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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:ILK-LPPR1 (FusionGDB2 ID:39468) |
Fusion Gene Summary for ILK-LPPR1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: ILK-LPPR1 | Fusion gene ID: 39468 | Hgene | Tgene | Gene symbol | ILK | LPPR1 | Gene ID | 3611 | 54886 |
Gene name | integrin linked kinase | phospholipid phosphatase related 1 | |
Synonyms | HEL-S-28|ILK-1|ILK-2|P59|p59ILK | LPPR1|PRG-3 | |
Cytomap | 11p15.4 | 9q31.1 | |
Type of gene | protein-coding | protein-coding | |
Description | integrin-linked protein kinase59 kDa serine/threonine-protein kinaseepididymis secretory protein Li 28integrin-linked kinase-2 | phospholipid phosphatase-related protein type 1lipid phosphate phosphatase-related protein type 1plasticity related gene 3plasticity-related gene 3 protein | |
Modification date | 20200320 | 20200313 | |
UniProtAcc | Q13418 | . | |
Ensembl transtripts involved in fusion gene | ENST00000299421, ENST00000537806, ENST00000420936, ENST00000528995, ENST00000396751, ENST00000526711, | ENST00000374874, ENST00000395056, ENST00000494890, | |
Fusion gene scores | * DoF score | 4 X 6 X 2=48 | 2 X 4 X 2=16 |
# samples | 7 | 4 | |
** MAII score | log2(7/48*10)=0.54432051622381 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(4/16*10)=1.32192809488736 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: ILK [Title/Abstract] AND LPPR1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | ILK(6629441)-LPPR1(104075079), # samples:1 ILK(6629441)-LPPR1(104075080), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | ILK | GO:0006468 | protein phosphorylation | 10871859 |
Hgene | ILK | GO:0007229 | integrin-mediated signaling pathway | 9366252 |
Fusion gene breakpoints across ILK (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across LPPR1 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | OV | TCGA-24-1434 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + |
ChimerDB4 | OV | TCGA-24-1434-01A | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075080 | + |
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Fusion Gene ORF analysis for ILK-LPPR1 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000299421 | ENST00000374874 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + |
In-frame | ENST00000299421 | ENST00000395056 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + |
5CDS-intron | ENST00000299421 | ENST00000494890 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + |
intron-3CDS | ENST00000537806 | ENST00000374874 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + |
intron-3CDS | ENST00000537806 | ENST00000395056 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + |
intron-intron | ENST00000537806 | ENST00000494890 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + |
In-frame | ENST00000420936 | ENST00000374874 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + |
In-frame | ENST00000420936 | ENST00000395056 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + |
5CDS-intron | ENST00000420936 | ENST00000494890 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + |
In-frame | ENST00000528995 | ENST00000374874 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + |
In-frame | ENST00000528995 | ENST00000395056 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + |
5CDS-intron | ENST00000528995 | ENST00000494890 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + |
In-frame | ENST00000396751 | ENST00000374874 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + |
In-frame | ENST00000396751 | ENST00000395056 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + |
5CDS-intron | ENST00000396751 | ENST00000494890 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + |
intron-3CDS | ENST00000526711 | ENST00000374874 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + |
intron-3CDS | ENST00000526711 | ENST00000395056 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + |
intron-intron | ENST00000526711 | ENST00000494890 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + |
In-frame | ENST00000299421 | ENST00000374874 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075080 | + |
In-frame | ENST00000299421 | ENST00000395056 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075080 | + |
5CDS-intron | ENST00000299421 | ENST00000494890 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075080 | + |
intron-3CDS | ENST00000537806 | ENST00000374874 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075080 | + |
intron-3CDS | ENST00000537806 | ENST00000395056 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075080 | + |
intron-intron | ENST00000537806 | ENST00000494890 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075080 | + |
In-frame | ENST00000420936 | ENST00000374874 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075080 | + |
In-frame | ENST00000420936 | ENST00000395056 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075080 | + |
5CDS-intron | ENST00000420936 | ENST00000494890 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075080 | + |
In-frame | ENST00000528995 | ENST00000374874 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075080 | + |
In-frame | ENST00000528995 | ENST00000395056 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075080 | + |
5CDS-intron | ENST00000528995 | ENST00000494890 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075080 | + |
In-frame | ENST00000396751 | ENST00000374874 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075080 | + |
In-frame | ENST00000396751 | ENST00000395056 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075080 | + |
5CDS-intron | ENST00000396751 | ENST00000494890 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075080 | + |
intron-3CDS | ENST00000526711 | ENST00000374874 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075080 | + |
intron-3CDS | ENST00000526711 | ENST00000395056 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075080 | + |
intron-intron | ENST00000526711 | ENST00000494890 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075080 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000299421 | ILK | chr11 | 6629441 | + | ENST00000374874 | LPPR1 | chr9 | 104075079 | + | 1859 | 439 | 184 | 780 | 198 |
ENST00000299421 | ILK | chr11 | 6629441 | + | ENST00000395056 | LPPR1 | chr9 | 104075079 | + | 1855 | 439 | 184 | 780 | 198 |
ENST00000420936 | ILK | chr11 | 6629441 | + | ENST00000374874 | LPPR1 | chr9 | 104075079 | + | 1786 | 366 | 48 | 707 | 219 |
ENST00000420936 | ILK | chr11 | 6629441 | + | ENST00000395056 | LPPR1 | chr9 | 104075079 | + | 1782 | 366 | 48 | 707 | 219 |
ENST00000528995 | ILK | chr11 | 6629441 | + | ENST00000374874 | LPPR1 | chr9 | 104075079 | + | 1803 | 383 | 128 | 724 | 198 |
ENST00000528995 | ILK | chr11 | 6629441 | + | ENST00000395056 | LPPR1 | chr9 | 104075079 | + | 1799 | 383 | 128 | 724 | 198 |
ENST00000396751 | ILK | chr11 | 6629441 | + | ENST00000374874 | LPPR1 | chr9 | 104075079 | + | 2131 | 711 | 219 | 1052 | 277 |
ENST00000396751 | ILK | chr11 | 6629441 | + | ENST00000395056 | LPPR1 | chr9 | 104075079 | + | 2127 | 711 | 219 | 1052 | 277 |
ENST00000299421 | ILK | chr11 | 6629441 | + | ENST00000374874 | LPPR1 | chr9 | 104075080 | + | 1859 | 439 | 184 | 780 | 198 |
ENST00000299421 | ILK | chr11 | 6629441 | + | ENST00000395056 | LPPR1 | chr9 | 104075080 | + | 1855 | 439 | 184 | 780 | 198 |
ENST00000420936 | ILK | chr11 | 6629441 | + | ENST00000374874 | LPPR1 | chr9 | 104075080 | + | 1786 | 366 | 48 | 707 | 219 |
ENST00000420936 | ILK | chr11 | 6629441 | + | ENST00000395056 | LPPR1 | chr9 | 104075080 | + | 1782 | 366 | 48 | 707 | 219 |
ENST00000528995 | ILK | chr11 | 6629441 | + | ENST00000374874 | LPPR1 | chr9 | 104075080 | + | 1803 | 383 | 128 | 724 | 198 |
ENST00000528995 | ILK | chr11 | 6629441 | + | ENST00000395056 | LPPR1 | chr9 | 104075080 | + | 1799 | 383 | 128 | 724 | 198 |
ENST00000396751 | ILK | chr11 | 6629441 | + | ENST00000374874 | LPPR1 | chr9 | 104075080 | + | 2131 | 711 | 219 | 1052 | 277 |
ENST00000396751 | ILK | chr11 | 6629441 | + | ENST00000395056 | LPPR1 | chr9 | 104075080 | + | 2127 | 711 | 219 | 1052 | 277 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000299421 | ENST00000374874 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + | 0.002297975 | 0.99770206 |
ENST00000299421 | ENST00000395056 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + | 0.002335445 | 0.9976646 |
ENST00000420936 | ENST00000374874 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + | 0.003186808 | 0.99681324 |
ENST00000420936 | ENST00000395056 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + | 0.003219204 | 0.99678075 |
ENST00000528995 | ENST00000374874 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + | 0.004062502 | 0.99593747 |
ENST00000528995 | ENST00000395056 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + | 0.004110504 | 0.9958895 |
ENST00000396751 | ENST00000374874 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + | 0.006987919 | 0.99301213 |
ENST00000396751 | ENST00000395056 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + | 0.00714633 | 0.9928537 |
ENST00000299421 | ENST00000374874 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075080 | + | 0.002297975 | 0.99770206 |
ENST00000299421 | ENST00000395056 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075080 | + | 0.002335445 | 0.9976646 |
ENST00000420936 | ENST00000374874 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075080 | + | 0.003186808 | 0.99681324 |
ENST00000420936 | ENST00000395056 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075080 | + | 0.003219204 | 0.99678075 |
ENST00000528995 | ENST00000374874 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075080 | + | 0.004062502 | 0.99593747 |
ENST00000528995 | ENST00000395056 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075080 | + | 0.004110504 | 0.9958895 |
ENST00000396751 | ENST00000374874 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075080 | + | 0.006987919 | 0.99301213 |
ENST00000396751 | ENST00000395056 | ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075080 | + | 0.00714633 | 0.9928537 |
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Fusion Genomic Features for ILK-LPPR1 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + | 0.058713324 | 0.9412866 |
ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + | 0.058713324 | 0.9412866 |
ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + | 0.058713324 | 0.9412866 |
ILK | chr11 | 6629441 | + | LPPR1 | chr9 | 104075079 | + | 0.058713324 | 0.9412866 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for ILK-LPPR1 |
Go to FGviewer for the breakpoints of chr11:6629441-chr9:104075079 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
ILK | . |
FUNCTION: Receptor-proximal protein kinase regulating integrin-mediated signal transduction (PubMed:8538749, PubMed:9736715). May act as a mediator of inside-out integrin signaling (PubMed:10712922). Focal adhesion protein part of the complex ILK-PINCH (PubMed:10712922). This complex is considered to be one of the convergence points of integrin- and growth factor-signaling pathway (PubMed:10712922). Could be implicated in mediating cell architecture, adhesion to integrin substrates and anchorage-dependent growth in epithelial cells (PubMed:10712922). Regulates cell motility by forming a complex with PARVB (PubMed:32528174). Phosphorylates beta-1 and beta-3 integrin subunit on serine and threonine residues, but also AKT1 and GSK3B (PubMed:8538749, PubMed:9736715). {ECO:0000269|PubMed:32528174, ECO:0000269|PubMed:8538749, ECO:0000269|PubMed:9736715, ECO:0000303|PubMed:10712922}. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ILK | chr11:6629441 | chr9:104075079 | ENST00000299421 | + | 3 | 13 | 2_30 | 85.0 | 453.0 | Repeat | Note=ANK 1 |
Hgene | ILK | chr11:6629441 | chr9:104075079 | ENST00000299421 | + | 3 | 13 | 31_63 | 85.0 | 453.0 | Repeat | Note=ANK 2 |
Hgene | ILK | chr11:6629441 | chr9:104075079 | ENST00000396751 | + | 2 | 12 | 2_30 | 85.0 | 453.0 | Repeat | Note=ANK 1 |
Hgene | ILK | chr11:6629441 | chr9:104075079 | ENST00000396751 | + | 2 | 12 | 31_63 | 85.0 | 453.0 | Repeat | Note=ANK 2 |
Hgene | ILK | chr11:6629441 | chr9:104075079 | ENST00000420936 | + | 3 | 13 | 2_30 | 85.0 | 453.0 | Repeat | Note=ANK 1 |
Hgene | ILK | chr11:6629441 | chr9:104075079 | ENST00000420936 | + | 3 | 13 | 31_63 | 85.0 | 453.0 | Repeat | Note=ANK 2 |
Hgene | ILK | chr11:6629441 | chr9:104075080 | ENST00000299421 | + | 3 | 13 | 2_30 | 85.0 | 453.0 | Repeat | Note=ANK 1 |
Hgene | ILK | chr11:6629441 | chr9:104075080 | ENST00000299421 | + | 3 | 13 | 31_63 | 85.0 | 453.0 | Repeat | Note=ANK 2 |
Hgene | ILK | chr11:6629441 | chr9:104075080 | ENST00000396751 | + | 2 | 12 | 2_30 | 85.0 | 453.0 | Repeat | Note=ANK 1 |
Hgene | ILK | chr11:6629441 | chr9:104075080 | ENST00000396751 | + | 2 | 12 | 31_63 | 85.0 | 453.0 | Repeat | Note=ANK 2 |
Hgene | ILK | chr11:6629441 | chr9:104075080 | ENST00000420936 | + | 3 | 13 | 2_30 | 85.0 | 453.0 | Repeat | Note=ANK 1 |
Hgene | ILK | chr11:6629441 | chr9:104075080 | ENST00000420936 | + | 3 | 13 | 31_63 | 85.0 | 453.0 | Repeat | Note=ANK 2 |
Tgene | LPPR1 | chr11:6629441 | chr9:104075079 | ENST00000374874 | 4 | 8 | 230_247 | 212.0 | 326.0 | Transmembrane | Helical | |
Tgene | LPPR1 | chr11:6629441 | chr9:104075079 | ENST00000374874 | 4 | 8 | 257_277 | 212.0 | 326.0 | Transmembrane | Helical | |
Tgene | LPPR1 | chr11:6629441 | chr9:104075079 | ENST00000395056 | 4 | 8 | 230_247 | 212.0 | 326.0 | Transmembrane | Helical | |
Tgene | LPPR1 | chr11:6629441 | chr9:104075079 | ENST00000395056 | 4 | 8 | 257_277 | 212.0 | 326.0 | Transmembrane | Helical | |
Tgene | LPPR1 | chr11:6629441 | chr9:104075080 | ENST00000374874 | 4 | 8 | 230_247 | 212.0 | 326.0 | Transmembrane | Helical | |
Tgene | LPPR1 | chr11:6629441 | chr9:104075080 | ENST00000374874 | 4 | 8 | 257_277 | 212.0 | 326.0 | Transmembrane | Helical | |
Tgene | LPPR1 | chr11:6629441 | chr9:104075080 | ENST00000395056 | 4 | 8 | 230_247 | 212.0 | 326.0 | Transmembrane | Helical | |
Tgene | LPPR1 | chr11:6629441 | chr9:104075080 | ENST00000395056 | 4 | 8 | 257_277 | 212.0 | 326.0 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ILK | chr11:6629441 | chr9:104075079 | ENST00000299421 | + | 3 | 13 | 193_446 | 85.0 | 453.0 | Domain | Protein kinase |
Hgene | ILK | chr11:6629441 | chr9:104075079 | ENST00000396751 | + | 2 | 12 | 193_446 | 85.0 | 453.0 | Domain | Protein kinase |
Hgene | ILK | chr11:6629441 | chr9:104075079 | ENST00000420936 | + | 3 | 13 | 193_446 | 85.0 | 453.0 | Domain | Protein kinase |
Hgene | ILK | chr11:6629441 | chr9:104075080 | ENST00000299421 | + | 3 | 13 | 193_446 | 85.0 | 453.0 | Domain | Protein kinase |
Hgene | ILK | chr11:6629441 | chr9:104075080 | ENST00000396751 | + | 2 | 12 | 193_446 | 85.0 | 453.0 | Domain | Protein kinase |
Hgene | ILK | chr11:6629441 | chr9:104075080 | ENST00000420936 | + | 3 | 13 | 193_446 | 85.0 | 453.0 | Domain | Protein kinase |
Hgene | ILK | chr11:6629441 | chr9:104075079 | ENST00000299421 | + | 3 | 13 | 199_207 | 85.0 | 453.0 | Nucleotide binding | ATP |
Hgene | ILK | chr11:6629441 | chr9:104075079 | ENST00000396751 | + | 2 | 12 | 199_207 | 85.0 | 453.0 | Nucleotide binding | ATP |
Hgene | ILK | chr11:6629441 | chr9:104075079 | ENST00000420936 | + | 3 | 13 | 199_207 | 85.0 | 453.0 | Nucleotide binding | ATP |
Hgene | ILK | chr11:6629441 | chr9:104075080 | ENST00000299421 | + | 3 | 13 | 199_207 | 85.0 | 453.0 | Nucleotide binding | ATP |
Hgene | ILK | chr11:6629441 | chr9:104075080 | ENST00000396751 | + | 2 | 12 | 199_207 | 85.0 | 453.0 | Nucleotide binding | ATP |
Hgene | ILK | chr11:6629441 | chr9:104075080 | ENST00000420936 | + | 3 | 13 | 199_207 | 85.0 | 453.0 | Nucleotide binding | ATP |
Hgene | ILK | chr11:6629441 | chr9:104075079 | ENST00000299421 | + | 3 | 13 | 130_174 | 85.0 | 453.0 | Repeat | Note=ANK 5 |
Hgene | ILK | chr11:6629441 | chr9:104075079 | ENST00000299421 | + | 3 | 13 | 64_96 | 85.0 | 453.0 | Repeat | Note=ANK 3 |
Hgene | ILK | chr11:6629441 | chr9:104075079 | ENST00000299421 | + | 3 | 13 | 97_129 | 85.0 | 453.0 | Repeat | Note=ANK 4 |
Hgene | ILK | chr11:6629441 | chr9:104075079 | ENST00000396751 | + | 2 | 12 | 130_174 | 85.0 | 453.0 | Repeat | Note=ANK 5 |
Hgene | ILK | chr11:6629441 | chr9:104075079 | ENST00000396751 | + | 2 | 12 | 64_96 | 85.0 | 453.0 | Repeat | Note=ANK 3 |
Hgene | ILK | chr11:6629441 | chr9:104075079 | ENST00000396751 | + | 2 | 12 | 97_129 | 85.0 | 453.0 | Repeat | Note=ANK 4 |
Hgene | ILK | chr11:6629441 | chr9:104075079 | ENST00000420936 | + | 3 | 13 | 130_174 | 85.0 | 453.0 | Repeat | Note=ANK 5 |
Hgene | ILK | chr11:6629441 | chr9:104075079 | ENST00000420936 | + | 3 | 13 | 64_96 | 85.0 | 453.0 | Repeat | Note=ANK 3 |
Hgene | ILK | chr11:6629441 | chr9:104075079 | ENST00000420936 | + | 3 | 13 | 97_129 | 85.0 | 453.0 | Repeat | Note=ANK 4 |
Hgene | ILK | chr11:6629441 | chr9:104075080 | ENST00000299421 | + | 3 | 13 | 130_174 | 85.0 | 453.0 | Repeat | Note=ANK 5 |
Hgene | ILK | chr11:6629441 | chr9:104075080 | ENST00000299421 | + | 3 | 13 | 64_96 | 85.0 | 453.0 | Repeat | Note=ANK 3 |
Hgene | ILK | chr11:6629441 | chr9:104075080 | ENST00000299421 | + | 3 | 13 | 97_129 | 85.0 | 453.0 | Repeat | Note=ANK 4 |
Hgene | ILK | chr11:6629441 | chr9:104075080 | ENST00000396751 | + | 2 | 12 | 130_174 | 85.0 | 453.0 | Repeat | Note=ANK 5 |
Hgene | ILK | chr11:6629441 | chr9:104075080 | ENST00000396751 | + | 2 | 12 | 64_96 | 85.0 | 453.0 | Repeat | Note=ANK 3 |
Hgene | ILK | chr11:6629441 | chr9:104075080 | ENST00000396751 | + | 2 | 12 | 97_129 | 85.0 | 453.0 | Repeat | Note=ANK 4 |
Hgene | ILK | chr11:6629441 | chr9:104075080 | ENST00000420936 | + | 3 | 13 | 130_174 | 85.0 | 453.0 | Repeat | Note=ANK 5 |
Hgene | ILK | chr11:6629441 | chr9:104075080 | ENST00000420936 | + | 3 | 13 | 64_96 | 85.0 | 453.0 | Repeat | Note=ANK 3 |
Hgene | ILK | chr11:6629441 | chr9:104075080 | ENST00000420936 | + | 3 | 13 | 97_129 | 85.0 | 453.0 | Repeat | Note=ANK 4 |
Tgene | LPPR1 | chr11:6629441 | chr9:104075079 | ENST00000374874 | 4 | 8 | 127_147 | 212.0 | 326.0 | Transmembrane | Helical | |
Tgene | LPPR1 | chr11:6629441 | chr9:104075079 | ENST00000374874 | 4 | 8 | 13_33 | 212.0 | 326.0 | Transmembrane | Helical | |
Tgene | LPPR1 | chr11:6629441 | chr9:104075079 | ENST00000374874 | 4 | 8 | 201_218 | 212.0 | 326.0 | Transmembrane | Helical | |
Tgene | LPPR1 | chr11:6629441 | chr9:104075079 | ENST00000374874 | 4 | 8 | 67_87 | 212.0 | 326.0 | Transmembrane | Helical | |
Tgene | LPPR1 | chr11:6629441 | chr9:104075079 | ENST00000395056 | 4 | 8 | 127_147 | 212.0 | 326.0 | Transmembrane | Helical | |
Tgene | LPPR1 | chr11:6629441 | chr9:104075079 | ENST00000395056 | 4 | 8 | 13_33 | 212.0 | 326.0 | Transmembrane | Helical | |
Tgene | LPPR1 | chr11:6629441 | chr9:104075079 | ENST00000395056 | 4 | 8 | 201_218 | 212.0 | 326.0 | Transmembrane | Helical | |
Tgene | LPPR1 | chr11:6629441 | chr9:104075079 | ENST00000395056 | 4 | 8 | 67_87 | 212.0 | 326.0 | Transmembrane | Helical | |
Tgene | LPPR1 | chr11:6629441 | chr9:104075080 | ENST00000374874 | 4 | 8 | 127_147 | 212.0 | 326.0 | Transmembrane | Helical | |
Tgene | LPPR1 | chr11:6629441 | chr9:104075080 | ENST00000374874 | 4 | 8 | 13_33 | 212.0 | 326.0 | Transmembrane | Helical | |
Tgene | LPPR1 | chr11:6629441 | chr9:104075080 | ENST00000374874 | 4 | 8 | 201_218 | 212.0 | 326.0 | Transmembrane | Helical | |
Tgene | LPPR1 | chr11:6629441 | chr9:104075080 | ENST00000374874 | 4 | 8 | 67_87 | 212.0 | 326.0 | Transmembrane | Helical | |
Tgene | LPPR1 | chr11:6629441 | chr9:104075080 | ENST00000395056 | 4 | 8 | 127_147 | 212.0 | 326.0 | Transmembrane | Helical | |
Tgene | LPPR1 | chr11:6629441 | chr9:104075080 | ENST00000395056 | 4 | 8 | 13_33 | 212.0 | 326.0 | Transmembrane | Helical | |
Tgene | LPPR1 | chr11:6629441 | chr9:104075080 | ENST00000395056 | 4 | 8 | 201_218 | 212.0 | 326.0 | Transmembrane | Helical | |
Tgene | LPPR1 | chr11:6629441 | chr9:104075080 | ENST00000395056 | 4 | 8 | 67_87 | 212.0 | 326.0 | Transmembrane | Helical |
Top |
Fusion Gene Sequence for ILK-LPPR1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000299421_ENST00000374874_TCGA-24-1434_ILK_chr11_6629441_+_LPPR1_chr9_104075079_length(transcript)=1859nt_BP=439nt AAGAGCGCCACGGGCGGGGCGGGGCCGGCGGCGGGCTGCGGGCGCGGCCGGACGGGAGTTCCCCGGAGAAGGATCCTGCAGCCCGAGTCC CGAGGATAAAGCTTGGGGTTCATCCTCCTTCCCTGGATCACTCCACAGTCCTCAGGCTTCCCCAATCCAGGGGACTCGGCGCCGGGACGC TGCTATGGACGACATTTTCACTCAGTGCCGGGAGGGCAACGCAGTCGCCGTTCGCCTGTGGCTGGACAACACGGAGAACGACCTCAACCA GGGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCGAGAGGGCCGCTCTGCTGTGGTTGAGATGTTGATCATGCGGGGGGCACG GATCAATGTAATGAACCGTGGGGATGACACCCCCCTGCATCTGGCAGCCAGTCATGGACACCGTGATATTGTACAGAAGATGTATATTAC AAGCACAATCAAGACGAAGAGCAGTCGACTGGCCAAGCCGGTGCTGTGCCTCGGAACTCTCTGCACAGCCTTCCTGACAGGCCTCAACCG GGTCTCTGAGTATCGGAACCACTGCTCGGACGTGATTGCTGGTTTCATCCTGGGCACTGCAGTGGCCCTGTTTCTGGGAATGTGTGTGGT TCATAACTTTAAAGGAACGCAAGGATCTCCTTCCAAACCCAAGCCTGAGGATCCCCGTGGAGTACCCCTAATGGCTTTCCCAAGGATAGA AAGCCCTCTGGAAACCTTAAGTGCACAGAATCACTCTGCGTCCATGACCGAAGTTACCTGAGACGACTGATGTGTCACAAGCTGTTTTTT AAAATCATCTTCCAATTCTATACTTCAAAACACACAGTTGCTCAATGTCAAACTGTGATGACAAATATTACGTTTATCTAGTTAGAAGCT AATGTTTTGTACATTTTTTGTATGAGGAAGTGATGTAGCTTGCCCTGATTTTTTTTTTTTTTTTTTGGTCAGCTTTAATATATTTATGCC AGAATTTTAAAACCAACAAAATTTTCTTGTTCAAGCGTGCATTGAAGAACCACATTTATTCAATGGTTGACGTTGTTTTGTGATATTTGT ACACAAATTTTCTTTTCTCAGTTTTATAAACACAGAATATAACAATTCACTTTAAACTTTTATTACCACAGTTGCTGCCTCCTCCAGAAT TTTTGAATTTTAATAAAAGGCAAACTTTTGAGCTGCAGGAAGGACAATGTTGGTTAATAATAAATCTCAAAGTCAATTGTAGAAAAAAAA TTGTCTTCAAAAAGAATGTTGCACTCTGATCTCTTAACAAATTGTTACGTTCAAAGTTTAAAGTGATATATTAACAAAGTCACCTAGTTA TACAAACAATTGTCAGAGAATTCTGGATTTGGAGGGTATTGGGGTTATATGATTCTTTCTTAGATAATGGCCTCTACTAAATAACTCAAG ATCTTTCTGGAATGTCTTCTGGCAGGCAGGTGCCACTGTCAGCTTTTCTCCAAAAAGCAGCCAACATCAGCCTCCCCTGTCAACTCAACA GTTTTGTATCTCATATTATATGGACTTTATATGAAAATGAATATTTTACAGTTTGCACAGTATTATTTTACAGAAAAGGAATCAGAGAAT CTACAACATAGGGCCCCAGAACAACAGTTTCACTTTGTGGCTTTTAATTATTCTAGAATTTTAACTGCATCTCATTTTTCTAGCATGGTG AGAACTAATATGTAACTCCTTTGATTGAAGGAGCTCTTTTGTCCGTACCTATCAGAATGTTTTCTTGACACTTCCATGTTGGCTCTTCTC >In-frame_ENST00000299421_ENST00000374874_TCGA-24-1434_ILK_chr11_6629441_+_LPPR1_chr9_104075079_length(amino acids)=198AA_start in transcript=184_stop in transcript=780 MDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKMYITS TIKTKSSRLAKPVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSPSKPKPEDPRGVPLMAFPRIES -------------------------------------------------------------- >In-frame_ENST00000299421_ENST00000395056_TCGA-24-1434_ILK_chr11_6629441_+_LPPR1_chr9_104075079_length(transcript)=1855nt_BP=439nt AAGAGCGCCACGGGCGGGGCGGGGCCGGCGGCGGGCTGCGGGCGCGGCCGGACGGGAGTTCCCCGGAGAAGGATCCTGCAGCCCGAGTCC CGAGGATAAAGCTTGGGGTTCATCCTCCTTCCCTGGATCACTCCACAGTCCTCAGGCTTCCCCAATCCAGGGGACTCGGCGCCGGGACGC TGCTATGGACGACATTTTCACTCAGTGCCGGGAGGGCAACGCAGTCGCCGTTCGCCTGTGGCTGGACAACACGGAGAACGACCTCAACCA GGGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCGAGAGGGCCGCTCTGCTGTGGTTGAGATGTTGATCATGCGGGGGGCACG GATCAATGTAATGAACCGTGGGGATGACACCCCCCTGCATCTGGCAGCCAGTCATGGACACCGTGATATTGTACAGAAGATGTATATTAC AAGCACAATCAAGACGAAGAGCAGTCGACTGGCCAAGCCGGTGCTGTGCCTCGGAACTCTCTGCACAGCCTTCCTGACAGGCCTCAACCG GGTCTCTGAGTATCGGAACCACTGCTCGGACGTGATTGCTGGTTTCATCCTGGGCACTGCAGTGGCCCTGTTTCTGGGAATGTGTGTGGT TCATAACTTTAAAGGAACGCAAGGATCTCCTTCCAAACCCAAGCCTGAGGATCCCCGTGGAGTACCCCTAATGGCTTTCCCAAGGATAGA AAGCCCTCTGGAAACCTTAAGTGCACAGAATCACTCTGCGTCCATGACCGAAGTTACCTGAGACGACTGATGTGTCACAAGCTGTTTTTT AAAATCATCTTCCAATTCTATACTTCAAAACACACAGTTGCTCAATGTCAAACTGTGATGACAAATATTACGTTTATCTAGTTAGAAGCT AATGTTTTGTACATTTTTTGTATGAGGAAGTGATGTAGCTTGCCCTGATTTTTTTTTTTTTTTTTTGGTCAGCTTTAATATATTTATGCC AGAATTTTAAAACCAACAAAATTTTCTTGTTCAAGCGTGCATTGAAGAACCACATTTATTCAATGGTTGACGTTGTTTTGTGATATTTGT ACACAAATTTTCTTTTCTCAGTTTTATAAACACAGAATATAACAATTCACTTTAAACTTTTATTACCACAGTTGCTGCCTCCTCCAGAAT TTTTGAATTTTAATAAAAGGCAAACTTTTGAGCTGCAGGAAGGACAATGTTGGTTAATAATAAATCTCAAAGTCAATTGTAGAAAAAAAA TTGTCTTCAAAAAGAATGTTGCACTCTGATCTCTTAACAAATTGTTACGTTCAAAGTTTAAAGTGATATATTAACAAAGTCACCTAGTTA TACAAACAATTGTCAGAGAATTCTGGATTTGGAGGGTATTGGGGTTATATGATTCTTTCTTAGATAATGGCCTCTACTAAATAACTCAAG ATCTTTCTGGAATGTCTTCTGGCAGGCAGGTGCCACTGTCAGCTTTTCTCCAAAAAGCAGCCAACATCAGCCTCCCCTGTCAACTCAACA GTTTTGTATCTCATATTATATGGACTTTATATGAAAATGAATATTTTACAGTTTGCACAGTATTATTTTACAGAAAAGGAATCAGAGAAT CTACAACATAGGGCCCCAGAACAACAGTTTCACTTTGTGGCTTTTAATTATTCTAGAATTTTAACTGCATCTCATTTTTCTAGCATGGTG AGAACTAATATGTAACTCCTTTGATTGAAGGAGCTCTTTTGTCCGTACCTATCAGAATGTTTTCTTGACACTTCCATGTTGGCTCTTCTC >In-frame_ENST00000299421_ENST00000395056_TCGA-24-1434_ILK_chr11_6629441_+_LPPR1_chr9_104075079_length(amino acids)=198AA_start in transcript=184_stop in transcript=780 MDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKMYITS TIKTKSSRLAKPVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSPSKPKPEDPRGVPLMAFPRIES -------------------------------------------------------------- >In-frame_ENST00000420936_ENST00000374874_TCGA-24-1434_ILK_chr11_6629441_+_LPPR1_chr9_104075079_length(transcript)=1786nt_BP=366nt GCGGCGGGCTGCGGGCGCGGCCGGACGGGAGTTCCCCGGAGAAGGATCCTGCAGCCCGAGTCCCGTCCTCAGGCTTCCCCAATCCAGGGG ACTCGGCGCCGGGACGCTGCTATGGACGACATTTTCACTCAGTGCCGGGAGGGCAACGCAGTCGCCGTTCGCCTGTGGCTGGACAACACG GAGAACGACCTCAACCAGGGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCGAGAGGGCCGCTCTGCTGTGGTTGAGATGTTG ATCATGCGGGGGGCACGGATCAATGTAATGAACCGTGGGGATGACACCCCCCTGCATCTGGCAGCCAGTCATGGACACCGTGATATTGTA CAGAAGATGTATATTACAAGCACAATCAAGACGAAGAGCAGTCGACTGGCCAAGCCGGTGCTGTGCCTCGGAACTCTCTGCACAGCCTTC CTGACAGGCCTCAACCGGGTCTCTGAGTATCGGAACCACTGCTCGGACGTGATTGCTGGTTTCATCCTGGGCACTGCAGTGGCCCTGTTT CTGGGAATGTGTGTGGTTCATAACTTTAAAGGAACGCAAGGATCTCCTTCCAAACCCAAGCCTGAGGATCCCCGTGGAGTACCCCTAATG GCTTTCCCAAGGATAGAAAGCCCTCTGGAAACCTTAAGTGCACAGAATCACTCTGCGTCCATGACCGAAGTTACCTGAGACGACTGATGT GTCACAAGCTGTTTTTTAAAATCATCTTCCAATTCTATACTTCAAAACACACAGTTGCTCAATGTCAAACTGTGATGACAAATATTACGT TTATCTAGTTAGAAGCTAATGTTTTGTACATTTTTTGTATGAGGAAGTGATGTAGCTTGCCCTGATTTTTTTTTTTTTTTTTTGGTCAGC TTTAATATATTTATGCCAGAATTTTAAAACCAACAAAATTTTCTTGTTCAAGCGTGCATTGAAGAACCACATTTATTCAATGGTTGACGT TGTTTTGTGATATTTGTACACAAATTTTCTTTTCTCAGTTTTATAAACACAGAATATAACAATTCACTTTAAACTTTTATTACCACAGTT GCTGCCTCCTCCAGAATTTTTGAATTTTAATAAAAGGCAAACTTTTGAGCTGCAGGAAGGACAATGTTGGTTAATAATAAATCTCAAAGT CAATTGTAGAAAAAAAATTGTCTTCAAAAAGAATGTTGCACTCTGATCTCTTAACAAATTGTTACGTTCAAAGTTTAAAGTGATATATTA ACAAAGTCACCTAGTTATACAAACAATTGTCAGAGAATTCTGGATTTGGAGGGTATTGGGGTTATATGATTCTTTCTTAGATAATGGCCT CTACTAAATAACTCAAGATCTTTCTGGAATGTCTTCTGGCAGGCAGGTGCCACTGTCAGCTTTTCTCCAAAAAGCAGCCAACATCAGCCT CCCCTGTCAACTCAACAGTTTTGTATCTCATATTATATGGACTTTATATGAAAATGAATATTTTACAGTTTGCACAGTATTATTTTACAG AAAAGGAATCAGAGAATCTACAACATAGGGCCCCAGAACAACAGTTTCACTTTGTGGCTTTTAATTATTCTAGAATTTTAACTGCATCTC ATTTTTCTAGCATGGTGAGAACTAATATGTAACTCCTTTGATTGAAGGAGCTCTTTTGTCCGTACCTATCAGAATGTTTTCTTGACACTT >In-frame_ENST00000420936_ENST00000374874_TCGA-24-1434_ILK_chr11_6629441_+_LPPR1_chr9_104075079_length(amino acids)=219AA_start in transcript=48_stop in transcript=707 MQPESRPQASPIQGTRRRDAAMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDT PLHLAASHGHRDIVQKMYITSTIKTKSSRLAKPVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSP -------------------------------------------------------------- >In-frame_ENST00000420936_ENST00000395056_TCGA-24-1434_ILK_chr11_6629441_+_LPPR1_chr9_104075079_length(transcript)=1782nt_BP=366nt GCGGCGGGCTGCGGGCGCGGCCGGACGGGAGTTCCCCGGAGAAGGATCCTGCAGCCCGAGTCCCGTCCTCAGGCTTCCCCAATCCAGGGG ACTCGGCGCCGGGACGCTGCTATGGACGACATTTTCACTCAGTGCCGGGAGGGCAACGCAGTCGCCGTTCGCCTGTGGCTGGACAACACG GAGAACGACCTCAACCAGGGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCGAGAGGGCCGCTCTGCTGTGGTTGAGATGTTG ATCATGCGGGGGGCACGGATCAATGTAATGAACCGTGGGGATGACACCCCCCTGCATCTGGCAGCCAGTCATGGACACCGTGATATTGTA CAGAAGATGTATATTACAAGCACAATCAAGACGAAGAGCAGTCGACTGGCCAAGCCGGTGCTGTGCCTCGGAACTCTCTGCACAGCCTTC CTGACAGGCCTCAACCGGGTCTCTGAGTATCGGAACCACTGCTCGGACGTGATTGCTGGTTTCATCCTGGGCACTGCAGTGGCCCTGTTT CTGGGAATGTGTGTGGTTCATAACTTTAAAGGAACGCAAGGATCTCCTTCCAAACCCAAGCCTGAGGATCCCCGTGGAGTACCCCTAATG GCTTTCCCAAGGATAGAAAGCCCTCTGGAAACCTTAAGTGCACAGAATCACTCTGCGTCCATGACCGAAGTTACCTGAGACGACTGATGT GTCACAAGCTGTTTTTTAAAATCATCTTCCAATTCTATACTTCAAAACACACAGTTGCTCAATGTCAAACTGTGATGACAAATATTACGT TTATCTAGTTAGAAGCTAATGTTTTGTACATTTTTTGTATGAGGAAGTGATGTAGCTTGCCCTGATTTTTTTTTTTTTTTTTTGGTCAGC TTTAATATATTTATGCCAGAATTTTAAAACCAACAAAATTTTCTTGTTCAAGCGTGCATTGAAGAACCACATTTATTCAATGGTTGACGT TGTTTTGTGATATTTGTACACAAATTTTCTTTTCTCAGTTTTATAAACACAGAATATAACAATTCACTTTAAACTTTTATTACCACAGTT GCTGCCTCCTCCAGAATTTTTGAATTTTAATAAAAGGCAAACTTTTGAGCTGCAGGAAGGACAATGTTGGTTAATAATAAATCTCAAAGT CAATTGTAGAAAAAAAATTGTCTTCAAAAAGAATGTTGCACTCTGATCTCTTAACAAATTGTTACGTTCAAAGTTTAAAGTGATATATTA ACAAAGTCACCTAGTTATACAAACAATTGTCAGAGAATTCTGGATTTGGAGGGTATTGGGGTTATATGATTCTTTCTTAGATAATGGCCT CTACTAAATAACTCAAGATCTTTCTGGAATGTCTTCTGGCAGGCAGGTGCCACTGTCAGCTTTTCTCCAAAAAGCAGCCAACATCAGCCT CCCCTGTCAACTCAACAGTTTTGTATCTCATATTATATGGACTTTATATGAAAATGAATATTTTACAGTTTGCACAGTATTATTTTACAG AAAAGGAATCAGAGAATCTACAACATAGGGCCCCAGAACAACAGTTTCACTTTGTGGCTTTTAATTATTCTAGAATTTTAACTGCATCTC ATTTTTCTAGCATGGTGAGAACTAATATGTAACTCCTTTGATTGAAGGAGCTCTTTTGTCCGTACCTATCAGAATGTTTTCTTGACACTT >In-frame_ENST00000420936_ENST00000395056_TCGA-24-1434_ILK_chr11_6629441_+_LPPR1_chr9_104075079_length(amino acids)=219AA_start in transcript=48_stop in transcript=707 MQPESRPQASPIQGTRRRDAAMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDT PLHLAASHGHRDIVQKMYITSTIKTKSSRLAKPVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSP -------------------------------------------------------------- >In-frame_ENST00000528995_ENST00000374874_TCGA-24-1434_ILK_chr11_6629441_+_LPPR1_chr9_104075079_length(transcript)=1803nt_BP=383nt AGTTCCCCGGAGAAGGATCCTGCAGCCCGAGTCCCGAGGATAAAGCTTGGGGTTCATCCTCCTTCCCTGGATCACTCCACAGTCCTCAGG CTTCCCCAATCCAGGGGACTCGGCGCCGGGACGCTGCTATGGACGACATTTTCACTCAGTGCCGGGAGGGCAACGCAGTCGCCGTTCGCC TGTGGCTGGACAACACGGAGAACGACCTCAACCAGGGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCGAGAGGGCCGCTCTG CTGTGGTTGAGATGTTGATCATGCGGGGGGCACGGATCAATGTAATGAACCGTGGGGATGACACCCCCCTGCATCTGGCAGCCAGTCATG GACACCGTGATATTGTACAGAAGATGTATATTACAAGCACAATCAAGACGAAGAGCAGTCGACTGGCCAAGCCGGTGCTGTGCCTCGGAA CTCTCTGCACAGCCTTCCTGACAGGCCTCAACCGGGTCTCTGAGTATCGGAACCACTGCTCGGACGTGATTGCTGGTTTCATCCTGGGCA CTGCAGTGGCCCTGTTTCTGGGAATGTGTGTGGTTCATAACTTTAAAGGAACGCAAGGATCTCCTTCCAAACCCAAGCCTGAGGATCCCC GTGGAGTACCCCTAATGGCTTTCCCAAGGATAGAAAGCCCTCTGGAAACCTTAAGTGCACAGAATCACTCTGCGTCCATGACCGAAGTTA CCTGAGACGACTGATGTGTCACAAGCTGTTTTTTAAAATCATCTTCCAATTCTATACTTCAAAACACACAGTTGCTCAATGTCAAACTGT GATGACAAATATTACGTTTATCTAGTTAGAAGCTAATGTTTTGTACATTTTTTGTATGAGGAAGTGATGTAGCTTGCCCTGATTTTTTTT TTTTTTTTTTGGTCAGCTTTAATATATTTATGCCAGAATTTTAAAACCAACAAAATTTTCTTGTTCAAGCGTGCATTGAAGAACCACATT TATTCAATGGTTGACGTTGTTTTGTGATATTTGTACACAAATTTTCTTTTCTCAGTTTTATAAACACAGAATATAACAATTCACTTTAAA CTTTTATTACCACAGTTGCTGCCTCCTCCAGAATTTTTGAATTTTAATAAAAGGCAAACTTTTGAGCTGCAGGAAGGACAATGTTGGTTA ATAATAAATCTCAAAGTCAATTGTAGAAAAAAAATTGTCTTCAAAAAGAATGTTGCACTCTGATCTCTTAACAAATTGTTACGTTCAAAG TTTAAAGTGATATATTAACAAAGTCACCTAGTTATACAAACAATTGTCAGAGAATTCTGGATTTGGAGGGTATTGGGGTTATATGATTCT TTCTTAGATAATGGCCTCTACTAAATAACTCAAGATCTTTCTGGAATGTCTTCTGGCAGGCAGGTGCCACTGTCAGCTTTTCTCCAAAAA GCAGCCAACATCAGCCTCCCCTGTCAACTCAACAGTTTTGTATCTCATATTATATGGACTTTATATGAAAATGAATATTTTACAGTTTGC ACAGTATTATTTTACAGAAAAGGAATCAGAGAATCTACAACATAGGGCCCCAGAACAACAGTTTCACTTTGTGGCTTTTAATTATTCTAG AATTTTAACTGCATCTCATTTTTCTAGCATGGTGAGAACTAATATGTAACTCCTTTGATTGAAGGAGCTCTTTTGTCCGTACCTATCAGA ATGTTTTCTTGACACTTCCATGTTGGCTCTTCTCAGCTTTTTTTGTACATATTTTTTTTTTCTAAAGAGAAGAAAAAGTTATCACAAAAT >In-frame_ENST00000528995_ENST00000374874_TCGA-24-1434_ILK_chr11_6629441_+_LPPR1_chr9_104075079_length(amino acids)=198AA_start in transcript=128_stop in transcript=724 MDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKMYITS TIKTKSSRLAKPVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSPSKPKPEDPRGVPLMAFPRIES -------------------------------------------------------------- >In-frame_ENST00000528995_ENST00000395056_TCGA-24-1434_ILK_chr11_6629441_+_LPPR1_chr9_104075079_length(transcript)=1799nt_BP=383nt AGTTCCCCGGAGAAGGATCCTGCAGCCCGAGTCCCGAGGATAAAGCTTGGGGTTCATCCTCCTTCCCTGGATCACTCCACAGTCCTCAGG CTTCCCCAATCCAGGGGACTCGGCGCCGGGACGCTGCTATGGACGACATTTTCACTCAGTGCCGGGAGGGCAACGCAGTCGCCGTTCGCC TGTGGCTGGACAACACGGAGAACGACCTCAACCAGGGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCGAGAGGGCCGCTCTG CTGTGGTTGAGATGTTGATCATGCGGGGGGCACGGATCAATGTAATGAACCGTGGGGATGACACCCCCCTGCATCTGGCAGCCAGTCATG GACACCGTGATATTGTACAGAAGATGTATATTACAAGCACAATCAAGACGAAGAGCAGTCGACTGGCCAAGCCGGTGCTGTGCCTCGGAA CTCTCTGCACAGCCTTCCTGACAGGCCTCAACCGGGTCTCTGAGTATCGGAACCACTGCTCGGACGTGATTGCTGGTTTCATCCTGGGCA CTGCAGTGGCCCTGTTTCTGGGAATGTGTGTGGTTCATAACTTTAAAGGAACGCAAGGATCTCCTTCCAAACCCAAGCCTGAGGATCCCC GTGGAGTACCCCTAATGGCTTTCCCAAGGATAGAAAGCCCTCTGGAAACCTTAAGTGCACAGAATCACTCTGCGTCCATGACCGAAGTTA CCTGAGACGACTGATGTGTCACAAGCTGTTTTTTAAAATCATCTTCCAATTCTATACTTCAAAACACACAGTTGCTCAATGTCAAACTGT GATGACAAATATTACGTTTATCTAGTTAGAAGCTAATGTTTTGTACATTTTTTGTATGAGGAAGTGATGTAGCTTGCCCTGATTTTTTTT TTTTTTTTTTGGTCAGCTTTAATATATTTATGCCAGAATTTTAAAACCAACAAAATTTTCTTGTTCAAGCGTGCATTGAAGAACCACATT TATTCAATGGTTGACGTTGTTTTGTGATATTTGTACACAAATTTTCTTTTCTCAGTTTTATAAACACAGAATATAACAATTCACTTTAAA CTTTTATTACCACAGTTGCTGCCTCCTCCAGAATTTTTGAATTTTAATAAAAGGCAAACTTTTGAGCTGCAGGAAGGACAATGTTGGTTA ATAATAAATCTCAAAGTCAATTGTAGAAAAAAAATTGTCTTCAAAAAGAATGTTGCACTCTGATCTCTTAACAAATTGTTACGTTCAAAG TTTAAAGTGATATATTAACAAAGTCACCTAGTTATACAAACAATTGTCAGAGAATTCTGGATTTGGAGGGTATTGGGGTTATATGATTCT TTCTTAGATAATGGCCTCTACTAAATAACTCAAGATCTTTCTGGAATGTCTTCTGGCAGGCAGGTGCCACTGTCAGCTTTTCTCCAAAAA GCAGCCAACATCAGCCTCCCCTGTCAACTCAACAGTTTTGTATCTCATATTATATGGACTTTATATGAAAATGAATATTTTACAGTTTGC ACAGTATTATTTTACAGAAAAGGAATCAGAGAATCTACAACATAGGGCCCCAGAACAACAGTTTCACTTTGTGGCTTTTAATTATTCTAG AATTTTAACTGCATCTCATTTTTCTAGCATGGTGAGAACTAATATGTAACTCCTTTGATTGAAGGAGCTCTTTTGTCCGTACCTATCAGA >In-frame_ENST00000528995_ENST00000395056_TCGA-24-1434_ILK_chr11_6629441_+_LPPR1_chr9_104075079_length(amino acids)=198AA_start in transcript=128_stop in transcript=724 MDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKMYITS TIKTKSSRLAKPVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSPSKPKPEDPRGVPLMAFPRIES -------------------------------------------------------------- >In-frame_ENST00000396751_ENST00000374874_TCGA-24-1434_ILK_chr11_6629441_+_LPPR1_chr9_104075079_length(transcript)=2131nt_BP=711nt AGTCCCGGTGAGTGCGAGAGGACCCGCGCCCCCTGTCACCCCTCACTTCTCCTGAGTCCCAAGTAAGGAACGGAGCCAACCCTGGGGAGG ACCCCCGGTCCCCTCTCCCAGAGTATACGGAGCCTGAACCTCCCCACTTCCCCCAACTCTGTTCGCGGATAGGGTCTAGTTGCCTGCTCT CGGACATCCGTTCAGCAGACACTACCTCTTCGTCACCCCCTGCCCACCCTGACCCGCCTTTACCTCGCGTCTAGAGGACACAGCCAGGGA TCATCCCGCAGCCCCGAACTCCTTCACAGACCCCCACTAGCCGGGGACGCAGCTCAGGCCCCCTACCCCCAACACAAACACTTCTCTCCT GTAGAGGATAAAGCTTGGGGTTCATCCTCCTTCCCTGGATCACTCCACAGTCCTCAGGCTTCCCCAATCCAGGGGACTCGGCGCCGGGAC GCTGCTATGGACGACATTTTCACTCAGTGCCGGGAGGGCAACGCAGTCGCCGTTCGCCTGTGGCTGGACAACACGGAGAACGACCTCAAC CAGGGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCGAGAGGGCCGCTCTGCTGTGGTTGAGATGTTGATCATGCGGGGGGCA CGGATCAATGTAATGAACCGTGGGGATGACACCCCCCTGCATCTGGCAGCCAGTCATGGACACCGTGATATTGTACAGAAGATGTATATT ACAAGCACAATCAAGACGAAGAGCAGTCGACTGGCCAAGCCGGTGCTGTGCCTCGGAACTCTCTGCACAGCCTTCCTGACAGGCCTCAAC CGGGTCTCTGAGTATCGGAACCACTGCTCGGACGTGATTGCTGGTTTCATCCTGGGCACTGCAGTGGCCCTGTTTCTGGGAATGTGTGTG GTTCATAACTTTAAAGGAACGCAAGGATCTCCTTCCAAACCCAAGCCTGAGGATCCCCGTGGAGTACCCCTAATGGCTTTCCCAAGGATA GAAAGCCCTCTGGAAACCTTAAGTGCACAGAATCACTCTGCGTCCATGACCGAAGTTACCTGAGACGACTGATGTGTCACAAGCTGTTTT TTAAAATCATCTTCCAATTCTATACTTCAAAACACACAGTTGCTCAATGTCAAACTGTGATGACAAATATTACGTTTATCTAGTTAGAAG CTAATGTTTTGTACATTTTTTGTATGAGGAAGTGATGTAGCTTGCCCTGATTTTTTTTTTTTTTTTTTGGTCAGCTTTAATATATTTATG CCAGAATTTTAAAACCAACAAAATTTTCTTGTTCAAGCGTGCATTGAAGAACCACATTTATTCAATGGTTGACGTTGTTTTGTGATATTT GTACACAAATTTTCTTTTCTCAGTTTTATAAACACAGAATATAACAATTCACTTTAAACTTTTATTACCACAGTTGCTGCCTCCTCCAGA ATTTTTGAATTTTAATAAAAGGCAAACTTTTGAGCTGCAGGAAGGACAATGTTGGTTAATAATAAATCTCAAAGTCAATTGTAGAAAAAA AATTGTCTTCAAAAAGAATGTTGCACTCTGATCTCTTAACAAATTGTTACGTTCAAAGTTTAAAGTGATATATTAACAAAGTCACCTAGT TATACAAACAATTGTCAGAGAATTCTGGATTTGGAGGGTATTGGGGTTATATGATTCTTTCTTAGATAATGGCCTCTACTAAATAACTCA AGATCTTTCTGGAATGTCTTCTGGCAGGCAGGTGCCACTGTCAGCTTTTCTCCAAAAAGCAGCCAACATCAGCCTCCCCTGTCAACTCAA CAGTTTTGTATCTCATATTATATGGACTTTATATGAAAATGAATATTTTACAGTTTGCACAGTATTATTTTACAGAAAAGGAATCAGAGA ATCTACAACATAGGGCCCCAGAACAACAGTTTCACTTTGTGGCTTTTAATTATTCTAGAATTTTAACTGCATCTCATTTTTCTAGCATGG TGAGAACTAATATGTAACTCCTTTGATTGAAGGAGCTCTTTTGTCCGTACCTATCAGAATGTTTTCTTGACACTTCCATGTTGGCTCTTC >In-frame_ENST00000396751_ENST00000374874_TCGA-24-1434_ILK_chr11_6629441_+_LPPR1_chr9_104075079_length(amino acids)=277AA_start in transcript=219_stop in transcript=1052 MPTLTRLYLASRGHSQGSSRSPELLHRPPLAGDAAQAPYPQHKHFSPVEDKAWGSSSFPGSLHSPQASPIQGTRRRDAAMDDIFTQCREG NAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKMYITSTIKTKSSRLAK PVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSPSKPKPEDPRGVPLMAFPRIESPLETLSAQNHS -------------------------------------------------------------- >In-frame_ENST00000396751_ENST00000395056_TCGA-24-1434_ILK_chr11_6629441_+_LPPR1_chr9_104075079_length(transcript)=2127nt_BP=711nt AGTCCCGGTGAGTGCGAGAGGACCCGCGCCCCCTGTCACCCCTCACTTCTCCTGAGTCCCAAGTAAGGAACGGAGCCAACCCTGGGGAGG ACCCCCGGTCCCCTCTCCCAGAGTATACGGAGCCTGAACCTCCCCACTTCCCCCAACTCTGTTCGCGGATAGGGTCTAGTTGCCTGCTCT CGGACATCCGTTCAGCAGACACTACCTCTTCGTCACCCCCTGCCCACCCTGACCCGCCTTTACCTCGCGTCTAGAGGACACAGCCAGGGA TCATCCCGCAGCCCCGAACTCCTTCACAGACCCCCACTAGCCGGGGACGCAGCTCAGGCCCCCTACCCCCAACACAAACACTTCTCTCCT GTAGAGGATAAAGCTTGGGGTTCATCCTCCTTCCCTGGATCACTCCACAGTCCTCAGGCTTCCCCAATCCAGGGGACTCGGCGCCGGGAC GCTGCTATGGACGACATTTTCACTCAGTGCCGGGAGGGCAACGCAGTCGCCGTTCGCCTGTGGCTGGACAACACGGAGAACGACCTCAAC CAGGGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCGAGAGGGCCGCTCTGCTGTGGTTGAGATGTTGATCATGCGGGGGGCA CGGATCAATGTAATGAACCGTGGGGATGACACCCCCCTGCATCTGGCAGCCAGTCATGGACACCGTGATATTGTACAGAAGATGTATATT ACAAGCACAATCAAGACGAAGAGCAGTCGACTGGCCAAGCCGGTGCTGTGCCTCGGAACTCTCTGCACAGCCTTCCTGACAGGCCTCAAC CGGGTCTCTGAGTATCGGAACCACTGCTCGGACGTGATTGCTGGTTTCATCCTGGGCACTGCAGTGGCCCTGTTTCTGGGAATGTGTGTG GTTCATAACTTTAAAGGAACGCAAGGATCTCCTTCCAAACCCAAGCCTGAGGATCCCCGTGGAGTACCCCTAATGGCTTTCCCAAGGATA GAAAGCCCTCTGGAAACCTTAAGTGCACAGAATCACTCTGCGTCCATGACCGAAGTTACCTGAGACGACTGATGTGTCACAAGCTGTTTT TTAAAATCATCTTCCAATTCTATACTTCAAAACACACAGTTGCTCAATGTCAAACTGTGATGACAAATATTACGTTTATCTAGTTAGAAG CTAATGTTTTGTACATTTTTTGTATGAGGAAGTGATGTAGCTTGCCCTGATTTTTTTTTTTTTTTTTTGGTCAGCTTTAATATATTTATG CCAGAATTTTAAAACCAACAAAATTTTCTTGTTCAAGCGTGCATTGAAGAACCACATTTATTCAATGGTTGACGTTGTTTTGTGATATTT GTACACAAATTTTCTTTTCTCAGTTTTATAAACACAGAATATAACAATTCACTTTAAACTTTTATTACCACAGTTGCTGCCTCCTCCAGA ATTTTTGAATTTTAATAAAAGGCAAACTTTTGAGCTGCAGGAAGGACAATGTTGGTTAATAATAAATCTCAAAGTCAATTGTAGAAAAAA AATTGTCTTCAAAAAGAATGTTGCACTCTGATCTCTTAACAAATTGTTACGTTCAAAGTTTAAAGTGATATATTAACAAAGTCACCTAGT TATACAAACAATTGTCAGAGAATTCTGGATTTGGAGGGTATTGGGGTTATATGATTCTTTCTTAGATAATGGCCTCTACTAAATAACTCA AGATCTTTCTGGAATGTCTTCTGGCAGGCAGGTGCCACTGTCAGCTTTTCTCCAAAAAGCAGCCAACATCAGCCTCCCCTGTCAACTCAA CAGTTTTGTATCTCATATTATATGGACTTTATATGAAAATGAATATTTTACAGTTTGCACAGTATTATTTTACAGAAAAGGAATCAGAGA ATCTACAACATAGGGCCCCAGAACAACAGTTTCACTTTGTGGCTTTTAATTATTCTAGAATTTTAACTGCATCTCATTTTTCTAGCATGG TGAGAACTAATATGTAACTCCTTTGATTGAAGGAGCTCTTTTGTCCGTACCTATCAGAATGTTTTCTTGACACTTCCATGTTGGCTCTTC >In-frame_ENST00000396751_ENST00000395056_TCGA-24-1434_ILK_chr11_6629441_+_LPPR1_chr9_104075079_length(amino acids)=277AA_start in transcript=219_stop in transcript=1052 MPTLTRLYLASRGHSQGSSRSPELLHRPPLAGDAAQAPYPQHKHFSPVEDKAWGSSSFPGSLHSPQASPIQGTRRRDAAMDDIFTQCREG NAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKMYITSTIKTKSSRLAK PVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSPSKPKPEDPRGVPLMAFPRIESPLETLSAQNHS -------------------------------------------------------------- >In-frame_ENST00000299421_ENST00000374874_TCGA-24-1434-01A_ILK_chr11_6629441_+_LPPR1_chr9_104075080_length(transcript)=1859nt_BP=439nt AAGAGCGCCACGGGCGGGGCGGGGCCGGCGGCGGGCTGCGGGCGCGGCCGGACGGGAGTTCCCCGGAGAAGGATCCTGCAGCCCGAGTCC CGAGGATAAAGCTTGGGGTTCATCCTCCTTCCCTGGATCACTCCACAGTCCTCAGGCTTCCCCAATCCAGGGGACTCGGCGCCGGGACGC TGCTATGGACGACATTTTCACTCAGTGCCGGGAGGGCAACGCAGTCGCCGTTCGCCTGTGGCTGGACAACACGGAGAACGACCTCAACCA GGGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCGAGAGGGCCGCTCTGCTGTGGTTGAGATGTTGATCATGCGGGGGGCACG GATCAATGTAATGAACCGTGGGGATGACACCCCCCTGCATCTGGCAGCCAGTCATGGACACCGTGATATTGTACAGAAGATGTATATTAC AAGCACAATCAAGACGAAGAGCAGTCGACTGGCCAAGCCGGTGCTGTGCCTCGGAACTCTCTGCACAGCCTTCCTGACAGGCCTCAACCG GGTCTCTGAGTATCGGAACCACTGCTCGGACGTGATTGCTGGTTTCATCCTGGGCACTGCAGTGGCCCTGTTTCTGGGAATGTGTGTGGT TCATAACTTTAAAGGAACGCAAGGATCTCCTTCCAAACCCAAGCCTGAGGATCCCCGTGGAGTACCCCTAATGGCTTTCCCAAGGATAGA AAGCCCTCTGGAAACCTTAAGTGCACAGAATCACTCTGCGTCCATGACCGAAGTTACCTGAGACGACTGATGTGTCACAAGCTGTTTTTT AAAATCATCTTCCAATTCTATACTTCAAAACACACAGTTGCTCAATGTCAAACTGTGATGACAAATATTACGTTTATCTAGTTAGAAGCT AATGTTTTGTACATTTTTTGTATGAGGAAGTGATGTAGCTTGCCCTGATTTTTTTTTTTTTTTTTTGGTCAGCTTTAATATATTTATGCC AGAATTTTAAAACCAACAAAATTTTCTTGTTCAAGCGTGCATTGAAGAACCACATTTATTCAATGGTTGACGTTGTTTTGTGATATTTGT ACACAAATTTTCTTTTCTCAGTTTTATAAACACAGAATATAACAATTCACTTTAAACTTTTATTACCACAGTTGCTGCCTCCTCCAGAAT TTTTGAATTTTAATAAAAGGCAAACTTTTGAGCTGCAGGAAGGACAATGTTGGTTAATAATAAATCTCAAAGTCAATTGTAGAAAAAAAA TTGTCTTCAAAAAGAATGTTGCACTCTGATCTCTTAACAAATTGTTACGTTCAAAGTTTAAAGTGATATATTAACAAAGTCACCTAGTTA TACAAACAATTGTCAGAGAATTCTGGATTTGGAGGGTATTGGGGTTATATGATTCTTTCTTAGATAATGGCCTCTACTAAATAACTCAAG ATCTTTCTGGAATGTCTTCTGGCAGGCAGGTGCCACTGTCAGCTTTTCTCCAAAAAGCAGCCAACATCAGCCTCCCCTGTCAACTCAACA GTTTTGTATCTCATATTATATGGACTTTATATGAAAATGAATATTTTACAGTTTGCACAGTATTATTTTACAGAAAAGGAATCAGAGAAT CTACAACATAGGGCCCCAGAACAACAGTTTCACTTTGTGGCTTTTAATTATTCTAGAATTTTAACTGCATCTCATTTTTCTAGCATGGTG AGAACTAATATGTAACTCCTTTGATTGAAGGAGCTCTTTTGTCCGTACCTATCAGAATGTTTTCTTGACACTTCCATGTTGGCTCTTCTC >In-frame_ENST00000299421_ENST00000374874_TCGA-24-1434-01A_ILK_chr11_6629441_+_LPPR1_chr9_104075080_length(amino acids)=198AA_start in transcript=184_stop in transcript=780 MDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKMYITS TIKTKSSRLAKPVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSPSKPKPEDPRGVPLMAFPRIES -------------------------------------------------------------- >In-frame_ENST00000299421_ENST00000395056_TCGA-24-1434-01A_ILK_chr11_6629441_+_LPPR1_chr9_104075080_length(transcript)=1855nt_BP=439nt AAGAGCGCCACGGGCGGGGCGGGGCCGGCGGCGGGCTGCGGGCGCGGCCGGACGGGAGTTCCCCGGAGAAGGATCCTGCAGCCCGAGTCC CGAGGATAAAGCTTGGGGTTCATCCTCCTTCCCTGGATCACTCCACAGTCCTCAGGCTTCCCCAATCCAGGGGACTCGGCGCCGGGACGC TGCTATGGACGACATTTTCACTCAGTGCCGGGAGGGCAACGCAGTCGCCGTTCGCCTGTGGCTGGACAACACGGAGAACGACCTCAACCA GGGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCGAGAGGGCCGCTCTGCTGTGGTTGAGATGTTGATCATGCGGGGGGCACG GATCAATGTAATGAACCGTGGGGATGACACCCCCCTGCATCTGGCAGCCAGTCATGGACACCGTGATATTGTACAGAAGATGTATATTAC AAGCACAATCAAGACGAAGAGCAGTCGACTGGCCAAGCCGGTGCTGTGCCTCGGAACTCTCTGCACAGCCTTCCTGACAGGCCTCAACCG GGTCTCTGAGTATCGGAACCACTGCTCGGACGTGATTGCTGGTTTCATCCTGGGCACTGCAGTGGCCCTGTTTCTGGGAATGTGTGTGGT TCATAACTTTAAAGGAACGCAAGGATCTCCTTCCAAACCCAAGCCTGAGGATCCCCGTGGAGTACCCCTAATGGCTTTCCCAAGGATAGA AAGCCCTCTGGAAACCTTAAGTGCACAGAATCACTCTGCGTCCATGACCGAAGTTACCTGAGACGACTGATGTGTCACAAGCTGTTTTTT AAAATCATCTTCCAATTCTATACTTCAAAACACACAGTTGCTCAATGTCAAACTGTGATGACAAATATTACGTTTATCTAGTTAGAAGCT AATGTTTTGTACATTTTTTGTATGAGGAAGTGATGTAGCTTGCCCTGATTTTTTTTTTTTTTTTTTGGTCAGCTTTAATATATTTATGCC AGAATTTTAAAACCAACAAAATTTTCTTGTTCAAGCGTGCATTGAAGAACCACATTTATTCAATGGTTGACGTTGTTTTGTGATATTTGT ACACAAATTTTCTTTTCTCAGTTTTATAAACACAGAATATAACAATTCACTTTAAACTTTTATTACCACAGTTGCTGCCTCCTCCAGAAT TTTTGAATTTTAATAAAAGGCAAACTTTTGAGCTGCAGGAAGGACAATGTTGGTTAATAATAAATCTCAAAGTCAATTGTAGAAAAAAAA TTGTCTTCAAAAAGAATGTTGCACTCTGATCTCTTAACAAATTGTTACGTTCAAAGTTTAAAGTGATATATTAACAAAGTCACCTAGTTA TACAAACAATTGTCAGAGAATTCTGGATTTGGAGGGTATTGGGGTTATATGATTCTTTCTTAGATAATGGCCTCTACTAAATAACTCAAG ATCTTTCTGGAATGTCTTCTGGCAGGCAGGTGCCACTGTCAGCTTTTCTCCAAAAAGCAGCCAACATCAGCCTCCCCTGTCAACTCAACA GTTTTGTATCTCATATTATATGGACTTTATATGAAAATGAATATTTTACAGTTTGCACAGTATTATTTTACAGAAAAGGAATCAGAGAAT CTACAACATAGGGCCCCAGAACAACAGTTTCACTTTGTGGCTTTTAATTATTCTAGAATTTTAACTGCATCTCATTTTTCTAGCATGGTG AGAACTAATATGTAACTCCTTTGATTGAAGGAGCTCTTTTGTCCGTACCTATCAGAATGTTTTCTTGACACTTCCATGTTGGCTCTTCTC >In-frame_ENST00000299421_ENST00000395056_TCGA-24-1434-01A_ILK_chr11_6629441_+_LPPR1_chr9_104075080_length(amino acids)=198AA_start in transcript=184_stop in transcript=780 MDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKMYITS TIKTKSSRLAKPVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSPSKPKPEDPRGVPLMAFPRIES -------------------------------------------------------------- >In-frame_ENST00000420936_ENST00000374874_TCGA-24-1434-01A_ILK_chr11_6629441_+_LPPR1_chr9_104075080_length(transcript)=1786nt_BP=366nt GCGGCGGGCTGCGGGCGCGGCCGGACGGGAGTTCCCCGGAGAAGGATCCTGCAGCCCGAGTCCCGTCCTCAGGCTTCCCCAATCCAGGGG ACTCGGCGCCGGGACGCTGCTATGGACGACATTTTCACTCAGTGCCGGGAGGGCAACGCAGTCGCCGTTCGCCTGTGGCTGGACAACACG GAGAACGACCTCAACCAGGGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCGAGAGGGCCGCTCTGCTGTGGTTGAGATGTTG ATCATGCGGGGGGCACGGATCAATGTAATGAACCGTGGGGATGACACCCCCCTGCATCTGGCAGCCAGTCATGGACACCGTGATATTGTA CAGAAGATGTATATTACAAGCACAATCAAGACGAAGAGCAGTCGACTGGCCAAGCCGGTGCTGTGCCTCGGAACTCTCTGCACAGCCTTC CTGACAGGCCTCAACCGGGTCTCTGAGTATCGGAACCACTGCTCGGACGTGATTGCTGGTTTCATCCTGGGCACTGCAGTGGCCCTGTTT CTGGGAATGTGTGTGGTTCATAACTTTAAAGGAACGCAAGGATCTCCTTCCAAACCCAAGCCTGAGGATCCCCGTGGAGTACCCCTAATG GCTTTCCCAAGGATAGAAAGCCCTCTGGAAACCTTAAGTGCACAGAATCACTCTGCGTCCATGACCGAAGTTACCTGAGACGACTGATGT GTCACAAGCTGTTTTTTAAAATCATCTTCCAATTCTATACTTCAAAACACACAGTTGCTCAATGTCAAACTGTGATGACAAATATTACGT TTATCTAGTTAGAAGCTAATGTTTTGTACATTTTTTGTATGAGGAAGTGATGTAGCTTGCCCTGATTTTTTTTTTTTTTTTTTGGTCAGC TTTAATATATTTATGCCAGAATTTTAAAACCAACAAAATTTTCTTGTTCAAGCGTGCATTGAAGAACCACATTTATTCAATGGTTGACGT TGTTTTGTGATATTTGTACACAAATTTTCTTTTCTCAGTTTTATAAACACAGAATATAACAATTCACTTTAAACTTTTATTACCACAGTT GCTGCCTCCTCCAGAATTTTTGAATTTTAATAAAAGGCAAACTTTTGAGCTGCAGGAAGGACAATGTTGGTTAATAATAAATCTCAAAGT CAATTGTAGAAAAAAAATTGTCTTCAAAAAGAATGTTGCACTCTGATCTCTTAACAAATTGTTACGTTCAAAGTTTAAAGTGATATATTA ACAAAGTCACCTAGTTATACAAACAATTGTCAGAGAATTCTGGATTTGGAGGGTATTGGGGTTATATGATTCTTTCTTAGATAATGGCCT CTACTAAATAACTCAAGATCTTTCTGGAATGTCTTCTGGCAGGCAGGTGCCACTGTCAGCTTTTCTCCAAAAAGCAGCCAACATCAGCCT CCCCTGTCAACTCAACAGTTTTGTATCTCATATTATATGGACTTTATATGAAAATGAATATTTTACAGTTTGCACAGTATTATTTTACAG AAAAGGAATCAGAGAATCTACAACATAGGGCCCCAGAACAACAGTTTCACTTTGTGGCTTTTAATTATTCTAGAATTTTAACTGCATCTC ATTTTTCTAGCATGGTGAGAACTAATATGTAACTCCTTTGATTGAAGGAGCTCTTTTGTCCGTACCTATCAGAATGTTTTCTTGACACTT >In-frame_ENST00000420936_ENST00000374874_TCGA-24-1434-01A_ILK_chr11_6629441_+_LPPR1_chr9_104075080_length(amino acids)=219AA_start in transcript=48_stop in transcript=707 MQPESRPQASPIQGTRRRDAAMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDT PLHLAASHGHRDIVQKMYITSTIKTKSSRLAKPVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSP -------------------------------------------------------------- >In-frame_ENST00000420936_ENST00000395056_TCGA-24-1434-01A_ILK_chr11_6629441_+_LPPR1_chr9_104075080_length(transcript)=1782nt_BP=366nt GCGGCGGGCTGCGGGCGCGGCCGGACGGGAGTTCCCCGGAGAAGGATCCTGCAGCCCGAGTCCCGTCCTCAGGCTTCCCCAATCCAGGGG ACTCGGCGCCGGGACGCTGCTATGGACGACATTTTCACTCAGTGCCGGGAGGGCAACGCAGTCGCCGTTCGCCTGTGGCTGGACAACACG GAGAACGACCTCAACCAGGGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCGAGAGGGCCGCTCTGCTGTGGTTGAGATGTTG ATCATGCGGGGGGCACGGATCAATGTAATGAACCGTGGGGATGACACCCCCCTGCATCTGGCAGCCAGTCATGGACACCGTGATATTGTA CAGAAGATGTATATTACAAGCACAATCAAGACGAAGAGCAGTCGACTGGCCAAGCCGGTGCTGTGCCTCGGAACTCTCTGCACAGCCTTC CTGACAGGCCTCAACCGGGTCTCTGAGTATCGGAACCACTGCTCGGACGTGATTGCTGGTTTCATCCTGGGCACTGCAGTGGCCCTGTTT CTGGGAATGTGTGTGGTTCATAACTTTAAAGGAACGCAAGGATCTCCTTCCAAACCCAAGCCTGAGGATCCCCGTGGAGTACCCCTAATG GCTTTCCCAAGGATAGAAAGCCCTCTGGAAACCTTAAGTGCACAGAATCACTCTGCGTCCATGACCGAAGTTACCTGAGACGACTGATGT GTCACAAGCTGTTTTTTAAAATCATCTTCCAATTCTATACTTCAAAACACACAGTTGCTCAATGTCAAACTGTGATGACAAATATTACGT TTATCTAGTTAGAAGCTAATGTTTTGTACATTTTTTGTATGAGGAAGTGATGTAGCTTGCCCTGATTTTTTTTTTTTTTTTTTGGTCAGC TTTAATATATTTATGCCAGAATTTTAAAACCAACAAAATTTTCTTGTTCAAGCGTGCATTGAAGAACCACATTTATTCAATGGTTGACGT TGTTTTGTGATATTTGTACACAAATTTTCTTTTCTCAGTTTTATAAACACAGAATATAACAATTCACTTTAAACTTTTATTACCACAGTT GCTGCCTCCTCCAGAATTTTTGAATTTTAATAAAAGGCAAACTTTTGAGCTGCAGGAAGGACAATGTTGGTTAATAATAAATCTCAAAGT CAATTGTAGAAAAAAAATTGTCTTCAAAAAGAATGTTGCACTCTGATCTCTTAACAAATTGTTACGTTCAAAGTTTAAAGTGATATATTA ACAAAGTCACCTAGTTATACAAACAATTGTCAGAGAATTCTGGATTTGGAGGGTATTGGGGTTATATGATTCTTTCTTAGATAATGGCCT CTACTAAATAACTCAAGATCTTTCTGGAATGTCTTCTGGCAGGCAGGTGCCACTGTCAGCTTTTCTCCAAAAAGCAGCCAACATCAGCCT CCCCTGTCAACTCAACAGTTTTGTATCTCATATTATATGGACTTTATATGAAAATGAATATTTTACAGTTTGCACAGTATTATTTTACAG AAAAGGAATCAGAGAATCTACAACATAGGGCCCCAGAACAACAGTTTCACTTTGTGGCTTTTAATTATTCTAGAATTTTAACTGCATCTC ATTTTTCTAGCATGGTGAGAACTAATATGTAACTCCTTTGATTGAAGGAGCTCTTTTGTCCGTACCTATCAGAATGTTTTCTTGACACTT >In-frame_ENST00000420936_ENST00000395056_TCGA-24-1434-01A_ILK_chr11_6629441_+_LPPR1_chr9_104075080_length(amino acids)=219AA_start in transcript=48_stop in transcript=707 MQPESRPQASPIQGTRRRDAAMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDT PLHLAASHGHRDIVQKMYITSTIKTKSSRLAKPVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSP -------------------------------------------------------------- >In-frame_ENST00000528995_ENST00000374874_TCGA-24-1434-01A_ILK_chr11_6629441_+_LPPR1_chr9_104075080_length(transcript)=1803nt_BP=383nt AGTTCCCCGGAGAAGGATCCTGCAGCCCGAGTCCCGAGGATAAAGCTTGGGGTTCATCCTCCTTCCCTGGATCACTCCACAGTCCTCAGG CTTCCCCAATCCAGGGGACTCGGCGCCGGGACGCTGCTATGGACGACATTTTCACTCAGTGCCGGGAGGGCAACGCAGTCGCCGTTCGCC TGTGGCTGGACAACACGGAGAACGACCTCAACCAGGGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCGAGAGGGCCGCTCTG CTGTGGTTGAGATGTTGATCATGCGGGGGGCACGGATCAATGTAATGAACCGTGGGGATGACACCCCCCTGCATCTGGCAGCCAGTCATG GACACCGTGATATTGTACAGAAGATGTATATTACAAGCACAATCAAGACGAAGAGCAGTCGACTGGCCAAGCCGGTGCTGTGCCTCGGAA CTCTCTGCACAGCCTTCCTGACAGGCCTCAACCGGGTCTCTGAGTATCGGAACCACTGCTCGGACGTGATTGCTGGTTTCATCCTGGGCA CTGCAGTGGCCCTGTTTCTGGGAATGTGTGTGGTTCATAACTTTAAAGGAACGCAAGGATCTCCTTCCAAACCCAAGCCTGAGGATCCCC GTGGAGTACCCCTAATGGCTTTCCCAAGGATAGAAAGCCCTCTGGAAACCTTAAGTGCACAGAATCACTCTGCGTCCATGACCGAAGTTA CCTGAGACGACTGATGTGTCACAAGCTGTTTTTTAAAATCATCTTCCAATTCTATACTTCAAAACACACAGTTGCTCAATGTCAAACTGT GATGACAAATATTACGTTTATCTAGTTAGAAGCTAATGTTTTGTACATTTTTTGTATGAGGAAGTGATGTAGCTTGCCCTGATTTTTTTT TTTTTTTTTTGGTCAGCTTTAATATATTTATGCCAGAATTTTAAAACCAACAAAATTTTCTTGTTCAAGCGTGCATTGAAGAACCACATT TATTCAATGGTTGACGTTGTTTTGTGATATTTGTACACAAATTTTCTTTTCTCAGTTTTATAAACACAGAATATAACAATTCACTTTAAA CTTTTATTACCACAGTTGCTGCCTCCTCCAGAATTTTTGAATTTTAATAAAAGGCAAACTTTTGAGCTGCAGGAAGGACAATGTTGGTTA ATAATAAATCTCAAAGTCAATTGTAGAAAAAAAATTGTCTTCAAAAAGAATGTTGCACTCTGATCTCTTAACAAATTGTTACGTTCAAAG TTTAAAGTGATATATTAACAAAGTCACCTAGTTATACAAACAATTGTCAGAGAATTCTGGATTTGGAGGGTATTGGGGTTATATGATTCT TTCTTAGATAATGGCCTCTACTAAATAACTCAAGATCTTTCTGGAATGTCTTCTGGCAGGCAGGTGCCACTGTCAGCTTTTCTCCAAAAA GCAGCCAACATCAGCCTCCCCTGTCAACTCAACAGTTTTGTATCTCATATTATATGGACTTTATATGAAAATGAATATTTTACAGTTTGC ACAGTATTATTTTACAGAAAAGGAATCAGAGAATCTACAACATAGGGCCCCAGAACAACAGTTTCACTTTGTGGCTTTTAATTATTCTAG AATTTTAACTGCATCTCATTTTTCTAGCATGGTGAGAACTAATATGTAACTCCTTTGATTGAAGGAGCTCTTTTGTCCGTACCTATCAGA ATGTTTTCTTGACACTTCCATGTTGGCTCTTCTCAGCTTTTTTTGTACATATTTTTTTTTTCTAAAGAGAAGAAAAAGTTATCACAAAAT >In-frame_ENST00000528995_ENST00000374874_TCGA-24-1434-01A_ILK_chr11_6629441_+_LPPR1_chr9_104075080_length(amino acids)=198AA_start in transcript=128_stop in transcript=724 MDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKMYITS TIKTKSSRLAKPVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSPSKPKPEDPRGVPLMAFPRIES -------------------------------------------------------------- >In-frame_ENST00000528995_ENST00000395056_TCGA-24-1434-01A_ILK_chr11_6629441_+_LPPR1_chr9_104075080_length(transcript)=1799nt_BP=383nt AGTTCCCCGGAGAAGGATCCTGCAGCCCGAGTCCCGAGGATAAAGCTTGGGGTTCATCCTCCTTCCCTGGATCACTCCACAGTCCTCAGG CTTCCCCAATCCAGGGGACTCGGCGCCGGGACGCTGCTATGGACGACATTTTCACTCAGTGCCGGGAGGGCAACGCAGTCGCCGTTCGCC TGTGGCTGGACAACACGGAGAACGACCTCAACCAGGGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCGAGAGGGCCGCTCTG CTGTGGTTGAGATGTTGATCATGCGGGGGGCACGGATCAATGTAATGAACCGTGGGGATGACACCCCCCTGCATCTGGCAGCCAGTCATG GACACCGTGATATTGTACAGAAGATGTATATTACAAGCACAATCAAGACGAAGAGCAGTCGACTGGCCAAGCCGGTGCTGTGCCTCGGAA CTCTCTGCACAGCCTTCCTGACAGGCCTCAACCGGGTCTCTGAGTATCGGAACCACTGCTCGGACGTGATTGCTGGTTTCATCCTGGGCA CTGCAGTGGCCCTGTTTCTGGGAATGTGTGTGGTTCATAACTTTAAAGGAACGCAAGGATCTCCTTCCAAACCCAAGCCTGAGGATCCCC GTGGAGTACCCCTAATGGCTTTCCCAAGGATAGAAAGCCCTCTGGAAACCTTAAGTGCACAGAATCACTCTGCGTCCATGACCGAAGTTA CCTGAGACGACTGATGTGTCACAAGCTGTTTTTTAAAATCATCTTCCAATTCTATACTTCAAAACACACAGTTGCTCAATGTCAAACTGT GATGACAAATATTACGTTTATCTAGTTAGAAGCTAATGTTTTGTACATTTTTTGTATGAGGAAGTGATGTAGCTTGCCCTGATTTTTTTT TTTTTTTTTTGGTCAGCTTTAATATATTTATGCCAGAATTTTAAAACCAACAAAATTTTCTTGTTCAAGCGTGCATTGAAGAACCACATT TATTCAATGGTTGACGTTGTTTTGTGATATTTGTACACAAATTTTCTTTTCTCAGTTTTATAAACACAGAATATAACAATTCACTTTAAA CTTTTATTACCACAGTTGCTGCCTCCTCCAGAATTTTTGAATTTTAATAAAAGGCAAACTTTTGAGCTGCAGGAAGGACAATGTTGGTTA ATAATAAATCTCAAAGTCAATTGTAGAAAAAAAATTGTCTTCAAAAAGAATGTTGCACTCTGATCTCTTAACAAATTGTTACGTTCAAAG TTTAAAGTGATATATTAACAAAGTCACCTAGTTATACAAACAATTGTCAGAGAATTCTGGATTTGGAGGGTATTGGGGTTATATGATTCT TTCTTAGATAATGGCCTCTACTAAATAACTCAAGATCTTTCTGGAATGTCTTCTGGCAGGCAGGTGCCACTGTCAGCTTTTCTCCAAAAA GCAGCCAACATCAGCCTCCCCTGTCAACTCAACAGTTTTGTATCTCATATTATATGGACTTTATATGAAAATGAATATTTTACAGTTTGC ACAGTATTATTTTACAGAAAAGGAATCAGAGAATCTACAACATAGGGCCCCAGAACAACAGTTTCACTTTGTGGCTTTTAATTATTCTAG AATTTTAACTGCATCTCATTTTTCTAGCATGGTGAGAACTAATATGTAACTCCTTTGATTGAAGGAGCTCTTTTGTCCGTACCTATCAGA >In-frame_ENST00000528995_ENST00000395056_TCGA-24-1434-01A_ILK_chr11_6629441_+_LPPR1_chr9_104075080_length(amino acids)=198AA_start in transcript=128_stop in transcript=724 MDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKMYITS TIKTKSSRLAKPVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSPSKPKPEDPRGVPLMAFPRIES -------------------------------------------------------------- >In-frame_ENST00000396751_ENST00000374874_TCGA-24-1434-01A_ILK_chr11_6629441_+_LPPR1_chr9_104075080_length(transcript)=2131nt_BP=711nt AGTCCCGGTGAGTGCGAGAGGACCCGCGCCCCCTGTCACCCCTCACTTCTCCTGAGTCCCAAGTAAGGAACGGAGCCAACCCTGGGGAGG ACCCCCGGTCCCCTCTCCCAGAGTATACGGAGCCTGAACCTCCCCACTTCCCCCAACTCTGTTCGCGGATAGGGTCTAGTTGCCTGCTCT CGGACATCCGTTCAGCAGACACTACCTCTTCGTCACCCCCTGCCCACCCTGACCCGCCTTTACCTCGCGTCTAGAGGACACAGCCAGGGA TCATCCCGCAGCCCCGAACTCCTTCACAGACCCCCACTAGCCGGGGACGCAGCTCAGGCCCCCTACCCCCAACACAAACACTTCTCTCCT GTAGAGGATAAAGCTTGGGGTTCATCCTCCTTCCCTGGATCACTCCACAGTCCTCAGGCTTCCCCAATCCAGGGGACTCGGCGCCGGGAC GCTGCTATGGACGACATTTTCACTCAGTGCCGGGAGGGCAACGCAGTCGCCGTTCGCCTGTGGCTGGACAACACGGAGAACGACCTCAAC CAGGGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCGAGAGGGCCGCTCTGCTGTGGTTGAGATGTTGATCATGCGGGGGGCA CGGATCAATGTAATGAACCGTGGGGATGACACCCCCCTGCATCTGGCAGCCAGTCATGGACACCGTGATATTGTACAGAAGATGTATATT ACAAGCACAATCAAGACGAAGAGCAGTCGACTGGCCAAGCCGGTGCTGTGCCTCGGAACTCTCTGCACAGCCTTCCTGACAGGCCTCAAC CGGGTCTCTGAGTATCGGAACCACTGCTCGGACGTGATTGCTGGTTTCATCCTGGGCACTGCAGTGGCCCTGTTTCTGGGAATGTGTGTG GTTCATAACTTTAAAGGAACGCAAGGATCTCCTTCCAAACCCAAGCCTGAGGATCCCCGTGGAGTACCCCTAATGGCTTTCCCAAGGATA GAAAGCCCTCTGGAAACCTTAAGTGCACAGAATCACTCTGCGTCCATGACCGAAGTTACCTGAGACGACTGATGTGTCACAAGCTGTTTT TTAAAATCATCTTCCAATTCTATACTTCAAAACACACAGTTGCTCAATGTCAAACTGTGATGACAAATATTACGTTTATCTAGTTAGAAG CTAATGTTTTGTACATTTTTTGTATGAGGAAGTGATGTAGCTTGCCCTGATTTTTTTTTTTTTTTTTTGGTCAGCTTTAATATATTTATG CCAGAATTTTAAAACCAACAAAATTTTCTTGTTCAAGCGTGCATTGAAGAACCACATTTATTCAATGGTTGACGTTGTTTTGTGATATTT GTACACAAATTTTCTTTTCTCAGTTTTATAAACACAGAATATAACAATTCACTTTAAACTTTTATTACCACAGTTGCTGCCTCCTCCAGA ATTTTTGAATTTTAATAAAAGGCAAACTTTTGAGCTGCAGGAAGGACAATGTTGGTTAATAATAAATCTCAAAGTCAATTGTAGAAAAAA AATTGTCTTCAAAAAGAATGTTGCACTCTGATCTCTTAACAAATTGTTACGTTCAAAGTTTAAAGTGATATATTAACAAAGTCACCTAGT TATACAAACAATTGTCAGAGAATTCTGGATTTGGAGGGTATTGGGGTTATATGATTCTTTCTTAGATAATGGCCTCTACTAAATAACTCA AGATCTTTCTGGAATGTCTTCTGGCAGGCAGGTGCCACTGTCAGCTTTTCTCCAAAAAGCAGCCAACATCAGCCTCCCCTGTCAACTCAA CAGTTTTGTATCTCATATTATATGGACTTTATATGAAAATGAATATTTTACAGTTTGCACAGTATTATTTTACAGAAAAGGAATCAGAGA ATCTACAACATAGGGCCCCAGAACAACAGTTTCACTTTGTGGCTTTTAATTATTCTAGAATTTTAACTGCATCTCATTTTTCTAGCATGG TGAGAACTAATATGTAACTCCTTTGATTGAAGGAGCTCTTTTGTCCGTACCTATCAGAATGTTTTCTTGACACTTCCATGTTGGCTCTTC >In-frame_ENST00000396751_ENST00000374874_TCGA-24-1434-01A_ILK_chr11_6629441_+_LPPR1_chr9_104075080_length(amino acids)=277AA_start in transcript=219_stop in transcript=1052 MPTLTRLYLASRGHSQGSSRSPELLHRPPLAGDAAQAPYPQHKHFSPVEDKAWGSSSFPGSLHSPQASPIQGTRRRDAAMDDIFTQCREG NAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKMYITSTIKTKSSRLAK PVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSPSKPKPEDPRGVPLMAFPRIESPLETLSAQNHS -------------------------------------------------------------- >In-frame_ENST00000396751_ENST00000395056_TCGA-24-1434-01A_ILK_chr11_6629441_+_LPPR1_chr9_104075080_length(transcript)=2127nt_BP=711nt AGTCCCGGTGAGTGCGAGAGGACCCGCGCCCCCTGTCACCCCTCACTTCTCCTGAGTCCCAAGTAAGGAACGGAGCCAACCCTGGGGAGG ACCCCCGGTCCCCTCTCCCAGAGTATACGGAGCCTGAACCTCCCCACTTCCCCCAACTCTGTTCGCGGATAGGGTCTAGTTGCCTGCTCT CGGACATCCGTTCAGCAGACACTACCTCTTCGTCACCCCCTGCCCACCCTGACCCGCCTTTACCTCGCGTCTAGAGGACACAGCCAGGGA TCATCCCGCAGCCCCGAACTCCTTCACAGACCCCCACTAGCCGGGGACGCAGCTCAGGCCCCCTACCCCCAACACAAACACTTCTCTCCT GTAGAGGATAAAGCTTGGGGTTCATCCTCCTTCCCTGGATCACTCCACAGTCCTCAGGCTTCCCCAATCCAGGGGACTCGGCGCCGGGAC GCTGCTATGGACGACATTTTCACTCAGTGCCGGGAGGGCAACGCAGTCGCCGTTCGCCTGTGGCTGGACAACACGGAGAACGACCTCAAC CAGGGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCGAGAGGGCCGCTCTGCTGTGGTTGAGATGTTGATCATGCGGGGGGCA CGGATCAATGTAATGAACCGTGGGGATGACACCCCCCTGCATCTGGCAGCCAGTCATGGACACCGTGATATTGTACAGAAGATGTATATT ACAAGCACAATCAAGACGAAGAGCAGTCGACTGGCCAAGCCGGTGCTGTGCCTCGGAACTCTCTGCACAGCCTTCCTGACAGGCCTCAAC CGGGTCTCTGAGTATCGGAACCACTGCTCGGACGTGATTGCTGGTTTCATCCTGGGCACTGCAGTGGCCCTGTTTCTGGGAATGTGTGTG GTTCATAACTTTAAAGGAACGCAAGGATCTCCTTCCAAACCCAAGCCTGAGGATCCCCGTGGAGTACCCCTAATGGCTTTCCCAAGGATA GAAAGCCCTCTGGAAACCTTAAGTGCACAGAATCACTCTGCGTCCATGACCGAAGTTACCTGAGACGACTGATGTGTCACAAGCTGTTTT TTAAAATCATCTTCCAATTCTATACTTCAAAACACACAGTTGCTCAATGTCAAACTGTGATGACAAATATTACGTTTATCTAGTTAGAAG CTAATGTTTTGTACATTTTTTGTATGAGGAAGTGATGTAGCTTGCCCTGATTTTTTTTTTTTTTTTTTGGTCAGCTTTAATATATTTATG CCAGAATTTTAAAACCAACAAAATTTTCTTGTTCAAGCGTGCATTGAAGAACCACATTTATTCAATGGTTGACGTTGTTTTGTGATATTT GTACACAAATTTTCTTTTCTCAGTTTTATAAACACAGAATATAACAATTCACTTTAAACTTTTATTACCACAGTTGCTGCCTCCTCCAGA ATTTTTGAATTTTAATAAAAGGCAAACTTTTGAGCTGCAGGAAGGACAATGTTGGTTAATAATAAATCTCAAAGTCAATTGTAGAAAAAA AATTGTCTTCAAAAAGAATGTTGCACTCTGATCTCTTAACAAATTGTTACGTTCAAAGTTTAAAGTGATATATTAACAAAGTCACCTAGT TATACAAACAATTGTCAGAGAATTCTGGATTTGGAGGGTATTGGGGTTATATGATTCTTTCTTAGATAATGGCCTCTACTAAATAACTCA AGATCTTTCTGGAATGTCTTCTGGCAGGCAGGTGCCACTGTCAGCTTTTCTCCAAAAAGCAGCCAACATCAGCCTCCCCTGTCAACTCAA CAGTTTTGTATCTCATATTATATGGACTTTATATGAAAATGAATATTTTACAGTTTGCACAGTATTATTTTACAGAAAAGGAATCAGAGA ATCTACAACATAGGGCCCCAGAACAACAGTTTCACTTTGTGGCTTTTAATTATTCTAGAATTTTAACTGCATCTCATTTTTCTAGCATGG TGAGAACTAATATGTAACTCCTTTGATTGAAGGAGCTCTTTTGTCCGTACCTATCAGAATGTTTTCTTGACACTTCCATGTTGGCTCTTC >In-frame_ENST00000396751_ENST00000395056_TCGA-24-1434-01A_ILK_chr11_6629441_+_LPPR1_chr9_104075080_length(amino acids)=277AA_start in transcript=219_stop in transcript=1052 MPTLTRLYLASRGHSQGSSRSPELLHRPPLAGDAAQAPYPQHKHFSPVEDKAWGSSSFPGSLHSPQASPIQGTRRRDAAMDDIFTQCREG NAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKMYITSTIKTKSSRLAK PVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSPSKPKPEDPRGVPLMAFPRIESPLETLSAQNHS -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for ILK-LPPR1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | ILK | chr11:6629441 | chr9:104075079 | ENST00000299421 | + | 3 | 13 | 33_139 | 85.0 | 453.0 | LIMS1 |
Hgene | ILK | chr11:6629441 | chr9:104075079 | ENST00000396751 | + | 2 | 12 | 33_139 | 85.0 | 453.0 | LIMS1 |
Hgene | ILK | chr11:6629441 | chr9:104075079 | ENST00000420936 | + | 3 | 13 | 33_139 | 85.0 | 453.0 | LIMS1 |
Hgene | ILK | chr11:6629441 | chr9:104075080 | ENST00000299421 | + | 3 | 13 | 33_139 | 85.0 | 453.0 | LIMS1 |
Hgene | ILK | chr11:6629441 | chr9:104075080 | ENST00000396751 | + | 2 | 12 | 33_139 | 85.0 | 453.0 | LIMS1 |
Hgene | ILK | chr11:6629441 | chr9:104075080 | ENST00000420936 | + | 3 | 13 | 33_139 | 85.0 | 453.0 | LIMS1 |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for ILK-LPPR1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for ILK-LPPR1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | ILK | C0009171 | Cocaine Abuse | 2 | CTD_human |
Hgene | ILK | C0236736 | Cocaine-Related Disorders | 2 | CTD_human |
Hgene | ILK | C0600427 | Cocaine Dependence | 2 | CTD_human |
Hgene | ILK | C0007787 | Transient Ischemic Attack | 1 | CTD_human |
Hgene | ILK | C0009376 | Colonic Polyps | 1 | CTD_human |
Hgene | ILK | C0014544 | Epilepsy | 1 | CTD_human |
Hgene | ILK | C0023893 | Liver Cirrhosis, Experimental | 1 | CTD_human |
Hgene | ILK | C0039978 | Thoracic Diseases | 1 | CTD_human |
Hgene | ILK | C0086237 | Epilepsy, Cryptogenic | 1 | CTD_human |
Hgene | ILK | C0236018 | Aura | 1 | CTD_human |
Hgene | ILK | C0345967 | Malignant mesothelioma | 1 | CTD_human |
Hgene | ILK | C0472381 | Posterior Circulation Transient Ischemic Attack | 1 | CTD_human |
Hgene | ILK | C0751019 | Carotid Circulation Transient Ischemic Attack | 1 | CTD_human |
Hgene | ILK | C0751020 | Transient Ischemic Attack, Vertebrobasilar Circulation | 1 | CTD_human |
Hgene | ILK | C0751021 | Crescendo Transient Ischemic Attacks | 1 | CTD_human |
Hgene | ILK | C0751022 | Brain Stem Ischemia, Transient | 1 | CTD_human |
Hgene | ILK | C0751111 | Awakening Epilepsy | 1 | CTD_human |
Hgene | ILK | C0917805 | Transient Cerebral Ischemia | 1 | CTD_human |
Hgene | ILK | C1527335 | Transient Ischemic Attack, Anterior Circulation | 1 | CTD_human |