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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:ALDH3A2-EIF5A (FusionGDB2 ID:4006) |
Fusion Gene Summary for ALDH3A2-EIF5A |
Fusion gene summary |
Fusion gene information | Fusion gene name: ALDH3A2-EIF5A | Fusion gene ID: 4006 | Hgene | Tgene | Gene symbol | ALDH3A2 | EIF5A | Gene ID | 224 | 143244 |
Gene name | aldehyde dehydrogenase 3 family member A2 | eukaryotic translation initiation factor 5A like 1 | |
Synonyms | ALDH10|FALDH|SLS | EIF5A|EIF5AP1|bA342M3.3|eIF-4D|eIF-5A|eIF-5A-1|eIF-5A1 | |
Cytomap | 17p11.2 | 10q22.3 | |
Type of gene | protein-coding | protein-coding | |
Description | aldehyde dehydrogenase family 3 member A2aldehyde dehydrogenase 10fatty aldehyde dehydrogenasemicrosomal aldehyde dehydrogenase | eukaryotic translation initiation factor 5A-1-likeEukaryotic translation initiation factor 5A-1Rev-binding factoreukaryotic translation initiation factor 5A pseudogene 1 | |
Modification date | 20200315 | 20200313 | |
UniProtAcc | P51648 | Q6IS14 | |
Ensembl transtripts involved in fusion gene | ENST00000176643, ENST00000581518, ENST00000395575, ENST00000339618, ENST00000579855, ENST00000571163, ENST00000574597, | ENST00000336452, ENST00000336458, ENST00000576930, ENST00000572815, ENST00000573542, ENST00000419711, ENST00000571955, ENST00000416016, | |
Fusion gene scores | * DoF score | 6 X 5 X 5=150 | 9 X 5 X 8=360 |
# samples | 6 | 9 | |
** MAII score | log2(6/150*10)=-1.32192809488736 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(9/360*10)=-2 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: ALDH3A2 [Title/Abstract] AND EIF5A [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | ALDH3A2(19575269)-EIF5A(7212934), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | ALDH3A2 | GO:0006081 | cellular aldehyde metabolic process | 9133646 |
Hgene | ALDH3A2 | GO:0046458 | hexadecanal metabolic process | 25047030 |
Hgene | ALDH3A2 | GO:0055114 | oxidation-reduction process | 9133646 |
Fusion gene breakpoints across ALDH3A2 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across EIF5A (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | ACC | TCGA-OR-A5KY-01A | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
ChimerDB4 | ACC | TCGA-OR-A5KY-01A | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
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Fusion Gene ORF analysis for ALDH3A2-EIF5A |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000176643 | ENST00000336452 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000176643 | ENST00000336458 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000176643 | ENST00000576930 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000176643 | ENST00000572815 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000176643 | ENST00000573542 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000176643 | ENST00000419711 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000176643 | ENST00000571955 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000176643 | ENST00000416016 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
In-frame | ENST00000581518 | ENST00000336452 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000581518 | ENST00000336458 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000581518 | ENST00000576930 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000581518 | ENST00000572815 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000581518 | ENST00000573542 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000581518 | ENST00000419711 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000581518 | ENST00000571955 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000581518 | ENST00000416016 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
In-frame | ENST00000395575 | ENST00000336452 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000395575 | ENST00000336458 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000395575 | ENST00000576930 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000395575 | ENST00000572815 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000395575 | ENST00000573542 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000395575 | ENST00000419711 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000395575 | ENST00000571955 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000395575 | ENST00000416016 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
In-frame | ENST00000339618 | ENST00000336452 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000339618 | ENST00000336458 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000339618 | ENST00000576930 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000339618 | ENST00000572815 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000339618 | ENST00000573542 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000339618 | ENST00000419711 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000339618 | ENST00000571955 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000339618 | ENST00000416016 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
In-frame | ENST00000579855 | ENST00000336452 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000579855 | ENST00000336458 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000579855 | ENST00000576930 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000579855 | ENST00000572815 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000579855 | ENST00000573542 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000579855 | ENST00000419711 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000579855 | ENST00000571955 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
5CDS-5UTR | ENST00000579855 | ENST00000416016 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
intron-3CDS | ENST00000571163 | ENST00000336452 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
intron-5UTR | ENST00000571163 | ENST00000336458 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
intron-5UTR | ENST00000571163 | ENST00000576930 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
intron-5UTR | ENST00000571163 | ENST00000572815 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
intron-5UTR | ENST00000571163 | ENST00000573542 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
intron-5UTR | ENST00000571163 | ENST00000419711 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
intron-5UTR | ENST00000571163 | ENST00000571955 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
intron-5UTR | ENST00000571163 | ENST00000416016 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
intron-3CDS | ENST00000574597 | ENST00000336452 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
intron-5UTR | ENST00000574597 | ENST00000336458 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
intron-5UTR | ENST00000574597 | ENST00000576930 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
intron-5UTR | ENST00000574597 | ENST00000572815 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
intron-5UTR | ENST00000574597 | ENST00000573542 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
intron-5UTR | ENST00000574597 | ENST00000419711 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
intron-5UTR | ENST00000574597 | ENST00000571955 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
intron-5UTR | ENST00000574597 | ENST00000416016 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000176643 | ALDH3A2 | chr17 | 19575269 | + | ENST00000336452 | EIF5A | chr17 | 7212934 | + | 3020 | 1889 | 212 | 2374 | 720 |
ENST00000581518 | ALDH3A2 | chr17 | 19575269 | + | ENST00000336452 | EIF5A | chr17 | 7212934 | + | 2823 | 1692 | 15 | 2177 | 720 |
ENST00000395575 | ALDH3A2 | chr17 | 19575269 | + | ENST00000336452 | EIF5A | chr17 | 7212934 | + | 2732 | 1601 | 113 | 2086 | 657 |
ENST00000339618 | ALDH3A2 | chr17 | 19575269 | + | ENST00000336452 | EIF5A | chr17 | 7212934 | + | 2795 | 1664 | 98 | 2149 | 683 |
ENST00000579855 | ALDH3A2 | chr17 | 19575269 | + | ENST00000336452 | EIF5A | chr17 | 7212934 | + | 2673 | 1542 | 57 | 2027 | 656 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000176643 | ENST00000336452 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + | 0.001968806 | 0.9980312 |
ENST00000581518 | ENST00000336452 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + | 0.001713259 | 0.99828666 |
ENST00000395575 | ENST00000336452 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + | 0.001691944 | 0.99830806 |
ENST00000339618 | ENST00000336452 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + | 0.001689773 | 0.9983102 |
ENST00000579855 | ENST00000336452 | ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212934 | + | 0.001654505 | 0.9983455 |
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Fusion Genomic Features for ALDH3A2-EIF5A |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212933 | + | 6.39E-08 | 0.9999999 |
ALDH3A2 | chr17 | 19575269 | + | EIF5A | chr17 | 7212933 | + | 6.39E-08 | 0.9999999 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for ALDH3A2-EIF5A |
Go to FGviewer for the breakpoints of chr17:19575269-chr17:7212934 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
ALDH3A2 | EIF5A |
FUNCTION: Catalyzes the oxidation of medium and long chain aliphatic aldehydes to fatty acids. Active on a variety of saturated and unsaturated aliphatic aldehydes between 6 and 24 carbons in length (PubMed:9133646, PubMed:22633490, PubMed:25047030, PubMed:18035827, PubMed:9662422, PubMed:18182499). Responsible for conversion of the sphingosine 1-phosphate (S1P) degradation product hexadecenal to hexadecenoic acid (PubMed:22633490). {ECO:0000269|PubMed:18035827, ECO:0000269|PubMed:18182499, ECO:0000269|PubMed:22633490, ECO:0000269|PubMed:25047030, ECO:0000269|PubMed:9133646, ECO:0000269|PubMed:9662422}. | FUNCTION: mRNA-binding protein involved in translation elongation. Has an important function at the level of mRNA turnover, probably acting downstream of decapping. Involved in actin dynamics and cell cycle progression, mRNA decay and probably in a pathway involved in stress response and maintenance of cell wall integrity. Functions as a regulator of apoptosis. Mediates effects of polyamines on neuronal process extension and survival. May play an important role in brain development and function, and in skeletal muscle stem cell differentiation (By similarity). {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ALDH3A2 | chr17:19575269 | chr17:7212934 | ENST00000176643 | + | 9 | 10 | 185_190 | 481.0 | 486.0 | Nucleotide binding | NAD |
Hgene | ALDH3A2 | chr17:19575269 | chr17:7212934 | ENST00000339618 | + | 9 | 11 | 185_190 | 481.0 | 1064.0 | Nucleotide binding | NAD |
Hgene | ALDH3A2 | chr17:19575269 | chr17:7212934 | ENST00000395575 | + | 10 | 11 | 185_190 | 481.0 | 486.0 | Nucleotide binding | NAD |
Hgene | ALDH3A2 | chr17:19575269 | chr17:7212934 | ENST00000579855 | + | 10 | 11 | 185_190 | 481.0 | 486.0 | Nucleotide binding | NAD |
Hgene | ALDH3A2 | chr17:19575269 | chr17:7212934 | ENST00000581518 | + | 9 | 12 | 185_190 | 481.0 | 620.3333333333334 | Nucleotide binding | NAD |
Hgene | ALDH3A2 | chr17:19575269 | chr17:7212934 | ENST00000176643 | + | 9 | 10 | 1_463 | 481.0 | 486.0 | Topological domain | Note=Cytoplasmic |
Hgene | ALDH3A2 | chr17:19575269 | chr17:7212934 | ENST00000339618 | + | 9 | 11 | 1_463 | 481.0 | 1064.0 | Topological domain | Note=Cytoplasmic |
Hgene | ALDH3A2 | chr17:19575269 | chr17:7212934 | ENST00000395575 | + | 10 | 11 | 1_463 | 481.0 | 486.0 | Topological domain | Note=Cytoplasmic |
Hgene | ALDH3A2 | chr17:19575269 | chr17:7212934 | ENST00000579855 | + | 10 | 11 | 1_463 | 481.0 | 486.0 | Topological domain | Note=Cytoplasmic |
Hgene | ALDH3A2 | chr17:19575269 | chr17:7212934 | ENST00000581518 | + | 9 | 12 | 1_463 | 481.0 | 620.3333333333334 | Topological domain | Note=Cytoplasmic |
Hgene | ALDH3A2 | chr17:19575269 | chr17:7212934 | ENST00000176643 | + | 9 | 10 | 464_484 | 481.0 | 486.0 | Transmembrane | Helical |
Hgene | ALDH3A2 | chr17:19575269 | chr17:7212934 | ENST00000339618 | + | 9 | 11 | 464_484 | 481.0 | 1064.0 | Transmembrane | Helical |
Hgene | ALDH3A2 | chr17:19575269 | chr17:7212934 | ENST00000395575 | + | 10 | 11 | 464_484 | 481.0 | 486.0 | Transmembrane | Helical |
Hgene | ALDH3A2 | chr17:19575269 | chr17:7212934 | ENST00000579855 | + | 10 | 11 | 464_484 | 481.0 | 486.0 | Transmembrane | Helical |
Hgene | ALDH3A2 | chr17:19575269 | chr17:7212934 | ENST00000581518 | + | 9 | 12 | 464_484 | 481.0 | 620.3333333333334 | Transmembrane | Helical |
Tgene | EIF5A | chr17:19575269 | chr17:7212934 | ENST00000336452 | 0 | 6 | 20_90 | 23.0 | 357.3333333333333 | Region | Note=DOHH-binding | |
Tgene | EIF5A | chr17:19575269 | chr17:7212934 | ENST00000336458 | 0 | 6 | 20_90 | 0 | 239.66666666666666 | Region | Note=DOHH-binding | |
Tgene | EIF5A | chr17:19575269 | chr17:7212934 | ENST00000416016 | 0 | 6 | 20_90 | 0 | 298.0 | Region | Note=DOHH-binding | |
Tgene | EIF5A | chr17:19575269 | chr17:7212934 | ENST00000419711 | 0 | 6 | 20_90 | 0 | 319.6666666666667 | Region | Note=DOHH-binding | |
Tgene | EIF5A | chr17:19575269 | chr17:7212934 | ENST00000571955 | 1 | 7 | 20_90 | 0 | 319.6666666666667 | Region | Note=DOHH-binding | |
Tgene | EIF5A | chr17:19575269 | chr17:7212934 | ENST00000573542 | 0 | 6 | 20_90 | 0 | 245.66666666666666 | Region | Note=DOHH-binding | |
Tgene | EIF5A | chr17:19575269 | chr17:7212934 | ENST00000576930 | 1 | 7 | 20_90 | 0 | 295.3333333333333 | Region | Note=DOHH-binding |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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Fusion Gene Sequence for ALDH3A2-EIF5A |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000176643_ENST00000336452_TCGA-OR-A5KY-01A_ALDH3A2_chr17_19575269_+_EIF5A_chr17_7212934_length(transcript)=3020nt_BP=1889nt CCGGGGCGCTCTCAGCAGGATGGCCAACACCTTCCCTCCATCCCTACACCCCGCCGCCCCCTGGCCCGTGGCCGCGCTCGGCTCCCGCAC TGCTCACTCCACCCCCTACATCCCAGCCCGCTGCCAGAGCCGGGGAGAGGGCGGGGGCCGCGTGGGCGAGGCCGTGAACAGCGGCTGTCA CGTGGGCCGCCCAGGCCAATAGGGGTGAGGCTTTGGGTCGAGCTCAGTCCTCCCCCGGCGCCTCCGACTGGCAGTGGGACTCAGCGGGCG TGGAGGTCGCGGCTGAGCGAGCGAGCCCTGGGCGAGTGAATTGTGGCTGTGGGTTGACGGTGGAGACACCCCCCGGAGGGAGGCGGAGGG AAGGGAGGCGAGGCCTGCACCTGCATGCTTCCCGCCTCCCACTCCCCAGCGCCCCCGGACCGTGCAGTTCTCTGCAGGACCAGGCCATGG AGCTCGAAGTCCGGCGGGTCCGACAGGCGTTCCTGTCCGGCCGGTCGCGACCTCTGCGGTTTCGGCTGCAGCAGCTGGAGGCCCTGCGGA GGATGGTGCAGGAGCGCGAGAAGGATATCCTGACGGCCATCGCCGCCGACCTGTGCAAGAGTGAATTCAATGTGTACAGTCAGGAAGTCA TTACTGTCCTTGGGGAAATTGATTTTATGCTTGAGAATCTTCCTGAATGGGTTACTGCTAAACCAGTTAAGAAGAACGTGCTCACCATGC TGGATGAGGCCTATATTCAGCCACAGCCTCTGGGAGTGGTGCTGATAATCGGAGCTTGGAATTACCCCTTCGTTCTCACCATTCAGCCAC TGATAGGAGCCATCGCTGCAGGAAATGCTGTGATTATAAAGCCTTCTGAACTGAGTGAAAATACAGCCAAGATCTTGGCAAAGCTTCTCC CTCAGTATTTAGACCAGGATCTCTATATTGTTATTAATGGTGGTGTTGAGGAAACCACGGAGCTCCTGAAGCAGCGATTTGACCACATTT TCTATACGGGAAACACTGCGGTTGGCAAAATTGTCATGGAAGCTGCTGCCAAGCATCTGACCCCTGTGACTCTTGAACTGGGAGGGAAAA GTCCATGTTATATTGATAAAGATTGTGACCTGGACATTGTTTGCAGACGCATAACCTGGGGAAAATACATGAATTGTGGCCAAACCTGCA TTGCACCCGACTATATTCTCTGTGAAGCATCCCTCCAAAATCAAATTGTATGGAAGATTAAGGAAACAGTGAAGGAATTTTATGGAGAAA ATATAAAAGAGTCTCCTGATTATGAAAGGATCATCAATCTTCGTCATTTTAAGAGGATACTAAGTTTGCTTGAAGGACAAAAGATAGCTT TTGGTGGGGAGACTGATGAGGCCACACGCTACATAGCCCCAACAGTACTTACCGATGTTGATCCTAAAACCAAGGTGATGCAAGAAGAAA TTTTTGGACCAATTCTTCCAATAGTGCCTGTGAAAAATGTAGATGAGGCCATAAATTTCATAAATGAACGTGAAAAGCCTCTGGCTCTTT ATGTATTTTCGCATAACCATAAGCTCATCAAACGGATGATTGATGAGACATCCAGTGGAGGTGTCACAGGCAATGACGTCATTATGCACT TCACGCTCAACTCTTTCCCATTTGGAGGAGTGGGTTCCAGTGGGATGGGAGCTTATCACGGAAAACATAGTTTTGATACTTTTTCTCATC AGCGTCCCTGTTTATTAAAAAGTTTAAAGAGAGAAGGTGCTAACAAACTCAGATATCCTCCCAACAGCCAGTCAAAGGTGGATTGGGGAA AATTTTTTCTCTTGAAACGGTTCAACAAAGAAAAACTCGGTCTCCTGTTGCTCACTTTCCTGGGTATTGTAGCCGCTGTGCTTGTCAAGT TGGAATCGAAGCCTCTTAAAATGGCAGATGACTTGGACTTCGAGACAGGAGATGCAGGGGCCTCAGCCACCTTCCCAATGCAGTGCTCAG CATTACGTAAGAATGGCTTTGTGGTGCTCAAAGGCCGGCCATGTAAGATCGTCGAGATGTCTACTTCGAAGACTGGCAAGCACGGCCACG CCAAGGTCCATCTGGTTGGTATTGACATCTTTACTGGGAAGAAATATGAAGATATCTGCCCGTCAACTCATAATATGGATGTCCCCAACA TCAAAAGGAATGACTTCCAGCTGATTGGCATCCAGGATGGGTACCTATCACTGCTCCAGGACAGCGGGGAGGTACGAGAGGACCTTCGTC TCCCTGAGGGAGACCTTGGCAAGGAGATTGAGCAGAAGTACGACTGTGGAGAAGAGATCCTGATCACGGTGCTGTCTGCCATGACAGAGG AGGCAGCTGTTGCAATCAAGGCCATGGCAAAATAACTGGCTCCCAGGGTGGCGGTGGTGGCAGCAGTGATCCTCTGAACCTGCAGAGGCC CCCTCCCCGAGCCTGGCCTGGCTCTGGCCCGGTCCTAAGCTGGACTCCTCCTACACAATTTATTTGACGTTTTATTTTGGTTTTCCCCAC CCCCTCAATCTGTCGGGGAGCCCCTGCCCTTCACCTAGCTCCCTTGGCCAGGAGCGAGCGAAGCTGTGGCCTTGGTGAAGCTGCCCTCCT CTTCTCCCCTCACACTACAGCCCTGGTGGGGGAGAAGGGGGTGGGTGCTGCTTGTGGTTTAGTCTTTTTTTTTTTTTTTTTTTTAATTCA ATCTGGAATCAGAAAGCGGTGGATTCTGGCAAATGGTCCTTGTGCCCTCCCCACTCATCCCTGGTCTGGTCCCCTGTTGCCTATAGCCCT TTACCCTGAGCACCACCCCAACAGACTGGGGACCAGCCCCCTCGCCTGCCTGTGTCTCTCCCCAAACCCCTTTAGATGGGGAGGGAAGAG GAGGAGAGGGGAGGGGACCTGCCCCCTCCTCAGGCATCTGGGAGGGCCCTGCCCCCATGGGCTTTACCCTTCCCTGCGGGCTCTCTCCCC >In-frame_ENST00000176643_ENST00000336452_TCGA-OR-A5KY-01A_ALDH3A2_chr17_19575269_+_EIF5A_chr17_7212934_length(amino acids)=720AA_start in transcript=212_stop in transcript=2374 MGRAQSSPGASDWQWDSAGVEVAAERASPGRVNCGCGLTVETPPGGRRREGRRGLHLHASRLPLPSAPGPCSSLQDQAMELEVRRVRQAF LSGRSRPLRFRLQQLEALRRMVQEREKDILTAIAADLCKSEFNVYSQEVITVLGEIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPL GVVLIIGAWNYPFVLTIQPLIGAIAAGNAVIIKPSELSENTAKILAKLLPQYLDQDLYIVINGGVEETTELLKQRFDHIFYTGNTAVGKI VMEAAAKHLTPVTLELGGKSPCYIDKDCDLDIVCRRITWGKYMNCGQTCIAPDYILCEASLQNQIVWKIKETVKEFYGENIKESPDYERI INLRHFKRILSLLEGQKIAFGGETDEATRYIAPTVLTDVDPKTKVMQEEIFGPILPIVPVKNVDEAINFINEREKPLALYVFSHNHKLIK RMIDETSSGGVTGNDVIMHFTLNSFPFGGVGSSGMGAYHGKHSFDTFSHQRPCLLKSLKREGANKLRYPPNSQSKVDWGKFFLLKRFNKE KLGLLLLTFLGIVAAVLVKLESKPLKMADDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIF TGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVREDLRLPEGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIKAMAK -------------------------------------------------------------- >In-frame_ENST00000581518_ENST00000336452_TCGA-OR-A5KY-01A_ALDH3A2_chr17_19575269_+_EIF5A_chr17_7212934_length(transcript)=2823nt_BP=1692nt AATAGGGGTGAGGCTTTGGGTCGAGCTCAGTCCTCCCCCGGCGCCTCCGACTGGCAGTGGGACTCAGCGGGCGTGGAGGTCGCGGCTGAG CGAGCGAGCCCTGGGCGAGTGAATTGTGGCTGTGGGTTGACGGTGGAGACACCCCCCGGAGGGAGGCGGAGGGAAGGGAGGCGAGGCCTG CACCTGCATGCTTCCCGCCTCCCACTCCCCAGCGCCCCCGGACCGTGCAGTTCTCTGCAGGACCAGGCCATGGAGCTCGAAGTCCGGCGG GTCCGACAGGCGTTCCTGTCCGGCCGGTCGCGACCTCTGCGGTTTCGGCTGCAGCAGCTGGAGGCCCTGCGGAGGATGGTGCAGGAGCGC GAGAAGGATATCCTGACGGCCATCGCCGCCGACCTGTGCAAGAGTGAATTCAATGTGTACAGTCAGGAAGTCATTACTGTCCTTGGGGAA ATTGATTTTATGCTTGAGAATCTTCCTGAATGGGTTACTGCTAAACCAGTTAAGAAGAACGTGCTCACCATGCTGGATGAGGCCTATATT CAGCCACAGCCTCTGGGAGTGGTGCTGATAATCGGAGCTTGGAATTACCCCTTCGTTCTCACCATTCAGCCACTGATAGGAGCCATCGCT GCAGGAAATGCTGTGATTATAAAGCCTTCTGAACTGAGTGAAAATACAGCCAAGATCTTGGCAAAGCTTCTCCCTCAGTATTTAGACCAG GATCTCTATATTGTTATTAATGGTGGTGTTGAGGAAACCACGGAGCTCCTGAAGCAGCGATTTGACCACATTTTCTATACGGGAAACACT GCGGTTGGCAAAATTGTCATGGAAGCTGCTGCCAAGCATCTGACCCCTGTGACTCTTGAACTGGGAGGGAAAAGTCCATGTTATATTGAT AAAGATTGTGACCTGGACATTGTTTGCAGACGCATAACCTGGGGAAAATACATGAATTGTGGCCAAACCTGCATTGCACCCGACTATATT CTCTGTGAAGCATCCCTCCAAAATCAAATTGTATGGAAGATTAAGGAAACAGTGAAGGAATTTTATGGAGAAAATATAAAAGAGTCTCCT GATTATGAAAGGATCATCAATCTTCGTCATTTTAAGAGGATACTAAGTTTGCTTGAAGGACAAAAGATAGCTTTTGGTGGGGAGACTGAT GAGGCCACACGCTACATAGCCCCAACAGTACTTACCGATGTTGATCCTAAAACCAAGGTGATGCAAGAAGAAATTTTTGGACCAATTCTT CCAATAGTGCCTGTGAAAAATGTAGATGAGGCCATAAATTTCATAAATGAACGTGAAAAGCCTCTGGCTCTTTATGTATTTTCGCATAAC CATAAGCTCATCAAACGGATGATTGATGAGACATCCAGTGGAGGTGTCACAGGCAATGACGTCATTATGCACTTCACGCTCAACTCTTTC CCATTTGGAGGAGTGGGTTCCAGTGGGATGGGAGCTTATCACGGAAAACATAGTTTTGATACTTTTTCTCATCAGCGTCCCTGTTTATTA AAAAGTTTAAAGAGAGAAGGTGCTAACAAACTCAGATATCCTCCCAACAGCCAGTCAAAGGTGGATTGGGGAAAATTTTTTCTCTTGAAA CGGTTCAACAAAGAAAAACTCGGTCTCCTGTTGCTCACTTTCCTGGGTATTGTAGCCGCTGTGCTTGTCAAGTTGGAATCGAAGCCTCTT AAAATGGCAGATGACTTGGACTTCGAGACAGGAGATGCAGGGGCCTCAGCCACCTTCCCAATGCAGTGCTCAGCATTACGTAAGAATGGC TTTGTGGTGCTCAAAGGCCGGCCATGTAAGATCGTCGAGATGTCTACTTCGAAGACTGGCAAGCACGGCCACGCCAAGGTCCATCTGGTT GGTATTGACATCTTTACTGGGAAGAAATATGAAGATATCTGCCCGTCAACTCATAATATGGATGTCCCCAACATCAAAAGGAATGACTTC CAGCTGATTGGCATCCAGGATGGGTACCTATCACTGCTCCAGGACAGCGGGGAGGTACGAGAGGACCTTCGTCTCCCTGAGGGAGACCTT GGCAAGGAGATTGAGCAGAAGTACGACTGTGGAGAAGAGATCCTGATCACGGTGCTGTCTGCCATGACAGAGGAGGCAGCTGTTGCAATC AAGGCCATGGCAAAATAACTGGCTCCCAGGGTGGCGGTGGTGGCAGCAGTGATCCTCTGAACCTGCAGAGGCCCCCTCCCCGAGCCTGGC CTGGCTCTGGCCCGGTCCTAAGCTGGACTCCTCCTACACAATTTATTTGACGTTTTATTTTGGTTTTCCCCACCCCCTCAATCTGTCGGG GAGCCCCTGCCCTTCACCTAGCTCCCTTGGCCAGGAGCGAGCGAAGCTGTGGCCTTGGTGAAGCTGCCCTCCTCTTCTCCCCTCACACTA CAGCCCTGGTGGGGGAGAAGGGGGTGGGTGCTGCTTGTGGTTTAGTCTTTTTTTTTTTTTTTTTTTTAATTCAATCTGGAATCAGAAAGC GGTGGATTCTGGCAAATGGTCCTTGTGCCCTCCCCACTCATCCCTGGTCTGGTCCCCTGTTGCCTATAGCCCTTTACCCTGAGCACCACC CCAACAGACTGGGGACCAGCCCCCTCGCCTGCCTGTGTCTCTCCCCAAACCCCTTTAGATGGGGAGGGAAGAGGAGGAGAGGGGAGGGGA CCTGCCCCCTCCTCAGGCATCTGGGAGGGCCCTGCCCCCATGGGCTTTACCCTTCCCTGCGGGCTCTCTCCCCGACACATTTGTTAAAAT >In-frame_ENST00000581518_ENST00000336452_TCGA-OR-A5KY-01A_ALDH3A2_chr17_19575269_+_EIF5A_chr17_7212934_length(amino acids)=720AA_start in transcript=15_stop in transcript=2177 MGRAQSSPGASDWQWDSAGVEVAAERASPGRVNCGCGLTVETPPGGRRREGRRGLHLHASRLPLPSAPGPCSSLQDQAMELEVRRVRQAF LSGRSRPLRFRLQQLEALRRMVQEREKDILTAIAADLCKSEFNVYSQEVITVLGEIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPL GVVLIIGAWNYPFVLTIQPLIGAIAAGNAVIIKPSELSENTAKILAKLLPQYLDQDLYIVINGGVEETTELLKQRFDHIFYTGNTAVGKI VMEAAAKHLTPVTLELGGKSPCYIDKDCDLDIVCRRITWGKYMNCGQTCIAPDYILCEASLQNQIVWKIKETVKEFYGENIKESPDYERI INLRHFKRILSLLEGQKIAFGGETDEATRYIAPTVLTDVDPKTKVMQEEIFGPILPIVPVKNVDEAINFINEREKPLALYVFSHNHKLIK RMIDETSSGGVTGNDVIMHFTLNSFPFGGVGSSGMGAYHGKHSFDTFSHQRPCLLKSLKREGANKLRYPPNSQSKVDWGKFFLLKRFNKE KLGLLLLTFLGIVAAVLVKLESKPLKMADDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIF TGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVREDLRLPEGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIKAMAK -------------------------------------------------------------- >In-frame_ENST00000395575_ENST00000336452_TCGA-OR-A5KY-01A_ALDH3A2_chr17_19575269_+_EIF5A_chr17_7212934_length(transcript)=2732nt_BP=1601nt AATAGGGGTGAGGCTTTGGGTCGAGCTCAGTCCTCCCCCGGCGCCTCCGACTGGCAGTGGGACTCAGCGGGCGTGGAGGTCGCGGCTGAG CGAGCGAGCCCTGGGCGAGTGAATTGTGGCTCGCCCCCGGACCGTGCAGTTCTCTGCAGGACCAGGCCATGGAGCTCGAAGTCCGGCGGG TCCGACAGGCGTTCCTGTCCGGCCGGTCGCGACCTCTGCGGTTTCGGCTGCAGCAGCTGGAGGCCCTGCGGAGGATGGTGCAGGAGCGCG AGAAGGATATCCTGACGGCCATCGCCGCCGACCTGTGCAAGAGTGAATTCAATGTGTACAGTCAGGAAGTCATTACTGTCCTTGGGGAAA TTGATTTTATGCTTGAGAATCTTCCTGAATGGGTTACTGCTAAACCAGTTAAGAAGAACGTGCTCACCATGCTGGATGAGGCCTATATTC AGCCACAGCCTCTGGGAGTGGTGCTGATAATCGGAGCTTGGAATTACCCCTTCGTTCTCACCATTCAGCCACTGATAGGAGCCATCGCTG CAGGAAATGCTGTGATTATAAAGCCTTCTGAACTGAGTGAAAATACAGCCAAGATCTTGGCAAAGCTTCTCCCTCAGTATTTAGACCAGG ATCTCTATATTGTTATTAATGGTGGTGTTGAGGAAACCACGGAGCTCCTGAAGCAGCGATTTGACCACATTTTCTATACGGGAAACACTG CGGTTGGCAAAATTGTCATGGAAGCTGCTGCCAAGCATCTGACCCCTGTGACTCTTGAACTGGGAGGGAAAAGTCCATGTTATATTGATA AAGATTGTGACCTGGACATTGTTTGCAGACGCATAACCTGGGGAAAATACATGAATTGTGGCCAAACCTGCATTGCACCCGACTATATTC TCTGTGAAGCATCCCTCCAAAATCAAATTGTATGGAAGATTAAGGAAACAGTGAAGGAATTTTATGGAGAAAATATAAAAGAGTCTCCTG ATTATGAAAGGATCATCAATCTTCGTCATTTTAAGAGGATACTAAGTTTGCTTGAAGGACAAAAGATAGCTTTTGGTGGGGAGACTGATG AGGCCACACGCTACATAGCCCCAACAGTACTTACCGATGTTGATCCTAAAACCAAGGTGATGCAAGAAGAAATTTTTGGACCAATTCTTC CAATAGTGCCTGTGAAAAATGTAGATGAGGCCATAAATTTCATAAATGAACGTGAAAAGCCTCTGGCTCTTTATGTATTTTCGCATAACC ATAAGCTCATCAAACGGATGATTGATGAGACATCCAGTGGAGGTGTCACAGGCAATGACGTCATTATGCACTTCACGCTCAACTCTTTCC CATTTGGAGGAGTGGGTTCCAGTGGGATGGGAGCTTATCACGGAAAACATAGTTTTGATACTTTTTCTCATCAGCGTCCCTGTTTATTAA AAAGTTTAAAGAGAGAAGGTGCTAACAAACTCAGATATCCTCCCAACAGCCAGTCAAAGGTGGATTGGGGAAAATTTTTTCTCTTGAAAC GGTTCAACAAAGAAAAACTCGGTCTCCTGTTGCTCACTTTCCTGGGTATTGTAGCCGCTGTGCTTGTCAAGTTGGAATCGAAGCCTCTTA AAATGGCAGATGACTTGGACTTCGAGACAGGAGATGCAGGGGCCTCAGCCACCTTCCCAATGCAGTGCTCAGCATTACGTAAGAATGGCT TTGTGGTGCTCAAAGGCCGGCCATGTAAGATCGTCGAGATGTCTACTTCGAAGACTGGCAAGCACGGCCACGCCAAGGTCCATCTGGTTG GTATTGACATCTTTACTGGGAAGAAATATGAAGATATCTGCCCGTCAACTCATAATATGGATGTCCCCAACATCAAAAGGAATGACTTCC AGCTGATTGGCATCCAGGATGGGTACCTATCACTGCTCCAGGACAGCGGGGAGGTACGAGAGGACCTTCGTCTCCCTGAGGGAGACCTTG GCAAGGAGATTGAGCAGAAGTACGACTGTGGAGAAGAGATCCTGATCACGGTGCTGTCTGCCATGACAGAGGAGGCAGCTGTTGCAATCA AGGCCATGGCAAAATAACTGGCTCCCAGGGTGGCGGTGGTGGCAGCAGTGATCCTCTGAACCTGCAGAGGCCCCCTCCCCGAGCCTGGCC TGGCTCTGGCCCGGTCCTAAGCTGGACTCCTCCTACACAATTTATTTGACGTTTTATTTTGGTTTTCCCCACCCCCTCAATCTGTCGGGG AGCCCCTGCCCTTCACCTAGCTCCCTTGGCCAGGAGCGAGCGAAGCTGTGGCCTTGGTGAAGCTGCCCTCCTCTTCTCCCCTCACACTAC AGCCCTGGTGGGGGAGAAGGGGGTGGGTGCTGCTTGTGGTTTAGTCTTTTTTTTTTTTTTTTTTTTAATTCAATCTGGAATCAGAAAGCG GTGGATTCTGGCAAATGGTCCTTGTGCCCTCCCCACTCATCCCTGGTCTGGTCCCCTGTTGCCTATAGCCCTTTACCCTGAGCACCACCC CAACAGACTGGGGACCAGCCCCCTCGCCTGCCTGTGTCTCTCCCCAAACCCCTTTAGATGGGGAGGGAAGAGGAGGAGAGGGGAGGGGAC CTGCCCCCTCCTCAGGCATCTGGGAGGGCCCTGCCCCCATGGGCTTTACCCTTCCCTGCGGGCTCTCTCCCCGACACATTTGTTAAAATC >In-frame_ENST00000395575_ENST00000336452_TCGA-OR-A5KY-01A_ALDH3A2_chr17_19575269_+_EIF5A_chr17_7212934_length(amino acids)=657AA_start in transcript=113_stop in transcript=2086 MWLAPGPCSSLQDQAMELEVRRVRQAFLSGRSRPLRFRLQQLEALRRMVQEREKDILTAIAADLCKSEFNVYSQEVITVLGEIDFMLENL PEWVTAKPVKKNVLTMLDEAYIQPQPLGVVLIIGAWNYPFVLTIQPLIGAIAAGNAVIIKPSELSENTAKILAKLLPQYLDQDLYIVING GVEETTELLKQRFDHIFYTGNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDKDCDLDIVCRRITWGKYMNCGQTCIAPDYILCEASLQN QIVWKIKETVKEFYGENIKESPDYERIINLRHFKRILSLLEGQKIAFGGETDEATRYIAPTVLTDVDPKTKVMQEEIFGPILPIVPVKNV DEAINFINEREKPLALYVFSHNHKLIKRMIDETSSGGVTGNDVIMHFTLNSFPFGGVGSSGMGAYHGKHSFDTFSHQRPCLLKSLKREGA NKLRYPPNSQSKVDWGKFFLLKRFNKEKLGLLLLTFLGIVAAVLVKLESKPLKMADDLDFETGDAGASATFPMQCSALRKNGFVVLKGRP CKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVREDLRLPEGDLGKEIEQKY -------------------------------------------------------------- >In-frame_ENST00000339618_ENST00000336452_TCGA-OR-A5KY-01A_ALDH3A2_chr17_19575269_+_EIF5A_chr17_7212934_length(transcript)=2795nt_BP=1664nt AGTCCTCCCCCGGCGCCTCCGACTGGCAGTGGGACTCAGCGGGCGTGGAGGTCGCGGCTGAGCGAGCGAGCCCTGGGCGAGTGAATTGTG GCTGTGGGTTGACGGTGGAGACACCCCCCGGAGGGAGGCGGAGGGAAGGGAGGCGAGGCCTGCACCTGCATGCTTCCCGCCTCCCACTCC CCAGCGCCCCCGGACCGTGCAGTTCTCTGCAGGACCAGGCCATGGAGCTCGAAGTCCGGCGGGTCCGACAGGCGTTCCTGTCCGGCCGGT CGCGACCTCTGCGGTTTCGGCTGCAGCAGCTGGAGGCCCTGCGGAGGATGGTGCAGGAGCGCGAGAAGGATATCCTGACGGCCATCGCCG CCGACCTGTGCAAGAGTGAATTCAATGTGTACAGTCAGGAAGTCATTACTGTCCTTGGGGAAATTGATTTTATGCTTGAGAATCTTCCTG AATGGGTTACTGCTAAACCAGTTAAGAAGAACGTGCTCACCATGCTGGATGAGGCCTATATTCAGCCACAGCCTCTGGGAGTGGTGCTGA TAATCGGAGCTTGGAATTACCCCTTCGTTCTCACCATTCAGCCACTGATAGGAGCCATCGCTGCAGGAAATGCTGTGATTATAAAGCCTT CTGAACTGAGTGAAAATACAGCCAAGATCTTGGCAAAGCTTCTCCCTCAGTATTTAGACCAGGATCTCTATATTGTTATTAATGGTGGTG TTGAGGAAACCACGGAGCTCCTGAAGCAGCGATTTGACCACATTTTCTATACGGGAAACACTGCGGTTGGCAAAATTGTCATGGAAGCTG CTGCCAAGCATCTGACCCCTGTGACTCTTGAACTGGGAGGGAAAAGTCCATGTTATATTGATAAAGATTGTGACCTGGACATTGTTTGCA GACGCATAACCTGGGGAAAATACATGAATTGTGGCCAAACCTGCATTGCACCCGACTATATTCTCTGTGAAGCATCCCTCCAAAATCAAA TTGTATGGAAGATTAAGGAAACAGTGAAGGAATTTTATGGAGAAAATATAAAAGAGTCTCCTGATTATGAAAGGATCATCAATCTTCGTC ATTTTAAGAGGATACTAAGTTTGCTTGAAGGACAAAAGATAGCTTTTGGTGGGGAGACTGATGAGGCCACACGCTACATAGCCCCAACAG TACTTACCGATGTTGATCCTAAAACCAAGGTGATGCAAGAAGAAATTTTTGGACCAATTCTTCCAATAGTGCCTGTGAAAAATGTAGATG AGGCCATAAATTTCATAAATGAACGTGAAAAGCCTCTGGCTCTTTATGTATTTTCGCATAACCATAAGCTCATCAAACGGATGATTGATG AGACATCCAGTGGAGGTGTCACAGGCAATGACGTCATTATGCACTTCACGCTCAACTCTTTCCCATTTGGAGGAGTGGGTTCCAGTGGGA TGGGAGCTTATCACGGAAAACATAGTTTTGATACTTTTTCTCATCAGCGTCCCTGTTTATTAAAAAGTTTAAAGAGAGAAGGTGCTAACA AACTCAGATATCCTCCCAACAGCCAGTCAAAGGTGGATTGGGGAAAATTTTTTCTCTTGAAACGGTTCAACAAAGAAAAACTCGGTCTCC TGTTGCTCACTTTCCTGGGTATTGTAGCCGCTGTGCTTGTCAAGTTGGAATCGAAGCCTCTTAAAATGGCAGATGACTTGGACTTCGAGA CAGGAGATGCAGGGGCCTCAGCCACCTTCCCAATGCAGTGCTCAGCATTACGTAAGAATGGCTTTGTGGTGCTCAAAGGCCGGCCATGTA AGATCGTCGAGATGTCTACTTCGAAGACTGGCAAGCACGGCCACGCCAAGGTCCATCTGGTTGGTATTGACATCTTTACTGGGAAGAAAT ATGAAGATATCTGCCCGTCAACTCATAATATGGATGTCCCCAACATCAAAAGGAATGACTTCCAGCTGATTGGCATCCAGGATGGGTACC TATCACTGCTCCAGGACAGCGGGGAGGTACGAGAGGACCTTCGTCTCCCTGAGGGAGACCTTGGCAAGGAGATTGAGCAGAAGTACGACT GTGGAGAAGAGATCCTGATCACGGTGCTGTCTGCCATGACAGAGGAGGCAGCTGTTGCAATCAAGGCCATGGCAAAATAACTGGCTCCCA GGGTGGCGGTGGTGGCAGCAGTGATCCTCTGAACCTGCAGAGGCCCCCTCCCCGAGCCTGGCCTGGCTCTGGCCCGGTCCTAAGCTGGAC TCCTCCTACACAATTTATTTGACGTTTTATTTTGGTTTTCCCCACCCCCTCAATCTGTCGGGGAGCCCCTGCCCTTCACCTAGCTCCCTT GGCCAGGAGCGAGCGAAGCTGTGGCCTTGGTGAAGCTGCCCTCCTCTTCTCCCCTCACACTACAGCCCTGGTGGGGGAGAAGGGGGTGGG TGCTGCTTGTGGTTTAGTCTTTTTTTTTTTTTTTTTTTTAATTCAATCTGGAATCAGAAAGCGGTGGATTCTGGCAAATGGTCCTTGTGC CCTCCCCACTCATCCCTGGTCTGGTCCCCTGTTGCCTATAGCCCTTTACCCTGAGCACCACCCCAACAGACTGGGGACCAGCCCCCTCGC CTGCCTGTGTCTCTCCCCAAACCCCTTTAGATGGGGAGGGAAGAGGAGGAGAGGGGAGGGGACCTGCCCCCTCCTCAGGCATCTGGGAGG GCCCTGCCCCCATGGGCTTTACCCTTCCCTGCGGGCTCTCTCCCCGACACATTTGTTAAAATCAAACCTGAATAAAACTACAAGTTTAAT >In-frame_ENST00000339618_ENST00000336452_TCGA-OR-A5KY-01A_ALDH3A2_chr17_19575269_+_EIF5A_chr17_7212934_length(amino acids)=683AA_start in transcript=98_stop in transcript=2149 MTVETPPGGRRREGRRGLHLHASRLPLPSAPGPCSSLQDQAMELEVRRVRQAFLSGRSRPLRFRLQQLEALRRMVQEREKDILTAIAADL CKSEFNVYSQEVITVLGEIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPLGVVLIIGAWNYPFVLTIQPLIGAIAAGNAVIIKPSEL SENTAKILAKLLPQYLDQDLYIVINGGVEETTELLKQRFDHIFYTGNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDKDCDLDIVCRRI TWGKYMNCGQTCIAPDYILCEASLQNQIVWKIKETVKEFYGENIKESPDYERIINLRHFKRILSLLEGQKIAFGGETDEATRYIAPTVLT DVDPKTKVMQEEIFGPILPIVPVKNVDEAINFINEREKPLALYVFSHNHKLIKRMIDETSSGGVTGNDVIMHFTLNSFPFGGVGSSGMGA YHGKHSFDTFSHQRPCLLKSLKREGANKLRYPPNSQSKVDWGKFFLLKRFNKEKLGLLLLTFLGIVAAVLVKLESKPLKMADDLDFETGD AGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSL -------------------------------------------------------------- >In-frame_ENST00000579855_ENST00000336452_TCGA-OR-A5KY-01A_ALDH3A2_chr17_19575269_+_EIF5A_chr17_7212934_length(transcript)=2673nt_BP=1542nt AGTCCTCCCCCGGCGCCTCCGACTGGCAGTGGGACTCAGCGGGCGTGGAGGTCGCGGCTGAGCGAGCGAGCCCTGGGCGATTCTCTGCAG GACCAGGCCATGGAGCTCGAAGTCCGGCGGGTCCGACAGGCGTTCCTGTCCGGCCGGTCGCGACCTCTGCGGTTTCGGCTGCAGCAGCTG GAGGCCCTGCGGAGGATGGTGCAGGAGCGCGAGAAGGATATCCTGACGGCCATCGCCGCCGACCTGTGCAAGAGTGAATTCAATGTGTAC AGTCAGGAAGTCATTACTGTCCTTGGGGAAATTGATTTTATGCTTGAGAATCTTCCTGAATGGGTTACTGCTAAACCAGTTAAGAAGAAC GTGCTCACCATGCTGGATGAGGCCTATATTCAGCCACAGCCTCTGGGAGTGGTGCTGATAATCGGAGCTTGGAATTACCCCTTCGTTCTC ACCATTCAGCCACTGATAGGAGCCATCGCTGCAGGAAATGCTGTGATTATAAAGCCTTCTGAACTGAGTGAAAATACAGCCAAGATCTTG GCAAAGCTTCTCCCTCAGTATTTAGACCAGGATCTCTATATTGTTATTAATGGTGGTGTTGAGGAAACCACGGAGCTCCTGAAGCAGCGA TTTGACCACATTTTCTATACGGGAAACACTGCGGTTGGCAAAATTGTCATGGAAGCTGCTGCCAAGCATCTGACCCCTGTGACTCTTGAA CTGGGAGGGAAAAGTCCATGTTATATTGATAAAGATTGTGACCTGGACATTGTTTGCAGACGCATAACCTGGGGAAAATACATGAATTGT GGCCAAACCTGCATTGCACCCGACTATATTCTCTGTGAAGCATCCCTCCAAAATCAAATTGTATGGAAGATTAAGGAAACAGTGAAGGAA TTTTATGGAGAAAATATAAAAGAGTCTCCTGATTATGAAAGGATCATCAATCTTCGTCATTTTAAGAGGATACTAAGTTTGCTTGAAGGA CAAAAGATAGCTTTTGGTGGGGAGACTGATGAGGCCACACGCTACATAGCCCCAACAGTACTTACCGATGTTGATCCTAAAACCAAGGTG ATGCAAGAAGAAATTTTTGGACCAATTCTTCCAATAGTGCCTGTGAAAAATGTAGATGAGGCCATAAATTTCATAAATGAACGTGAAAAG CCTCTGGCTCTTTATGTATTTTCGCATAACCATAAGCTCATCAAACGGATGATTGATGAGACATCCAGTGGAGGTGTCACAGGCAATGAC GTCATTATGCACTTCACGCTCAACTCTTTCCCATTTGGAGGAGTGGGTTCCAGTGGGATGGGAGCTTATCACGGAAAACATAGTTTTGAT ACTTTTTCTCATCAGCGTCCCTGTTTATTAAAAAGTTTAAAGAGAGAAGGTGCTAACAAACTCAGATATCCTCCCAACAGCCAGTCAAAG GTGGATTGGGGAAAATTTTTTCTCTTGAAACGGTTCAACAAAGAAAAACTCGGTCTCCTGTTGCTCACTTTCCTGGGTATTGTAGCCGCT GTGCTTGTCAAGTTGGAATCGAAGCCTCTTAAAATGGCAGATGACTTGGACTTCGAGACAGGAGATGCAGGGGCCTCAGCCACCTTCCCA ATGCAGTGCTCAGCATTACGTAAGAATGGCTTTGTGGTGCTCAAAGGCCGGCCATGTAAGATCGTCGAGATGTCTACTTCGAAGACTGGC AAGCACGGCCACGCCAAGGTCCATCTGGTTGGTATTGACATCTTTACTGGGAAGAAATATGAAGATATCTGCCCGTCAACTCATAATATG GATGTCCCCAACATCAAAAGGAATGACTTCCAGCTGATTGGCATCCAGGATGGGTACCTATCACTGCTCCAGGACAGCGGGGAGGTACGA GAGGACCTTCGTCTCCCTGAGGGAGACCTTGGCAAGGAGATTGAGCAGAAGTACGACTGTGGAGAAGAGATCCTGATCACGGTGCTGTCT GCCATGACAGAGGAGGCAGCTGTTGCAATCAAGGCCATGGCAAAATAACTGGCTCCCAGGGTGGCGGTGGTGGCAGCAGTGATCCTCTGA ACCTGCAGAGGCCCCCTCCCCGAGCCTGGCCTGGCTCTGGCCCGGTCCTAAGCTGGACTCCTCCTACACAATTTATTTGACGTTTTATTT TGGTTTTCCCCACCCCCTCAATCTGTCGGGGAGCCCCTGCCCTTCACCTAGCTCCCTTGGCCAGGAGCGAGCGAAGCTGTGGCCTTGGTG AAGCTGCCCTCCTCTTCTCCCCTCACACTACAGCCCTGGTGGGGGAGAAGGGGGTGGGTGCTGCTTGTGGTTTAGTCTTTTTTTTTTTTT TTTTTTTAATTCAATCTGGAATCAGAAAGCGGTGGATTCTGGCAAATGGTCCTTGTGCCCTCCCCACTCATCCCTGGTCTGGTCCCCTGT TGCCTATAGCCCTTTACCCTGAGCACCACCCCAACAGACTGGGGACCAGCCCCCTCGCCTGCCTGTGTCTCTCCCCAAACCCCTTTAGAT GGGGAGGGAAGAGGAGGAGAGGGGAGGGGACCTGCCCCCTCCTCAGGCATCTGGGAGGGCCCTGCCCCCATGGGCTTTACCCTTCCCTGC >In-frame_ENST00000579855_ENST00000336452_TCGA-OR-A5KY-01A_ALDH3A2_chr17_19575269_+_EIF5A_chr17_7212934_length(amino acids)=656AA_start in transcript=57_stop in transcript=2027 MSERALGDSLQDQAMELEVRRVRQAFLSGRSRPLRFRLQQLEALRRMVQEREKDILTAIAADLCKSEFNVYSQEVITVLGEIDFMLENLP EWVTAKPVKKNVLTMLDEAYIQPQPLGVVLIIGAWNYPFVLTIQPLIGAIAAGNAVIIKPSELSENTAKILAKLLPQYLDQDLYIVINGG VEETTELLKQRFDHIFYTGNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDKDCDLDIVCRRITWGKYMNCGQTCIAPDYILCEASLQNQ IVWKIKETVKEFYGENIKESPDYERIINLRHFKRILSLLEGQKIAFGGETDEATRYIAPTVLTDVDPKTKVMQEEIFGPILPIVPVKNVD EAINFINEREKPLALYVFSHNHKLIKRMIDETSSGGVTGNDVIMHFTLNSFPFGGVGSSGMGAYHGKHSFDTFSHQRPCLLKSLKREGAN KLRYPPNSQSKVDWGKFFLLKRFNKEKLGLLLLTFLGIVAAVLVKLESKPLKMADDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPC KIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVREDLRLPEGDLGKEIEQKYD -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for ALDH3A2-EIF5A |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for ALDH3A2-EIF5A |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Hgene | ALDH3A2 | P51648 | DB00157 | NADH | Small molecule | Approved|Nutraceutical | |
Hgene | ALDH3A2 | P51648 | DB00157 | NADH | Small molecule | Approved|Nutraceutical | |
Hgene | ALDH3A2 | P51648 | DB00157 | NADH | Small molecule | Approved|Nutraceutical |
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Related Diseases for ALDH3A2-EIF5A |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | ALDH3A2 | C0037231 | Sjogren-Larsson Syndrome | 9 | CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT |
Hgene | ALDH3A2 | C3714756 | Intellectual Disability | 1 | GENOMICS_ENGLAND |
Tgene | EIF5A | C0007097 | Carcinoma | 1 | CTD_human |
Tgene | EIF5A | C0022548 | Keloid | 1 | CTD_human |
Tgene | EIF5A | C0024667 | Animal Mammary Neoplasms | 1 | CTD_human |
Tgene | EIF5A | C0024668 | Mammary Neoplasms, Experimental | 1 | CTD_human |
Tgene | EIF5A | C0205696 | Anaplastic carcinoma | 1 | CTD_human |
Tgene | EIF5A | C0205697 | Carcinoma, Spindle-Cell | 1 | CTD_human |
Tgene | EIF5A | C0205698 | Undifferentiated carcinoma | 1 | CTD_human |
Tgene | EIF5A | C0205699 | Carcinomatosis | 1 | CTD_human |
Tgene | EIF5A | C1257925 | Mammary Carcinoma, Animal | 1 | CTD_human |