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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:HOOK2-NFIX (FusionGDB2 ID:37222) |
Fusion Gene Summary for HOOK2-NFIX |
Fusion gene summary |
Fusion gene information | Fusion gene name: HOOK2-NFIX | Fusion gene ID: 37222 | Hgene | Tgene | Gene symbol | HOOK2 | NFIX | Gene ID | 29911 | 4784 |
Gene name | hook microtubule tethering protein 2 | nuclear factor I X | |
Synonyms | HK2 | CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2 | |
Cytomap | 19p13.13 | 19p13.13 | |
Type of gene | protein-coding | protein-coding | |
Description | protein Hook homolog 2h-hook2hHK2hook homolog 2 | nuclear factor 1 X-typeCCAAT-box-binding transcription factorTGGCA-binding proteinnuclear factor 1/X | |
Modification date | 20200327 | 20200329 | |
UniProtAcc | . | Q14938 | |
Ensembl transtripts involved in fusion gene | ENST00000397668, ENST00000264827, ENST00000589965, | ENST00000397661, ENST00000592199, ENST00000587760, ENST00000585575, ENST00000360105, ENST00000588228, ENST00000587260, ENST00000358552, ENST00000588680, | |
Fusion gene scores | * DoF score | 7 X 8 X 6=336 | 22 X 13 X 10=2860 |
# samples | 9 | 26 | |
** MAII score | log2(9/336*10)=-1.90046432644909 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(26/2860*10)=-3.4594316186373 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: HOOK2 [Title/Abstract] AND NFIX [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | HOOK2(12885483)-NFIX(13135835), # samples:3 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | NFIX | GO:0000122 | negative regulation of transcription by RNA polymerase II | 19706729 |
Tgene | NFIX | GO:0045944 | positive regulation of transcription by RNA polymerase II | 19706729 |
Fusion gene breakpoints across HOOK2 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across NFIX (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | BRCA | TCGA-S3-AA0Z-01A | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
ChimerDB4 | BRCA | TCGA-S3-AA0Z-01A | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
ChimerDB4 | BRCA | TCGA-S3-AA0Z-01A | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
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Fusion Gene ORF analysis for HOOK2-NFIX |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000397668 | ENST00000397661 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
In-frame | ENST00000397668 | ENST00000592199 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
In-frame | ENST00000397668 | ENST00000587760 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
In-frame | ENST00000397668 | ENST00000585575 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
In-frame | ENST00000397668 | ENST00000360105 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
5CDS-5UTR | ENST00000397668 | ENST00000588228 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
5CDS-5UTR | ENST00000397668 | ENST00000587260 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
5CDS-5UTR | ENST00000397668 | ENST00000358552 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
5CDS-intron | ENST00000397668 | ENST00000588680 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
In-frame | ENST00000264827 | ENST00000397661 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
In-frame | ENST00000264827 | ENST00000592199 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
In-frame | ENST00000264827 | ENST00000587760 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
In-frame | ENST00000264827 | ENST00000585575 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
In-frame | ENST00000264827 | ENST00000360105 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
5CDS-5UTR | ENST00000264827 | ENST00000588228 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
5CDS-5UTR | ENST00000264827 | ENST00000587260 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
5CDS-5UTR | ENST00000264827 | ENST00000358552 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
5CDS-intron | ENST00000264827 | ENST00000588680 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
intron-3CDS | ENST00000589965 | ENST00000397661 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
intron-3CDS | ENST00000589965 | ENST00000592199 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
intron-3CDS | ENST00000589965 | ENST00000587760 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
intron-3CDS | ENST00000589965 | ENST00000585575 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
intron-3CDS | ENST00000589965 | ENST00000360105 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
intron-5UTR | ENST00000589965 | ENST00000588228 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
intron-5UTR | ENST00000589965 | ENST00000587260 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
intron-5UTR | ENST00000589965 | ENST00000358552 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
intron-intron | ENST00000589965 | ENST00000588680 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000397668 | HOOK2 | chr19 | 12885483 | - | ENST00000397661 | NFIX | chr19 | 13135835 | + | 3164 | 278 | 74 | 1576 | 500 |
ENST00000397668 | HOOK2 | chr19 | 12885483 | - | ENST00000592199 | NFIX | chr19 | 13135835 | + | 1760 | 278 | 74 | 1759 | 562 |
ENST00000397668 | HOOK2 | chr19 | 12885483 | - | ENST00000587760 | NFIX | chr19 | 13135835 | + | 1721 | 278 | 74 | 1576 | 500 |
ENST00000397668 | HOOK2 | chr19 | 12885483 | - | ENST00000585575 | NFIX | chr19 | 13135835 | + | 1760 | 278 | 74 | 1759 | 562 |
ENST00000397668 | HOOK2 | chr19 | 12885483 | - | ENST00000360105 | NFIX | chr19 | 13135835 | + | 5636 | 278 | 74 | 1453 | 459 |
ENST00000264827 | HOOK2 | chr19 | 12885483 | - | ENST00000397661 | NFIX | chr19 | 13135835 | + | 3261 | 375 | 171 | 1673 | 500 |
ENST00000264827 | HOOK2 | chr19 | 12885483 | - | ENST00000592199 | NFIX | chr19 | 13135835 | + | 1857 | 375 | 171 | 1856 | 561 |
ENST00000264827 | HOOK2 | chr19 | 12885483 | - | ENST00000587760 | NFIX | chr19 | 13135835 | + | 1818 | 375 | 171 | 1673 | 500 |
ENST00000264827 | HOOK2 | chr19 | 12885483 | - | ENST00000585575 | NFIX | chr19 | 13135835 | + | 1857 | 375 | 171 | 1856 | 561 |
ENST00000264827 | HOOK2 | chr19 | 12885483 | - | ENST00000360105 | NFIX | chr19 | 13135835 | + | 5733 | 375 | 171 | 1550 | 459 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000397668 | ENST00000397661 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + | 0.028239865 | 0.97176015 |
ENST00000397668 | ENST00000592199 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + | 0.037604682 | 0.9623953 |
ENST00000397668 | ENST00000587760 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + | 0.040746316 | 0.95925367 |
ENST00000397668 | ENST00000585575 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + | 0.037604682 | 0.9623953 |
ENST00000397668 | ENST00000360105 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + | 0.008028663 | 0.9919714 |
ENST00000264827 | ENST00000397661 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + | 0.026932929 | 0.9730671 |
ENST00000264827 | ENST00000592199 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + | 0.036792073 | 0.96320796 |
ENST00000264827 | ENST00000587760 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + | 0.037225295 | 0.9627747 |
ENST00000264827 | ENST00000585575 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + | 0.036792073 | 0.96320796 |
ENST00000264827 | ENST00000360105 | HOOK2 | chr19 | 12885483 | - | NFIX | chr19 | 13135835 | + | 0.007901084 | 0.9920989 |
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Fusion Genomic Features for HOOK2-NFIX |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
HOOK2 | chr19 | 12885482 | - | NFIX | chr19 | 13135834 | + | 7.97E-07 | 0.99999917 |
HOOK2 | chr19 | 12885482 | - | NFIX | chr19 | 13135834 | + | 7.97E-07 | 0.99999917 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for HOOK2-NFIX |
Go to FGviewer for the breakpoints of chr19:12885483-chr19:13135835 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | NFIX |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Recognizes and binds the palindromic sequence 5'-TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | NFIX | chr19:12885483 | chr19:13135835 | ENST00000585575 | 0 | 11 | 1_194 | 1.0 | 495.0 | DNA binding | CTF/NF-I | |
Tgene | NFIX | chr19:12885483 | chr19:13135835 | ENST00000587260 | 0 | 9 | 1_194 | 0 | 281.6666666666667 | DNA binding | CTF/NF-I | |
Tgene | NFIX | chr19:12885483 | chr19:13135835 | ENST00000587760 | 0 | 10 | 1_194 | 1.0 | 460.6666666666667 | DNA binding | CTF/NF-I | |
Tgene | NFIX | chr19:12885483 | chr19:13135835 | ENST00000397661 | 0 | 10 | 398_406 | 9.0 | 878.6666666666666 | Motif | 9aaTAD | |
Tgene | NFIX | chr19:12885483 | chr19:13135835 | ENST00000585575 | 0 | 11 | 398_406 | 1.0 | 495.0 | Motif | 9aaTAD | |
Tgene | NFIX | chr19:12885483 | chr19:13135835 | ENST00000587260 | 0 | 9 | 398_406 | 0 | 281.6666666666667 | Motif | 9aaTAD | |
Tgene | NFIX | chr19:12885483 | chr19:13135835 | ENST00000587760 | 0 | 10 | 398_406 | 1.0 | 460.6666666666667 | Motif | 9aaTAD | |
Tgene | NFIX | chr19:12885483 | chr19:13135835 | ENST00000592199 | 0 | 11 | 398_406 | 9.0 | 503.0 | Motif | 9aaTAD |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | HOOK2 | chr19:12885483 | chr19:13135835 | ENST00000264827 | - | 3 | 22 | 180_427 | 68.0 | 718.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | HOOK2 | chr19:12885483 | chr19:13135835 | ENST00000264827 | - | 3 | 22 | 455_607 | 68.0 | 718.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | HOOK2 | chr19:12885483 | chr19:13135835 | ENST00000397668 | - | 3 | 23 | 180_427 | 68.0 | 720.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | HOOK2 | chr19:12885483 | chr19:13135835 | ENST00000397668 | - | 3 | 23 | 455_607 | 68.0 | 720.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | HOOK2 | chr19:12885483 | chr19:13135835 | ENST00000264827 | - | 3 | 22 | 6_122 | 68.0 | 718.0 | Domain | Calponin-homology (CH) |
Hgene | HOOK2 | chr19:12885483 | chr19:13135835 | ENST00000397668 | - | 3 | 23 | 6_122 | 68.0 | 720.0 | Domain | Calponin-homology (CH) |
Hgene | HOOK2 | chr19:12885483 | chr19:13135835 | ENST00000264827 | - | 3 | 22 | 1_161 | 68.0 | 718.0 | Region | Note=Required for localization to the centrosome and induction of aggresome formation |
Hgene | HOOK2 | chr19:12885483 | chr19:13135835 | ENST00000264827 | - | 3 | 22 | 533_719 | 68.0 | 718.0 | Region | Note=Required for localization to the centrosome and induction of aggresome formation |
Hgene | HOOK2 | chr19:12885483 | chr19:13135835 | ENST00000397668 | - | 3 | 23 | 1_161 | 68.0 | 720.0 | Region | Note=Required for localization to the centrosome and induction of aggresome formation |
Hgene | HOOK2 | chr19:12885483 | chr19:13135835 | ENST00000397668 | - | 3 | 23 | 533_719 | 68.0 | 720.0 | Region | Note=Required for localization to the centrosome and induction of aggresome formation |
Tgene | NFIX | chr19:12885483 | chr19:13135835 | ENST00000397661 | 0 | 10 | 1_194 | 9.0 | 878.6666666666666 | DNA binding | CTF/NF-I | |
Tgene | NFIX | chr19:12885483 | chr19:13135835 | ENST00000592199 | 0 | 11 | 1_194 | 9.0 | 503.0 | DNA binding | CTF/NF-I |
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Fusion Gene Sequence for HOOK2-NFIX |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000397668_ENST00000397661_TCGA-S3-AA0Z-01A_HOOK2_chr19_12885483_-_NFIX_chr19_13135835_length(transcript)=3164nt_BP=278nt GCTCGCTGGTGGCGGACCCGGAGGCTGCTGCGGCGCCGGGGCTCCGTGGCCTGGATTGAATCCGATCGGGAGCCATGAGCGTGGACAAAG CTGAGCTATGCGGGTCTCTGCTCACCTGGTTACAGACGTTCCACGTTCCGTCTCCCTGTGCCAGCCCTCAGGACCTGAGCAGCGGCCTTG CCGTAGCCTATGTGCTGAACCAGATAGACCCCTCCTGGTTCAACGAGGCATGGCTCCAGGGCATCTCGGAAGATCCAGGTCCCAACTGGA AGCTGAAGGATGAGTTCCACCCGTTCATCGAGGCACTGCTGCCTCACGTCCGCGCTTTCTCCTACACCTGGTTCAACCTGCAGGCGCGGA AGCGCAAGTACTTCAAGAAGCATGAAAAGCGGATGTCGAAGGACGAGGAGCGGGCGGTGAAGGACGAGCTGCTGGGCGAGAAGCCCGAGA TCAAGCAGAAGTGGGCATCCCGGCTGCTGGCCAAGCTGCGCAAGGACATCCGGCCCGAGTTCCGCGAGGACTTCGTGCTGACCATCACGG GCAAGAAGCCCCCCTGCTGCGTGCTCTCCAACCCCGACCAGAAGGGCAAGATCCGGCGGATTGACTGCCTGCGCCAGGCTGACAAGGTGT GGCGGCTGGACCTGGTCATGGTGATTTTGTTTAAGGGGATCCCCCTGGAAAGTACTGATGGGGAGCGGCTCTACAAGTCGCCTCAGTGCT CGAACCCCGGCCTGTGCGTCCAGCCACATCACATTGGAGTCACAATCAAAGAACTGGATCTTTATCTGGCTTACTTTGTCCACACTCCGG AATCCGGACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGACATCAAACCACTGCCCAACGGGCACTTAAGTTTCCAGGACTGTTTTG TGACTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAGAGTATCACAGACTCCTGTTGCAACAGCATCAGGGCCCAACTTCTCCCTGGCGG ACCTGGAGAGTCCCAGCTACTACAACATCAACCAGGTGACCCTGGGGCGGCGGTCCATCACCTCCCCTCCTTCCACCAGCACCACCAAGC GCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGTTGATGACGTGTTCTATCCCGGGACAGGCCGTTCCCCAGCAGCTGGCAGCA GCCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAGGCCCGGCTTCTCTAAAGAAGTCAGGAAAGCTGGACTTCTGCAGTGCCCTCTCCT CTCAGGGCAGCTCCCCGCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGGAGCCCCCGGGCCACAGCAT CAGCCCTGCACTTCCCCTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTTCACGCACCCGACCATCCGCTACCACCACCACCACGGGC AGGACTCACTGAAGGAGTTTGTGCAGTTTGTGTGCTCGGATGGCTCGGGCCAGGCCACCGGACAGCATTCGCAACGACAGGCGCCTCCTC TGCCAACCGGTTTGTCAGCATCGGACCCCGGGACGGCAACTTTCTGAACATCCCACAGCAGTCTCAGTCCTGGTTCCTCTGATAAGATCG ACAAAAGAAACAACAAAATGAGAAGAAGAGGTTCCTCGAAAGGGGGGAGAAGAAATTTTGAGAATGGAAAAATCCCCCAGCCCAGCCCAG CCCCACCGAAAAGCAAAAATTACACGTCGTCAGCCACTCAGCCCTTCTCTCCTCCAGCCCGGGGACCCCCGCGGGCCCCAGAAGCAGCCC AGTTCTCAGAGAGCCCTTGGAAGGGGTCTCGGTGGAGCTGTGCACCAGCAGCCAAGCAGAAAGAAACACGCGACATGGACTCTGTCAAGT AGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGACCCCGCCCCGGCCTTCTGGGGAAGGAACAAAGTCCCCAAACA AAGCAACCAGCACAATTCTGAAGGGGCCTGGCCTCCACCCTCACCCCTTCCTAGGGGAACCCCACCCTCCACACAGCCGGAGCTGCCCTA GGGAGCCTGGAGGGCCAGCTTGTAAAGATGATGGGGTTTAGATCCCTCAGGCTCTCCCCTCCAGACTCCGCCCTTCCCTCCCTCCCTCCC TCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTCCCCCAGCTGCTCCCGACCAGGAGGGGGAGAGCAGCCTCCACTTACCCCACCCCACCC TTGGGCTAAAAGCCCCCAGGCGGGCAGGGGGTGACCCCTGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTCTGACACCCCACCCTGA GCCGCAAGAGCAGTCCTGGGGCCCTGGACCCCTCTGTACAGTCCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGG ACAGGCCCCCTTTCCCCTCTCTCTGCAGGCCAGGAGGGCCTCCTTCCTGCCACGAGGGAGGGGAGTCGGGCCCCAGGTCGCCCCCGCCCC CAGCCCTGCATGCAGGTGCCCTCGCTCCGCCCCATCAGTTCCTGCCCCTGCCCCTCATGCAGACTGCCCTGCTGGGGCCGGGCCGGAGGG TGGAGCAGAAAGGGGACCCCGGAGCCGAGCGAGGAGGACCAGGCAGCCGCCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAGGCGT CCTGCTCGCCGACTTTCAGTTCCTTGGGAGGGTGTTGGGTGTCGTCCTTTTCAAAAGTGTTTTGGAGCTTTCTGTGCCCCCCGACTTTCC CCCGCCTCCCCGCCCCCCACGTGGCCACTTTTCTCTGGATTTTAGCTGTAATGTCTTTACTCTTTATTTAGGGGTGGGGCATTCATTGTT TGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACTTGGGAACAATTTGGTAACACACCACAGGAAGTAGCTCTCCCC CCCAGCCCCCTCCTCCCTCAAGGGAGGGTTGGGGGGCCTGTCCAGAGGGTCTTCAGAAGCCCCCCTGGGAGGGAGGGGAGGATGAGCACG CCCAGCTCCCCTCCAGGGTGTGACTTGGCCCCTCTGGCTTGTCTTTCTGTGCCTTACTCCTCCTCCTGCGTCTCCCGTTCCTGGCCCCTT >In-frame_ENST00000397668_ENST00000397661_TCGA-S3-AA0Z-01A_HOOK2_chr19_12885483_-_NFIX_chr19_13135835_length(amino acids)=500AA_start in transcript=74_stop in transcript=1576 MSVDKAELCGSLLTWLQTFHVPSPCASPQDLSSGLAVAYVLNQIDPSWFNEAWLQGISEDPGPNWKLKDEFHPFIEALLPHVRAFSYTWF NLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLR QADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDSSNQQGDADIKPLPNGHLS FQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGRS PAAGSSQSSGWPNDVDAGPASLKKSGKLDFCSALSSQGSSPRMAFTHHPLPVLAGVRPGSPRATASALHFPSTSIIQQSSPYFTHPTIRY -------------------------------------------------------------- >In-frame_ENST00000397668_ENST00000592199_TCGA-S3-AA0Z-01A_HOOK2_chr19_12885483_-_NFIX_chr19_13135835_length(transcript)=1760nt_BP=278nt GCTCGCTGGTGGCGGACCCGGAGGCTGCTGCGGCGCCGGGGCTCCGTGGCCTGGATTGAATCCGATCGGGAGCCATGAGCGTGGACAAAG CTGAGCTATGCGGGTCTCTGCTCACCTGGTTACAGACGTTCCACGTTCCGTCTCCCTGTGCCAGCCCTCAGGACCTGAGCAGCGGCCTTG CCGTAGCCTATGTGCTGAACCAGATAGACCCCTCCTGGTTCAACGAGGCATGGCTCCAGGGCATCTCGGAAGATCCAGGTCCCAACTGGA AGCTGAAGGATGAGTTCCACCCGTTCATCGAGGCACTGCTGCCTCACGTCCGCGCTTTCTCCTACACCTGGTTCAACCTGCAGGCGCGGA AGCGCAAGTACTTCAAGAAGCATGAAAAGCGGATGTCGAAGGACGAGGAGCGGGCGGTGAAGGACGAGCTGCTGGGCGAGAAGCCCGAGA TCAAGCAGAAGTGGGCATCCCGGCTGCTGGCCAAGCTGCGCAAGGACATCCGGCCCGAGTTCCGCGAGGACTTCGTGCTGACCATCACGG GCAAGAAGCCCCCCTGCTGCGTGCTCTCCAACCCCGACCAGAAGGGCAAGATCCGGCGGATTGACTGCCTGCGCCAGGCTGACAAGGTGT GGCGGCTGGACCTGGTCATGGTGATTTTGTTTAAGGGGATCCCCCTGGAAAGTACTGATGGGGAGCGGCTCTACAAGTCGCCTCAGTGCT CGAACCCCGGCCTGTGCGTCCAGCCACATCACATTGGAGTCACAATCAAAGAACTGGATCTTTATCTGGCTTACTTTGTCCACACTCCGG AATCCGGACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGACATCAAACCACTGCCCAACGGGCACTTAAGTTTCCAGGACTGTTTTG TGACTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAGAGTATCACAGACTCCTGTTGCAACAGCATCAGGGCCCAACTTCTCCCTGGCGG ACCTGGAGAGTCCCAGCTACTACAACATCAACCAGGTGACCCTGGGGCGGCGGTCCATCACCTCCCCTCCTTCCACCAGCACCACCAAGC GCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGTTGATGACGTGTTCTATCCCGGGACAGGCCGTTCCCCAGCAGCTGGCAGCA GCCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAGGCCCGGCTTCTCTAAAGAAGTCAGGAAAGCTGGACTTCTGCAGTGCCCTCTCCT CTCAGGGCAGCTCCCCGCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGGAGCCCCCGGGCCACAGCAT CAGCCCTGCACTTCCCCTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTTCACGCACCCGACCATCCGCTACCACCACCACCACGGGC AGGACTCACTGAAGGAGTTTGTGCAGTTTGTGTGCTCGGATGGCTCGGGCCAGGCCACCGGACAGCCCAACGGTAGCGGCCAGGGCAAAG TCCCGGGGTCATTTTTGCTACCGCCGCCGCCTCCAGTGGCCAGACCTGTGCCCCTTCCTATGCCTGATTCCAAATCCACCAGCACTGCCC CAGACGGCGCCGCCTTGACTCCTCCATCACCTTCATTCGCAACGACAGGCGCCTCCTCTGCCAACCGGTTTGTCAGCATCGGACCCCGGG >In-frame_ENST00000397668_ENST00000592199_TCGA-S3-AA0Z-01A_HOOK2_chr19_12885483_-_NFIX_chr19_13135835_length(amino acids)=562AA_start in transcript=74_stop in transcript=1759 MSVDKAELCGSLLTWLQTFHVPSPCASPQDLSSGLAVAYVLNQIDPSWFNEAWLQGISEDPGPNWKLKDEFHPFIEALLPHVRAFSYTWF NLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLR QADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDSSNQQGDADIKPLPNGHLS FQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGRS PAAGSSQSSGWPNDVDAGPASLKKSGKLDFCSALSSQGSSPRMAFTHHPLPVLAGVRPGSPRATASALHFPSTSIIQQSSPYFTHPTIRY HHHHGQDSLKEFVQFVCSDGSGQATGQPNGSGQGKVPGSFLLPPPPPVARPVPLPMPDSKSTSTAPDGAALTPPSPSFATTGASSANRFV -------------------------------------------------------------- >In-frame_ENST00000397668_ENST00000587760_TCGA-S3-AA0Z-01A_HOOK2_chr19_12885483_-_NFIX_chr19_13135835_length(transcript)=1721nt_BP=278nt GCTCGCTGGTGGCGGACCCGGAGGCTGCTGCGGCGCCGGGGCTCCGTGGCCTGGATTGAATCCGATCGGGAGCCATGAGCGTGGACAAAG CTGAGCTATGCGGGTCTCTGCTCACCTGGTTACAGACGTTCCACGTTCCGTCTCCCTGTGCCAGCCCTCAGGACCTGAGCAGCGGCCTTG CCGTAGCCTATGTGCTGAACCAGATAGACCCCTCCTGGTTCAACGAGGCATGGCTCCAGGGCATCTCGGAAGATCCAGGTCCCAACTGGA AGCTGAAGGATGAGTTCCACCCGTTCATCGAGGCACTGCTGCCTCACGTCCGCGCTTTCTCCTACACCTGGTTCAACCTGCAGGCGCGGA AGCGCAAGTACTTCAAGAAGCATGAAAAGCGGATGTCGAAGGACGAGGAGCGGGCGGTGAAGGACGAGCTGCTGGGCGAGAAGCCCGAGA TCAAGCAGAAGTGGGCATCCCGGCTGCTGGCCAAGCTGCGCAAGGACATCCGGCCCGAGTTCCGCGAGGACTTCGTGCTGACCATCACGG GCAAGAAGCCCCCCTGCTGCGTGCTCTCCAACCCCGACCAGAAGGGCAAGATCCGGCGGATTGACTGCCTGCGCCAGGCTGACAAGGTGT GGCGGCTGGACCTGGTCATGGTGATTTTGTTTAAGGGGATCCCCCTGGAAAGTACTGATGGGGAGCGGCTCTACAAGTCGCCTCAGTGCT CGAACCCCGGCCTGTGCGTCCAGCCACATCACATTGGAGTCACAATCAAAGAACTGGATCTTTATCTGGCTTACTTTGTCCACACTCCGG AATCCGGACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGACATCAAACCACTGCCCAACGGGCACTTAAGTTTCCAGGACTGTTTTG TGACTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAGAGTATCACAGACTCCTGTTGCAACAGCATCAGGGCCCAACTTCTCCCTGGCGG ACCTGGAGAGTCCCAGCTACTACAACATCAACCAGGTGACCCTGGGGCGGCGGTCCATCACCTCCCCTCCTTCCACCAGCACCACCAAGC GCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGTTGATGACGTGTTCTATCCCGGGACAGGCCGTTCCCCAGCAGCTGGCAGCA GCCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAGGCCCGGCTTCTCTAAAGAAGTCAGGAAAGCTGGACTTCTGCAGTGCCCTCTCCT CTCAGGGCAGCTCCCCGCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGGAGCCCCCGGGCCACAGCAT CAGCCCTGCACTTCCCCTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTTCACGCACCCGACCATCCGCTACCACCACCACCACGGGC AGGACTCACTGAAGGAGTTTGTGCAGTTTGTGTGCTCGGATGGCTCGGGCCAGGCCACCGGACAGCATTCGCAACGACAGGCGCCTCCTC TGCCAACCGGTTTGTCAGCATCGGACCCCGGGACGGCAACTTTCTGAACATCCCACAGCAGTCTCAGTCCTGGTTCCTCTGATAAGATCG ACAAAAGAAACAACAAAATGAGAAGAAGAGGTTCCTCGAAAGGGGGGAGAAGAAATTTTGAGAATGGAAAAATCCCCCAGCCCAGCCCAG >In-frame_ENST00000397668_ENST00000587760_TCGA-S3-AA0Z-01A_HOOK2_chr19_12885483_-_NFIX_chr19_13135835_length(amino acids)=500AA_start in transcript=74_stop in transcript=1576 MSVDKAELCGSLLTWLQTFHVPSPCASPQDLSSGLAVAYVLNQIDPSWFNEAWLQGISEDPGPNWKLKDEFHPFIEALLPHVRAFSYTWF NLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLR QADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDSSNQQGDADIKPLPNGHLS FQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGRS PAAGSSQSSGWPNDVDAGPASLKKSGKLDFCSALSSQGSSPRMAFTHHPLPVLAGVRPGSPRATASALHFPSTSIIQQSSPYFTHPTIRY -------------------------------------------------------------- >In-frame_ENST00000397668_ENST00000585575_TCGA-S3-AA0Z-01A_HOOK2_chr19_12885483_-_NFIX_chr19_13135835_length(transcript)=1760nt_BP=278nt GCTCGCTGGTGGCGGACCCGGAGGCTGCTGCGGCGCCGGGGCTCCGTGGCCTGGATTGAATCCGATCGGGAGCCATGAGCGTGGACAAAG CTGAGCTATGCGGGTCTCTGCTCACCTGGTTACAGACGTTCCACGTTCCGTCTCCCTGTGCCAGCCCTCAGGACCTGAGCAGCGGCCTTG CCGTAGCCTATGTGCTGAACCAGATAGACCCCTCCTGGTTCAACGAGGCATGGCTCCAGGGCATCTCGGAAGATCCAGGTCCCAACTGGA AGCTGAAGGATGAGTTCCACCCGTTCATCGAGGCACTGCTGCCTCACGTCCGCGCTTTCTCCTACACCTGGTTCAACCTGCAGGCGCGGA AGCGCAAGTACTTCAAGAAGCATGAAAAGCGGATGTCGAAGGACGAGGAGCGGGCGGTGAAGGACGAGCTGCTGGGCGAGAAGCCCGAGA TCAAGCAGAAGTGGGCATCCCGGCTGCTGGCCAAGCTGCGCAAGGACATCCGGCCCGAGTTCCGCGAGGACTTCGTGCTGACCATCACGG GCAAGAAGCCCCCCTGCTGCGTGCTCTCCAACCCCGACCAGAAGGGCAAGATCCGGCGGATTGACTGCCTGCGCCAGGCTGACAAGGTGT GGCGGCTGGACCTGGTCATGGTGATTTTGTTTAAGGGGATCCCCCTGGAAAGTACTGATGGGGAGCGGCTCTACAAGTCGCCTCAGTGCT CGAACCCCGGCCTGTGCGTCCAGCCACATCACATTGGAGTCACAATCAAAGAACTGGATCTTTATCTGGCTTACTTTGTCCACACTCCGG AATCCGGACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGACATCAAACCACTGCCCAACGGGCACTTAAGTTTCCAGGACTGTTTTG TGACTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAGAGTATCACAGACTCCTGTTGCAACAGCATCAGGGCCCAACTTCTCCCTGGCGG ACCTGGAGAGTCCCAGCTACTACAACATCAACCAGGTGACCCTGGGGCGGCGGTCCATCACCTCCCCTCCTTCCACCAGCACCACCAAGC GCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGTTGATGACGTGTTCTATCCCGGGACAGGCCGTTCCCCAGCAGCTGGCAGCA GCCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAGGCCCGGCTTCTCTAAAGAAGTCAGGAAAGCTGGACTTCTGCAGTGCCCTCTCCT CTCAGGGCAGCTCCCCGCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGGAGCCCCCGGGCCACAGCAT CAGCCCTGCACTTCCCCTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTTCACGCACCCGACCATCCGCTACCACCACCACCACGGGC AGGACTCACTGAAGGAGTTTGTGCAGTTTGTGTGCTCGGATGGCTCGGGCCAGGCCACCGGACAGCCCAACGGTAGCGGCCAGGGCAAAG TCCCGGGGTCATTTTTGCTACCGCCGCCGCCTCCAGTGGCCAGACCTGTGCCCCTTCCTATGCCTGATTCCAAATCCACCAGCACTGCCC CAGACGGCGCCGCCTTGACTCCTCCATCACCTTCATTCGCAACGACAGGCGCCTCCTCTGCCAACCGGTTTGTCAGCATCGGACCCCGGG >In-frame_ENST00000397668_ENST00000585575_TCGA-S3-AA0Z-01A_HOOK2_chr19_12885483_-_NFIX_chr19_13135835_length(amino acids)=562AA_start in transcript=74_stop in transcript=1759 MSVDKAELCGSLLTWLQTFHVPSPCASPQDLSSGLAVAYVLNQIDPSWFNEAWLQGISEDPGPNWKLKDEFHPFIEALLPHVRAFSYTWF NLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLR QADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDSSNQQGDADIKPLPNGHLS FQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGRS PAAGSSQSSGWPNDVDAGPASLKKSGKLDFCSALSSQGSSPRMAFTHHPLPVLAGVRPGSPRATASALHFPSTSIIQQSSPYFTHPTIRY HHHHGQDSLKEFVQFVCSDGSGQATGQPNGSGQGKVPGSFLLPPPPPVARPVPLPMPDSKSTSTAPDGAALTPPSPSFATTGASSANRFV -------------------------------------------------------------- >In-frame_ENST00000397668_ENST00000360105_TCGA-S3-AA0Z-01A_HOOK2_chr19_12885483_-_NFIX_chr19_13135835_length(transcript)=5636nt_BP=278nt GCTCGCTGGTGGCGGACCCGGAGGCTGCTGCGGCGCCGGGGCTCCGTGGCCTGGATTGAATCCGATCGGGAGCCATGAGCGTGGACAAAG CTGAGCTATGCGGGTCTCTGCTCACCTGGTTACAGACGTTCCACGTTCCGTCTCCCTGTGCCAGCCCTCAGGACCTGAGCAGCGGCCTTG CCGTAGCCTATGTGCTGAACCAGATAGACCCCTCCTGGTTCAACGAGGCATGGCTCCAGGGCATCTCGGAAGATCCAGGTCCCAACTGGA AGCTGAAGGATGAGTTCCACCCGTTCATCGAGGCACTGCTGCCTCACGTCCGCGCTTTCTCCTACACCTGGTTCAACCTGCAGGCGCGGA AGCGCAAGTACTTCAAGAAGCATGAAAAGCGGATGTCGAAGGACGAGGAGCGGGCGGTGAAGGACGAGCTGCTGGGCGAGAAGCCCGAGA TCAAGCAGAAGTGGGCATCCCGGCTGCTGGCCAAGCTGCGCAAGGACATCCGGCCCGAGTTCCGCGAGGACTTCGTGCTGACCATCACGG GCAAGAAGCCCCCCTGCTGCGTGCTCTCCAACCCCGACCAGAAGGGCAAGATCCGGCGGATTGACTGCCTGCGCCAGGCTGACAAGGTGT GGCGGCTGGACCTGGTCATGGTGATTTTGTTTAAGGGGATCCCCCTGGAAAGTACTGATGGGGAGCGGCTCTACAAGTCGCCTCAGTGCT CGAACCCCGGCCTGTGCGTCCAGCCACATCACATTGGAGTCACAATCAAAGAACTGGATCTTTATCTGGCTTACTTTGTCCACACTCCGG AATCCGGACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGACATCAAACCACTGCCCAACGGGCACTTAAGTTTCCAGGACTGTTTTG TGACTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAGAGTATCACAGACTCCTGTTGCAACAGCATCAGGGCCCAACTTCTCCCTGGCGG ACCTGGAGAGTCCCAGCTACTACAACATCAACCAGGTGACCCTGGGGCGGCGGTCCATCACCTCCCCTCCTTCCACCAGCACCACCAAGC GCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGTTGATGACGTGTTCTATCCCGGGACAGGCCGTTCCCCAGCAGCTGGCAGCA GCCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAGGGAGCCCCCGGGCCACAGCATCAGCCCTGCACTTCCCCTCCACGTCCATCATCC AGCAGTCGAGCCCGTATTTCACGCACCCGACCATCCGCTACCACCACCACCACGGGCAGGACTCACTGAAGGAGTTTGTGCAGTTTGTGT GCTCGGATGGCTCGGGCCAGGCCACCGGACAGCATTCGCAACGACAGGCGCCTCCTCTGCCAACCGGTTTGTCAGCATCGGACCCCGGGA CGGCAACTTTCTGAACATCCCACAGCAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAGAAGAGGTT CCTCGAAAGGGGGGAGAAGAAATTTTGAGAATGGAAAAATCCCCCAGCCCAGCCCAGCCCCACCGAAAAGCAAAAATTACACGTCGTCAG CCACTCAGCCCTTCTCTCCTCCAGCCCGGGGACCCCCGCGGGCCCCAGAAGCAGCCCAGTTCTCAGAGAGCCCTTGGAAGGGGTCTCGGT GGAGCTGTGCACCAGCAGCCAAGCAGAAAGAAACACGCGACATGGACTCTGTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTG CCTTCCTCCCCCTGACCCCGCCCCGGCCTTCTGGGGAAGGAACAAAGTCCCCAAACAAAGCAACCAGCACAATTCTGAAGGGGCCTGGCC TCCACCCTCACCCCTTCCTAGGGGAACCCCACCCTCCACACAGCCGGAGCTGCCCTAGGGAGCCTGGAGGGCCAGCTTGTAAAGATGATG GGGTTTAGATCCCTCAGGCTCTCCCCTCCAGACTCCGCCCTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTC CCCCAGCTGCTCCCGACCAGGAGGGGGAGAGCAGCCTCCACTTACCCCACCCCACCCTTGGGCTAAAAGCCCCCAGGCGGGCAGGGGGTG ACCCCTGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTCTGACACCCCACCCTGAGCCGCAAGAGCAGTCCTGGGGCCCTGGACCCCT CTGTACAGTCCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGCCCCCTTTCCCCTCTCTCTGCAGGCCAG GAGGGCCTCCTTCCTGCCACGAGGGAGGGGAGTCGGGCCCCAGGTCGCCCCCGCCCCCAGCCCTGCATGCAGGTGCCCTCGCTCCGCCCC ATCAGTTCCTGCCCCTGCCCCTCATGCAGACTGCCCTGCTGGGGCCGGGCCGGAGGGTGGAGCAGAAAGGGGACCCCGGAGCCGAGCGAG GAGGACCAGGCAGCCGCCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGACTTTCAGTTCCTTGGGAGGGT GTTGGGTGTCGTCCTTTTCAAAAGTGTTTTGGAGCTTTCTGTGCCCCCCGACTTTCCCCCGCCTCCCCGCCCCCCACGTGGCCACTTTTC TCTGGATTTTAGCTGTAATGTCTTTACTCTTTATTTAGGGGTGGGGCATTCATTGTTTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCC TCCATTTGAGCAACTTGGGAACAATTTGGTAACACACCACAGGAAGTAGCTCTCCCCCCCAGCCCCCTCCTCCCTCAAGGGAGGGTTGGG GGGCCTGTCCAGAGGGTCTTCAGAAGCCCCCCTGGGAGGGAGGGGAGGATGAGCACGCCCAGCTCCCCTCCAGGGTGTGACTTGGCCCCT CTGGCTTGTCTTTCTGTGCCTTACTCCTCCTCCTGCGTCTCCCGTTCCTGGCCCCTTCTTGAGTCCTTGTGCCTCTCTCTTTCTCTCTCT TTCTTAATTGTATGAAAACACAAAGCACAGGTCAGGATCCTCTGAGAGAAAATCAACATTGCACCACGTAGGGGTGGGCTATGGGCTGTA TTTATTGTGAATCTAGTTTGTGAGGCTGTGGCCCCGAGCTGGCGGAGGGAGGGAAGAGGAGGGAGTGACGGGAGGGGAGGAGGTCAGCGA CCTGGGGCCGTAGCGGCAGGCGAACGGTGCCTGCTACCCAGCTGGAAGCCACAAGGTGGCTGGCTCCAGGGGCGGCTTTTGTTGGAAGTT GAGTGAAGCCCTCCCCCTGTCCTCAGCGTGCAGCCCTAGAGGACCCCAGGGCTGAGGGGCAGTGGATCCTGCGGGAGTCTCCCGGGGCGT GGGGAGTAAGGCCCCGGGGGTGGGGGGCCGGGTGGGCCGGGCGTGACGCGCGGTCAAAGTGCAATGATTTTTCAGTTCGGTTGGCTAAAC AGGGTCAGAGCTGAGAGCGAAGCAGAAGGGGCTCCCTGTCCGGCCCACGTGCCCTTTCCCTCGACGACAGTCGAGGGCTCGGGCTCTGTG GGACTGTGGGAGCTAGGGTCTGCGGGGCGCCTGCCCGGGCGAGGTCGGAAGCTGCAGGCCAGCTGGGCCCGGGCCGGAGCGTGCCCGGCG GGGCTGCCCGGGCGGGCAGGGGGTGGGGGCTGCTCCTTTCCCAAGTGGTGTTGTGAGGGGCAATGAGGGCAACAGGAGATGTGGGGACGT GTTAGGAGAGAAAAAAAAAAAAACAAAAATATATATGGGGGAAATTAACTTTTTTTTTTCATTGAACCAAGTGCAATGCATCAGAGAGTT TTCCTATCTTTGTATGTTAAGAGATTAAGAAAAAAAAATTCTATTTTTGTTGTAATGTCCTCGCGGCTCTGGGGACGCTAAAAGAACCGG GCCTGCCCCGCCCTGCGCGGGGATAACGAAAGCTGAGTGTTTTTCCCTTTTTTTTGTTCGTTTTTAGTTTTTTTTTTTTTAAGTCGTTTT CCTGCGTTGACGAGGATGATCTGGGGTTTTTATTTGTTTCGTCGTTCGTTCTGTTTCGGTGGGAGGGCTGAAGGAAACGTTCACATTTTA GAGTTTAAAAAAAACACCTCGACATTTAAAAAATCAACCAACACAAGATCAAAAAGGAAAAGGACGAGAGAAAAATTATTTTTAAGATAA TTAAACATAAAACCCTGGTGCTTCTTACATTATAAAGTACGTTTTAAAGAACCCACAAACTATTATACATAAGTTTATGAATCAATTAAA TATCCTGCACTTGTTAGGAATACGCATATCCCTTCTTTGTTGAGTTTAACGGAACGGGACAGCGGCGTGCCCCCGGCGGCTGGACTGCTC CGGCCGCGGGTCTCCCCGGGCGCCCCTCCCTGGGGCCCAGCACCCCTCCTCGCCCCATCCCCGTCCGGGTACGGGGGCGCGGCAGGGGTC CCCGGCCCCTCCCCCGCAGAGGTCAATGCCAACGAACAAACGTCCCCTCCCTCCCTCCCTCTCCGCCCCGAGCGCCCTTCTTTGAGCCAG ACGCCAACTTGACCCTCACCAGCATTATCAGGAGCGCGCTCAGCAAGTTGGTAGTTTCCTCCCCCCTTTCCCGGCGCCCCTCCCGCCCCC ATTCAACATCTCTCATCCTATCCCCGACCCCCTCCGGGGAACACCGGGAAGGCTCGACGCTCCAGGACAGGACCAGCCACGCAGACAGGT CGATTTGCCCAGGCCCGCGCCCGCACGCACGCACGCACACGGCCCCGCACACAGCCCCGCCCCACCCCGCAACCAGCCCTGTCGACTGCC TTATACACCCGCCCCCGCGCTGGCCGGCCGACCTAGTGCCTTGTTCTCACCCCCGTGCTGGCGGAGCGGACGCCGCGCTCTGGGTCCCAG AGGGGCCGGGTGGCTCAGACGACCCACCACTCCCCCACCCTGACCGTGCTGAACAGACCCCCCCACACGAGAGAAAATAAAGGAGCAATA AAGTCACGAGAACTTTCGTCCCCCAATCGAGAGCCCGAGGGGCACCCCAGCCCCGCCTCTGCTCCCCCCCACCCCACCCACCCTCGGGGC GCCCCCCTCCCCCCGCAAGCCAGCCTGGGCCAGCCCCGCTTCGGCCCCTCCCGGGAGATCCGTGCGCCCGACCAGCACCAGCATCGCGGA CCGCAAAGGCCGCCCGTCCCGTCAAACAAGTTTCTTCTTAGGCTAAGAAACGCAGTATATACGAGTATCTCTATATATAGTACTAATGGA TTTGGTGTGCTTCCCCCTTAGCGTCCCCCTCCCTCTGCTCCTCCTCCTTCAGCCTGGTCTCCCCCTCTTCTCTGCCCTCCACCCCCGTCT CTGCACTGAGATACATAAGAAACAAGGGTAGTTTACTGTCTGTTTTGTTTTCTGGGTTTTCAGTGTCCTAGCGGAATGCAAGTAGGCAGC CAGCCCGTCTGTTCCCTCTCCGCCCCGCCCCGCCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTCCGGCTTC >In-frame_ENST00000397668_ENST00000360105_TCGA-S3-AA0Z-01A_HOOK2_chr19_12885483_-_NFIX_chr19_13135835_length(amino acids)=459AA_start in transcript=74_stop in transcript=1453 MSVDKAELCGSLLTWLQTFHVPSPCASPQDLSSGLAVAYVLNQIDPSWFNEAWLQGISEDPGPNWKLKDEFHPFIEALLPHVRAFSYTWF NLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLR QADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDSSNQQGDADIKPLPNGHLS FQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGRS PAAGSSQSSGWPNDVDAGSPRATASALHFPSTSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQFVCSDGSGQATGQHSQRQAPPLPTGLS -------------------------------------------------------------- >In-frame_ENST00000264827_ENST00000397661_TCGA-S3-AA0Z-01A_HOOK2_chr19_12885483_-_NFIX_chr19_13135835_length(transcript)=3261nt_BP=375nt GAGGCGGAGCCTGGGCTTGGGGGCGGGGCGGGGCCTGCGCCTAGGGGGGCGGGGCGGGGCGGCGCTCTAGGCCGAGCGGGAGGTCGGGGC TGCGGGCGCTCGCTGGTGGCGGACCCGGAGGCTGCTGCGGCGCCGGGGCTCCGTGGCCTGGATTGAATCCGATCGGGAGCCATGAGCGTG GACAAAGCTGAGCTATGCGGGTCTCTGCTCACCTGGTTACAGACGTTCCACGTTCCGTCTCCCTGTGCCAGCCCTCAGGACCTGAGCAGC GGCCTTGCCGTAGCCTATGTGCTGAACCAGATAGACCCCTCCTGGTTCAACGAGGCATGGCTCCAGGGCATCTCGGAAGATCCAGGTCCC AACTGGAAGCTGAAGGATGAGTTCCACCCGTTCATCGAGGCACTGCTGCCTCACGTCCGCGCTTTCTCCTACACCTGGTTCAACCTGCAG GCGCGGAAGCGCAAGTACTTCAAGAAGCATGAAAAGCGGATGTCGAAGGACGAGGAGCGGGCGGTGAAGGACGAGCTGCTGGGCGAGAAG CCCGAGATCAAGCAGAAGTGGGCATCCCGGCTGCTGGCCAAGCTGCGCAAGGACATCCGGCCCGAGTTCCGCGAGGACTTCGTGCTGACC ATCACGGGCAAGAAGCCCCCCTGCTGCGTGCTCTCCAACCCCGACCAGAAGGGCAAGATCCGGCGGATTGACTGCCTGCGCCAGGCTGAC AAGGTGTGGCGGCTGGACCTGGTCATGGTGATTTTGTTTAAGGGGATCCCCCTGGAAAGTACTGATGGGGAGCGGCTCTACAAGTCGCCT CAGTGCTCGAACCCCGGCCTGTGCGTCCAGCCACATCACATTGGAGTCACAATCAAAGAACTGGATCTTTATCTGGCTTACTTTGTCCAC ACTCCGGAATCCGGACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGACATCAAACCACTGCCCAACGGGCACTTAAGTTTCCAGGAC TGTTTTGTGACTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAGAGTATCACAGACTCCTGTTGCAACAGCATCAGGGCCCAACTTCTCC CTGGCGGACCTGGAGAGTCCCAGCTACTACAACATCAACCAGGTGACCCTGGGGCGGCGGTCCATCACCTCCCCTCCTTCCACCAGCACC ACCAAGCGCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGTTGATGACGTGTTCTATCCCGGGACAGGCCGTTCCCCAGCAGCT GGCAGCAGCCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAGGCCCGGCTTCTCTAAAGAAGTCAGGAAAGCTGGACTTCTGCAGTGCC CTCTCCTCTCAGGGCAGCTCCCCGCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGGAGCCCCCGGGCC ACAGCATCAGCCCTGCACTTCCCCTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTTCACGCACCCGACCATCCGCTACCACCACCAC CACGGGCAGGACTCACTGAAGGAGTTTGTGCAGTTTGTGTGCTCGGATGGCTCGGGCCAGGCCACCGGACAGCATTCGCAACGACAGGCG CCTCCTCTGCCAACCGGTTTGTCAGCATCGGACCCCGGGACGGCAACTTTCTGAACATCCCACAGCAGTCTCAGTCCTGGTTCCTCTGAT AAGATCGACAAAAGAAACAACAAAATGAGAAGAAGAGGTTCCTCGAAAGGGGGGAGAAGAAATTTTGAGAATGGAAAAATCCCCCAGCCC AGCCCAGCCCCACCGAAAAGCAAAAATTACACGTCGTCAGCCACTCAGCCCTTCTCTCCTCCAGCCCGGGGACCCCCGCGGGCCCCAGAA GCAGCCCAGTTCTCAGAGAGCCCTTGGAAGGGGTCTCGGTGGAGCTGTGCACCAGCAGCCAAGCAGAAAGAAACACGCGACATGGACTCT GTCAAGTAGAGGACAGAAAGCAAGAAAGGATGCAGAACTGCCTTCCTCCCCCTGACCCCGCCCCGGCCTTCTGGGGAAGGAACAAAGTCC CCAAACAAAGCAACCAGCACAATTCTGAAGGGGCCTGGCCTCCACCCTCACCCCTTCCTAGGGGAACCCCACCCTCCACACAGCCGGAGC TGCCCTAGGGAGCCTGGAGGGCCAGCTTGTAAAGATGATGGGGTTTAGATCCCTCAGGCTCTCCCCTCCAGACTCCGCCCTTCCCTCCCT CCCTCCCTCCCTCCCTCTCTGCCAAGGCTCCAGCTTCTTCCCCCAGCTGCTCCCGACCAGGAGGGGGAGAGCAGCCTCCACTTACCCCAC CCCACCCTTGGGCTAAAAGCCCCCAGGCGGGCAGGGGGTGACCCCTGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTCTGACACCCC ACCCTGAGCCGCAAGAGCAGTCCTGGGGCCCTGGACCCCTCTGTACAGTCCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCA GCCTGGGACAGGCCCCCTTTCCCCTCTCTCTGCAGGCCAGGAGGGCCTCCTTCCTGCCACGAGGGAGGGGAGTCGGGCCCCAGGTCGCCC CCGCCCCCAGCCCTGCATGCAGGTGCCCTCGCTCCGCCCCATCAGTTCCTGCCCCTGCCCCTCATGCAGACTGCCCTGCTGGGGCCGGGC CGGAGGGTGGAGCAGAAAGGGGACCCCGGAGCCGAGCGAGGAGGACCAGGCAGCCGCCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGG TAGGCGTCCTGCTCGCCGACTTTCAGTTCCTTGGGAGGGTGTTGGGTGTCGTCCTTTTCAAAAGTGTTTTGGAGCTTTCTGTGCCCCCCG ACTTTCCCCCGCCTCCCCGCCCCCCACGTGGCCACTTTTCTCTGGATTTTAGCTGTAATGTCTTTACTCTTTATTTAGGGGTGGGGCATT CATTGTTTGGGTCTTTTGCTGTTGGAATGGGAACTCCTCCTCCATTTGAGCAACTTGGGAACAATTTGGTAACACACCACAGGAAGTAGC TCTCCCCCCCAGCCCCCTCCTCCCTCAAGGGAGGGTTGGGGGGCCTGTCCAGAGGGTCTTCAGAAGCCCCCCTGGGAGGGAGGGGAGGAT GAGCACGCCCAGCTCCCCTCCAGGGTGTGACTTGGCCCCTCTGGCTTGTCTTTCTGTGCCTTACTCCTCCTCCTGCGTCTCCCGTTCCTG >In-frame_ENST00000264827_ENST00000397661_TCGA-S3-AA0Z-01A_HOOK2_chr19_12885483_-_NFIX_chr19_13135835_length(amino acids)=500AA_start in transcript=171_stop in transcript=1673 MSVDKAELCGSLLTWLQTFHVPSPCASPQDLSSGLAVAYVLNQIDPSWFNEAWLQGISEDPGPNWKLKDEFHPFIEALLPHVRAFSYTWF NLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLR QADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDSSNQQGDADIKPLPNGHLS FQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGRS PAAGSSQSSGWPNDVDAGPASLKKSGKLDFCSALSSQGSSPRMAFTHHPLPVLAGVRPGSPRATASALHFPSTSIIQQSSPYFTHPTIRY -------------------------------------------------------------- >In-frame_ENST00000264827_ENST00000592199_TCGA-S3-AA0Z-01A_HOOK2_chr19_12885483_-_NFIX_chr19_13135835_length(transcript)=1857nt_BP=375nt GAGGCGGAGCCTGGGCTTGGGGGCGGGGCGGGGCCTGCGCCTAGGGGGGCGGGGCGGGGCGGCGCTCTAGGCCGAGCGGGAGGTCGGGGC TGCGGGCGCTCGCTGGTGGCGGACCCGGAGGCTGCTGCGGCGCCGGGGCTCCGTGGCCTGGATTGAATCCGATCGGGAGCCATGAGCGTG GACAAAGCTGAGCTATGCGGGTCTCTGCTCACCTGGTTACAGACGTTCCACGTTCCGTCTCCCTGTGCCAGCCCTCAGGACCTGAGCAGC GGCCTTGCCGTAGCCTATGTGCTGAACCAGATAGACCCCTCCTGGTTCAACGAGGCATGGCTCCAGGGCATCTCGGAAGATCCAGGTCCC AACTGGAAGCTGAAGGATGAGTTCCACCCGTTCATCGAGGCACTGCTGCCTCACGTCCGCGCTTTCTCCTACACCTGGTTCAACCTGCAG GCGCGGAAGCGCAAGTACTTCAAGAAGCATGAAAAGCGGATGTCGAAGGACGAGGAGCGGGCGGTGAAGGACGAGCTGCTGGGCGAGAAG CCCGAGATCAAGCAGAAGTGGGCATCCCGGCTGCTGGCCAAGCTGCGCAAGGACATCCGGCCCGAGTTCCGCGAGGACTTCGTGCTGACC ATCACGGGCAAGAAGCCCCCCTGCTGCGTGCTCTCCAACCCCGACCAGAAGGGCAAGATCCGGCGGATTGACTGCCTGCGCCAGGCTGAC AAGGTGTGGCGGCTGGACCTGGTCATGGTGATTTTGTTTAAGGGGATCCCCCTGGAAAGTACTGATGGGGAGCGGCTCTACAAGTCGCCT CAGTGCTCGAACCCCGGCCTGTGCGTCCAGCCACATCACATTGGAGTCACAATCAAAGAACTGGATCTTTATCTGGCTTACTTTGTCCAC ACTCCGGAATCCGGACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGACATCAAACCACTGCCCAACGGGCACTTAAGTTTCCAGGAC TGTTTTGTGACTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAGAGTATCACAGACTCCTGTTGCAACAGCATCAGGGCCCAACTTCTCC CTGGCGGACCTGGAGAGTCCCAGCTACTACAACATCAACCAGGTGACCCTGGGGCGGCGGTCCATCACCTCCCCTCCTTCCACCAGCACC ACCAAGCGCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGTTGATGACGTGTTCTATCCCGGGACAGGCCGTTCCCCAGCAGCT GGCAGCAGCCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAGGCCCGGCTTCTCTAAAGAAGTCAGGAAAGCTGGACTTCTGCAGTGCC CTCTCCTCTCAGGGCAGCTCCCCGCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGGAGCCCCCGGGCC ACAGCATCAGCCCTGCACTTCCCCTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTTCACGCACCCGACCATCCGCTACCACCACCAC CACGGGCAGGACTCACTGAAGGAGTTTGTGCAGTTTGTGTGCTCGGATGGCTCGGGCCAGGCCACCGGACAGCCCAACGGTAGCGGCCAG GGCAAAGTCCCGGGGTCATTTTTGCTACCGCCGCCGCCTCCAGTGGCCAGACCTGTGCCCCTTCCTATGCCTGATTCCAAATCCACCAGC ACTGCCCCAGACGGCGCCGCCTTGACTCCTCCATCACCTTCATTCGCAACGACAGGCGCCTCCTCTGCCAACCGGTTTGTCAGCATCGGA >In-frame_ENST00000264827_ENST00000592199_TCGA-S3-AA0Z-01A_HOOK2_chr19_12885483_-_NFIX_chr19_13135835_length(amino acids)=561AA_start in transcript=171_stop in transcript=1856 MSVDKAELCGSLLTWLQTFHVPSPCASPQDLSSGLAVAYVLNQIDPSWFNEAWLQGISEDPGPNWKLKDEFHPFIEALLPHVRAFSYTWF NLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLR QADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDSSNQQGDADIKPLPNGHLS FQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGRS PAAGSSQSSGWPNDVDAGPASLKKSGKLDFCSALSSQGSSPRMAFTHHPLPVLAGVRPGSPRATASALHFPSTSIIQQSSPYFTHPTIRY HHHHGQDSLKEFVQFVCSDGSGQATGQPNGSGQGKVPGSFLLPPPPPVARPVPLPMPDSKSTSTAPDGAALTPPSPSFATTGASSANRFV -------------------------------------------------------------- >In-frame_ENST00000264827_ENST00000587760_TCGA-S3-AA0Z-01A_HOOK2_chr19_12885483_-_NFIX_chr19_13135835_length(transcript)=1818nt_BP=375nt GAGGCGGAGCCTGGGCTTGGGGGCGGGGCGGGGCCTGCGCCTAGGGGGGCGGGGCGGGGCGGCGCTCTAGGCCGAGCGGGAGGTCGGGGC TGCGGGCGCTCGCTGGTGGCGGACCCGGAGGCTGCTGCGGCGCCGGGGCTCCGTGGCCTGGATTGAATCCGATCGGGAGCCATGAGCGTG GACAAAGCTGAGCTATGCGGGTCTCTGCTCACCTGGTTACAGACGTTCCACGTTCCGTCTCCCTGTGCCAGCCCTCAGGACCTGAGCAGC GGCCTTGCCGTAGCCTATGTGCTGAACCAGATAGACCCCTCCTGGTTCAACGAGGCATGGCTCCAGGGCATCTCGGAAGATCCAGGTCCC AACTGGAAGCTGAAGGATGAGTTCCACCCGTTCATCGAGGCACTGCTGCCTCACGTCCGCGCTTTCTCCTACACCTGGTTCAACCTGCAG GCGCGGAAGCGCAAGTACTTCAAGAAGCATGAAAAGCGGATGTCGAAGGACGAGGAGCGGGCGGTGAAGGACGAGCTGCTGGGCGAGAAG CCCGAGATCAAGCAGAAGTGGGCATCCCGGCTGCTGGCCAAGCTGCGCAAGGACATCCGGCCCGAGTTCCGCGAGGACTTCGTGCTGACC ATCACGGGCAAGAAGCCCCCCTGCTGCGTGCTCTCCAACCCCGACCAGAAGGGCAAGATCCGGCGGATTGACTGCCTGCGCCAGGCTGAC AAGGTGTGGCGGCTGGACCTGGTCATGGTGATTTTGTTTAAGGGGATCCCCCTGGAAAGTACTGATGGGGAGCGGCTCTACAAGTCGCCT CAGTGCTCGAACCCCGGCCTGTGCGTCCAGCCACATCACATTGGAGTCACAATCAAAGAACTGGATCTTTATCTGGCTTACTTTGTCCAC ACTCCGGAATCCGGACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGACATCAAACCACTGCCCAACGGGCACTTAAGTTTCCAGGAC TGTTTTGTGACTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAGAGTATCACAGACTCCTGTTGCAACAGCATCAGGGCCCAACTTCTCC CTGGCGGACCTGGAGAGTCCCAGCTACTACAACATCAACCAGGTGACCCTGGGGCGGCGGTCCATCACCTCCCCTCCTTCCACCAGCACC ACCAAGCGCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGTTGATGACGTGTTCTATCCCGGGACAGGCCGTTCCCCAGCAGCT GGCAGCAGCCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAGGCCCGGCTTCTCTAAAGAAGTCAGGAAAGCTGGACTTCTGCAGTGCC CTCTCCTCTCAGGGCAGCTCCCCGCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGGAGCCCCCGGGCC ACAGCATCAGCCCTGCACTTCCCCTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTTCACGCACCCGACCATCCGCTACCACCACCAC CACGGGCAGGACTCACTGAAGGAGTTTGTGCAGTTTGTGTGCTCGGATGGCTCGGGCCAGGCCACCGGACAGCATTCGCAACGACAGGCG CCTCCTCTGCCAACCGGTTTGTCAGCATCGGACCCCGGGACGGCAACTTTCTGAACATCCCACAGCAGTCTCAGTCCTGGTTCCTCTGAT AAGATCGACAAAAGAAACAACAAAATGAGAAGAAGAGGTTCCTCGAAAGGGGGGAGAAGAAATTTTGAGAATGGAAAAATCCCCCAGCCC >In-frame_ENST00000264827_ENST00000587760_TCGA-S3-AA0Z-01A_HOOK2_chr19_12885483_-_NFIX_chr19_13135835_length(amino acids)=500AA_start in transcript=171_stop in transcript=1673 MSVDKAELCGSLLTWLQTFHVPSPCASPQDLSSGLAVAYVLNQIDPSWFNEAWLQGISEDPGPNWKLKDEFHPFIEALLPHVRAFSYTWF NLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLR QADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDSSNQQGDADIKPLPNGHLS FQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGRS PAAGSSQSSGWPNDVDAGPASLKKSGKLDFCSALSSQGSSPRMAFTHHPLPVLAGVRPGSPRATASALHFPSTSIIQQSSPYFTHPTIRY -------------------------------------------------------------- >In-frame_ENST00000264827_ENST00000585575_TCGA-S3-AA0Z-01A_HOOK2_chr19_12885483_-_NFIX_chr19_13135835_length(transcript)=1857nt_BP=375nt GAGGCGGAGCCTGGGCTTGGGGGCGGGGCGGGGCCTGCGCCTAGGGGGGCGGGGCGGGGCGGCGCTCTAGGCCGAGCGGGAGGTCGGGGC TGCGGGCGCTCGCTGGTGGCGGACCCGGAGGCTGCTGCGGCGCCGGGGCTCCGTGGCCTGGATTGAATCCGATCGGGAGCCATGAGCGTG GACAAAGCTGAGCTATGCGGGTCTCTGCTCACCTGGTTACAGACGTTCCACGTTCCGTCTCCCTGTGCCAGCCCTCAGGACCTGAGCAGC GGCCTTGCCGTAGCCTATGTGCTGAACCAGATAGACCCCTCCTGGTTCAACGAGGCATGGCTCCAGGGCATCTCGGAAGATCCAGGTCCC AACTGGAAGCTGAAGGATGAGTTCCACCCGTTCATCGAGGCACTGCTGCCTCACGTCCGCGCTTTCTCCTACACCTGGTTCAACCTGCAG GCGCGGAAGCGCAAGTACTTCAAGAAGCATGAAAAGCGGATGTCGAAGGACGAGGAGCGGGCGGTGAAGGACGAGCTGCTGGGCGAGAAG CCCGAGATCAAGCAGAAGTGGGCATCCCGGCTGCTGGCCAAGCTGCGCAAGGACATCCGGCCCGAGTTCCGCGAGGACTTCGTGCTGACC ATCACGGGCAAGAAGCCCCCCTGCTGCGTGCTCTCCAACCCCGACCAGAAGGGCAAGATCCGGCGGATTGACTGCCTGCGCCAGGCTGAC AAGGTGTGGCGGCTGGACCTGGTCATGGTGATTTTGTTTAAGGGGATCCCCCTGGAAAGTACTGATGGGGAGCGGCTCTACAAGTCGCCT CAGTGCTCGAACCCCGGCCTGTGCGTCCAGCCACATCACATTGGAGTCACAATCAAAGAACTGGATCTTTATCTGGCTTACTTTGTCCAC ACTCCGGAATCCGGACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGACATCAAACCACTGCCCAACGGGCACTTAAGTTTCCAGGAC TGTTTTGTGACTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAGAGTATCACAGACTCCTGTTGCAACAGCATCAGGGCCCAACTTCTCC CTGGCGGACCTGGAGAGTCCCAGCTACTACAACATCAACCAGGTGACCCTGGGGCGGCGGTCCATCACCTCCCCTCCTTCCACCAGCACC ACCAAGCGCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGTTGATGACGTGTTCTATCCCGGGACAGGCCGTTCCCCAGCAGCT GGCAGCAGCCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAGGCCCGGCTTCTCTAAAGAAGTCAGGAAAGCTGGACTTCTGCAGTGCC CTCTCCTCTCAGGGCAGCTCCCCGCGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGGAGCCCCCGGGCC ACAGCATCAGCCCTGCACTTCCCCTCCACGTCCATCATCCAGCAGTCGAGCCCGTATTTCACGCACCCGACCATCCGCTACCACCACCAC CACGGGCAGGACTCACTGAAGGAGTTTGTGCAGTTTGTGTGCTCGGATGGCTCGGGCCAGGCCACCGGACAGCCCAACGGTAGCGGCCAG GGCAAAGTCCCGGGGTCATTTTTGCTACCGCCGCCGCCTCCAGTGGCCAGACCTGTGCCCCTTCCTATGCCTGATTCCAAATCCACCAGC ACTGCCCCAGACGGCGCCGCCTTGACTCCTCCATCACCTTCATTCGCAACGACAGGCGCCTCCTCTGCCAACCGGTTTGTCAGCATCGGA >In-frame_ENST00000264827_ENST00000585575_TCGA-S3-AA0Z-01A_HOOK2_chr19_12885483_-_NFIX_chr19_13135835_length(amino acids)=561AA_start in transcript=171_stop in transcript=1856 MSVDKAELCGSLLTWLQTFHVPSPCASPQDLSSGLAVAYVLNQIDPSWFNEAWLQGISEDPGPNWKLKDEFHPFIEALLPHVRAFSYTWF NLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLR QADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDSSNQQGDADIKPLPNGHLS FQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGRS PAAGSSQSSGWPNDVDAGPASLKKSGKLDFCSALSSQGSSPRMAFTHHPLPVLAGVRPGSPRATASALHFPSTSIIQQSSPYFTHPTIRY HHHHGQDSLKEFVQFVCSDGSGQATGQPNGSGQGKVPGSFLLPPPPPVARPVPLPMPDSKSTSTAPDGAALTPPSPSFATTGASSANRFV -------------------------------------------------------------- >In-frame_ENST00000264827_ENST00000360105_TCGA-S3-AA0Z-01A_HOOK2_chr19_12885483_-_NFIX_chr19_13135835_length(transcript)=5733nt_BP=375nt GAGGCGGAGCCTGGGCTTGGGGGCGGGGCGGGGCCTGCGCCTAGGGGGGCGGGGCGGGGCGGCGCTCTAGGCCGAGCGGGAGGTCGGGGC TGCGGGCGCTCGCTGGTGGCGGACCCGGAGGCTGCTGCGGCGCCGGGGCTCCGTGGCCTGGATTGAATCCGATCGGGAGCCATGAGCGTG GACAAAGCTGAGCTATGCGGGTCTCTGCTCACCTGGTTACAGACGTTCCACGTTCCGTCTCCCTGTGCCAGCCCTCAGGACCTGAGCAGC GGCCTTGCCGTAGCCTATGTGCTGAACCAGATAGACCCCTCCTGGTTCAACGAGGCATGGCTCCAGGGCATCTCGGAAGATCCAGGTCCC AACTGGAAGCTGAAGGATGAGTTCCACCCGTTCATCGAGGCACTGCTGCCTCACGTCCGCGCTTTCTCCTACACCTGGTTCAACCTGCAG GCGCGGAAGCGCAAGTACTTCAAGAAGCATGAAAAGCGGATGTCGAAGGACGAGGAGCGGGCGGTGAAGGACGAGCTGCTGGGCGAGAAG CCCGAGATCAAGCAGAAGTGGGCATCCCGGCTGCTGGCCAAGCTGCGCAAGGACATCCGGCCCGAGTTCCGCGAGGACTTCGTGCTGACC ATCACGGGCAAGAAGCCCCCCTGCTGCGTGCTCTCCAACCCCGACCAGAAGGGCAAGATCCGGCGGATTGACTGCCTGCGCCAGGCTGAC AAGGTGTGGCGGCTGGACCTGGTCATGGTGATTTTGTTTAAGGGGATCCCCCTGGAAAGTACTGATGGGGAGCGGCTCTACAAGTCGCCT CAGTGCTCGAACCCCGGCCTGTGCGTCCAGCCACATCACATTGGAGTCACAATCAAAGAACTGGATCTTTATCTGGCTTACTTTGTCCAC ACTCCGGAATCCGGACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGACATCAAACCACTGCCCAACGGGCACTTAAGTTTCCAGGAC TGTTTTGTGACTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAGAGTATCACAGACTCCTGTTGCAACAGCATCAGGGCCCAACTTCTCC CTGGCGGACCTGGAGAGTCCCAGCTACTACAACATCAACCAGGTGACCCTGGGGCGGCGGTCCATCACCTCCCCTCCTTCCACCAGCACC ACCAAGCGCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCTGTTGATGACGTGTTCTATCCCGGGACAGGCCGTTCCCCAGCAGCT GGCAGCAGCCAGTCCAGCGGGTGGCCCAACGATGTGGATGCAGGGAGCCCCCGGGCCACAGCATCAGCCCTGCACTTCCCCTCCACGTCC ATCATCCAGCAGTCGAGCCCGTATTTCACGCACCCGACCATCCGCTACCACCACCACCACGGGCAGGACTCACTGAAGGAGTTTGTGCAG TTTGTGTGCTCGGATGGCTCGGGCCAGGCCACCGGACAGCATTCGCAACGACAGGCGCCTCCTCTGCCAACCGGTTTGTCAGCATCGGAC CCCGGGACGGCAACTTTCTGAACATCCCACAGCAGTCTCAGTCCTGGTTCCTCTGATAAGATCGACAAAAGAAACAACAAAATGAGAAGA AGAGGTTCCTCGAAAGGGGGGAGAAGAAATTTTGAGAATGGAAAAATCCCCCAGCCCAGCCCAGCCCCACCGAAAAGCAAAAATTACACG TCGTCAGCCACTCAGCCCTTCTCTCCTCCAGCCCGGGGACCCCCGCGGGCCCCAGAAGCAGCCCAGTTCTCAGAGAGCCCTTGGAAGGGG TCTCGGTGGAGCTGTGCACCAGCAGCCAAGCAGAAAGAAACACGCGACATGGACTCTGTCAAGTAGAGGACAGAAAGCAAGAAAGGATGC AGAACTGCCTTCCTCCCCCTGACCCCGCCCCGGCCTTCTGGGGAAGGAACAAAGTCCCCAAACAAAGCAACCAGCACAATTCTGAAGGGG CCTGGCCTCCACCCTCACCCCTTCCTAGGGGAACCCCACCCTCCACACAGCCGGAGCTGCCCTAGGGAGCCTGGAGGGCCAGCTTGTAAA GATGATGGGGTTTAGATCCCTCAGGCTCTCCCCTCCAGACTCCGCCCTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTGCCAAGGCTCCAG CTTCTTCCCCCAGCTGCTCCCGACCAGGAGGGGGAGAGCAGCCTCCACTTACCCCACCCCACCCTTGGGCTAAAAGCCCCCAGGCGGGCA GGGGGTGACCCCTGGAGCTAGTTGCGTGTCCCAGAATGGAGGGTGTTCTGACACCCCACCCTGAGCCGCAAGAGCAGTCCTGGGGCCCTG GACCCCTCTGTACAGTCCGTAGGAAAAAGTCGGAATGCTCTCGACGGCCTCGTCCCAGCCTGGGACAGGCCCCCTTTCCCCTCTCTCTGC AGGCCAGGAGGGCCTCCTTCCTGCCACGAGGGAGGGGAGTCGGGCCCCAGGTCGCCCCCGCCCCCAGCCCTGCATGCAGGTGCCCTCGCT CCGCCCCATCAGTTCCTGCCCCTGCCCCTCATGCAGACTGCCCTGCTGGGGCCGGGCCGGAGGGTGGAGCAGAAAGGGGACCCCGGAGCC GAGCGAGGAGGACCAGGCAGCCGCCGCTGCCGCGCTAAGCCACCACCTGCGCTTAGGTAGGCGTCCTGCTCGCCGACTTTCAGTTCCTTG GGAGGGTGTTGGGTGTCGTCCTTTTCAAAAGTGTTTTGGAGCTTTCTGTGCCCCCCGACTTTCCCCCGCCTCCCCGCCCCCCACGTGGCC ACTTTTCTCTGGATTTTAGCTGTAATGTCTTTACTCTTTATTTAGGGGTGGGGCATTCATTGTTTGGGTCTTTTGCTGTTGGAATGGGAA CTCCTCCTCCATTTGAGCAACTTGGGAACAATTTGGTAACACACCACAGGAAGTAGCTCTCCCCCCCAGCCCCCTCCTCCCTCAAGGGAG GGTTGGGGGGCCTGTCCAGAGGGTCTTCAGAAGCCCCCCTGGGAGGGAGGGGAGGATGAGCACGCCCAGCTCCCCTCCAGGGTGTGACTT GGCCCCTCTGGCTTGTCTTTCTGTGCCTTACTCCTCCTCCTGCGTCTCCCGTTCCTGGCCCCTTCTTGAGTCCTTGTGCCTCTCTCTTTC TCTCTCTTTCTTAATTGTATGAAAACACAAAGCACAGGTCAGGATCCTCTGAGAGAAAATCAACATTGCACCACGTAGGGGTGGGCTATG GGCTGTATTTATTGTGAATCTAGTTTGTGAGGCTGTGGCCCCGAGCTGGCGGAGGGAGGGAAGAGGAGGGAGTGACGGGAGGGGAGGAGG TCAGCGACCTGGGGCCGTAGCGGCAGGCGAACGGTGCCTGCTACCCAGCTGGAAGCCACAAGGTGGCTGGCTCCAGGGGCGGCTTTTGTT GGAAGTTGAGTGAAGCCCTCCCCCTGTCCTCAGCGTGCAGCCCTAGAGGACCCCAGGGCTGAGGGGCAGTGGATCCTGCGGGAGTCTCCC GGGGCGTGGGGAGTAAGGCCCCGGGGGTGGGGGGCCGGGTGGGCCGGGCGTGACGCGCGGTCAAAGTGCAATGATTTTTCAGTTCGGTTG GCTAAACAGGGTCAGAGCTGAGAGCGAAGCAGAAGGGGCTCCCTGTCCGGCCCACGTGCCCTTTCCCTCGACGACAGTCGAGGGCTCGGG CTCTGTGGGACTGTGGGAGCTAGGGTCTGCGGGGCGCCTGCCCGGGCGAGGTCGGAAGCTGCAGGCCAGCTGGGCCCGGGCCGGAGCGTG CCCGGCGGGGCTGCCCGGGCGGGCAGGGGGTGGGGGCTGCTCCTTTCCCAAGTGGTGTTGTGAGGGGCAATGAGGGCAACAGGAGATGTG GGGACGTGTTAGGAGAGAAAAAAAAAAAAACAAAAATATATATGGGGGAAATTAACTTTTTTTTTTCATTGAACCAAGTGCAATGCATCA GAGAGTTTTCCTATCTTTGTATGTTAAGAGATTAAGAAAAAAAAATTCTATTTTTGTTGTAATGTCCTCGCGGCTCTGGGGACGCTAAAA GAACCGGGCCTGCCCCGCCCTGCGCGGGGATAACGAAAGCTGAGTGTTTTTCCCTTTTTTTTGTTCGTTTTTAGTTTTTTTTTTTTTAAG TCGTTTTCCTGCGTTGACGAGGATGATCTGGGGTTTTTATTTGTTTCGTCGTTCGTTCTGTTTCGGTGGGAGGGCTGAAGGAAACGTTCA CATTTTAGAGTTTAAAAAAAACACCTCGACATTTAAAAAATCAACCAACACAAGATCAAAAAGGAAAAGGACGAGAGAAAAATTATTTTT AAGATAATTAAACATAAAACCCTGGTGCTTCTTACATTATAAAGTACGTTTTAAAGAACCCACAAACTATTATACATAAGTTTATGAATC AATTAAATATCCTGCACTTGTTAGGAATACGCATATCCCTTCTTTGTTGAGTTTAACGGAACGGGACAGCGGCGTGCCCCCGGCGGCTGG ACTGCTCCGGCCGCGGGTCTCCCCGGGCGCCCCTCCCTGGGGCCCAGCACCCCTCCTCGCCCCATCCCCGTCCGGGTACGGGGGCGCGGC AGGGGTCCCCGGCCCCTCCCCCGCAGAGGTCAATGCCAACGAACAAACGTCCCCTCCCTCCCTCCCTCTCCGCCCCGAGCGCCCTTCTTT GAGCCAGACGCCAACTTGACCCTCACCAGCATTATCAGGAGCGCGCTCAGCAAGTTGGTAGTTTCCTCCCCCCTTTCCCGGCGCCCCTCC CGCCCCCATTCAACATCTCTCATCCTATCCCCGACCCCCTCCGGGGAACACCGGGAAGGCTCGACGCTCCAGGACAGGACCAGCCACGCA GACAGGTCGATTTGCCCAGGCCCGCGCCCGCACGCACGCACGCACACGGCCCCGCACACAGCCCCGCCCCACCCCGCAACCAGCCCTGTC GACTGCCTTATACACCCGCCCCCGCGCTGGCCGGCCGACCTAGTGCCTTGTTCTCACCCCCGTGCTGGCGGAGCGGACGCCGCGCTCTGG GTCCCAGAGGGGCCGGGTGGCTCAGACGACCCACCACTCCCCCACCCTGACCGTGCTGAACAGACCCCCCCACACGAGAGAAAATAAAGG AGCAATAAAGTCACGAGAACTTTCGTCCCCCAATCGAGAGCCCGAGGGGCACCCCAGCCCCGCCTCTGCTCCCCCCCACCCCACCCACCC TCGGGGCGCCCCCCTCCCCCCGCAAGCCAGCCTGGGCCAGCCCCGCTTCGGCCCCTCCCGGGAGATCCGTGCGCCCGACCAGCACCAGCA TCGCGGACCGCAAAGGCCGCCCGTCCCGTCAAACAAGTTTCTTCTTAGGCTAAGAAACGCAGTATATACGAGTATCTCTATATATAGTAC TAATGGATTTGGTGTGCTTCCCCCTTAGCGTCCCCCTCCCTCTGCTCCTCCTCCTTCAGCCTGGTCTCCCCCTCTTCTCTGCCCTCCACC CCCGTCTCTGCACTGAGATACATAAGAAACAAGGGTAGTTTACTGTCTGTTTTGTTTTCTGGGTTTTCAGTGTCCTAGCGGAATGCAAGT AGGCAGCCAGCCCGTCTGTTCCCTCTCCGCCCCGCCCCGCCCCGCCCCCGTCACTGCGCTTCTGTTATACCATCTTTGCCTGACTCTCTC >In-frame_ENST00000264827_ENST00000360105_TCGA-S3-AA0Z-01A_HOOK2_chr19_12885483_-_NFIX_chr19_13135835_length(amino acids)=459AA_start in transcript=171_stop in transcript=1550 MSVDKAELCGSLLTWLQTFHVPSPCASPQDLSSGLAVAYVLNQIDPSWFNEAWLQGISEDPGPNWKLKDEFHPFIEALLPHVRAFSYTWF NLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLR QADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDSSNQQGDADIKPLPNGHLS FQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGRS PAAGSSQSSGWPNDVDAGSPRATASALHFPSTSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQFVCSDGSGQATGQHSQRQAPPLPTGLS -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for HOOK2-NFIX |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for HOOK2-NFIX |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for HOOK2-NFIX |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | NFIX | C3553660 | Malan overgrowth syndrome | 5 | GENOMICS_ENGLAND;ORPHANET;UNIPROT |
Tgene | NFIX | C0265211 | Marshall-Smith syndrome | 2 | CTD_human;GENOMICS_ENGLAND;ORPHANET |
Tgene | NFIX | C0005586 | Bipolar Disorder | 1 | PSYGENET |