATTTTTTTA GTTAAATTAGTTAGAACATTTATGAATGAATATAATAAATATTTTTTCAGAATAAAATATGGACCCTTTGTGTTTACTAATAGATAAAGC CAGATATAATTTTTTGTTTTTAAGGCCACAAAATATGGCCTTTGTTAAAGAACACTAAAGTTAGAAATCTAAAGTTAGAGCAACTTTTTA ATGGCTATTTCCTATTATTGTAAGTGTTAAAACCCCTGCAGAATTCTTGATAAGGTGCTATTTATACTATATTTCTTATTATAAGATAAC TGTCTTTAGTCTTCTTAGTACTAGTCTTTTTAGTACTAAATCAATCAGTAAACATCATCATTTCACCCCAAAATTTTGTCACAGAAAAGG CGTATCAAATGAAAAATAATTTCAGAGATCTTTCTTTCAAGATATTTTTTCCTGATAAAATACATTGTCTTGAAGTAAATACATTGTCAA AACCTAATTGCAATTCTGTTAAATCTAAGTAATTTTTAGACAGTGTTTCACCGTATTATTTAGGATGTGAAATGCCATTTCTTTCACTGA TTACACCATATACAGGAAACAGGTAAAACAGTGAAAACTTTATTGTGCTGGTTGATGCCAACTTGGTTGAAAAGCTCTCTGCAGAAGAAG TGATCTAGACTGACAGAAGTGTTGCTAATTACAAGTTGTGTTCTCATGACGTAATTAGAAAGTAACTTCTCAAAGTACAACTTTTATGAA AAAAATAAGCTGTTAAAAAAAGGAAATCGTAGGTTAATTTAATTGGGAAAATGGGCAATTGACAGAGACCATTTTCCTAACACATATATG TGCTAGTACTTTAACTTTTTAAAATTTTACTTCTACGTTTTGTAATATAAAAATTTCTATTTTAAGTTTAGAATGTTATACGTACCGAAA GTATGCAGCCAAATCGATCAGATCAAACCATTTTACCTGGAGTTTGGTACTGGTTTTTACTTCTCTGAATCTGTATAAGAAAAATAAAGA >In-frame_ENST00000310053_ENST00000465804_TCGA-PD-A5DF-01A_HLTF_chr3_148777505_-_WWTR1_chr3_149260324_length(amino acids)=723AA_start in transcript=32_stop in transcript=2203 MDSRRLTFQSCAPDPALGICPRLQGCGAWKEAYRGGSKTIQGSRGAPLVIPLSAMSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPR FEFQDVIPPDDFLTSDEEVDSVLFGSLRGHVVGLRYYTGVVNNNEMVALQRDPNNPYDKNAIKVNNVNGNQVGHLKKELAGALAYIMDNK LAQIEGVVPFGANNAFTMPLHMTFWGKEENRKAVSDQLKKHGFKLGPAPKTLGFNLESGWGSGRAGPSYSMPVHAAVQMTTEQLKTEFDK LFEDLKEDDKTHEMEPAEAIETPLLPHQKQALAWMVSRENSKELPPFWEQRNDLYYNTITNFSEKDRPENVHGGILADDMGLGKTLTAIA VILTNFHDGRPLPIERVKKNLLKKEYNVNDDSMKLGGNNTSEKADGLSKDASRCSEQPSISDIKEKSKFRMSELSSSRPKRRKTAVQYIE SSDSEEIETSELPQKMKGKLKNVQSETKGRAKAGSSKVIEDVAFACALTSSVPTTKKKMLKKVMNHQHQQQMAPSTLSQQNHPTQNPPAG LMSMPNALTTQQQQQQKLRLQRIQMERERIRMRQEELMRQEAALCRQLPMEAETLAPVQAAVNPPTMTPDMRSITNNSSDPFLNGGPYHS REQSTDSGLGLGCYSVPTTPEDFLSNVDEMDTGENAGQTPMNINPQQTRFPDFLDCLPGTNVDLGTLESEDLIPLFNDVESALNKSEPFL -------------------------------------------------------------- >In-frame_ENST00000310053_ENST00000360632_TCGA-PD-A5DF-01A_HLTF_chr3_148777505_-_WWTR1_chr3_149260324_length(transcript)=2764nt_BP=1569nt TTGTTGCAGAAGGAGACGGCGTCGACGTCTGACTGGACTCGCGGCGACTTACCTTTCAGTCGTGCGCTCCTGATCCGGCGCTCGGAATTT GTCCCCGGCTTCAGGGCTGCGGGGCCTGGAAGGAGGCGTATCGAGGCGGCTCGAAAACGATCCAGGGGAGCCGAGGCGCTCCTCTTGTCA TCCCACTCAGCGCCATGTCCTGGATGTTCAAGAGGGATCCAGTTTGGAAGTACTTGCAGACTGTCCAGTATGGAGTTCATGGAAATTTTC CACGCCTCTCATATCCAACTTTCTTTCCACGTTTTGAATTCCAAGATGTTATCCCTCCAGATGACTTTCTAACTAGTGATGAAGAAGTAG ATTCCGTTTTATTTGGAAGTTTGAGAGGTCATGTGGTTGGACTACGCTATTACACGGGAGTAGTTAATAATAATGAAATGGTTGCATTAC AACGAGATCCTAATAACCCTTATGATAAGAATGCAATTAAAGTAAACAATGTGAATGGAAATCAAGTTGGCCATTTAAAGAAAGAGCTTG CAGGTGCTTTGGCCTATATCATGGACAACAAATTGGCACAAATTGAAGGGGTAGTTCCTTTTGGTGCAAACAATGCTTTTACCATGCCTC TGCATATGACTTTTTGGGGAAAAGAAGAAAATAGAAAAGCGGTTTCAGATCAGTTGAAGAAACATGGATTTAAATTGGGTCCTGCACCAA AAACTTTAGGATTCAATTTGGAAAGTGGTTGGGGCTCTGGAAGAGCTGGACCAAGCTATAGTATGCCAGTGCATGCTGCAGTACAGATGA CAACTGAACAGCTTAAAACAGAATTTGACAAATTGTTTGAAGATTTAAAAGAAGATGATAAAACCCATGAAATGGAACCAGCTGAGGCTA TTGAAACACCACTGCTTCCACATCAAAAACAAGCTCTAGCTTGGATGGTGTCACGGGAAAATAGCAAAGAACTTCCACCATTCTGGGAAC AGCGAAATGACTTATACTATAACACAATAACAAATTTTTCTGAGAAGGACCGACCAGAAAATGTCCATGGAGGAATTTTAGCTGATGATA TGGGTTTGGGTAAAACTCTTACGGCCATTGCAGTAATCCTTACCAACTTCCATGATGGCAGACCTCTTCCTATTGAAAGAGTTAAAAAGA ATCTACTGAAGAAGGAATATAATGTTAACGATGACTCTATGAAACTTGGAGGAAACAATACCAGTGAAAAGGCAGATGGACTAAGCAAAG ACGCATCTAGATGTAGTGAACAACCCAGTATTTCAGATATCAAGGAGAAGAGTAAGTTTCGCATGTCAGAATTGTCTAGCTCCCGCCCCA AAAGAAGAAAAACTGCTGTCCAGTACATAGAAAGCAGTGATTCAGAGGAAATTGAAACAAGTGAATTGCCGCAGAAAATGAAAGGCAAAC TGAAAAATGTACAGTCTGAAACTAAAGGCAGGGCGAAAGCAGGATCTTCTAAGGTTATAGAAGATGTGGCATTTGCATGTGCATTAACTT CATCTGTTCCTACAACAAAAAAGAAAATGTTGAAAAAGGTGATGAATCACCAACACCAGCAGCAGATGGCCCCCAGTACCCTGAGCCAGC AGAACCACCCCACTCAGAACCCACCCGCAGGGCTCATGAGTATGCCCAATGCGCTGACCACTCAGCAGCAGCAGCAGCAGAAACTGCGGC TTCAGAGAATCCAGATGGAGAGAGAAAGGATTCGAATGCGCCAAGAGGAGCTCATGAGGCAGGAAGCTGCCCTCTGTCGACAGCTCCCCA TGGAAGCTGAGACTCTTGCCCCAGTTCAGGCTGCTGTCAACCCACCCACGATGACCCCAGACATGAGATCCATCACTAATAATAGCTCAG ATCCTTTCCTCAATGGAGGGCCATATCATTCGAGGGAGCAGAGCACTGACAGTGGCCTGGGGTTAGGGTGCTACAGTGTCCCCACAACTC CGGAGGACTTCCTCAGCAATGTGGATGAGATGGATACAGGAGAAAACGCAGGACAAACACCCATGAACATCAATCCCCAACAGACCCGTT TCCCTGATTTCCTTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAGACCTGATCCCCCTCTTCAATGATGTAG AGTCTGCTCTGAACAAAAGTGAGCCCTTTCTAACCTGGCTGTAATCACTACCATTGTAACTTGGATGTAGCCATGACCTTACATTTCCTG GGCCTCTTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGC CAGTTTAATCATTGCCTGGTTTTGATTGAGAGTAACTTAAGTTAAACATAAATAAATATTCTATTTTCATTTTCTGCAAGCCTGCGTTCT TGTGACAGATTATACAGAATTGTGTCTGCAGGATTGATTATGCAGAATACTTTTCTCTTTCTTCTCTGCTGCCCCATGGCTAAGCTTTAT GGGTGTTAATTGAAATTTATACACCAATTGATTTTAAACCATAAAAAGCTGACCACAGGCAGTTACTTCTGAGGGCATCTTGGTCCAGGA AATGTGCACAAAATTCGACCTGATTTACAGTTTCAAAAACTGTATTGATGACAGTAGTACCAAATGCTTTAAAAACTATTTAACTTGAGC >In-frame_ENST00000310053_ENST00000360632_TCGA-PD-A5DF-01A_HLTF_chr3_148777505_-_WWTR1_chr3_149260324_length(amino acids)=723AA_start in transcript=32_stop in transcript=2203 MDSRRLTFQSCAPDPALGICPRLQGCGAWKEAYRGGSKTIQGSRGAPLVIPLSAMSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPR FEFQDVIPPDDFLTSDEEVDSVLFGSLRGHVVGLRYYTGVVNNNEMVALQRDPNNPYDKNAIKVNNVNGNQVGHLKKELAGALAYIMDNK LAQIEGVVPFGANNAFTMPLHMTFWGKEENRKAVSDQLKKHGFKLGPAPKTLGFNLESGWGSGRAGPSYSMPVHAAVQMTTEQLKTEFDK LFEDLKEDDKTHEMEPAEAIETPLLPHQKQALAWMVSRENSKELPPFWEQRNDLYYNTITNFSEKDRPENVHGGILADDMGLGKTLTAIA VILTNFHDGRPLPIERVKKNLLKKEYNVNDDSMKLGGNNTSEKADGLSKDASRCSEQPSISDIKEKSKFRMSELSSSRPKRRKTAVQYIE SSDSEEIETSELPQKMKGKLKNVQSETKGRAKAGSSKVIEDVAFACALTSSVPTTKKKMLKKVMNHQHQQQMAPSTLSQQNHPTQNPPAG LMSMPNALTTQQQQQQKLRLQRIQMERERIRMRQEELMRQEAALCRQLPMEAETLAPVQAAVNPPTMTPDMRSITNNSSDPFLNGGPYHS REQSTDSGLGLGCYSVPTTPEDFLSNVDEMDTGENAGQTPMNINPQQTRFPDFLDCLPGTNVDLGTLESEDLIPLFNDVESALNKSEPFL -------------------------------------------------------------- >In-frame_ENST00000310053_ENST00000467467_TCGA-PD-A5DF-01A_HLTF_chr3_148777505_-_WWTR1_chr3_149260324_length(transcript)=2399nt_BP=1569nt TTGTTGCAGAAGGAGACGGCGTCGACGTCTGACTGGACTCGCGGCGACTTACCTTTCAGTCGTGCGCTCCTGATCCGGCGCTCGGAATTT GTCCCCGGCTTCAGGGCTGCGGGGCCTGGAAGGAGGCGTATCGAGGCGGCTCGAAAACGATCCAGGGGAGCCGAGGCGCTCCTCTTGTCA TCCCACTCAGCGCCATGTCCTGGATGTTCAAGAGGGATCCAGTTTGGAAGTACTTGCAGACTGTCCAGTATGGAGTTCATGGAAATTTTC CACGCCTCTCATATCCAACTTTCTTTCCACGTTTTGAATTCCAAGATGTTATCCCTCCAGATGACTTTCTAACTAGTGATGAAGAAGTAG ATTCCGTTTTATTTGGAAGTTTGAGAGGTCATGTGGTTGGACTACGCTATTACACGGGAGTAGTTAATAATAATGAAATGGTTGCATTAC AACGAGATCCTAATAACCCTTATGATAAGAATGCAATTAAAGTAAACAATGTGAATGGAAATCAAGTTGGCCATTTAAAGAAAGAGCTTG CAGGTGCTTTGGCCTATATCATGGACAACAAATTGGCACAAATTGAAGGGGTAGTTCCTTTTGGTGCAAACAATGCTTTTACCATGCCTC TGCATATGACTTTTTGGGGAAAAGAAGAAAATAGAAAAGCGGTTTCAGATCAGTTGAAGAAACATGGATTTAAATTGGGTCCTGCACCAA AAACTTTAGGATTCAATTTGGAAAGTGGTTGGGGCTCTGGAAGAGCTGGACCAAGCTATAGTATGCCAGTGCATGCTGCAGTACAGATGA CAACTGAACAGCTTAAAACAGAATTTGACAAATTGTTTGAAGATTTAAAAGAAGATGATAAAACCCATGAAATGGAACCAGCTGAGGCTA TTGAAACACCACTGCTTCCACATCAAAAACAAGCTCTAGCTTGGATGGTGTCACGGGAAAATAGCAAAGAACTTCCACCATTCTGGGAAC AGCGAAATGACTTATACTATAACACAATAACAAATTTTTCTGAGAAGGACCGACCAGAAAATGTCCATGGAGGAATTTTAGCTGATGATA TGGGTTTGGGTAAAACTCTTACGGCCATTGCAGTAATCCTTACCAACTTCCATGATGGCAGACCTCTTCCTATTGAAAGAGTTAAAAAGA ATCTACTGAAGAAGGAATATAATGTTAACGATGACTCTATGAAACTTGGAGGAAACAATACCAGTGAAAAGGCAGATGGACTAAGCAAAG ACGCATCTAGATGTAGTGAACAACCCAGTATTTCAGATATCAAGGAGAAGAGTAAGTTTCGCATGTCAGAATTGTCTAGCTCCCGCCCCA AAAGAAGAAAAACTGCTGTCCAGTACATAGAAAGCAGTGATTCAGAGGAAATTGAAACAAGTGAATTGCCGCAGAAAATGAAAGGCAAAC TGAAAAATGTACAGTCTGAAACTAAAGGCAGGGCGAAAGCAGGATCTTCTAAGGTTATAGAAGATGTGGCATTTGCATGTGCATTAACTT CATCTGTTCCTACAACAAAAAAGAAAATGTTGAAAAAGGTGATGAATCACCAACACCAGCAGCAGATGGCCCCCAGTACCCTGAGCCAGC AGAACCACCCCACTCAGAACCCACCCGCAGGGCTCATGAGTATGCCCAATGCGCTGACCACTCAGCAGCAGCAGCAGCAGAAACTGCGGC TTCAGAGAATCCAGATGGAGAGAGAAAGGATTCGAATGCGCCAAGAGGAGCTCATGAGGCAGGAAGCTGCCCTCTGTCGACAGCTCCCCA TGGAAGCTGAGACTCTTGCCCCAGTTCAGGCTGCTGTCAACCCACCCACGATGACCCCAGACATGAGATCCATCACTAATAATAGCTCAG ATCCTTTCCTCAATGGAGGGCCATATCATTCGAGGGAGCAGAGCACTGACAGTGGCCTGGGGTTAGGGTGCTACAGTGTCCCCACAACTC CGGAGGACTTCCTCAGCAATGTGGATGAGATGGATACAGGAGAAAACGCAGGACAAACACCCATGAACATCAATCCCCAACAGACCCGTT TCCCTGATTTCCTTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAGACCTGATCCCCCTCTTCAATGATGTAG AGTCTGCTCTGAACAAAAGTGAGCCCTTTCTAACCTGGCTGTAATCACTACCATTGTAACTTGGATGTAGCCATGACCTTACATTTCCTG GGCCTCTTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGC >In-frame_ENST00000310053_ENST00000467467_TCGA-PD-A5DF-01A_HLTF_chr3_148777505_-_WWTR1_chr3_149260324_length(amino acids)=723AA_start in transcript=32_stop in transcript=2203 MDSRRLTFQSCAPDPALGICPRLQGCGAWKEAYRGGSKTIQGSRGAPLVIPLSAMSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPR FEFQDVIPPDDFLTSDEEVDSVLFGSLRGHVVGLRYYTGVVNNNEMVALQRDPNNPYDKNAIKVNNVNGNQVGHLKKELAGALAYIMDNK LAQIEGVVPFGANNAFTMPLHMTFWGKEENRKAVSDQLKKHGFKLGPAPKTLGFNLESGWGSGRAGPSYSMPVHAAVQMTTEQLKTEFDK LFEDLKEDDKTHEMEPAEAIETPLLPHQKQALAWMVSRENSKELPPFWEQRNDLYYNTITNFSEKDRPENVHGGILADDMGLGKTLTAIA VILTNFHDGRPLPIERVKKNLLKKEYNVNDDSMKLGGNNTSEKADGLSKDASRCSEQPSISDIKEKSKFRMSELSSSRPKRRKTAVQYIE SSDSEEIETSELPQKMKGKLKNVQSETKGRAKAGSSKVIEDVAFACALTSSVPTTKKKMLKKVMNHQHQQQMAPSTLSQQNHPTQNPPAG LMSMPNALTTQQQQQQKLRLQRIQMERERIRMRQEELMRQEAALCRQLPMEAETLAPVQAAVNPPTMTPDMRSITNNSSDPFLNGGPYHS REQSTDSGLGLGCYSVPTTPEDFLSNVDEMDTGENAGQTPMNINPQQTRFPDFLDCLPGTNVDLGTLESEDLIPLFNDVESALNKSEPFL -------------------------------------------------------------- >In-frame_ENST00000392912_ENST00000465804_TCGA-PD-A5DF-01A_HLTF_chr3_148777505_-_WWTR1_chr3_149260324_length(transcript)=5748nt_BP=1543nt GTCTGACTGGACTCGCGGCGACTTACCTTTCAGTCGTGCGCTCCTGATCCGGCGCTCGGAATTTGTCCCCGGCTTCAGGGCTGCGGGGCC TGGAAGGAGGCGTATCGAGGCGGCTCGAAAACGATCCAGGGGAGCCGAGGCGCTCCTCTTGTCATCCCACTCAGCGCCATGTCCTGGATG TTCAAGAGGGATCCAGTTTGGAAGTACTTGCAGACTGTCCAGTATGGAGTTCATGGAAATTTTCCACGCCTCTCATATCCAACTTTCTTT CCACGTTTTGAATTCCAAGATGTTATCCCTCCAGATGACTTTCTAACTAGTGATGAAGAAGTAGATTCCGTTTTATTTGGAAGTTTGAGA GGTCATGTGGTTGGACTACGCTATTACACGGGAGTAGTTAATAATAATGAAATGGTTGCATTACAACGAGATCCTAATAACCCTTATGAT AAGAATGCAATTAAAGTAAACAATGTGAATGGAAATCAAGTTGGCCATTTAAAGAAAGAGCTTGCAGGTGCTTTGGCCTATATCATGGAC AACAAATTGGCACAAATTGAAGGGGTAGTTCCTTTTGGTGCAAACAATGCTTTTACCATGCCTCTGCATATGACTTTTTGGGGAAAAGAA GAAAATAGAAAAGCGGTTTCAGATCAGTTGAAGAAACATGGATTTAAATTGGGTCCTGCACCAAAAACTTTAGGATTCAATTTGGAAAGT GGTTGGGGCTCTGGAAGAGCTGGACCAAGCTATAGTATGCCAGTGCATGCTGCAGTACAGATGACAACTGAACAGCTTAAAACAGAATTT GACAAATTGTTTGAAGATTTAAAAGAAGATGATAAAACCCATGAAATGGAACCAGCTGAGGCTATTGAAACACCACTGCTTCCACATCAA AAACAAGCTCTAGCTTGGATGGTGTCACGGGAAAATAGCAAAGAACTTCCACCATTCTGGGAACAGCGAAATGACTTATACTATAACACA ATAACAAATTTTTCTGAGAAGGACCGACCAGAAAATGTCCATGGAGGAATTTTAGCTGATGATATGGGTTTGGGTAAAACTCTTACGGCC ATTGCAGTAATCCTTACCAACTTCCATGATGGCAGACCTCTTCCTATTGAAAGAGTTAAAAAGAATCTACTGAAGAAGGAATATAATGTT AACGATGACTCTATGAAACTTGGAGGAAACAATACCAGTGAAAAGGCAGATGGACTAAGCAAAGACGCATCTAGATGTAGTGAACAACCC AGTATTTCAGATATCAAGGAGAAGAGTAAGTTTCGCATGTCAGAATTGTCTAGCTCCCGCCCCAAAAGAAGAAAAACTGCTGTCCAGTAC ATAGAAAGCAGTGATTCAGAGGAAATTGAAACAAGTGAATTGCCGCAGAAAATGAAAGGCAAACTGAAAAATGTACAGTCTGAAACTAAA GGCAGGGCGAAAGCAGGATCTTCTAAGGTTATAGAAGATGTGGCATTTGCATGTGCATTAACTTCATCTGTTCCTACAACAAAAAAGAAA ATGTTGAAAAAGGTGATGAATCACCAACACCAGCAGCAGATGGCCCCCAGTACCCTGAGCCAGCAGAACCACCCCACTCAGAACCCACCC GCAGGGCTCATGAGTATGCCCAATGCGCTGACCACTCAGCAGCAGCAGCAGCAGAAACTGCGGCTTCAGAGAATCCAGATGGAGAGAGAA AGGATTCGAATGCGCCAAGAGGAGCTCATGAGGCAGGAAGCTGCCCTCTGTCGACAGCTCCCCATGGAAGCTGAGACTCTTGCCCCAGTT CAGGCTGCTGTCAACCCACCCACGATGACCCCAGACATGAGATCCATCACTAATAATAGCTCAGATCCTTTCCTCAATGGAGGGCCATAT CATTCGAGGGAGCAGAGCACTGACAGTGGCCTGGGGTTAGGGTGCTACAGTGTCCCCACAACTCCGGAGGACTTCCTCAGCAATGTGGAT GAGATGGATACAGGAGAAAACGCAGGACAAACACCCATGAACATCAATCCCCAACAGACCCGTTTCCCTGATTTCCTTGACTGTCTTCCA GGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGCTCTGAACAAAAGTGAGCCC TTTCTAACCTGGCTGTAATCACTACCATTGTAACTTGGATGTAGCCATGACCTTACATTTCCTGGGCCTCTTGGAAAAAGTGATGGAGCA GAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCCAGTTTAATCATTGCCTGGTTTTGAT TGAGAGTAACTTAAGTTAAACATAAATAAATATTCTATTTTCATTTTCTGCAAGCCTGCGTTCTTGTGACAGATTATACAGAATTGTGTC TGCAGGATTGATTATGCAGAATACTTTTCTCTTTCTTCTCTGCTGCCCCATGGCTAAGCTTTATGGGTGTTAATTGAAATTTATACACCA ATTGATTTTAAACCATAAAAAGCTGACCACAGGCAGTTACTTCTGAGGGCATCTTGGTCCAGGAAATGTGCACAAAATTCGACCTGATTT ACAGTTTCAAAAACTGTATTGATGACAGTAGTACCAAATGCTTTAAAAACTATTTAACTTGAGCTTTAAAAATCATTGTATGGATAGTAA AATTCTACTGTATGGAATACAATGTAATTTTGAATCCATGCTGGCTCTGATGGCTCTTATTAGTCTGTATTTATAAAGGCACACAGTCCT ATTGTAGCTTATCTTTCGTTATTTTACTGCAGAGCATCTAGACAACTTAGTCCCTCCAGCGGGAAAGTAGCAGCAGCAGCATTAGTCACA GGTCTTACACTACAGATCTTGTGAAAGAGACCAGTTTGGTACTAATTATGAGCATTTTATTCAAACAAAAGTTTTTGAAATATTACAACT GGGGATTTAAAAAATTGCAGCTTAGAATCTGATGGTTTTTTTTTTTCTTGATGTTGTTTGTTTGTTTTTGAGATCGAGTTTTGCTCTTGT TGTCCAGGCTGGAATGCAATGGCACAATCTCGGCTCACTGCAACCTCTGCCTTCTGGGTTCAAGCGATTCTCCTGCCTTAGCCTCCCGAG TAGCTGGGATTACAGGCACCTGCCACCACGTCCGGCTAATTTTTTGTATTTTGAGTAGAGACGGGGTTTCACCATAATGGTCAGGCTGTT CTCAAACTCCTGATCTCAGGTGATCCACCCATCTCGGCCTCCCAAAGTGCTGGGATTACTGGCGTGAGCCACCGCACCCGGCCTTGATGT TTATTTTATAAAGCACTGTAATTTTGTAGCTGATGACAAAAGGCAGCCAAATGTTTTTGATAAATCAGTGGCAACTGTATTTTTGTCTTT TGAAATAACTCTGAAAACATCAGGACAACATAGATTTCAACCTGATAGCACACCACACACAGTGAGCTGTTGCTTTTTAAATTCTGAAGC CTTGTCAGGTTTGCTTCCTAGATTTCAAGTGTTTAAAATAATTCTATCTATGAAACTGAAGGATGAAGCAGATCTCTGACTGACATGTAA AAAAAAATGCCCTTTGAGGGTGTATGGTGGAGATAAATGTTTCTGAATTCAGTAAAATTGATTCCTAAGTATATTATCCTAATCCTGTTT GCTACAGTTGGTATAAAAAGGCATGAAATATGTATTCAATACCTCTTATGTAACCAAAACCATTTTTAATTAGCTTTTAAGGACTGAGAG AGCATCATGTTCAACTGGCATGCAGTCTGCCTGCATTGCCAATGAAGTCCTCAACTGTTTAATATTTTGAACTAATATTATTTATAATCT ATGAATTTAATCTTTTTTGAAAGACTTTAATAATTTGAGTCTCTGAGAGGATACTTTCAATTTCCATGGGGGACTTATTTGTTGGGGATC TTAAATAAGATTCCTTTTGATCTACCGGAATATACATGTACAGAGTACATTGGATCATGTTGGAAAGAAGGCAAGTGAAAAGGTCAGAGA TGAAGTAGCAAAGTTATGGAATATCGTGGAAAGGATACTAGTTGTGAAATGGAAAGAGACAAGTTATAGTACCCCAAAAGCAAAACAAGC AGGAGATGCAAGAGATGCCCCAAAAGGACAAAGCAACAATTTTCTGTTGCCACCTTTATACCGGAAGACTCTGTTGTAGAAGAAAAGAAG GCTTTGGTGCACCTTATGTGGGAGGAGGAGGGGCAGGGCATGCTGATGCTGAGCGTACAGGCAGACAAGAGCGTAGCCTGCTGTTGCCTC CATCACTATGAAATGACTTATTTTACCTGAAGGACCCATGGTTTATGTTCCTCTAATTCCTTTCACTCTCCCTAAGCCCTCTGAGAGAGA TGAAGATAGATGATTTTATTGCTACTAAATTGAAGGGAGCACTATTTCTTTTTGTCTTTTGTTAGCAAAAAATTGCAAAAAGAATTGTAC ATTCTTGCTAAAAATAAATAAATAAATAAAAAATTAAAAAAACAAGGGACCTAACAAAACTCAGCAGTGTTACTGTATTTTTAAAAAATA TTTTTATAGACTCATTTTCAGGTTATTAAATGTAAGAGAAACAGATACCCCTCTTTTTTAAAGTAGGTAAATCATTGATGATTTATATTA CCAATTTTTAGAAGTAATTTTCTAGTAAGCTTGTGGCATCAGAAAATACTAGAAGATTTTTTTAGTTAAATTAGTTAGAACATTTATGAA TGAATATAATAAATATTTTTTCAGAATAAAATATGGACCCTTTGTGTTTACTAATAGATAAAGCCAGATATAATTTTTTGTTTTTAAGGC CACAAAATATGGCCTTTGTTAAAGAACACTAAAGTTAGAAATCTAAAGTTAGAGCAACTTTTTAATGGCTATTTCCTATTATTGTAAGTG TTAAAACCCCTGCAGAATTCTTGATAAGGTGCTATTTATACTATATTTCTTATTATAAGATAACTGTCTTTAGTCTTCTTAGTACTAGTC TTTTTAGTACTAAATCAATCAGTAAACATCATCATTTCACCCCAAAATTTTGTCACAGAAAAGGCGTATCAAATGAAAAATAATTTCAGA GATCTTTCTTTCAAGATATTTTTTCCTGATAAAATACATTGTCTTGAAGTAAATACATTGTCAAAACCTAATTGCAATTCTGTTAAATCT AAGTAATTTTTAGACAGTGTTTCACCGTATTATTTAGGATGTGAAATGCCATTTCTTTCACTGATTACACCATATACAGGAAACAGGTAA AACAGTGAAAACTTTATTGTGCTGGTTGATGCCAACTTGGTTGAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCT AATTACAAGTTGTGTTCTCATGACGTAATTAGAAAGTAACTTCTCAAAGTACAACTTTTATGAAAAAAATAAGCTGTTAAAAAAAGGAAA TCGTAGGTTAATTTAATTGGGAAAATGGGCAATTGACAGAGACCATTTTCCTAACACATATATGTGCTAGTACTTTAACTTTTTAAAATT TTACTTCTACGTTTTGTAATATAAAAATTTCTATTTTAAGTTTAGAATGTTATACGTACCGAAAGTATGCAGCCAAATCGATCAGATCAA >In-frame_ENST00000392912_ENST00000465804_TCGA-PD-A5DF-01A_HLTF_chr3_148777505_-_WWTR1_chr3_149260324_length(amino acids)=723AA_start in transcript=6_stop in transcript=2177 MDSRRLTFQSCAPDPALGICPRLQGCGAWKEAYRGGSKTIQGSRGAPLVIPLSAMSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPR FEFQDVIPPDDFLTSDEEVDSVLFGSLRGHVVGLRYYTGVVNNNEMVALQRDPNNPYDKNAIKVNNVNGNQVGHLKKELAGALAYIMDNK LAQIEGVVPFGANNAFTMPLHMTFWGKEENRKAVSDQLKKHGFKLGPAPKTLGFNLESGWGSGRAGPSYSMPVHAAVQMTTEQLKTEFDK LFEDLKEDDKTHEMEPAEAIETPLLPHQKQALAWMVSRENSKELPPFWEQRNDLYYNTITNFSEKDRPENVHGGILADDMGLGKTLTAIA VILTNFHDGRPLPIERVKKNLLKKEYNVNDDSMKLGGNNTSEKADGLSKDASRCSEQPSISDIKEKSKFRMSELSSSRPKRRKTAVQYIE SSDSEEIETSELPQKMKGKLKNVQSETKGRAKAGSSKVIEDVAFACALTSSVPTTKKKMLKKVMNHQHQQQMAPSTLSQQNHPTQNPPAG LMSMPNALTTQQQQQQKLRLQRIQMERERIRMRQEELMRQEAALCRQLPMEAETLAPVQAAVNPPTMTPDMRSITNNSSDPFLNGGPYHS REQSTDSGLGLGCYSVPTTPEDFLSNVDEMDTGENAGQTPMNINPQQTRFPDFLDCLPGTNVDLGTLESEDLIPLFNDVESALNKSEPFL -------------------------------------------------------------- >In-frame_ENST00000392912_ENST00000360632_TCGA-PD-A5DF-01A_HLTF_chr3_148777505_-_WWTR1_chr3_149260324_length(transcript)=2738nt_BP=1543nt GTCTGACTGGACTCGCGGCGACTTACCTTTCAGTCGTGCGCTCCTGATCCGGCGCTCGGAATTTGTCCCCGGCTTCAGGGCTGCGGGGCC TGGAAGGAGGCGTATCGAGGCGGCTCGAAAACGATCCAGGGGAGCCGAGGCGCTCCTCTTGTCATCCCACTCAGCGCCATGTCCTGGATG TTCAAGAGGGATCCAGTTTGGAAGTACTTGCAGACTGTCCAGTATGGAGTTCATGGAAATTTTCCACGCCTCTCATATCCAACTTTCTTT CCACGTTTTGAATTCCAAGATGTTATCCCTCCAGATGACTTTCTAACTAGTGATGAAGAAGTAGATTCCGTTTTATTTGGAAGTTTGAGA GGTCATGTGGTTGGACTACGCTATTACACGGGAGTAGTTAATAATAATGAAATGGTTGCATTACAACGAGATCCTAATAACCCTTATGAT AAGAATGCAATTAAAGTAAACAATGTGAATGGAAATCAAGTTGGCCATTTAAAGAAAGAGCTTGCAGGTGCTTTGGCCTATATCATGGAC AACAAATTGGCACAAATTGAAGGGGTAGTTCCTTTTGGTGCAAACAATGCTTTTACCATGCCTCTGCATATGACTTTTTGGGGAAAAGAA GAAAATAGAAAAGCGGTTTCAGATCAGTTGAAGAAACATGGATTTAAATTGGGTCCTGCACCAAAAACTTTAGGATTCAATTTGGAAAGT GGTTGGGGCTCTGGAAGAGCTGGACCAAGCTATAGTATGCCAGTGCATGCTGCAGTACAGATGACAACTGAACAGCTTAAAACAGAATTT GACAAATTGTTTGAAGATTTAAAAGAAGATGATAAAACCCATGAAATGGAACCAGCTGAGGCTATTGAAACACCACTGCTTCCACATCAA AAACAAGCTCTAGCTTGGATGGTGTCACGGGAAAATAGCAAAGAACTTCCACCATTCTGGGAACAGCGAAATGACTTATACTATAACACA ATAACAAATTTTTCTGAGAAGGACCGACCAGAAAATGTCCATGGAGGAATTTTAGCTGATGATATGGGTTTGGGTAAAACTCTTACGGCC ATTGCAGTAATCCTTACCAACTTCCATGATGGCAGACCTCTTCCTATTGAAAGAGTTAAAAAGAATCTACTGAAGAAGGAATATAATGTT AACGATGACTCTATGAAACTTGGAGGAAACAATACCAGTGAAAAGGCAGATGGACTAAGCAAAGACGCATCTAGATGTAGTGAACAACCC AGTATTTCAGATATCAAGGAGAAGAGTAAGTTTCGCATGTCAGAATTGTCTAGCTCCCGCCCCAAAAGAAGAAAAACTGCTGTCCAGTAC ATAGAAAGCAGTGATTCAGAGGAAATTGAAACAAGTGAATTGCCGCAGAAAATGAAAGGCAAACTGAAAAATGTACAGTCTGAAACTAAA GGCAGGGCGAAAGCAGGATCTTCTAAGGTTATAGAAGATGTGGCATTTGCATGTGCATTAACTTCATCTGTTCCTACAACAAAAAAGAAA ATGTTGAAAAAGGTGATGAATCACCAACACCAGCAGCAGATGGCCCCCAGTACCCTGAGCCAGCAGAACCACCCCACTCAGAACCCACCC GCAGGGCTCATGAGTATGCCCAATGCGCTGACCACTCAGCAGCAGCAGCAGCAGAAACTGCGGCTTCAGAGAATCCAGATGGAGAGAGAA AGGATTCGAATGCGCCAAGAGGAGCTCATGAGGCAGGAAGCTGCCCTCTGTCGACAGCTCCCCATGGAAGCTGAGACTCTTGCCCCAGTT CAGGCTGCTGTCAACCCACCCACGATGACCCCAGACATGAGATCCATCACTAATAATAGCTCAGATCCTTTCCTCAATGGAGGGCCATAT CATTCGAGGGAGCAGAGCACTGACAGTGGCCTGGGGTTAGGGTGCTACAGTGTCCCCACAACTCCGGAGGACTTCCTCAGCAATGTGGAT GAGATGGATACAGGAGAAAACGCAGGACAAACACCCATGAACATCAATCCCCAACAGACCCGTTTCCCTGATTTCCTTGACTGTCTTCCA GGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGCTCTGAACAAAAGTGAGCCC TTTCTAACCTGGCTGTAATCACTACCATTGTAACTTGGATGTAGCCATGACCTTACATTTCCTGGGCCTCTTGGAAAAAGTGATGGAGCA GAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCCAGTTTAATCATTGCCTGGTTTTGAT TGAGAGTAACTTAAGTTAAACATAAATAAATATTCTATTTTCATTTTCTGCAAGCCTGCGTTCTTGTGACAGATTATACAGAATTGTGTC TGCAGGATTGATTATGCAGAATACTTTTCTCTTTCTTCTCTGCTGCCCCATGGCTAAGCTTTATGGGTGTTAATTGAAATTTATACACCA ATTGATTTTAAACCATAAAAAGCTGACCACAGGCAGTTACTTCTGAGGGCATCTTGGTCCAGGAAATGTGCACAAAATTCGACCTGATTT ACAGTTTCAAAAACTGTATTGATGACAGTAGTACCAAATGCTTTAAAAACTATTTAACTTGAGCTTTAAAAATCATTGTATGGATAGTAA >In-frame_ENST00000392912_ENST00000360632_TCGA-PD-A5DF-01A_HLTF_chr3_148777505_-_WWTR1_chr3_149260324_length(amino acids)=723AA_start in transcript=6_stop in transcript=2177 MDSRRLTFQSCAPDPALGICPRLQGCGAWKEAYRGGSKTIQGSRGAPLVIPLSAMSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPR FEFQDVIPPDDFLTSDEEVDSVLFGSLRGHVVGLRYYTGVVNNNEMVALQRDPNNPYDKNAIKVNNVNGNQVGHLKKELAGALAYIMDNK LAQIEGVVPFGANNAFTMPLHMTFWGKEENRKAVSDQLKKHGFKLGPAPKTLGFNLESGWGSGRAGPSYSMPVHAAVQMTTEQLKTEFDK LFEDLKEDDKTHEMEPAEAIETPLLPHQKQALAWMVSRENSKELPPFWEQRNDLYYNTITNFSEKDRPENVHGGILADDMGLGKTLTAIA VILTNFHDGRPLPIERVKKNLLKKEYNVNDDSMKLGGNNTSEKADGLSKDASRCSEQPSISDIKEKSKFRMSELSSSRPKRRKTAVQYIE SSDSEEIETSELPQKMKGKLKNVQSETKGRAKAGSSKVIEDVAFACALTSSVPTTKKKMLKKVMNHQHQQQMAPSTLSQQNHPTQNPPAG LMSMPNALTTQQQQQQKLRLQRIQMERERIRMRQEELMRQEAALCRQLPMEAETLAPVQAAVNPPTMTPDMRSITNNSSDPFLNGGPYHS REQSTDSGLGLGCYSVPTTPEDFLSNVDEMDTGENAGQTPMNINPQQTRFPDFLDCLPGTNVDLGTLESEDLIPLFNDVESALNKSEPFL -------------------------------------------------------------- >In-frame_ENST00000392912_ENST00000467467_TCGA-PD-A5DF-01A_HLTF_chr3_148777505_-_WWTR1_chr3_149260324_length(transcript)=2373nt_BP=1543nt GTCTGACTGGACTCGCGGCGACTTACCTTTCAGTCGTGCGCTCCTGATCCGGCGCTCGGAATTTGTCCCCGGCTTCAGGGCTGCGGGGCC TGGAAGGAGGCGTATCGAGGCGGCTCGAAAACGATCCAGGGGAGCCGAGGCGCTCCTCTTGTCATCCCACTCAGCGCCATGTCCTGGATG TTCAAGAGGGATCCAGTTTGGAAGTACTTGCAGACTGTCCAGTATGGAGTTCATGGAAATTTTCCACGCCTCTCATATCCAACTTTCTTT CCACGTTTTGAATTCCAAGATGTTATCCCTCCAGATGACTTTCTAACTAGTGATGAAGAAGTAGATTCCGTTTTATTTGGAAGTTTGAGA GGTCATGTGGTTGGACTACGCTATTACACGGGAGTAGTTAATAATAATGAAATGGTTGCATTACAACGAGATCCTAATAACCCTTATGAT AAGAATGCAATTAAAGTAAACAATGTGAATGGAAATCAAGTTGGCCATTTAAAGAAAGAGCTTGCAGGTGCTTTGGCCTATATCATGGAC AACAAATTGGCACAAATTGAAGGGGTAGTTCCTTTTGGTGCAAACAATGCTTTTACCATGCCTCTGCATATGACTTTTTGGGGAAAAGAA GAAAATAGAAAAGCGGTTTCAGATCAGTTGAAGAAACATGGATTTAAATTGGGTCCTGCACCAAAAACTTTAGGATTCAATTTGGAAAGT GGTTGGGGCTCTGGAAGAGCTGGACCAAGCTATAGTATGCCAGTGCATGCTGCAGTACAGATGACAACTGAACAGCTTAAAACAGAATTT GACAAATTGTTTGAAGATTTAAAAGAAGATGATAAAACCCATGAAATGGAACCAGCTGAGGCTATTGAAACACCACTGCTTCCACATCAA AAACAAGCTCTAGCTTGGATGGTGTCACGGGAAAATAGCAAAGAACTTCCACCATTCTGGGAACAGCGAAATGACTTATACTATAACACA ATAACAAATTTTTCTGAGAAGGACCGACCAGAAAATGTCCATGGAGGAATTTTAGCTGATGATATGGGTTTGGGTAAAACTCTTACGGCC ATTGCAGTAATCCTTACCAACTTCCATGATGGCAGACCTCTTCCTATTGAAAGAGTTAAAAAGAATCTACTGAAGAAGGAATATAATGTT AACGATGACTCTATGAAACTTGGAGGAAACAATACCAGTGAAAAGGCAGATGGACTAAGCAAAGACGCATCTAGATGTAGTGAACAACCC AGTATTTCAGATATCAAGGAGAAGAGTAAGTTTCGCATGTCAGAATTGTCTAGCTCCCGCCCCAAAAGAAGAAAAACTGCTGTCCAGTAC ATAGAAAGCAGTGATTCAGAGGAAATTGAAACAAGTGAATTGCCGCAGAAAATGAAAGGCAAACTGAAAAATGTACAGTCTGAAACTAAA GGCAGGGCGAAAGCAGGATCTTCTAAGGTTATAGAAGATGTGGCATTTGCATGTGCATTAACTTCATCTGTTCCTACAACAAAAAAGAAA ATGTTGAAAAAGGTGATGAATCACCAACACCAGCAGCAGATGGCCCCCAGTACCCTGAGCCAGCAGAACCACCCCACTCAGAACCCACCC GCAGGGCTCATGAGTATGCCCAATGCGCTGACCACTCAGCAGCAGCAGCAGCAGAAACTGCGGCTTCAGAGAATCCAGATGGAGAGAGAA AGGATTCGAATGCGCCAAGAGGAGCTCATGAGGCAGGAAGCTGCCCTCTGTCGACAGCTCCCCATGGAAGCTGAGACTCTTGCCCCAGTT CAGGCTGCTGTCAACCCACCCACGATGACCCCAGACATGAGATCCATCACTAATAATAGCTCAGATCCTTTCCTCAATGGAGGGCCATAT CATTCGAGGGAGCAGAGCACTGACAGTGGCCTGGGGTTAGGGTGCTACAGTGTCCCCACAACTCCGGAGGACTTCCTCAGCAATGTGGAT GAGATGGATACAGGAGAAAACGCAGGACAAACACCCATGAACATCAATCCCCAACAGACCCGTTTCCCTGATTTCCTTGACTGTCTTCCA GGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAGACCTGATCCCCCTCTTCAATGATGTAGAGTCTGCTCTGAACAAAAGTGAGCCC TTTCTAACCTGGCTGTAATCACTACCATTGTAACTTGGATGTAGCCATGACCTTACATTTCCTGGGCCTCTTGGAAAAAGTGATGGAGCA GAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACTCGTGCTCCCTCCTTTTTATGTTGCCAGTTTAATCATTGCCTGGTTTTGAT >In-frame_ENST00000392912_ENST00000467467_TCGA-PD-A5DF-01A_HLTF_chr3_148777505_-_WWTR1_chr3_149260324_length(amino acids)=723AA_start in transcript=6_stop in transcript=2177 MDSRRLTFQSCAPDPALGICPRLQGCGAWKEAYRGGSKTIQGSRGAPLVIPLSAMSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPR FEFQDVIPPDDFLTSDEEVDSVLFGSLRGHVVGLRYYTGVVNNNEMVALQRDPNNPYDKNAIKVNNVNGNQVGHLKKELAGALAYIMDNK LAQIEGVVPFGANNAFTMPLHMTFWGKEENRKAVSDQLKKHGFKLGPAPKTLGFNLESGWGSGRAGPSYSMPVHAAVQMTTEQLKTEFDK LFEDLKEDDKTHEMEPAEAIETPLLPHQKQALAWMVSRENSKELPPFWEQRNDLYYNTITNFSEKDRPENVHGGILADDMGLGKTLTAIA VILTNFHDGRPLPIERVKKNLLKKEYNVNDDSMKLGGNNTSEKADGLSKDASRCSEQPSISDIKEKSKFRMSELSSSRPKRRKTAVQYIE SSDSEEIETSELPQKMKGKLKNVQSETKGRAKAGSSKVIEDVAFACALTSSVPTTKKKMLKKVMNHQHQQQMAPSTLSQQNHPTQNPPAG LMSMPNALTTQQQQQQKLRLQRIQMERERIRMRQEELMRQEAALCRQLPMEAETLAPVQAAVNPPTMTPDMRSITNNSSDPFLNGGPYHS REQSTDSGLGLGCYSVPTTPEDFLSNVDEMDTGENAGQTPMNINPQQTRFPDFLDCLPGTNVDLGTLESEDLIPLFNDVESALNKSEPFL -------------------------------------------------------------- >In-frame_ENST00000494055_ENST00000465804_TCGA-PD-A5DF-01A_HLTF_chr3_148777505_-_WWTR1_chr3_149260324_length(transcript)=5798nt_BP=1593nt ACAGAGCGACGCTGGTCTCCCAGATTGTTGCAGAAGGAGACGGCGTCGACGTCTGACTGGACTCGCGGCGACTTACCTTTCAGTCGTGCG CTCCTGATCCGGCGCTCGGAATTTGTCCCCGGCTTCAGGGCTGCGGGGCCTGGAAGGAGGCGTATCGAGGCGGCTCGAAAACGATCCAGG GGAGCCGAGGCGCTCCTCTTGTCATCCCACTCAGCGCCATGTCCTGGATGTTCAAGAGGGATCCAGTTTGGAAGTACTTGCAGACTGTCC AGTATGGAGTTCATGGAAATTTTCCACGCCTCTCATATCCAACTTTCTTTCCACGTTTTGAATTCCAAGATGTTATCCCTCCAGATGACT TTCTAACTAGTGATGAAGAAGTAGATTCCGTTTTATTTGGAAGTTTGAGAGGTCATGTGGTTGGACTACGCTATTACACGGGAGTAGTTA ATAATAATGAAATGGTTGCATTACAACGAGATCCTAATAACCCTTATGATAAGAATGCAATTAAAGTAAACAATGTGAATGGAAATCAAG TTGGCCATTTAAAGAAAGAGCTTGCAGGTGCTTTGGCCTATATCATGGACAACAAATTGGCACAAATTGAAGGGGTAGTTCCTTTTGGTG CAAACAATGCTTTTACCATGCCTCTGCATATGACTTTTTGGGGAAAAGAAGAAAATAGAAAAGCGGTTTCAGATCAGTTGAAGAAACATG GATTTAAATTGGGTCCTGCACCAAAAACTTTAGGATTCAATTTGGAAAGTGGTTGGGGCTCTGGAAGAGCTGGACCAAGCTATAGTATGC CAGTGCATGCTGCAGTACAGATGACAACTGAACAGCTTAAAACAGAATTTGACAAATTGTTTGAAGATTTAAAAGAAGATGATAAAACCC ATGAAATGGAACCAGCTGAGGCTATTGAAACACCACTGCTTCCACATCAAAAACAAGCTCTAGCTTGGATGGTGTCACGGGAAAATAGCA AAGAACTTCCACCATTCTGGGAACAGCGAAATGACTTATACTATAACACAATAACAAATTTTTCTGAGAAGGACCGACCAGAAAATGTCC ATGGAGGAATTTTAGCTGATGATATGGGTTTGGGTAAAACTCTTACGGCCATTGCAGTAATCCTTACCAACTTCCATGATGGCAGACCTC TTCCTATTGAAAGAGTTAAAAAGAATCTACTGAAGAAGGAATATAATGTTAACGATGACTCTATGAAACTTGGAGGAAACAATACCAGTG AAAAGGCAGATGGACTAAGCAAAGACGCATCTAGATGTAGTGAACAACCCAGTATTTCAGATATCAAGGAGAAGAGTAAGTTTCGCATGT CAGAATTGTCTAGCTCCCGCCCCAAAAGAAGAAAAACTGCTGTCCAGTACATAGAAAGCAGTGATTCAGAGGAAATTGAAACAAGTGAAT TGCCGCAGAAAATGAAAGGCAAACTGAAAAATGTACAGTCTGAAACTAAAGGCAGGGCGAAAGCAGGATCTTCTAAGGTTATAGAAGATG TGGCATTTGCATGTGCATTAACTTCATCTGTTCCTACAACAAAAAAGAAAATGTTGAAAAAGGTGATGAATCACCAACACCAGCAGCAGA TGGCCCCCAGTACCCTGAGCCAGCAGAACCACCCCACTCAGAACCCACCCGCAGGGCTCATGAGTATGCCCAATGCGCTGACCACTCAGC AGCAGCAGCAGCAGAAACTGCGGCTTCAGAGAATCCAGATGGAGAGAGAAAGGATTCGAATGCGCCAAGAGGAGCTCATGAGGCAGGAAG CTGCCCTCTGTCGACAGCTCCCCATGGAAGCTGAGACTCTTGCCCCAGTTCAGGCTGCTGTCAACCCACCCACGATGACCCCAGACATGA GATCCATCACTAATAATAGCTCAGATCCTTTCCTCAATGGAGGGCCATATCATTCGAGGGAGCAGAGCACTGACAGTGGCCTGGGGTTAG GGTGCTACAGTGTCCCCACAACTCCGGAGGACTTCCTCAGCAATGTGGATGAGATGGATACAGGAGAAAACGCAGGACAAACACCCATGA ACATCAATCCCCAACAGACCCGTTTCCCTGATTTCCTTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAGACC TGATCCCCCTCTTCAATGATGTAGAGTCTGCTCTGAACAAAAGTGAGCCCTTTCTAACCTGGCTGTAATCACTACCATTGTAACTTGGAT GTAGCCATGACCTTACATTTCCTGGGCCTCTTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACT CGTGCTCCCTCCTTTTTATGTTGCCAGTTTAATCATTGCCTGGTTTTGATTGAGAGTAACTTAAGTTAAACATAAATAAATATTCTATTT TCATTTTCTGCAAGCCTGCGTTCTTGTGACAGATTATACAGAATTGTGTCTGCAGGATTGATTATGCAGAATACTTTTCTCTTTCTTCTC TGCTGCCCCATGGCTAAGCTTTATGGGTGTTAATTGAAATTTATACACCAATTGATTTTAAACCATAAAAAGCTGACCACAGGCAGTTAC TTCTGAGGGCATCTTGGTCCAGGAAATGTGCACAAAATTCGACCTGATTTACAGTTTCAAAAACTGTATTGATGACAGTAGTACCAAATG CTTTAAAAACTATTTAACTTGAGCTTTAAAAATCATTGTATGGATAGTAAAATTCTACTGTATGGAATACAATGTAATTTTGAATCCATG CTGGCTCTGATGGCTCTTATTAGTCTGTATTTATAAAGGCACACAGTCCTATTGTAGCTTATCTTTCGTTATTTTACTGCAGAGCATCTA GACAACTTAGTCCCTCCAGCGGGAAAGTAGCAGCAGCAGCATTAGTCACAGGTCTTACACTACAGATCTTGTGAAAGAGACCAGTTTGGT ACTAATTATGAGCATTTTATTCAAACAAAAGTTTTTGAAATATTACAACTGGGGATTTAAAAAATTGCAGCTTAGAATCTGATGGTTTTT TTTTTTCTTGATGTTGTTTGTTTGTTTTTGAGATCGAGTTTTGCTCTTGTTGTCCAGGCTGGAATGCAATGGCACAATCTCGGCTCACTG CAACCTCTGCCTTCTGGGTTCAAGCGATTCTCCTGCCTTAGCCTCCCGAGTAGCTGGGATTACAGGCACCTGCCACCACGTCCGGCTAAT TTTTTGTATTTTGAGTAGAGACGGGGTTTCACCATAATGGTCAGGCTGTTCTCAAACTCCTGATCTCAGGTGATCCACCCATCTCGGCCT CCCAAAGTGCTGGGATTACTGGCGTGAGCCACCGCACCCGGCCTTGATGTTTATTTTATAAAGCACTGTAATTTTGTAGCTGATGACAAA AGGCAGCCAAATGTTTTTGATAAATCAGTGGCAACTGTATTTTTGTCTTTTGAAATAACTCTGAAAACATCAGGACAACATAGATTTCAA CCTGATAGCACACCACACACAGTGAGCTGTTGCTTTTTAAATTCTGAAGCCTTGTCAGGTTTGCTTCCTAGATTTCAAGTGTTTAAAATA ATTCTATCTATGAAACTGAAGGATGAAGCAGATCTCTGACTGACATGTAAAAAAAAATGCCCTTTGAGGGTGTATGGTGGAGATAAATGT TTCTGAATTCAGTAAAATTGATTCCTAAGTATATTATCCTAATCCTGTTTGCTACAGTTGGTATAAAAAGGCATGAAATATGTATTCAAT ACCTCTTATGTAACCAAAACCATTTTTAATTAGCTTTTAAGGACTGAGAGAGCATCATGTTCAACTGGCATGCAGTCTGCCTGCATTGCC AATGAAGTCCTCAACTGTTTAATATTTTGAACTAATATTATTTATAATCTATGAATTTAATCTTTTTTGAAAGACTTTAATAATTTGAGT CTCTGAGAGGATACTTTCAATTTCCATGGGGGACTTATTTGTTGGGGATCTTAAATAAGATTCCTTTTGATCTACCGGAATATACATGTA CAGAGTACATTGGATCATGTTGGAAAGAAGGCAAGTGAAAAGGTCAGAGATGAAGTAGCAAAGTTATGGAATATCGTGGAAAGGATACTA GTTGTGAAATGGAAAGAGACAAGTTATAGTACCCCAAAAGCAAAACAAGCAGGAGATGCAAGAGATGCCCCAAAAGGACAAAGCAACAAT TTTCTGTTGCCACCTTTATACCGGAAGACTCTGTTGTAGAAGAAAAGAAGGCTTTGGTGCACCTTATGTGGGAGGAGGAGGGGCAGGGCA TGCTGATGCTGAGCGTACAGGCAGACAAGAGCGTAGCCTGCTGTTGCCTCCATCACTATGAAATGACTTATTTTACCTGAAGGACCCATG GTTTATGTTCCTCTAATTCCTTTCACTCTCCCTAAGCCCTCTGAGAGAGATGAAGATAGATGATTTTATTGCTACTAAATTGAAGGGAGC ACTATTTCTTTTTGTCTTTTGTTAGCAAAAAATTGCAAAAAGAATTGTACATTCTTGCTAAAAATAAATAAATAAATAAAAAATTAAAAA AACAAGGGACCTAACAAAACTCAGCAGTGTTACTGTATTTTTAAAAAATATTTTTATAGACTCATTTTCAGGTTATTAAATGTAAGAGAA ACAGATACCCCTCTTTTTTAAAGTAGGTAAATCATTGATGATTTATATTACCAATTTTTAGAAGTAATTTTCTAGTAAGCTTGTGGCATC AGAAAATACTAGAAGATTTTTTTAGTTAAATTAGTTAGAACATTTATGAATGAATATAATAAATATTTTTTCAGAATAAAATATGGACCC TTTGTGTTTACTAATAGATAAAGCCAGATATAATTTTTTGTTTTTAAGGCCACAAAATATGGCCTTTGTTAAAGAACACTAAAGTTAGAA ATCTAAAGTTAGAGCAACTTTTTAATGGCTATTTCCTATTATTGTAAGTGTTAAAACCCCTGCAGAATTCTTGATAAGGTGCTATTTATA CTATATTTCTTATTATAAGATAACTGTCTTTAGTCTTCTTAGTACTAGTCTTTTTAGTACTAAATCAATCAGTAAACATCATCATTTCAC CCCAAAATTTTGTCACAGAAAAGGCGTATCAAATGAAAAATAATTTCAGAGATCTTTCTTTCAAGATATTTTTTCCTGATAAAATACATT GTCTTGAAGTAAATACATTGTCAAAACCTAATTGCAATTCTGTTAAATCTAAGTAATTTTTAGACAGTGTTTCACCGTATTATTTAGGAT GTGAAATGCCATTTCTTTCACTGATTACACCATATACAGGAAACAGGTAAAACAGTGAAAACTTTATTGTGCTGGTTGATGCCAACTTGG TTGAAAAGCTCTCTGCAGAAGAAGTGATCTAGACTGACAGAAGTGTTGCTAATTACAAGTTGTGTTCTCATGACGTAATTAGAAAGTAAC TTCTCAAAGTACAACTTTTATGAAAAAAATAAGCTGTTAAAAAAAGGAAATCGTAGGTTAATTTAATTGGGAAAATGGGCAATTGACAGA GACCATTTTCCTAACACATATATGTGCTAGTACTTTAACTTTTTAAAATTTTACTTCTACGTTTTGTAATATAAAAATTTCTATTTTAAG TTTAGAATGTTATACGTACCGAAAGTATGCAGCCAAATCGATCAGATCAAACCATTTTACCTGGAGTTTGGTACTGGTTTTTACTTCTCT >In-frame_ENST00000494055_ENST00000465804_TCGA-PD-A5DF-01A_HLTF_chr3_148777505_-_WWTR1_chr3_149260324_length(amino acids)=723AA_start in transcript=56_stop in transcript=2227 MDSRRLTFQSCAPDPALGICPRLQGCGAWKEAYRGGSKTIQGSRGAPLVIPLSAMSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPR FEFQDVIPPDDFLTSDEEVDSVLFGSLRGHVVGLRYYTGVVNNNEMVALQRDPNNPYDKNAIKVNNVNGNQVGHLKKELAGALAYIMDNK LAQIEGVVPFGANNAFTMPLHMTFWGKEENRKAVSDQLKKHGFKLGPAPKTLGFNLESGWGSGRAGPSYSMPVHAAVQMTTEQLKTEFDK LFEDLKEDDKTHEMEPAEAIETPLLPHQKQALAWMVSRENSKELPPFWEQRNDLYYNTITNFSEKDRPENVHGGILADDMGLGKTLTAIA VILTNFHDGRPLPIERVKKNLLKKEYNVNDDSMKLGGNNTSEKADGLSKDASRCSEQPSISDIKEKSKFRMSELSSSRPKRRKTAVQYIE SSDSEEIETSELPQKMKGKLKNVQSETKGRAKAGSSKVIEDVAFACALTSSVPTTKKKMLKKVMNHQHQQQMAPSTLSQQNHPTQNPPAG LMSMPNALTTQQQQQQKLRLQRIQMERERIRMRQEELMRQEAALCRQLPMEAETLAPVQAAVNPPTMTPDMRSITNNSSDPFLNGGPYHS REQSTDSGLGLGCYSVPTTPEDFLSNVDEMDTGENAGQTPMNINPQQTRFPDFLDCLPGTNVDLGTLESEDLIPLFNDVESALNKSEPFL -------------------------------------------------------------- >In-frame_ENST00000494055_ENST00000360632_TCGA-PD-A5DF-01A_HLTF_chr3_148777505_-_WWTR1_chr3_149260324_length(transcript)=2788nt_BP=1593nt ACAGAGCGACGCTGGTCTCCCAGATTGTTGCAGAAGGAGACGGCGTCGACGTCTGACTGGACTCGCGGCGACTTACCTTTCAGTCGTGCG CTCCTGATCCGGCGCTCGGAATTTGTCCCCGGCTTCAGGGCTGCGGGGCCTGGAAGGAGGCGTATCGAGGCGGCTCGAAAACGATCCAGG GGAGCCGAGGCGCTCCTCTTGTCATCCCACTCAGCGCCATGTCCTGGATGTTCAAGAGGGATCCAGTTTGGAAGTACTTGCAGACTGTCC AGTATGGAGTTCATGGAAATTTTCCACGCCTCTCATATCCAACTTTCTTTCCACGTTTTGAATTCCAAGATGTTATCCCTCCAGATGACT TTCTAACTAGTGATGAAGAAGTAGATTCCGTTTTATTTGGAAGTTTGAGAGGTCATGTGGTTGGACTACGCTATTACACGGGAGTAGTTA ATAATAATGAAATGGTTGCATTACAACGAGATCCTAATAACCCTTATGATAAGAATGCAATTAAAGTAAACAATGTGAATGGAAATCAAG TTGGCCATTTAAAGAAAGAGCTTGCAGGTGCTTTGGCCTATATCATGGACAACAAATTGGCACAAATTGAAGGGGTAGTTCCTTTTGGTG CAAACAATGCTTTTACCATGCCTCTGCATATGACTTTTTGGGGAAAAGAAGAAAATAGAAAAGCGGTTTCAGATCAGTTGAAGAAACATG GATTTAAATTGGGTCCTGCACCAAAAACTTTAGGATTCAATTTGGAAAGTGGTTGGGGCTCTGGAAGAGCTGGACCAAGCTATAGTATGC CAGTGCATGCTGCAGTACAGATGACAACTGAACAGCTTAAAACAGAATTTGACAAATTGTTTGAAGATTTAAAAGAAGATGATAAAACCC ATGAAATGGAACCAGCTGAGGCTATTGAAACACCACTGCTTCCACATCAAAAACAAGCTCTAGCTTGGATGGTGTCACGGGAAAATAGCA AAGAACTTCCACCATTCTGGGAACAGCGAAATGACTTATACTATAACACAATAACAAATTTTTCTGAGAAGGACCGACCAGAAAATGTCC ATGGAGGAATTTTAGCTGATGATATGGGTTTGGGTAAAACTCTTACGGCCATTGCAGTAATCCTTACCAACTTCCATGATGGCAGACCTC TTCCTATTGAAAGAGTTAAAAAGAATCTACTGAAGAAGGAATATAATGTTAACGATGACTCTATGAAACTTGGAGGAAACAATACCAGTG AAAAGGCAGATGGACTAAGCAAAGACGCATCTAGATGTAGTGAACAACCCAGTATTTCAGATATCAAGGAGAAGAGTAAGTTTCGCATGT CAGAATTGTCTAGCTCCCGCCCCAAAAGAAGAAAAACTGCTGTCCAGTACATAGAAAGCAGTGATTCAGAGGAAATTGAAACAAGTGAAT TGCCGCAGAAAATGAAAGGCAAACTGAAAAATGTACAGTCTGAAACTAAAGGCAGGGCGAAAGCAGGATCTTCTAAGGTTATAGAAGATG TGGCATTTGCATGTGCATTAACTTCATCTGTTCCTACAACAAAAAAGAAAATGTTGAAAAAGGTGATGAATCACCAACACCAGCAGCAGA TGGCCCCCAGTACCCTGAGCCAGCAGAACCACCCCACTCAGAACCCACCCGCAGGGCTCATGAGTATGCCCAATGCGCTGACCACTCAGC AGCAGCAGCAGCAGAAACTGCGGCTTCAGAGAATCCAGATGGAGAGAGAAAGGATTCGAATGCGCCAAGAGGAGCTCATGAGGCAGGAAG CTGCCCTCTGTCGACAGCTCCCCATGGAAGCTGAGACTCTTGCCCCAGTTCAGGCTGCTGTCAACCCACCCACGATGACCCCAGACATGA GATCCATCACTAATAATAGCTCAGATCCTTTCCTCAATGGAGGGCCATATCATTCGAGGGAGCAGAGCACTGACAGTGGCCTGGGGTTAG GGTGCTACAGTGTCCCCACAACTCCGGAGGACTTCCTCAGCAATGTGGATGAGATGGATACAGGAGAAAACGCAGGACAAACACCCATGA ACATCAATCCCCAACAGACCCGTTTCCCTGATTTCCTTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAGACC TGATCCCCCTCTTCAATGATGTAGAGTCTGCTCTGAACAAAAGTGAGCCCTTTCTAACCTGGCTGTAATCACTACCATTGTAACTTGGAT GTAGCCATGACCTTACATTTCCTGGGCCTCTTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACT CGTGCTCCCTCCTTTTTATGTTGCCAGTTTAATCATTGCCTGGTTTTGATTGAGAGTAACTTAAGTTAAACATAAATAAATATTCTATTT TCATTTTCTGCAAGCCTGCGTTCTTGTGACAGATTATACAGAATTGTGTCTGCAGGATTGATTATGCAGAATACTTTTCTCTTTCTTCTC TGCTGCCCCATGGCTAAGCTTTATGGGTGTTAATTGAAATTTATACACCAATTGATTTTAAACCATAAAAAGCTGACCACAGGCAGTTAC TTCTGAGGGCATCTTGGTCCAGGAAATGTGCACAAAATTCGACCTGATTTACAGTTTCAAAAACTGTATTGATGACAGTAGTACCAAATG >In-frame_ENST00000494055_ENST00000360632_TCGA-PD-A5DF-01A_HLTF_chr3_148777505_-_WWTR1_chr3_149260324_length(amino acids)=723AA_start in transcript=56_stop in transcript=2227 MDSRRLTFQSCAPDPALGICPRLQGCGAWKEAYRGGSKTIQGSRGAPLVIPLSAMSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPR FEFQDVIPPDDFLTSDEEVDSVLFGSLRGHVVGLRYYTGVVNNNEMVALQRDPNNPYDKNAIKVNNVNGNQVGHLKKELAGALAYIMDNK LAQIEGVVPFGANNAFTMPLHMTFWGKEENRKAVSDQLKKHGFKLGPAPKTLGFNLESGWGSGRAGPSYSMPVHAAVQMTTEQLKTEFDK LFEDLKEDDKTHEMEPAEAIETPLLPHQKQALAWMVSRENSKELPPFWEQRNDLYYNTITNFSEKDRPENVHGGILADDMGLGKTLTAIA VILTNFHDGRPLPIERVKKNLLKKEYNVNDDSMKLGGNNTSEKADGLSKDASRCSEQPSISDIKEKSKFRMSELSSSRPKRRKTAVQYIE SSDSEEIETSELPQKMKGKLKNVQSETKGRAKAGSSKVIEDVAFACALTSSVPTTKKKMLKKVMNHQHQQQMAPSTLSQQNHPTQNPPAG LMSMPNALTTQQQQQQKLRLQRIQMERERIRMRQEELMRQEAALCRQLPMEAETLAPVQAAVNPPTMTPDMRSITNNSSDPFLNGGPYHS REQSTDSGLGLGCYSVPTTPEDFLSNVDEMDTGENAGQTPMNINPQQTRFPDFLDCLPGTNVDLGTLESEDLIPLFNDVESALNKSEPFL -------------------------------------------------------------- >In-frame_ENST00000494055_ENST00000467467_TCGA-PD-A5DF-01A_HLTF_chr3_148777505_-_WWTR1_chr3_149260324_length(transcript)=2423nt_BP=1593nt ACAGAGCGACGCTGGTCTCCCAGATTGTTGCAGAAGGAGACGGCGTCGACGTCTGACTGGACTCGCGGCGACTTACCTTTCAGTCGTGCG CTCCTGATCCGGCGCTCGGAATTTGTCCCCGGCTTCAGGGCTGCGGGGCCTGGAAGGAGGCGTATCGAGGCGGCTCGAAAACGATCCAGG GGAGCCGAGGCGCTCCTCTTGTCATCCCACTCAGCGCCATGTCCTGGATGTTCAAGAGGGATCCAGTTTGGAAGTACTTGCAGACTGTCC AGTATGGAGTTCATGGAAATTTTCCACGCCTCTCATATCCAACTTTCTTTCCACGTTTTGAATTCCAAGATGTTATCCCTCCAGATGACT TTCTAACTAGTGATGAAGAAGTAGATTCCGTTTTATTTGGAAGTTTGAGAGGTCATGTGGTTGGACTACGCTATTACACGGGAGTAGTTA ATAATAATGAAATGGTTGCATTACAACGAGATCCTAATAACCCTTATGATAAGAATGCAATTAAAGTAAACAATGTGAATGGAAATCAAG TTGGCCATTTAAAGAAAGAGCTTGCAGGTGCTTTGGCCTATATCATGGACAACAAATTGGCACAAATTGAAGGGGTAGTTCCTTTTGGTG CAAACAATGCTTTTACCATGCCTCTGCATATGACTTTTTGGGGAAAAGAAGAAAATAGAAAAGCGGTTTCAGATCAGTTGAAGAAACATG GATTTAAATTGGGTCCTGCACCAAAAACTTTAGGATTCAATTTGGAAAGTGGTTGGGGCTCTGGAAGAGCTGGACCAAGCTATAGTATGC CAGTGCATGCTGCAGTACAGATGACAACTGAACAGCTTAAAACAGAATTTGACAAATTGTTTGAAGATTTAAAAGAAGATGATAAAACCC ATGAAATGGAACCAGCTGAGGCTATTGAAACACCACTGCTTCCACATCAAAAACAAGCTCTAGCTTGGATGGTGTCACGGGAAAATAGCA AAGAACTTCCACCATTCTGGGAACAGCGAAATGACTTATACTATAACACAATAACAAATTTTTCTGAGAAGGACCGACCAGAAAATGTCC ATGGAGGAATTTTAGCTGATGATATGGGTTTGGGTAAAACTCTTACGGCCATTGCAGTAATCCTTACCAACTTCCATGATGGCAGACCTC TTCCTATTGAAAGAGTTAAAAAGAATCTACTGAAGAAGGAATATAATGTTAACGATGACTCTATGAAACTTGGAGGAAACAATACCAGTG AAAAGGCAGATGGACTAAGCAAAGACGCATCTAGATGTAGTGAACAACCCAGTATTTCAGATATCAAGGAGAAGAGTAAGTTTCGCATGT CAGAATTGTCTAGCTCCCGCCCCAAAAGAAGAAAAACTGCTGTCCAGTACATAGAAAGCAGTGATTCAGAGGAAATTGAAACAAGTGAAT TGCCGCAGAAAATGAAAGGCAAACTGAAAAATGTACAGTCTGAAACTAAAGGCAGGGCGAAAGCAGGATCTTCTAAGGTTATAGAAGATG TGGCATTTGCATGTGCATTAACTTCATCTGTTCCTACAACAAAAAAGAAAATGTTGAAAAAGGTGATGAATCACCAACACCAGCAGCAGA TGGCCCCCAGTACCCTGAGCCAGCAGAACCACCCCACTCAGAACCCACCCGCAGGGCTCATGAGTATGCCCAATGCGCTGACCACTCAGC AGCAGCAGCAGCAGAAACTGCGGCTTCAGAGAATCCAGATGGAGAGAGAAAGGATTCGAATGCGCCAAGAGGAGCTCATGAGGCAGGAAG CTGCCCTCTGTCGACAGCTCCCCATGGAAGCTGAGACTCTTGCCCCAGTTCAGGCTGCTGTCAACCCACCCACGATGACCCCAGACATGA GATCCATCACTAATAATAGCTCAGATCCTTTCCTCAATGGAGGGCCATATCATTCGAGGGAGCAGAGCACTGACAGTGGCCTGGGGTTAG GGTGCTACAGTGTCCCCACAACTCCGGAGGACTTCCTCAGCAATGTGGATGAGATGGATACAGGAGAAAACGCAGGACAAACACCCATGA ACATCAATCCCCAACAGACCCGTTTCCCTGATTTCCTTGACTGTCTTCCAGGAACAAACGTTGACTTAGGAACTTTGGAATCTGAAGACC TGATCCCCCTCTTCAATGATGTAGAGTCTGCTCTGAACAAAAGTGAGCCCTTTCTAACCTGGCTGTAATCACTACCATTGTAACTTGGAT GTAGCCATGACCTTACATTTCCTGGGCCTCTTGGAAAAAGTGATGGAGCAGAGCAAGTCTGCAGGTGCACCACTTCCCGCCTCCATGACT >In-frame_ENST00000494055_ENST00000467467_TCGA-PD-A5DF-01A_HLTF_chr3_148777505_-_WWTR1_chr3_149260324_length(amino acids)=723AA_start in transcript=56_stop in transcript=2227 MDSRRLTFQSCAPDPALGICPRLQGCGAWKEAYRGGSKTIQGSRGAPLVIPLSAMSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPR FEFQDVIPPDDFLTSDEEVDSVLFGSLRGHVVGLRYYTGVVNNNEMVALQRDPNNPYDKNAIKVNNVNGNQVGHLKKELAGALAYIMDNK LAQIEGVVPFGANNAFTMPLHMTFWGKEENRKAVSDQLKKHGFKLGPAPKTLGFNLESGWGSGRAGPSYSMPVHAAVQMTTEQLKTEFDK LFEDLKEDDKTHEMEPAEAIETPLLPHQKQALAWMVSRENSKELPPFWEQRNDLYYNTITNFSEKDRPENVHGGILADDMGLGKTLTAIA VILTNFHDGRPLPIERVKKNLLKKEYNVNDDSMKLGGNNTSEKADGLSKDASRCSEQPSISDIKEKSKFRMSELSSSRPKRRKTAVQYIE SSDSEEIETSELPQKMKGKLKNVQSETKGRAKAGSSKVIEDVAFACALTSSVPTTKKKMLKKVMNHQHQQQMAPSTLSQQNHPTQNPPAG LMSMPNALTTQQQQQQKLRLQRIQMERERIRMRQEELMRQEAALCRQLPMEAETLAPVQAAVNPPTMTPDMRSITNNSSDPFLNGGPYHS REQSTDSGLGLGCYSVPTTPEDFLSNVDEMDTGENAGQTPMNINPQQTRFPDFLDCLPGTNVDLGTLESEDLIPLFNDVESALNKSEPFL -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for HLTF-WWTR1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000310053 | - | 13 | 25 | 925_1009 | 458.3333333333333 | 1010.0 | SP1 and SP3 |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000392912 | - | 13 | 26 | 925_1009 | 458.3333333333333 | 1161.6666666666667 | SP1 and SP3 |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000465259 | - | 13 | 25 | 925_1009 | 457.3333333333333 | 1009.0 | SP1 and SP3 |
Hgene | HLTF | chr3:148777505 | chr3:149260324 | ENST00000494055 | - | 13 | 26 | 925_1009 | 458.3333333333333 | 1040.6666666666667 | SP1 and SP3 |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for HLTF-WWTR1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for HLTF-WWTR1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | HLTF | C0022665 | Kidney Neoplasm | 1 | CTD_human |
Hgene | HLTF | C0740457 | Malignant neoplasm of kidney | 1 | CTD_human |
Tgene | WWTR1 | C0026846 | Muscular Atrophy | 1 | CTD_human |
Tgene | WWTR1 | C0206655 | Alveolar rhabdomyosarcoma | 1 | CTD_human |
Tgene | WWTR1 | C0206732 | Epithelioid hemangioendothelioma | 1 | ORPHANET |
Tgene | WWTR1 | C0270948 | Neurogenic Muscular Atrophy | 1 | CTD_human |