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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:JMJD1C-CTNNA3 (FusionGDB2 ID:40779) |
Fusion Gene Summary for JMJD1C-CTNNA3 |
Fusion gene summary |
Fusion gene information | Fusion gene name: JMJD1C-CTNNA3 | Fusion gene ID: 40779 | Hgene | Tgene | Gene symbol | JMJD1C | CTNNA3 | Gene ID | 221037 | 29119 |
Gene name | jumonji domain containing 1C | catenin alpha 3 | |
Synonyms | KDM3C|TRIP-8|TRIP8 | ARVD13|VR22 | |
Cytomap | 10q21.3 | 10q21.3 | |
Type of gene | protein-coding | protein-coding | |
Description | probable JmjC domain-containing histone demethylation protein 2CTR-interacting protein 8thyroid hormone receptor interactor 8thyroid receptor-interacting protein 8 | catenin alpha-3alpha-T-cateninalpha-catenin-like proteincatenin (cadherin-associated protein), alpha 3 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | Q15652 | Q9UI47 | |
Ensembl transtripts involved in fusion gene | ENST00000399262, ENST00000402544, ENST00000399251, ENST00000542921, ENST00000489372, | ENST00000433211, ENST00000373744, ENST00000545309, ENST00000373735, | |
Fusion gene scores | * DoF score | 29 X 18 X 10=5220 | 23 X 20 X 6=2760 |
# samples | 31 | 25 | |
** MAII score | log2(31/5220*10)=-4.07370968618301 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(25/2760*10)=-3.46466826700344 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: JMJD1C [Title/Abstract] AND CTNNA3 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | JMJD1C(65140078)-CTNNA3(68535282), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene breakpoints across JMJD1C (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across CTNNA3 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | OV | TCGA-20-1684-01A | JMJD1C | chr10 | 65140078 | - | CTNNA3 | chr10 | 68535282 | - |
ChimerDB4 | OV | TCGA-13-0891 | JMJD1C | chr10 | 65024410 | - | CTNNA3 | chr10 | 68979628 | - |
ChimerDB4 | OV | TCGA-20-1684-01A | JMJD1C | chr10 | 65140078 | - | CTNNA3 | chr10 | 68535282 | - |
ChimerDB4 | OV | TCGA-13-0891-01A | JMJD1C | chr10 | 65024411 | - | CTNNA3 | chr10 | 68979628 | - |
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Fusion Gene ORF analysis for JMJD1C-CTNNA3 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000399262 | ENST00000433211 | JMJD1C | chr10 | 65140078 | - | CTNNA3 | chr10 | 68535282 | - |
In-frame | ENST00000399262 | ENST00000373744 | JMJD1C | chr10 | 65140078 | - | CTNNA3 | chr10 | 68535282 | - |
5CDS-intron | ENST00000399262 | ENST00000545309 | JMJD1C | chr10 | 65140078 | - | CTNNA3 | chr10 | 68535282 | - |
5CDS-intron | ENST00000399262 | ENST00000373735 | JMJD1C | chr10 | 65140078 | - | CTNNA3 | chr10 | 68535282 | - |
intron-3CDS | ENST00000402544 | ENST00000433211 | JMJD1C | chr10 | 65140078 | - | CTNNA3 | chr10 | 68535282 | - |
intron-3CDS | ENST00000402544 | ENST00000373744 | JMJD1C | chr10 | 65140078 | - | CTNNA3 | chr10 | 68535282 | - |
intron-intron | ENST00000402544 | ENST00000545309 | JMJD1C | chr10 | 65140078 | - | CTNNA3 | chr10 | 68535282 | - |
intron-intron | ENST00000402544 | ENST00000373735 | JMJD1C | chr10 | 65140078 | - | CTNNA3 | chr10 | 68535282 | - |
5UTR-3CDS | ENST00000399251 | ENST00000433211 | JMJD1C | chr10 | 65140078 | - | CTNNA3 | chr10 | 68535282 | - |
5UTR-3CDS | ENST00000399251 | ENST00000373744 | JMJD1C | chr10 | 65140078 | - | CTNNA3 | chr10 | 68535282 | - |
5UTR-intron | ENST00000399251 | ENST00000545309 | JMJD1C | chr10 | 65140078 | - | CTNNA3 | chr10 | 68535282 | - |
5UTR-intron | ENST00000399251 | ENST00000373735 | JMJD1C | chr10 | 65140078 | - | CTNNA3 | chr10 | 68535282 | - |
intron-3CDS | ENST00000542921 | ENST00000433211 | JMJD1C | chr10 | 65140078 | - | CTNNA3 | chr10 | 68535282 | - |
intron-3CDS | ENST00000542921 | ENST00000373744 | JMJD1C | chr10 | 65140078 | - | CTNNA3 | chr10 | 68535282 | - |
intron-intron | ENST00000542921 | ENST00000545309 | JMJD1C | chr10 | 65140078 | - | CTNNA3 | chr10 | 68535282 | - |
intron-intron | ENST00000542921 | ENST00000373735 | JMJD1C | chr10 | 65140078 | - | CTNNA3 | chr10 | 68535282 | - |
intron-3CDS | ENST00000489372 | ENST00000433211 | JMJD1C | chr10 | 65140078 | - | CTNNA3 | chr10 | 68535282 | - |
intron-3CDS | ENST00000489372 | ENST00000373744 | JMJD1C | chr10 | 65140078 | - | CTNNA3 | chr10 | 68535282 | - |
intron-intron | ENST00000489372 | ENST00000545309 | JMJD1C | chr10 | 65140078 | - | CTNNA3 | chr10 | 68535282 | - |
intron-intron | ENST00000489372 | ENST00000373735 | JMJD1C | chr10 | 65140078 | - | CTNNA3 | chr10 | 68535282 | - |
In-frame | ENST00000399262 | ENST00000433211 | JMJD1C | chr10 | 65024410 | - | CTNNA3 | chr10 | 68979628 | - |
In-frame | ENST00000399262 | ENST00000373744 | JMJD1C | chr10 | 65024410 | - | CTNNA3 | chr10 | 68979628 | - |
In-frame | ENST00000399262 | ENST00000545309 | JMJD1C | chr10 | 65024410 | - | CTNNA3 | chr10 | 68979628 | - |
5CDS-intron | ENST00000399262 | ENST00000373735 | JMJD1C | chr10 | 65024410 | - | CTNNA3 | chr10 | 68979628 | - |
intron-3CDS | ENST00000402544 | ENST00000433211 | JMJD1C | chr10 | 65024410 | - | CTNNA3 | chr10 | 68979628 | - |
intron-3CDS | ENST00000402544 | ENST00000373744 | JMJD1C | chr10 | 65024410 | - | CTNNA3 | chr10 | 68979628 | - |
intron-3CDS | ENST00000402544 | ENST00000545309 | JMJD1C | chr10 | 65024410 | - | CTNNA3 | chr10 | 68979628 | - |
intron-intron | ENST00000402544 | ENST00000373735 | JMJD1C | chr10 | 65024410 | - | CTNNA3 | chr10 | 68979628 | - |
5UTR-3CDS | ENST00000399251 | ENST00000433211 | JMJD1C | chr10 | 65024410 | - | CTNNA3 | chr10 | 68979628 | - |
5UTR-3CDS | ENST00000399251 | ENST00000373744 | JMJD1C | chr10 | 65024410 | - | CTNNA3 | chr10 | 68979628 | - |
5UTR-3CDS | ENST00000399251 | ENST00000545309 | JMJD1C | chr10 | 65024410 | - | CTNNA3 | chr10 | 68979628 | - |
5UTR-intron | ENST00000399251 | ENST00000373735 | JMJD1C | chr10 | 65024410 | - | CTNNA3 | chr10 | 68979628 | - |
5UTR-3CDS | ENST00000542921 | ENST00000433211 | JMJD1C | chr10 | 65024410 | - | CTNNA3 | chr10 | 68979628 | - |
5UTR-3CDS | ENST00000542921 | ENST00000373744 | JMJD1C | chr10 | 65024410 | - | CTNNA3 | chr10 | 68979628 | - |
5UTR-3CDS | ENST00000542921 | ENST00000545309 | JMJD1C | chr10 | 65024410 | - | CTNNA3 | chr10 | 68979628 | - |
5UTR-intron | ENST00000542921 | ENST00000373735 | JMJD1C | chr10 | 65024410 | - | CTNNA3 | chr10 | 68979628 | - |
5UTR-3CDS | ENST00000489372 | ENST00000433211 | JMJD1C | chr10 | 65024410 | - | CTNNA3 | chr10 | 68979628 | - |
5UTR-3CDS | ENST00000489372 | ENST00000373744 | JMJD1C | chr10 | 65024410 | - | CTNNA3 | chr10 | 68979628 | - |
5UTR-3CDS | ENST00000489372 | ENST00000545309 | JMJD1C | chr10 | 65024410 | - | CTNNA3 | chr10 | 68979628 | - |
5UTR-intron | ENST00000489372 | ENST00000373735 | JMJD1C | chr10 | 65024410 | - | CTNNA3 | chr10 | 68979628 | - |
In-frame | ENST00000399262 | ENST00000433211 | JMJD1C | chr10 | 65024411 | - | CTNNA3 | chr10 | 68979628 | - |
In-frame | ENST00000399262 | ENST00000373744 | JMJD1C | chr10 | 65024411 | - | CTNNA3 | chr10 | 68979628 | - |
In-frame | ENST00000399262 | ENST00000545309 | JMJD1C | chr10 | 65024411 | - | CTNNA3 | chr10 | 68979628 | - |
5CDS-intron | ENST00000399262 | ENST00000373735 | JMJD1C | chr10 | 65024411 | - | CTNNA3 | chr10 | 68979628 | - |
intron-3CDS | ENST00000402544 | ENST00000433211 | JMJD1C | chr10 | 65024411 | - | CTNNA3 | chr10 | 68979628 | - |
intron-3CDS | ENST00000402544 | ENST00000373744 | JMJD1C | chr10 | 65024411 | - | CTNNA3 | chr10 | 68979628 | - |
intron-3CDS | ENST00000402544 | ENST00000545309 | JMJD1C | chr10 | 65024411 | - | CTNNA3 | chr10 | 68979628 | - |
intron-intron | ENST00000402544 | ENST00000373735 | JMJD1C | chr10 | 65024411 | - | CTNNA3 | chr10 | 68979628 | - |
5UTR-3CDS | ENST00000399251 | ENST00000433211 | JMJD1C | chr10 | 65024411 | - | CTNNA3 | chr10 | 68979628 | - |
5UTR-3CDS | ENST00000399251 | ENST00000373744 | JMJD1C | chr10 | 65024411 | - | CTNNA3 | chr10 | 68979628 | - |
5UTR-3CDS | ENST00000399251 | ENST00000545309 | JMJD1C | chr10 | 65024411 | - | CTNNA3 | chr10 | 68979628 | - |
5UTR-intron | ENST00000399251 | ENST00000373735 | JMJD1C | chr10 | 65024411 | - | CTNNA3 | chr10 | 68979628 | - |
5UTR-3CDS | ENST00000542921 | ENST00000433211 | JMJD1C | chr10 | 65024411 | - | CTNNA3 | chr10 | 68979628 | - |
5UTR-3CDS | ENST00000542921 | ENST00000373744 | JMJD1C | chr10 | 65024411 | - | CTNNA3 | chr10 | 68979628 | - |
5UTR-3CDS | ENST00000542921 | ENST00000545309 | JMJD1C | chr10 | 65024411 | - | CTNNA3 | chr10 | 68979628 | - |
5UTR-intron | ENST00000542921 | ENST00000373735 | JMJD1C | chr10 | 65024411 | - | CTNNA3 | chr10 | 68979628 | - |
5UTR-3CDS | ENST00000489372 | ENST00000433211 | JMJD1C | chr10 | 65024411 | - | CTNNA3 | chr10 | 68979628 | - |
5UTR-3CDS | ENST00000489372 | ENST00000373744 | JMJD1C | chr10 | 65024411 | - | CTNNA3 | chr10 | 68979628 | - |
5UTR-3CDS | ENST00000489372 | ENST00000545309 | JMJD1C | chr10 | 65024411 | - | CTNNA3 | chr10 | 68979628 | - |
5UTR-intron | ENST00000489372 | ENST00000373735 | JMJD1C | chr10 | 65024411 | - | CTNNA3 | chr10 | 68979628 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000399262 | JMJD1C | chr10 | 65140078 | - | ENST00000433211 | CTNNA3 | chr10 | 68535282 | - | 10005 | 552 | 183 | 2192 | 669 |
ENST00000399262 | JMJD1C | chr10 | 65140078 | - | ENST00000373744 | CTNNA3 | chr10 | 68535282 | - | 2504 | 552 | 183 | 2192 | 669 |
ENST00000399262 | JMJD1C | chr10 | 65024410 | - | ENST00000433211 | CTNNA3 | chr10 | 68979628 | - | 10587 | 666 | 183 | 2774 | 863 |
ENST00000399262 | JMJD1C | chr10 | 65024410 | - | ENST00000373744 | CTNNA3 | chr10 | 68979628 | - | 3086 | 666 | 183 | 2774 | 863 |
ENST00000399262 | JMJD1C | chr10 | 65024410 | - | ENST00000545309 | CTNNA3 | chr10 | 68979628 | - | 1218 | 666 | 183 | 1217 | 344 |
ENST00000399262 | JMJD1C | chr10 | 65024411 | - | ENST00000433211 | CTNNA3 | chr10 | 68979628 | - | 10587 | 666 | 183 | 2774 | 863 |
ENST00000399262 | JMJD1C | chr10 | 65024411 | - | ENST00000373744 | CTNNA3 | chr10 | 68979628 | - | 3086 | 666 | 183 | 2774 | 863 |
ENST00000399262 | JMJD1C | chr10 | 65024411 | - | ENST00000545309 | CTNNA3 | chr10 | 68979628 | - | 1218 | 666 | 183 | 1217 | 344 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000399262 | ENST00000433211 | JMJD1C | chr10 | 65140078 | - | CTNNA3 | chr10 | 68535282 | - | 0.00017648 | 0.9998235 |
ENST00000399262 | ENST00000373744 | JMJD1C | chr10 | 65140078 | - | CTNNA3 | chr10 | 68535282 | - | 0.000636208 | 0.99936384 |
ENST00000399262 | ENST00000433211 | JMJD1C | chr10 | 65024410 | - | CTNNA3 | chr10 | 68979628 | - | 0.000234016 | 0.99976593 |
ENST00000399262 | ENST00000373744 | JMJD1C | chr10 | 65024410 | - | CTNNA3 | chr10 | 68979628 | - | 0.001092471 | 0.99890757 |
ENST00000399262 | ENST00000545309 | JMJD1C | chr10 | 65024410 | - | CTNNA3 | chr10 | 68979628 | - | 0.005249904 | 0.9947501 |
ENST00000399262 | ENST00000433211 | JMJD1C | chr10 | 65024411 | - | CTNNA3 | chr10 | 68979628 | - | 0.000234016 | 0.99976593 |
ENST00000399262 | ENST00000373744 | JMJD1C | chr10 | 65024411 | - | CTNNA3 | chr10 | 68979628 | - | 0.001092471 | 0.99890757 |
ENST00000399262 | ENST00000545309 | JMJD1C | chr10 | 65024411 | - | CTNNA3 | chr10 | 68979628 | - | 0.005249904 | 0.9947501 |
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Fusion Genomic Features for JMJD1C-CTNNA3 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for JMJD1C-CTNNA3 |
Go to FGviewer for the breakpoints of chr10:65140078-chr10:68535282 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
JMJD1C | CTNNA3 |
FUNCTION: Probable histone demethylase that specifically demethylates 'Lys-9' of histone H3, thereby playing a central role in histone code. Demethylation of Lys residue generates formaldehyde and succinate. May be involved in hormone-dependent transcriptional activation, by participating in recruitment to androgen-receptor target genes (By similarity). {ECO:0000250}. | FUNCTION: May be involved in formation of stretch-resistant cell-cell adhesion complexes. {ECO:0000303|PubMed:11590244}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | CTNNA3 | chr10:65024410 | chr10:68979628 | ENST00000373744 | 3 | 17 | 325_379 | 193.0 | 896.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CTNNA3 | chr10:65024410 | chr10:68979628 | ENST00000433211 | 4 | 18 | 325_379 | 193.0 | 896.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CTNNA3 | chr10:65024411 | chr10:68979628 | ENST00000373744 | 3 | 17 | 325_379 | 193.0 | 896.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CTNNA3 | chr10:65024411 | chr10:68979628 | ENST00000433211 | 4 | 18 | 325_379 | 193.0 | 896.0 | Coiled coil | Ontology_term=ECO:0000255 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | JMJD1C | chr10:65024410 | chr10:68979628 | ENST00000399251 | - | 3 | 25 | 2274_2498 | 0 | 477.0 | Domain | JmjC |
Hgene | JMJD1C | chr10:65024410 | chr10:68979628 | ENST00000399262 | - | 3 | 26 | 2274_2498 | 149.0 | 2541.0 | Domain | JmjC |
Hgene | JMJD1C | chr10:65024410 | chr10:68979628 | ENST00000542921 | - | 2 | 25 | 2274_2498 | 0 | 2359.0 | Domain | JmjC |
Hgene | JMJD1C | chr10:65024411 | chr10:68979628 | ENST00000399251 | - | 3 | 25 | 2274_2498 | 0 | 477.0 | Domain | JmjC |
Hgene | JMJD1C | chr10:65024411 | chr10:68979628 | ENST00000399262 | - | 3 | 26 | 2274_2498 | 149.0 | 2541.0 | Domain | JmjC |
Hgene | JMJD1C | chr10:65024411 | chr10:68979628 | ENST00000542921 | - | 2 | 25 | 2274_2498 | 0 | 2359.0 | Domain | JmjC |
Hgene | JMJD1C | chr10:65140078 | chr10:68535282 | ENST00000399251 | - | 2 | 25 | 2274_2498 | 0 | 477.0 | Domain | JmjC |
Hgene | JMJD1C | chr10:65140078 | chr10:68535282 | ENST00000399262 | - | 2 | 26 | 2274_2498 | 111.0 | 2541.0 | Domain | JmjC |
Hgene | JMJD1C | chr10:65140078 | chr10:68535282 | ENST00000542921 | - | 1 | 25 | 2274_2498 | 0 | 2359.0 | Domain | JmjC |
Hgene | JMJD1C | chr10:65024410 | chr10:68979628 | ENST00000399251 | - | 3 | 25 | 2066_2070 | 0 | 477.0 | Motif | Note=LXXLL motif |
Hgene | JMJD1C | chr10:65024410 | chr10:68979628 | ENST00000399262 | - | 3 | 26 | 2066_2070 | 149.0 | 2541.0 | Motif | Note=LXXLL motif |
Hgene | JMJD1C | chr10:65024410 | chr10:68979628 | ENST00000542921 | - | 2 | 25 | 2066_2070 | 0 | 2359.0 | Motif | Note=LXXLL motif |
Hgene | JMJD1C | chr10:65024411 | chr10:68979628 | ENST00000399251 | - | 3 | 25 | 2066_2070 | 0 | 477.0 | Motif | Note=LXXLL motif |
Hgene | JMJD1C | chr10:65024411 | chr10:68979628 | ENST00000399262 | - | 3 | 26 | 2066_2070 | 149.0 | 2541.0 | Motif | Note=LXXLL motif |
Hgene | JMJD1C | chr10:65024411 | chr10:68979628 | ENST00000542921 | - | 2 | 25 | 2066_2070 | 0 | 2359.0 | Motif | Note=LXXLL motif |
Hgene | JMJD1C | chr10:65140078 | chr10:68535282 | ENST00000399251 | - | 2 | 25 | 2066_2070 | 0 | 477.0 | Motif | Note=LXXLL motif |
Hgene | JMJD1C | chr10:65140078 | chr10:68535282 | ENST00000399262 | - | 2 | 26 | 2066_2070 | 111.0 | 2541.0 | Motif | Note=LXXLL motif |
Hgene | JMJD1C | chr10:65140078 | chr10:68535282 | ENST00000542921 | - | 1 | 25 | 2066_2070 | 0 | 2359.0 | Motif | Note=LXXLL motif |
Hgene | JMJD1C | chr10:65024410 | chr10:68979628 | ENST00000399251 | - | 3 | 25 | 1846_1871 | 0 | 477.0 | Zinc finger | C6-type |
Hgene | JMJD1C | chr10:65024410 | chr10:68979628 | ENST00000399262 | - | 3 | 26 | 1846_1871 | 149.0 | 2541.0 | Zinc finger | C6-type |
Hgene | JMJD1C | chr10:65024410 | chr10:68979628 | ENST00000542921 | - | 2 | 25 | 1846_1871 | 0 | 2359.0 | Zinc finger | C6-type |
Hgene | JMJD1C | chr10:65024411 | chr10:68979628 | ENST00000399251 | - | 3 | 25 | 1846_1871 | 0 | 477.0 | Zinc finger | C6-type |
Hgene | JMJD1C | chr10:65024411 | chr10:68979628 | ENST00000399262 | - | 3 | 26 | 1846_1871 | 149.0 | 2541.0 | Zinc finger | C6-type |
Hgene | JMJD1C | chr10:65024411 | chr10:68979628 | ENST00000542921 | - | 2 | 25 | 1846_1871 | 0 | 2359.0 | Zinc finger | C6-type |
Hgene | JMJD1C | chr10:65140078 | chr10:68535282 | ENST00000399251 | - | 2 | 25 | 1846_1871 | 0 | 477.0 | Zinc finger | C6-type |
Hgene | JMJD1C | chr10:65140078 | chr10:68535282 | ENST00000399262 | - | 2 | 26 | 1846_1871 | 111.0 | 2541.0 | Zinc finger | C6-type |
Hgene | JMJD1C | chr10:65140078 | chr10:68535282 | ENST00000542921 | - | 1 | 25 | 1846_1871 | 0 | 2359.0 | Zinc finger | C6-type |
Tgene | CTNNA3 | chr10:65024410 | chr10:68979628 | ENST00000373744 | 3 | 17 | 74_111 | 193.0 | 896.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CTNNA3 | chr10:65024410 | chr10:68979628 | ENST00000433211 | 4 | 18 | 74_111 | 193.0 | 896.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CTNNA3 | chr10:65024411 | chr10:68979628 | ENST00000373744 | 3 | 17 | 74_111 | 193.0 | 896.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CTNNA3 | chr10:65024411 | chr10:68979628 | ENST00000433211 | 4 | 18 | 74_111 | 193.0 | 896.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CTNNA3 | chr10:65140078 | chr10:68535282 | ENST00000373744 | 5 | 17 | 325_379 | 349.0 | 896.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CTNNA3 | chr10:65140078 | chr10:68535282 | ENST00000373744 | 5 | 17 | 74_111 | 349.0 | 896.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CTNNA3 | chr10:65140078 | chr10:68535282 | ENST00000433211 | 6 | 18 | 325_379 | 349.0 | 896.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | CTNNA3 | chr10:65140078 | chr10:68535282 | ENST00000433211 | 6 | 18 | 74_111 | 349.0 | 896.0 | Coiled coil | Ontology_term=ECO:0000255 |
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Fusion Gene Sequence for JMJD1C-CTNNA3 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000399262_ENST00000433211_TCGA-20-1684-01A_JMJD1C_chr10_65140078_-_CTNNA3_chr10_68535282_length(transcript)=10005nt_BP=552nt CACAAGGCTGCGAATCTGGGAGTCCAAAGGAGTGTTTGCGGGGAGGGCCCGAGGTCGCTGTGTCCGGGGCAGAGCGGCCGGTTCGTCCCG AGTCTGCGCTCTTTCGGGTCCGCTGCTGTGTCCCGGTCCGCTCTCCTCAGCATGAGCGGCCGGTAGGAGTGAGGTTTCATCGGTTCCCTC GCACTGGAGGAGGCAGCGGCCGCTTCGGCAGCGACAGCTATGGCGGTAGAGACGCGGGCAGAGCTGGTGGGTAAGCGGTTCCTGTGTGTG GCGGTCGGCGACGAGGCACGTTCGGAGCGCTGGGAGAGCGGACGCGGCTGGCGAAGCTGGCGAGCGGGGGTCATCCGAGCCGTGTCACAC AGGGACAGCCGCAATCCGGACCTGGCGGTGTATGTGGAATTTGATGATCTTGAATGGGATAAACGAGAGTGGGTTAAAGTTTATGAAGAT TTTTCAACTTTCTTGGTGGAATACCACTTAATCTGGGCCAAAAGGAATGACCCTAGCCAGACTCAGGGATCAAAGAGCAAACAGATTCAG TGGCCTGCATTGGCTGGAAAAAAAGAAAGGAGTAATACCCTGAATATTGCTTTAGACAACATGTGTAAGAAGACAAGAGACCTTCGCAGA CAGCTCCGCAAGGCTATTATAGATCATGTGTCAGACTCTTTCCTGGATACGACAGTCCCTCTTTTGGTTCTCATTGAAGCTGCTAAGAAT GGCCGGGAAAAGGAAATAAAAGAATATGCTGCGATATTTCATGAACACACCAGCAGGCTTGTAGAGGTGGCAAATCTTGCTTGTTCCATG TCAACAAATGAAGATGGAATTAAAATTGTCAAAATTGCAGCCAATCATTTGGAAACCTTGTGTCCACAGATTATTAATGCTGCACTTGCT TTGGCTGCAAGACCCAAAAGTCAAGCGGTCAAAAACACCATGGAAATGTACAAGCGTACATGGGAGAATCATATACATGTCCTCACTGAA GCCGTAGATGACATTACAAGCATTGATGACTTCCTTGCTGTATCTGAAAGCCATATCTTGGAAGATGTCAACAAGTGTATCATAGCCTTA AGAGACCAGGATGCTGATAATTTAGACCGTGCTGCGGGTGCTATCAGAGGCCGGGCAGCAAGAGTTGCTCACATCGTCACGGGTGAAATG GACAGTTACGAGCCAGGGGCTTACACGGAAGGTGTAATGAGAAATGTTAACTTCCTTACAAGTACTGTAATTCCTGAATTTGTAACACAA GTGAATGTTGCCTTGGAAGCCTTAAGCAAAAGCTCATTGAATGTGTTGGATGATAATCAATTTGTGGACATCTCAAAGAAGATCTATGAT ACAATTCATGATATCAGATGTTCAGTCATGATGATTCGGACCCCAGAGGAACTGGAGGATGTTTCTGACCTTGAAGAGGAACACGAGGTC CGCAGTCACACCAGCATTCAGACCGAAGGGAAAACTGATAGGGCTAAGATGACTCAACTGCCTGAGGCAGAAAAAGAAAAGATTGCTGAG CAAGTTGCTGATTTCAAGAAAGTAAAGAGTAAGCTGGATGCTGAGATTGAGATATGGGATGATACAAGCAACGACATCATTGTTCTGGCC AAGAACATGTGTATGATCATGATGGAGATGACAGACTTCACTAGGGGCAAAGGACCACTAAAGCATACAACTGATGTGATCTATGCAGCG AAAATGATATCAGAATCAGGATCAAGGATGGATGTCCTTGCTCGGCAGATTGCTAATCAGTGCCCAGATCCATCTTGTAAACAGGACTTG TTGGCCTACCTGGAACAGATTAAGTTCTACTCCCACCAACTGAAAATCTGCAGTCAAGTTAAAGCTGAGATCCAGAACCTGGGAGGAGAG CTCATCATGTCAGCTTTGGACAGTGTCACATCCCTGATCCAAGCAGCCAAAAATTTAATGAATGCTGTAGTGCAAACAGTGAAAATGTCT TACATTGCCTCAACCAAGATCATCCGAATCCAGAGTCCTGCTGGGCCCCGGCACCCAGTTGTGATGTGGAGAATGAAGGCTCCTGCAAAA AAACCCTTGATTAAAAGAGAGAAGCCAGAGGAAACGTGTGCAGCTGTCAGACGAGGCTCAGCAAAGAAAAAAATCCATCCATTGCAAGTC ATGAGTGAATTTAGAGGAAGACAAATCTACTGAAACCACTATTCTACATATAGTGCCTATATGACAAAATCCTGCCTAACCACACTGCTT TATTTTACACTTAAGAAGTTCTGTAATTTCACTAAGTTTTGGTGTTTAACTCACAAATAACATAAAATATTGGGCGCTAAATCAACAAAA GCAATATATATTTGGGATCATATCACTGTCATTTCTGTATGGTCAGCACCTAATAGTTAAGGAATATTTGCTTGTTGAATGAATGAAATT ATCACGTGTCATTCAGCGTTTCCCATCATAGAGATTATCTACTATTCGTTACCAAATAAACACAGGAGAGGCCAGAGAGTCCTGTTTATC TGTAATACTTCATGTACACTTATCATCCTTATCTTGAATTAAAACACTAACATGAGCTCCTAACTTGGTTTTTTAATAGAAACAAAAGAC TTTTATAAAATATTTTCCCATTTAATCTCCATGCTTTCTTTATCTGATCTAACCTGGCACCTAACCAGGCAGAAATGTATGATTCCTGCC ATAGCAAAAAAACCACCTTTTAATCTCTAGATAGCTGTACTCATTGTCAACTTATTAGGCTAATATCCATTATAAACTAATCAAATTTGA ATAGTTAGGCTACTTGCTGGATTTTGAAGGTCAACCTTGTTTATTAATAAAATGCTTTCTTAACATTATAAAGGTTACAATGAGTTCTGA TGCCACATACTCACCTTTTGGGTTTCCAATGTGTTAGAGAGTTCTGTACTTTTGAGTGTTAGGCCTATCCGAATACATATGTGAAAGAAG AGTTATCACCCATTGGGAAAATGAGACAACAAACTATATCCCAAAGTGAGTTATATTAATAATAACAGAAGTGTAAGTTCTGTATGACCC TATTTTTACAAACATAAAAATACATTTTTATCAGCTTGCAATTGTAATTAAAAGGAAAATGGCAGTTTGAAAAATCTTTTGACGTTGAGT AAAATATAACTGCATGAACTGTACCATTGAACTATGAAGCAGTTAATGGCAATGAAGCTGGAGTGATTTTAATAACGTTCTTTTAAATAA AAGTCACTGGGGTCATTTTACAACTCCAGTCACTGTGTTCATTCCTAGTTGAGTTCATAATGGACTTCATAATAGTCTTAGAGTCTAGTG TACCTCTCTCTGTCATTCTCTCTCTCTTTTTCTCTCCCCTGATGACCTGCCTCTCTCTGTCTTTCAAAAATGTCCTTAACAGAAACTCTT TGGAGGCCATAAGTTTTGTTTTCATTTTTTCTCATTCATAGAGTTCTGATTCACAGACTTTAAAAAACATTTTCTATTCTACATTATCAT AATAGTATTATATTGTACCTTTTTACTTCTAAAACATTGCCATTGATGAGAGGCGTCTCAGCAACGATGTAACCTTAGATTGATGAGAAA AAAATTTACACATACAATACCAGTTGATATTAGGAGAACCAGTTTGGGTAAAAGGATGCATGAAACATAGAAAAGCATAAAGATTGACAG TACGATATGTGTGGAATCTTAAGCATAATGGTATGGGAAAAGAAGGATCTATTTAATAGGTCATTATTAATTATGCAGGAAATGTTAAAT TTCTTGTAATGAATTATTTCAATCTTCCAAGTAGCTGGATTGCCTGAGCTCAGTGTAAAACTTCCTAGGAGGTGAAGGCAATAAACTCCT CCCTGTTTTGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAGAAGAAAAGGCAGTGAAGAAGGGAATTAGGG AATTCAGATGACTCTGTTTTTCAGAATTATCTAGATGATTGAGGCAAATAGAGATTTTCTTTTATTGAAATGCTGCCATCATTTTCTGCT CTAAGTGTAGATGTTGCACGAGTGACATCTGTGGTATATCCTTCTTCCAGATAGAAGTATAAATTTATAATTTAGTGGGGAGAGGAATTT TCTTTTAATCACCAAACTACCAGCTGTATAGAAAATTTTTTTGAAATCACCAAACTAGCAGTTGTGTATCTTAGCTCCTAAAGCCACATT CACAAGAATCATAAGCATCTCATTTAGAAAATCTAATGTCCACCGGACCCAACATCATCTTTCCACATGTTGGAGTTTAGAACATGCAGT ATTGGACACCAAAAGAACAGAAATAACTTGAAATTATACAATTACCAAATAACCTCCATCTCTTTGATAAAAATGACTTTTTACCCAAAG TGAGATGTGAACAAGTTCTCCTCTTTAACCCAGGCAGATTTTCAGCTTAGCTCAAAGCAAACTATAATTAAATAAAACAATAAAAATTTT AACTCAATGAATATCCTAGGAGTTAATCTGCTGTGGTAATCGATAGTGACATAAAAACAAGATGCATAGAGCTGAAAAAGGCATCTGTCC ACCTGAGTGAATTCCTGTAGTAGGCAGCATTTCAAGATTTAGTTTGATTCAAACCTGCTGATAAAACAAATGCTTATATGCAAGAAAAAC TAGCAGCAAGATATGAATAAATCTCCCCATTATGTTAAAAACTAATCAGCATGACACATTTATATTTAGGTATTTCTTCTGCAGAGGATT GCCAGAAATTTCTTAATGAGAGTGATAATTTGGTGATCCACCTATGTACCTTTTGATGTCTCATCACAGAGATTAGTGCTTCCTCTGATA ATACATTTGCTTGATCCTGCTAATAAGAACTCACCTTTCTTTTTAACGAAATCAATTTGTGTTAATTTACATAGGGAAAAACGTTCCTTG AGAGGGAGGAGAGGGGTGTTTACCACCCACAGGAGCAGTTCCATCCCTGGTTACCCACCAGTATCCCTGCCAGATGTTAGACTGGAATTA GAATGAAAATTTAAAAAAAAACGAAATAATAATCCACTAAATGGCCTTCTAATTAGAGAAATTTGAAGATTTCTATCAAATATAAAAAGT GAGAAATAGAAATCATTCCCTTTAATTTATGACAAATTAAAATTATTGAAGTAAAATGTTTCTAAGTCAGTTTCTGGATAGTTCTTGAAT GAGTCAAGAAAAAACTCAAACACTAAATTTCTAAGCTAATTTGTTCATTATTCCTTTCTGTTTATTATTTATTATATGAGTGCAAATTGC AAATGTATTAGAAAAGACAATATAGCCTTCACATTCACAAGTGTGCCTTCTGGCCTTTGAAATCTTTTAACATAAGATCAATATAACATA TTTGTTCCCCATAAAAATCTCTTATGTACAGGGAATAAGGTCCTCCATAGCTACACAGAGACACCCATTCTTGCAGTCTGGCATTCTTAA CACCTTTAGCTTCAAAGGCAGTCGGTTTCAATTTCAAGCTAAAATTGTGAATATACAATTAAGTGCGCAACTTGGGCCTTCAGACCAAAT AATTAATGCTCCTCAAATTAAATAATGAGTGGCTGAAAAGCCTAATGTGTAACAACAGAGTAAGTGACTTCAACGGCTTCCTGAACCTTC ATTTTGAGGGTGTTCTCATCTCACCCACCTCTGGGCTAGGTATCCTCTGTTAATTGCTAACAATTTCCTACCAAAATAGTGCAATCAGGA CTGCCCATCACAGCAAATTACTCCAATTAATGCCCTTTCCTCTTCTGTGAACCAAAAATATCTCTCTCCTGTCTCTCATCTCTATCCCAG GTATAAATTGACTAATAAATTTTACAGAGTTTTAGTCAAAATTATGAATTTTAATTTCCAGCAACATTATTCCTTTAGTCTTTCTATTCC CCAAAACATTCTTAAATTTTGGTATCAAATGTTCATTTCTGTCCTAGAGATTGTGGTTCCCATGGCTACAGATTTTTGTATAGTGGTAGT ATGAGTGGAATAAGATCTGAGACTTTTCCTGGTGATATCCACCATTCTCTTGTGAACTCATTGCAGAATAAACAGCCTCTTTCACTTTCA TTGTAAGTAGTTCTTTAGGTTGGCAAAGCAGGCACCAGAATCTGAATTTGAATGAAATCTGTACTTTCTTTTGTTGGCCTATTTTTTGCC AAGACAGCCTGCCTATTGTATATTTAGGAATCAAATATTCATTTTTTCTGTTTGTAAAGCCAGAAATATTTCAGTTAAAAAGAATATAAT TTTATATTATTTTAATAATTCTTTTTAAGTAAAGTAGGAAAATTTCTGCCACCTGAGATGTTACTGTTTTTATTTATATGAAAATTCCAT TTTTTTCTTTATGACTCTTTTCCCATACCATTATGATATGTTCAGCATTAGTATTTTCCATTTTACCACTAAACAAATAAGCCAGGACTA ATAACAATAGCAGTTTGAGAGTTTTTATTTTGGCATTTTGGTTTTAATTAGGAAAGAAAACATGGATGCTATTAAAACTAGTTGTAGTTA AAAATGTTTTGAATGAGGCTACTAACGCTATCTTAGTCATCTCAAAGAGAAAGAGAAGAAGTAAAATTTTAAATACCTTTTTGGCATTTT TAACCAATTCATATGAACAAAAACATATATTCTATTAAAGCAAAATAAAGAATAGTTTAAAACACTAGTCTTCTTGCATGTGAATATTTT CCCCCTAACAGACAAGATAGAATCCATTTCTGGACACTCTAAAAGAAAGTAATGTTAATTGAGAGAGCTGTCTCCAAATGGAACTCAACC TGACCAGAATCCCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGACGAGATGCTTTATGGCTGCTGGCTG CATTATGGCATCTAGCAGTCCCCACTGGTTTGTGGGAACAAAACACATGGATTGATATTCAATATGAGTTTGGTAAGTTGGAGAAAAATG GAGACGATACGGAGTAGTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGGGGTAGTTGCAGAAGCATTTA GCTTTCATAGATGAGGGGAGAGTTTTTTGGTTTTATGAAGATTAGGCAGCCCTCCTGAGGAAAGTATTAAGGATAGAATGAGACACTTGT CTTGGTGGTTTGGTGAAGTCGTGTCGAAGGCAAAAGGATGAACTACACATATTTTGAGCATGATTTAGTAATATTGTTTGCAAGTTGAGA AACAGAAATTCAGCCATTCTCCTGACTGATGGTAGGTGAAATTCTTCCCAATATTAGAGCCAATCTGGGTTACCATACGTTCATATATTT AACAGCTATTTGTTAAACAACTGTGATGTTCCAGGCACTGTTCTAGGTTCTTAGGATACACCATATAACAAAACAAATAGTGATCCTTGC CCTCATGTGCCAGCTCTGTGTTAAATGCTAACTATTATCTTATTCAATCCTCCAAATAACCCTATAGGATATATATCATTCCACAGACAA GGAAGCTGAGGGTTAAATGGGATAAGAATCTTGCTCAAAGTCTCACTGGCTTTAAAATATTAATATATATTTTACATCATTCAAGACAGA TATATAATTAGCTGAATATTCTCACCTCTATTAACTGAATGTAGAGTGTCAGGTACATGGGAAGTAAGTTATTTACGTGATCTGAAATAA GAGGACAACCTTTGCCAAATTACTTTTATTACCATGGAGAAGAAAGCTTCAATGAAATGCCTGTTTCAGCCCATCTTCAGTATTGGTTGG TTAATACCATTTGTTAACACCAATCCTTTCCTCTTTTACTGCTAACATGTGACTGTGTTTAAAATTATAGATTGCAGCAGAGTGTTGGCC AAGGATTATTGTAGTAGGATAAAGTTTCCCTGTATTTGAAATTTACCCAAACTGTAGCAAATACATCTTTCCTTCTTTATGGAGGTCACA CGTGTGCATAGTATGTGCCTGAATACAGGTAAACTTTGTGTTTTAAAATTACATGGCCTTTTTTAGAGTCGACTGAAGGCTAGACTCTTC TTGCCCATGTTGCTGGATAGGCTTTCAAATCTCAGGCCTTGGAGAGTTAAATGACTTTCTGATATTTCTTACGGTGGAGCCACATAAGAA ATACACACATTCCTAGTTTGAGCAATGGATGTGTATATTGGGGATCTTCACTTTTATGTATCTGGTAGTCATGATGGTGCCTATTCCCAA CTGTAGGAAAGGAAAGCCCTCAAGGAGAAAATTCTCTTTCAAAAAGGCTCAGATTTCTAACAATTATGTCTAAATGTTTCTTCAATTTAG AACATGTACAAAAGCTACTTAATATTAGCAGAGTAGTTCTTGTGTTTTCATTTCAAATGAAATATTCCCAGTTCCAAAGTTTATTTCCTT GGCATTTTCAAGAAGGATGGTTATTTTTAGTTCTGGTTATTTGGTGTTGGAGGTCTGTGACACTTCCTTATACATTTAAAGCCCCCTTTG AATAGTTGTATCAATAGTTCAAAAGCCTGTAGATATCTTGCTTTTCTATTCTGACAGCCCAGCTTCTGCAGACTCAGGCCAACCTTAGGT ATGTCACATCAGTTCCCCATCTGTGTAAATTACCTGAACCTCTCTGTGGTATTCACTGAGAGTTGAGCTTCTACTAAGGGATTTCCTTGA CCTGGGCTTTTAACACCAGATTTGTAGTGGAGTGTTTATTAGTAAAGCAAAGGAGTAAGTCAGAGATGCTAGCCCCTGCTCTCAGTTAAA CAGAACTATCCTCCTTCCTGAATATTTAAACATAAAATTAATTTTAAACTACTATAAAAATCATGTTCCATTGCTTGCCAAATCTTATAC CATTATAATGCTGTATTTTTACATGTTAGTATACATTGTGTCCATAGGGATATAAATATGAGAATTTCAGCAACTGTCTTGCAGGGTTAA GATGTGCTATTTGTTGATTTTGCAAATTTTTCTCATGTGGTACAGTCCCTCCAAAGAAAATTTCCTTAGACCTAAATGGTAGCATAATAA TTTCTCCTCCATATCCGTGACTAACAAGTTCCTGAAAACAGAAGTAGACATATTTTATGCCCAATTTAGTACCTAATAATTGAGGCTTAA AACAAAATTTTCTTGGGCAAGTTGGGTGATTAAATATGAATTAAAACTTCTAGAGAAAGATTTCCAGATGCCCCTGTTTTCCATTTTGAT TATGGTTTTAGTTTCATAGCAACTTGGGGGAAAAAAATCATTTACTTTATGTCGTATTACAACAACAACTTTGACAGCTTAAATGTAGTG ACCTCTCTGAAGGTAATATGCACATTATAATTTAGGATGAAAGCAGATTTAAACTAAGACTTTCTGAGATGAAATAAAAGTAACCAATTC ATAATAGTCATGTTTATTGCAGCAATATCTTGGGAACTTAAGTTTAGTGGCGTTTGAGGTGTTTCTGACTATCTTGCTTGTTCATTTCAC CCTGCTCTGCAGAGACAGAATATGATTGAATGAACTGCCCATTATATTAATGACCAGTTCAAAGCAGTTTTGTGCTTTGGCTATAGATAA AATTTGGCAAAAATACTGTAGGCCTTTCTGGTCCATATTTATCCTTAAAGTATTTTTGCCAATCAATAAAAATGAAATATTTATCCAGAA ATAGAAAAAGCTCTTTCCTATGACATTGACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAACTGAATCA ATGATTTTTTTTAGTTGTGCTCTTAATTGCATTATTTCACATATGTAACACTGGGTTTGTTTTGGTTATATAGTATTATTTTACTTTATT CTAATTTCAACTCATGTCACTCTGTAGCTCATTAAGAATTTGTTCAACTGAAAATTAAAATGTGTGTTAAAGCAATAAAAATGAAAAGAT >In-frame_ENST00000399262_ENST00000433211_TCGA-20-1684-01A_JMJD1C_chr10_65140078_-_CTNNA3_chr10_68535282_length(amino acids)=669AA_start in transcript=183_stop in transcript=2192 MEEAAAASAATAMAVETRAELVGKRFLCVAVGDEARSERWESGRGWRSWRAGVIRAVSHRDSRNPDLAVYVEFDDLEWDKREWVKVYEDF STFLVEYHLIWAKRNDPSQTQGSKSKQIQWPALAGKKERSNTLNIALDNMCKKTRDLRRQLRKAIIDHVSDSFLDTTVPLLVLIEAAKNG REKEIKEYAAIFHEHTSRLVEVANLACSMSTNEDGIKIVKIAANHLETLCPQIINAALALAARPKSQAVKNTMEMYKRTWENHIHVLTEA VDDITSIDDFLAVSESHILEDVNKCIIALRDQDADNLDRAAGAIRGRAARVAHIVTGEMDSYEPGAYTEGVMRNVNFLTSTVIPEFVTQV NVALEALSKSSLNVLDDNQFVDISKKIYDTIHDIRCSVMMIRTPEELEDVSDLEEEHEVRSHTSIQTEGKTDRAKMTQLPEAEKEKIAEQ VADFKKVKSKLDAEIEIWDDTSNDIIVLAKNMCMIMMEMTDFTRGKGPLKHTTDVIYAAKMISESGSRMDVLARQIANQCPDPSCKQDLL AYLEQIKFYSHQLKICSQVKAEIQNLGGELIMSALDSVTSLIQAAKNLMNAVVQTVKMSYIASTKIIRIQSPAGPRHPVVMWRMKAPAKK -------------------------------------------------------------- >In-frame_ENST00000399262_ENST00000373744_TCGA-20-1684-01A_JMJD1C_chr10_65140078_-_CTNNA3_chr10_68535282_length(transcript)=2504nt_BP=552nt CACAAGGCTGCGAATCTGGGAGTCCAAAGGAGTGTTTGCGGGGAGGGCCCGAGGTCGCTGTGTCCGGGGCAGAGCGGCCGGTTCGTCCCG AGTCTGCGCTCTTTCGGGTCCGCTGCTGTGTCCCGGTCCGCTCTCCTCAGCATGAGCGGCCGGTAGGAGTGAGGTTTCATCGGTTCCCTC GCACTGGAGGAGGCAGCGGCCGCTTCGGCAGCGACAGCTATGGCGGTAGAGACGCGGGCAGAGCTGGTGGGTAAGCGGTTCCTGTGTGTG GCGGTCGGCGACGAGGCACGTTCGGAGCGCTGGGAGAGCGGACGCGGCTGGCGAAGCTGGCGAGCGGGGGTCATCCGAGCCGTGTCACAC AGGGACAGCCGCAATCCGGACCTGGCGGTGTATGTGGAATTTGATGATCTTGAATGGGATAAACGAGAGTGGGTTAAAGTTTATGAAGAT TTTTCAACTTTCTTGGTGGAATACCACTTAATCTGGGCCAAAAGGAATGACCCTAGCCAGACTCAGGGATCAAAGAGCAAACAGATTCAG TGGCCTGCATTGGCTGGAAAAAAAGAAAGGAGTAATACCCTGAATATTGCTTTAGACAACATGTGTAAGAAGACAAGAGACCTTCGCAGA CAGCTCCGCAAGGCTATTATAGATCATGTGTCAGACTCTTTCCTGGATACGACAGTCCCTCTTTTGGTTCTCATTGAAGCTGCTAAGAAT GGCCGGGAAAAGGAAATAAAAGAATATGCTGCGATATTTCATGAACACACCAGCAGGCTTGTAGAGGTGGCAAATCTTGCTTGTTCCATG TCAACAAATGAAGATGGAATTAAAATTGTCAAAATTGCAGCCAATCATTTGGAAACCTTGTGTCCACAGATTATTAATGCTGCACTTGCT TTGGCTGCAAGACCCAAAAGTCAAGCGGTCAAAAACACCATGGAAATGTACAAGCGTACATGGGAGAATCATATACATGTCCTCACTGAA GCCGTAGATGACATTACAAGCATTGATGACTTCCTTGCTGTATCTGAAAGCCATATCTTGGAAGATGTCAACAAGTGTATCATAGCCTTA AGAGACCAGGATGCTGATAATTTAGACCGTGCTGCGGGTGCTATCAGAGGCCGGGCAGCAAGAGTTGCTCACATCGTCACGGGTGAAATG GACAGTTACGAGCCAGGGGCTTACACGGAAGGTGTAATGAGAAATGTTAACTTCCTTACAAGTACTGTAATTCCTGAATTTGTAACACAA GTGAATGTTGCCTTGGAAGCCTTAAGCAAAAGCTCATTGAATGTGTTGGATGATAATCAATTTGTGGACATCTCAAAGAAGATCTATGAT ACAATTCATGATATCAGATGTTCAGTCATGATGATTCGGACCCCAGAGGAACTGGAGGATGTTTCTGACCTTGAAGAGGAACACGAGGTC CGCAGTCACACCAGCATTCAGACCGAAGGGAAAACTGATAGGGCTAAGATGACTCAACTGCCTGAGGCAGAAAAAGAAAAGATTGCTGAG CAAGTTGCTGATTTCAAGAAAGTAAAGAGTAAGCTGGATGCTGAGATTGAGATATGGGATGATACAAGCAACGACATCATTGTTCTGGCC AAGAACATGTGTATGATCATGATGGAGATGACAGACTTCACTAGGGGCAAAGGACCACTAAAGCATACAACTGATGTGATCTATGCAGCG AAAATGATATCAGAATCAGGATCAAGGATGGATGTCCTTGCTCGGCAGATTGCTAATCAGTGCCCAGATCCATCTTGTAAACAGGACTTG TTGGCCTACCTGGAACAGATTAAGTTCTACTCCCACCAACTGAAAATCTGCAGTCAAGTTAAAGCTGAGATCCAGAACCTGGGAGGAGAG CTCATCATGTCAGCTTTGGACAGTGTCACATCCCTGATCCAAGCAGCCAAAAATTTAATGAATGCTGTAGTGCAAACAGTGAAAATGTCT TACATTGCCTCAACCAAGATCATCCGAATCCAGAGTCCTGCTGGGCCCCGGCACCCAGTTGTGATGTGGAGAATGAAGGCTCCTGCAAAA AAACCCTTGATTAAAAGAGAGAAGCCAGAGGAAACGTGTGCAGCTGTCAGACGAGGCTCAGCAAAGAAAAAAATCCATCCATTGCAAGTC ATGAGTGAATTTAGAGGAAGACAAATCTACTGAAACCACTATTCTACATATAGTGCCTATATGACAAAATCCTGCCTAACCACACTGCTT TATTTTACACTTAAGAAGTTCTGTAATTTCACTAAGTTTTGGTGTTTAACTCACAAATAACATAAAATATTGGGCGCTAAATCAACAAAA GCAATATATATTTGGGATCATATCACTGTCATTTCTGTATGGTCAGCACCTAATAGTTAAGGAATATTTGCTTGTTGAATGAATGAAATT >In-frame_ENST00000399262_ENST00000373744_TCGA-20-1684-01A_JMJD1C_chr10_65140078_-_CTNNA3_chr10_68535282_length(amino acids)=669AA_start in transcript=183_stop in transcript=2192 MEEAAAASAATAMAVETRAELVGKRFLCVAVGDEARSERWESGRGWRSWRAGVIRAVSHRDSRNPDLAVYVEFDDLEWDKREWVKVYEDF STFLVEYHLIWAKRNDPSQTQGSKSKQIQWPALAGKKERSNTLNIALDNMCKKTRDLRRQLRKAIIDHVSDSFLDTTVPLLVLIEAAKNG REKEIKEYAAIFHEHTSRLVEVANLACSMSTNEDGIKIVKIAANHLETLCPQIINAALALAARPKSQAVKNTMEMYKRTWENHIHVLTEA VDDITSIDDFLAVSESHILEDVNKCIIALRDQDADNLDRAAGAIRGRAARVAHIVTGEMDSYEPGAYTEGVMRNVNFLTSTVIPEFVTQV NVALEALSKSSLNVLDDNQFVDISKKIYDTIHDIRCSVMMIRTPEELEDVSDLEEEHEVRSHTSIQTEGKTDRAKMTQLPEAEKEKIAEQ VADFKKVKSKLDAEIEIWDDTSNDIIVLAKNMCMIMMEMTDFTRGKGPLKHTTDVIYAAKMISESGSRMDVLARQIANQCPDPSCKQDLL AYLEQIKFYSHQLKICSQVKAEIQNLGGELIMSALDSVTSLIQAAKNLMNAVVQTVKMSYIASTKIIRIQSPAGPRHPVVMWRMKAPAKK -------------------------------------------------------------- >In-frame_ENST00000399262_ENST00000433211_TCGA-13-0891_JMJD1C_chr10_65024410_-_CTNNA3_chr10_68979628_length(transcript)=10587nt_BP=666nt CACAAGGCTGCGAATCTGGGAGTCCAAAGGAGTGTTTGCGGGGAGGGCCCGAGGTCGCTGTGTCCGGGGCAGAGCGGCCGGTTCGTCCCG AGTCTGCGCTCTTTCGGGTCCGCTGCTGTGTCCCGGTCCGCTCTCCTCAGCATGAGCGGCCGGTAGGAGTGAGGTTTCATCGGTTCCCTC GCACTGGAGGAGGCAGCGGCCGCTTCGGCAGCGACAGCTATGGCGGTAGAGACGCGGGCAGAGCTGGTGGGTAAGCGGTTCCTGTGTGTG GCGGTCGGCGACGAGGCACGTTCGGAGCGCTGGGAGAGCGGACGCGGCTGGCGAAGCTGGCGAGCGGGGGTCATCCGAGCCGTGTCACAC AGGGACAGCCGCAATCCGGACCTGGCGGTGTATGTGGAATTTGATGATCTTGAATGGGATAAACGAGAGTGGGTTAAAGTTTATGAAGAT TTTTCAACTTTCTTGGTGGAATACCACTTAATCTGGGCCAAAAGGAATGACCCTAGCCAGACTCAGGGATCAAAGAGCAAACAGATTCAG TGGCCTGCATTGACTTTCAAACCTCTGGTTGAAAGAAATATACCCAGTTCAGTCACTGCAGTAGAATTCCTTGTAGATAAGCAACTGGAT TTTTTAACTGAAGATAGTGCCTTTCAGCCCTACCAGGACTTAAAATCTCCAAATCAGAGAGATGAAATTGCAGGAGCCCGAGCTTCACTG AAGGAGAACTCTCCCCTCTTGCATTCAATTTGTTCAGCTTGTTTGGAGCATTCTGATGTTGCTTCCCTCAAAGCAAGCAAGGACACAGTT TGTGAAGAAATTCAGAATGCTCTCAATGTAATTTCAAATGCTTCACAAGGGATCCAGAATATGACAACCCCACCAGAACCTCAGGCAGCA ACCCTGGGAAGTGCCCTTGATGAGCTGGAGAATTTAATTGTCCTGAATCCACTCACAGTAACTGAGGAGGAAATACGACCATCACTAGAG AAACGCCTTGAAGCCATTATCAGTGGGGCTGCTCTGCTGGCGGATTCTTCATGTACGAGGGACTTACACCGAGAGCGGATTATCGCAGAA TGCAACGCCATTCGCCAGGCTCTTCAGGATCTGCTTTCAGAGTACATGAACAACGCTGGAAAAAAAGAAAGGAGTAATACCCTGAATATT GCTTTAGACAACATGTGTAAGAAGACAAGAGACCTTCGCAGACAGCTCCGCAAGGCTATTATAGATCATGTGTCAGACTCTTTCCTGGAT ACGACAGTCCCTCTTTTGGTTCTCATTGAAGCTGCTAAGAATGGCCGGGAAAAGGAAATAAAAGAATATGCTGCGATATTTCATGAACAC ACCAGCAGGCTTGTAGAGGTGGCAAATCTTGCTTGTTCCATGTCAACAAATGAAGATGGAATTAAAATTGTCAAAATTGCAGCCAATCAT TTGGAAACCTTGTGTCCACAGATTATTAATGCTGCACTTGCTTTGGCTGCAAGACCCAAAAGTCAAGCGGTCAAAAACACCATGGAAATG TACAAGCGTACATGGGAGAATCATATACATGTCCTCACTGAAGCCGTAGATGACATTACAAGCATTGATGACTTCCTTGCTGTATCTGAA AGCCATATCTTGGAAGATGTCAACAAGTGTATCATAGCCTTAAGAGACCAGGATGCTGATAATTTAGACCGTGCTGCGGGTGCTATCAGA GGCCGGGCAGCAAGAGTTGCTCACATCGTCACGGGTGAAATGGACAGTTACGAGCCAGGGGCTTACACGGAAGGTGTAATGAGAAATGTT AACTTCCTTACAAGTACTGTAATTCCTGAATTTGTAACACAAGTGAATGTTGCCTTGGAAGCCTTAAGCAAAAGCTCATTGAATGTGTTG GATGATAATCAATTTGTGGACATCTCAAAGAAGATCTATGATACAATTCATGATATCAGATGTTCAGTCATGATGATTCGGACCCCAGAG GAACTGGAGGATGTTTCTGACCTTGAAGAGGAACACGAGGTCCGCAGTCACACCAGCATTCAGACCGAAGGGAAAACTGATAGGGCTAAG ATGACTCAACTGCCTGAGGCAGAAAAAGAAAAGATTGCTGAGCAAGTTGCTGATTTCAAGAAAGTAAAGAGTAAGCTGGATGCTGAGATT GAGATATGGGATGATACAAGCAACGACATCATTGTTCTGGCCAAGAACATGTGTATGATCATGATGGAGATGACAGACTTCACTAGGGGC AAAGGACCACTAAAGCATACAACTGATGTGATCTATGCAGCGAAAATGATATCAGAATCAGGATCAAGGATGGATGTCCTTGCTCGGCAG ATTGCTAATCAGTGCCCAGATCCATCTTGTAAACAGGACTTGTTGGCCTACCTGGAACAGATTAAGTTCTACTCCCACCAACTGAAAATC TGCAGTCAAGTTAAAGCTGAGATCCAGAACCTGGGAGGAGAGCTCATCATGTCAGCTTTGGACAGTGTCACATCCCTGATCCAAGCAGCC AAAAATTTAATGAATGCTGTAGTGCAAACAGTGAAAATGTCTTACATTGCCTCAACCAAGATCATCCGAATCCAGAGTCCTGCTGGGCCC CGGCACCCAGTTGTGATGTGGAGAATGAAGGCTCCTGCAAAAAAACCCTTGATTAAAAGAGAGAAGCCAGAGGAAACGTGTGCAGCTGTC AGACGAGGCTCAGCAAAGAAAAAAATCCATCCATTGCAAGTCATGAGTGAATTTAGAGGAAGACAAATCTACTGAAACCACTATTCTACA TATAGTGCCTATATGACAAAATCCTGCCTAACCACACTGCTTTATTTTACACTTAAGAAGTTCTGTAATTTCACTAAGTTTTGGTGTTTA ACTCACAAATAACATAAAATATTGGGCGCTAAATCAACAAAAGCAATATATATTTGGGATCATATCACTGTCATTTCTGTATGGTCAGCA CCTAATAGTTAAGGAATATTTGCTTGTTGAATGAATGAAATTATCACGTGTCATTCAGCGTTTCCCATCATAGAGATTATCTACTATTCG TTACCAAATAAACACAGGAGAGGCCAGAGAGTCCTGTTTATCTGTAATACTTCATGTACACTTATCATCCTTATCTTGAATTAAAACACT AACATGAGCTCCTAACTTGGTTTTTTAATAGAAACAAAAGACTTTTATAAAATATTTTCCCATTTAATCTCCATGCTTTCTTTATCTGAT CTAACCTGGCACCTAACCAGGCAGAAATGTATGATTCCTGCCATAGCAAAAAAACCACCTTTTAATCTCTAGATAGCTGTACTCATTGTC AACTTATTAGGCTAATATCCATTATAAACTAATCAAATTTGAATAGTTAGGCTACTTGCTGGATTTTGAAGGTCAACCTTGTTTATTAAT AAAATGCTTTCTTAACATTATAAAGGTTACAATGAGTTCTGATGCCACATACTCACCTTTTGGGTTTCCAATGTGTTAGAGAGTTCTGTA CTTTTGAGTGTTAGGCCTATCCGAATACATATGTGAAAGAAGAGTTATCACCCATTGGGAAAATGAGACAACAAACTATATCCCAAAGTG AGTTATATTAATAATAACAGAAGTGTAAGTTCTGTATGACCCTATTTTTACAAACATAAAAATACATTTTTATCAGCTTGCAATTGTAAT TAAAAGGAAAATGGCAGTTTGAAAAATCTTTTGACGTTGAGTAAAATATAACTGCATGAACTGTACCATTGAACTATGAAGCAGTTAATG GCAATGAAGCTGGAGTGATTTTAATAACGTTCTTTTAAATAAAAGTCACTGGGGTCATTTTACAACTCCAGTCACTGTGTTCATTCCTAG TTGAGTTCATAATGGACTTCATAATAGTCTTAGAGTCTAGTGTACCTCTCTCTGTCATTCTCTCTCTCTTTTTCTCTCCCCTGATGACCT GCCTCTCTCTGTCTTTCAAAAATGTCCTTAACAGAAACTCTTTGGAGGCCATAAGTTTTGTTTTCATTTTTTCTCATTCATAGAGTTCTG ATTCACAGACTTTAAAAAACATTTTCTATTCTACATTATCATAATAGTATTATATTGTACCTTTTTACTTCTAAAACATTGCCATTGATG AGAGGCGTCTCAGCAACGATGTAACCTTAGATTGATGAGAAAAAAATTTACACATACAATACCAGTTGATATTAGGAGAACCAGTTTGGG TAAAAGGATGCATGAAACATAGAAAAGCATAAAGATTGACAGTACGATATGTGTGGAATCTTAAGCATAATGGTATGGGAAAAGAAGGAT CTATTTAATAGGTCATTATTAATTATGCAGGAAATGTTAAATTTCTTGTAATGAATTATTTCAATCTTCCAAGTAGCTGGATTGCCTGAG CTCAGTGTAAAACTTCCTAGGAGGTGAAGGCAATAAACTCCTCCCTGTTTTGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAA TGCACTGCCCAGAAGAAAAGGCAGTGAAGAAGGGAATTAGGGAATTCAGATGACTCTGTTTTTCAGAATTATCTAGATGATTGAGGCAAA TAGAGATTTTCTTTTATTGAAATGCTGCCATCATTTTCTGCTCTAAGTGTAGATGTTGCACGAGTGACATCTGTGGTATATCCTTCTTCC AGATAGAAGTATAAATTTATAATTTAGTGGGGAGAGGAATTTTCTTTTAATCACCAAACTACCAGCTGTATAGAAAATTTTTTTGAAATC ACCAAACTAGCAGTTGTGTATCTTAGCTCCTAAAGCCACATTCACAAGAATCATAAGCATCTCATTTAGAAAATCTAATGTCCACCGGAC CCAACATCATCTTTCCACATGTTGGAGTTTAGAACATGCAGTATTGGACACCAAAAGAACAGAAATAACTTGAAATTATACAATTACCAA ATAACCTCCATCTCTTTGATAAAAATGACTTTTTACCCAAAGTGAGATGTGAACAAGTTCTCCTCTTTAACCCAGGCAGATTTTCAGCTT AGCTCAAAGCAAACTATAATTAAATAAAACAATAAAAATTTTAACTCAATGAATATCCTAGGAGTTAATCTGCTGTGGTAATCGATAGTG ACATAAAAACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAGTAGGCAGCATTTCAAGATTTAGTTTGAT TCAAACCTGCTGATAAAACAAATGCTTATATGCAAGAAAAACTAGCAGCAAGATATGAATAAATCTCCCCATTATGTTAAAAACTAATCA GCATGACACATTTATATTTAGGTATTTCTTCTGCAGAGGATTGCCAGAAATTTCTTAATGAGAGTGATAATTTGGTGATCCACCTATGTA CCTTTTGATGTCTCATCACAGAGATTAGTGCTTCCTCTGATAATACATTTGCTTGATCCTGCTAATAAGAACTCACCTTTCTTTTTAACG AAATCAATTTGTGTTAATTTACATAGGGAAAAACGTTCCTTGAGAGGGAGGAGAGGGGTGTTTACCACCCACAGGAGCAGTTCCATCCCT GGTTACCCACCAGTATCCCTGCCAGATGTTAGACTGGAATTAGAATGAAAATTTAAAAAAAAACGAAATAATAATCCACTAAATGGCCTT CTAATTAGAGAAATTTGAAGATTTCTATCAAATATAAAAAGTGAGAAATAGAAATCATTCCCTTTAATTTATGACAAATTAAAATTATTG AAGTAAAATGTTTCTAAGTCAGTTTCTGGATAGTTCTTGAATGAGTCAAGAAAAAACTCAAACACTAAATTTCTAAGCTAATTTGTTCAT TATTCCTTTCTGTTTATTATTTATTATATGAGTGCAAATTGCAAATGTATTAGAAAAGACAATATAGCCTTCACATTCACAAGTGTGCCT TCTGGCCTTTGAAATCTTTTAACATAAGATCAATATAACATATTTGTTCCCCATAAAAATCTCTTATGTACAGGGAATAAGGTCCTCCAT AGCTACACAGAGACACCCATTCTTGCAGTCTGGCATTCTTAACACCTTTAGCTTCAAAGGCAGTCGGTTTCAATTTCAAGCTAAAATTGT GAATATACAATTAAGTGCGCAACTTGGGCCTTCAGACCAAATAATTAATGCTCCTCAAATTAAATAATGAGTGGCTGAAAAGCCTAATGT GTAACAACAGAGTAAGTGACTTCAACGGCTTCCTGAACCTTCATTTTGAGGGTGTTCTCATCTCACCCACCTCTGGGCTAGGTATCCTCT GTTAATTGCTAACAATTTCCTACCAAAATAGTGCAATCAGGACTGCCCATCACAGCAAATTACTCCAATTAATGCCCTTTCCTCTTCTGT GAACCAAAAATATCTCTCTCCTGTCTCTCATCTCTATCCCAGGTATAAATTGACTAATAAATTTTACAGAGTTTTAGTCAAAATTATGAA TTTTAATTTCCAGCAACATTATTCCTTTAGTCTTTCTATTCCCCAAAACATTCTTAAATTTTGGTATCAAATGTTCATTTCTGTCCTAGA GATTGTGGTTCCCATGGCTACAGATTTTTGTATAGTGGTAGTATGAGTGGAATAAGATCTGAGACTTTTCCTGGTGATATCCACCATTCT CTTGTGAACTCATTGCAGAATAAACAGCCTCTTTCACTTTCATTGTAAGTAGTTCTTTAGGTTGGCAAAGCAGGCACCAGAATCTGAATT TGAATGAAATCTGTACTTTCTTTTGTTGGCCTATTTTTTGCCAAGACAGCCTGCCTATTGTATATTTAGGAATCAAATATTCATTTTTTC TGTTTGTAAAGCCAGAAATATTTCAGTTAAAAAGAATATAATTTTATATTATTTTAATAATTCTTTTTAAGTAAAGTAGGAAAATTTCTG CCACCTGAGATGTTACTGTTTTTATTTATATGAAAATTCCATTTTTTTCTTTATGACTCTTTTCCCATACCATTATGATATGTTCAGCAT TAGTATTTTCCATTTTACCACTAAACAAATAAGCCAGGACTAATAACAATAGCAGTTTGAGAGTTTTTATTTTGGCATTTTGGTTTTAAT TAGGAAAGAAAACATGGATGCTATTAAAACTAGTTGTAGTTAAAAATGTTTTGAATGAGGCTACTAACGCTATCTTAGTCATCTCAAAGA GAAAGAGAAGAAGTAAAATTTTAAATACCTTTTTGGCATTTTTAACCAATTCATATGAACAAAAACATATATTCTATTAAAGCAAAATAA AGAATAGTTTAAAACACTAGTCTTCTTGCATGTGAATATTTTCCCCCTAACAGACAAGATAGAATCCATTTCTGGACACTCTAAAAGAAA GTAATGTTAATTGAGAGAGCTGTCTCCAAATGGAACTCAACCTGACCAGAATCCCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCA TAAGTTTTATTCTGAGACGAGATGCTTTATGGCTGCTGGCTGCATTATGGCATCTAGCAGTCCCCACTGGTTTGTGGGAACAAAACACAT GGATTGATATTCAATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGGCACAACAAATAAGAAGGTGCCAG AGGTAGGGAAGGGTCTGAGAGGGGTAGTTGCAGAAGCATTTAGCTTTCATAGATGAGGGGAGAGTTTTTTGGTTTTATGAAGATTAGGCA GCCCTCCTGAGGAAAGTATTAAGGATAGAATGAGACACTTGTCTTGGTGGTTTGGTGAAGTCGTGTCGAAGGCAAAAGGATGAACTACAC ATATTTTGAGCATGATTTAGTAATATTGTTTGCAAGTTGAGAAACAGAAATTCAGCCATTCTCCTGACTGATGGTAGGTGAAATTCTTCC CAATATTAGAGCCAATCTGGGTTACCATACGTTCATATATTTAACAGCTATTTGTTAAACAACTGTGATGTTCCAGGCACTGTTCTAGGT TCTTAGGATACACCATATAACAAAACAAATAGTGATCCTTGCCCTCATGTGCCAGCTCTGTGTTAAATGCTAACTATTATCTTATTCAAT CCTCCAAATAACCCTATAGGATATATATCATTCCACAGACAAGGAAGCTGAGGGTTAAATGGGATAAGAATCTTGCTCAAAGTCTCACTG GCTTTAAAATATTAATATATATTTTACATCATTCAAGACAGATATATAATTAGCTGAATATTCTCACCTCTATTAACTGAATGTAGAGTG TCAGGTACATGGGAAGTAAGTTATTTACGTGATCTGAAATAAGAGGACAACCTTTGCCAAATTACTTTTATTACCATGGAGAAGAAAGCT TCAATGAAATGCCTGTTTCAGCCCATCTTCAGTATTGGTTGGTTAATACCATTTGTTAACACCAATCCTTTCCTCTTTTACTGCTAACAT GTGACTGTGTTTAAAATTATAGATTGCAGCAGAGTGTTGGCCAAGGATTATTGTAGTAGGATAAAGTTTCCCTGTATTTGAAATTTACCC AAACTGTAGCAAATACATCTTTCCTTCTTTATGGAGGTCACACGTGTGCATAGTATGTGCCTGAATACAGGTAAACTTTGTGTTTTAAAA TTACATGGCCTTTTTTAGAGTCGACTGAAGGCTAGACTCTTCTTGCCCATGTTGCTGGATAGGCTTTCAAATCTCAGGCCTTGGAGAGTT AAATGACTTTCTGATATTTCTTACGGTGGAGCCACATAAGAAATACACACATTCCTAGTTTGAGCAATGGATGTGTATATTGGGGATCTT CACTTTTATGTATCTGGTAGTCATGATGGTGCCTATTCCCAACTGTAGGAAAGGAAAGCCCTCAAGGAGAAAATTCTCTTTCAAAAAGGC TCAGATTTCTAACAATTATGTCTAAATGTTTCTTCAATTTAGAACATGTACAAAAGCTACTTAATATTAGCAGAGTAGTTCTTGTGTTTT CATTTCAAATGAAATATTCCCAGTTCCAAAGTTTATTTCCTTGGCATTTTCAAGAAGGATGGTTATTTTTAGTTCTGGTTATTTGGTGTT GGAGGTCTGTGACACTTCCTTATACATTTAAAGCCCCCTTTGAATAGTTGTATCAATAGTTCAAAAGCCTGTAGATATCTTGCTTTTCTA TTCTGACAGCCCAGCTTCTGCAGACTCAGGCCAACCTTAGGTATGTCACATCAGTTCCCCATCTGTGTAAATTACCTGAACCTCTCTGTG GTATTCACTGAGAGTTGAGCTTCTACTAAGGGATTTCCTTGACCTGGGCTTTTAACACCAGATTTGTAGTGGAGTGTTTATTAGTAAAGC AAAGGAGTAAGTCAGAGATGCTAGCCCCTGCTCTCAGTTAAACAGAACTATCCTCCTTCCTGAATATTTAAACATAAAATTAATTTTAAA CTACTATAAAAATCATGTTCCATTGCTTGCCAAATCTTATACCATTATAATGCTGTATTTTTACATGTTAGTATACATTGTGTCCATAGG GATATAAATATGAGAATTTCAGCAACTGTCTTGCAGGGTTAAGATGTGCTATTTGTTGATTTTGCAAATTTTTCTCATGTGGTACAGTCC CTCCAAAGAAAATTTCCTTAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTTCCTGAAAACAGAAGTAGA CATATTTTATGCCCAATTTAGTACCTAATAATTGAGGCTTAAAACAAAATTTTCTTGGGCAAGTTGGGTGATTAAATATGAATTAAAACT TCTAGAGAAAGATTTCCAGATGCCCCTGTTTTCCATTTTGATTATGGTTTTAGTTTCATAGCAACTTGGGGGAAAAAAATCATTTACTTT ATGTCGTATTACAACAACAACTTTGACAGCTTAAATGTAGTGACCTCTCTGAAGGTAATATGCACATTATAATTTAGGATGAAAGCAGAT TTAAACTAAGACTTTCTGAGATGAAATAAAAGTAACCAATTCATAATAGTCATGTTTATTGCAGCAATATCTTGGGAACTTAAGTTTAGT GGCGTTTGAGGTGTTTCTGACTATCTTGCTTGTTCATTTCACCCTGCTCTGCAGAGACAGAATATGATTGAATGAACTGCCCATTATATT AATGACCAGTTCAAAGCAGTTTTGTGCTTTGGCTATAGATAAAATTTGGCAAAAATACTGTAGGCCTTTCTGGTCCATATTTATCCTTAA AGTATTTTTGCCAATCAATAAAAATGAAATATTTATCCAGAAATAGAAAAAGCTCTTTCCTATGACATTGACATAGAAGCCCAAATACTC CTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAACTGAATCAATGATTTTTTTTAGTTGTGCTCTTAATTGCATTATTTCACATATGTAA CACTGGGTTTGTTTTGGTTATATAGTATTATTTTACTTTATTCTAATTTCAACTCATGTCACTCTGTAGCTCATTAAGAATTTGTTCAAC >In-frame_ENST00000399262_ENST00000433211_TCGA-13-0891_JMJD1C_chr10_65024410_-_CTNNA3_chr10_68979628_length(amino acids)=863AA_start in transcript=183_stop in transcript=2774 MEEAAAASAATAMAVETRAELVGKRFLCVAVGDEARSERWESGRGWRSWRAGVIRAVSHRDSRNPDLAVYVEFDDLEWDKREWVKVYEDF STFLVEYHLIWAKRNDPSQTQGSKSKQIQWPALTFKPLVERNIPSSVTAVEFLVDKQLDFLTEDSAFQPYQDLKSPNQRDEIAGARASLK ENSPLLHSICSACLEHSDVASLKASKDTVCEEIQNALNVISNASQGIQNMTTPPEPQAATLGSALDELENLIVLNPLTVTEEEIRPSLEK RLEAIISGAALLADSSCTRDLHRERIIAECNAIRQALQDLLSEYMNNAGKKERSNTLNIALDNMCKKTRDLRRQLRKAIIDHVSDSFLDT TVPLLVLIEAAKNGREKEIKEYAAIFHEHTSRLVEVANLACSMSTNEDGIKIVKIAANHLETLCPQIINAALALAARPKSQAVKNTMEMY KRTWENHIHVLTEAVDDITSIDDFLAVSESHILEDVNKCIIALRDQDADNLDRAAGAIRGRAARVAHIVTGEMDSYEPGAYTEGVMRNVN FLTSTVIPEFVTQVNVALEALSKSSLNVLDDNQFVDISKKIYDTIHDIRCSVMMIRTPEELEDVSDLEEEHEVRSHTSIQTEGKTDRAKM TQLPEAEKEKIAEQVADFKKVKSKLDAEIEIWDDTSNDIIVLAKNMCMIMMEMTDFTRGKGPLKHTTDVIYAAKMISESGSRMDVLARQI ANQCPDPSCKQDLLAYLEQIKFYSHQLKICSQVKAEIQNLGGELIMSALDSVTSLIQAAKNLMNAVVQTVKMSYIASTKIIRIQSPAGPR -------------------------------------------------------------- >In-frame_ENST00000399262_ENST00000373744_TCGA-13-0891_JMJD1C_chr10_65024410_-_CTNNA3_chr10_68979628_length(transcript)=3086nt_BP=666nt CACAAGGCTGCGAATCTGGGAGTCCAAAGGAGTGTTTGCGGGGAGGGCCCGAGGTCGCTGTGTCCGGGGCAGAGCGGCCGGTTCGTCCCG AGTCTGCGCTCTTTCGGGTCCGCTGCTGTGTCCCGGTCCGCTCTCCTCAGCATGAGCGGCCGGTAGGAGTGAGGTTTCATCGGTTCCCTC GCACTGGAGGAGGCAGCGGCCGCTTCGGCAGCGACAGCTATGGCGGTAGAGACGCGGGCAGAGCTGGTGGGTAAGCGGTTCCTGTGTGTG GCGGTCGGCGACGAGGCACGTTCGGAGCGCTGGGAGAGCGGACGCGGCTGGCGAAGCTGGCGAGCGGGGGTCATCCGAGCCGTGTCACAC AGGGACAGCCGCAATCCGGACCTGGCGGTGTATGTGGAATTTGATGATCTTGAATGGGATAAACGAGAGTGGGTTAAAGTTTATGAAGAT TTTTCAACTTTCTTGGTGGAATACCACTTAATCTGGGCCAAAAGGAATGACCCTAGCCAGACTCAGGGATCAAAGAGCAAACAGATTCAG TGGCCTGCATTGACTTTCAAACCTCTGGTTGAAAGAAATATACCCAGTTCAGTCACTGCAGTAGAATTCCTTGTAGATAAGCAACTGGAT TTTTTAACTGAAGATAGTGCCTTTCAGCCCTACCAGGACTTAAAATCTCCAAATCAGAGAGATGAAATTGCAGGAGCCCGAGCTTCACTG AAGGAGAACTCTCCCCTCTTGCATTCAATTTGTTCAGCTTGTTTGGAGCATTCTGATGTTGCTTCCCTCAAAGCAAGCAAGGACACAGTT TGTGAAGAAATTCAGAATGCTCTCAATGTAATTTCAAATGCTTCACAAGGGATCCAGAATATGACAACCCCACCAGAACCTCAGGCAGCA ACCCTGGGAAGTGCCCTTGATGAGCTGGAGAATTTAATTGTCCTGAATCCACTCACAGTAACTGAGGAGGAAATACGACCATCACTAGAG AAACGCCTTGAAGCCATTATCAGTGGGGCTGCTCTGCTGGCGGATTCTTCATGTACGAGGGACTTACACCGAGAGCGGATTATCGCAGAA TGCAACGCCATTCGCCAGGCTCTTCAGGATCTGCTTTCAGAGTACATGAACAACGCTGGAAAAAAAGAAAGGAGTAATACCCTGAATATT GCTTTAGACAACATGTGTAAGAAGACAAGAGACCTTCGCAGACAGCTCCGCAAGGCTATTATAGATCATGTGTCAGACTCTTTCCTGGAT ACGACAGTCCCTCTTTTGGTTCTCATTGAAGCTGCTAAGAATGGCCGGGAAAAGGAAATAAAAGAATATGCTGCGATATTTCATGAACAC ACCAGCAGGCTTGTAGAGGTGGCAAATCTTGCTTGTTCCATGTCAACAAATGAAGATGGAATTAAAATTGTCAAAATTGCAGCCAATCAT TTGGAAACCTTGTGTCCACAGATTATTAATGCTGCACTTGCTTTGGCTGCAAGACCCAAAAGTCAAGCGGTCAAAAACACCATGGAAATG TACAAGCGTACATGGGAGAATCATATACATGTCCTCACTGAAGCCGTAGATGACATTACAAGCATTGATGACTTCCTTGCTGTATCTGAA AGCCATATCTTGGAAGATGTCAACAAGTGTATCATAGCCTTAAGAGACCAGGATGCTGATAATTTAGACCGTGCTGCGGGTGCTATCAGA GGCCGGGCAGCAAGAGTTGCTCACATCGTCACGGGTGAAATGGACAGTTACGAGCCAGGGGCTTACACGGAAGGTGTAATGAGAAATGTT AACTTCCTTACAAGTACTGTAATTCCTGAATTTGTAACACAAGTGAATGTTGCCTTGGAAGCCTTAAGCAAAAGCTCATTGAATGTGTTG GATGATAATCAATTTGTGGACATCTCAAAGAAGATCTATGATACAATTCATGATATCAGATGTTCAGTCATGATGATTCGGACCCCAGAG GAACTGGAGGATGTTTCTGACCTTGAAGAGGAACACGAGGTCCGCAGTCACACCAGCATTCAGACCGAAGGGAAAACTGATAGGGCTAAG ATGACTCAACTGCCTGAGGCAGAAAAAGAAAAGATTGCTGAGCAAGTTGCTGATTTCAAGAAAGTAAAGAGTAAGCTGGATGCTGAGATT GAGATATGGGATGATACAAGCAACGACATCATTGTTCTGGCCAAGAACATGTGTATGATCATGATGGAGATGACAGACTTCACTAGGGGC AAAGGACCACTAAAGCATACAACTGATGTGATCTATGCAGCGAAAATGATATCAGAATCAGGATCAAGGATGGATGTCCTTGCTCGGCAG ATTGCTAATCAGTGCCCAGATCCATCTTGTAAACAGGACTTGTTGGCCTACCTGGAACAGATTAAGTTCTACTCCCACCAACTGAAAATC TGCAGTCAAGTTAAAGCTGAGATCCAGAACCTGGGAGGAGAGCTCATCATGTCAGCTTTGGACAGTGTCACATCCCTGATCCAAGCAGCC AAAAATTTAATGAATGCTGTAGTGCAAACAGTGAAAATGTCTTACATTGCCTCAACCAAGATCATCCGAATCCAGAGTCCTGCTGGGCCC CGGCACCCAGTTGTGATGTGGAGAATGAAGGCTCCTGCAAAAAAACCCTTGATTAAAAGAGAGAAGCCAGAGGAAACGTGTGCAGCTGTC AGACGAGGCTCAGCAAAGAAAAAAATCCATCCATTGCAAGTCATGAGTGAATTTAGAGGAAGACAAATCTACTGAAACCACTATTCTACA TATAGTGCCTATATGACAAAATCCTGCCTAACCACACTGCTTTATTTTACACTTAAGAAGTTCTGTAATTTCACTAAGTTTTGGTGTTTA ACTCACAAATAACATAAAATATTGGGCGCTAAATCAACAAAAGCAATATATATTTGGGATCATATCACTGTCATTTCTGTATGGTCAGCA CCTAATAGTTAAGGAATATTTGCTTGTTGAATGAATGAAATTATCACGTGTCATTCAGCGTTTCCCATCATAGAGATTATCTACTATTCG >In-frame_ENST00000399262_ENST00000373744_TCGA-13-0891_JMJD1C_chr10_65024410_-_CTNNA3_chr10_68979628_length(amino acids)=863AA_start in transcript=183_stop in transcript=2774 MEEAAAASAATAMAVETRAELVGKRFLCVAVGDEARSERWESGRGWRSWRAGVIRAVSHRDSRNPDLAVYVEFDDLEWDKREWVKVYEDF STFLVEYHLIWAKRNDPSQTQGSKSKQIQWPALTFKPLVERNIPSSVTAVEFLVDKQLDFLTEDSAFQPYQDLKSPNQRDEIAGARASLK ENSPLLHSICSACLEHSDVASLKASKDTVCEEIQNALNVISNASQGIQNMTTPPEPQAATLGSALDELENLIVLNPLTVTEEEIRPSLEK RLEAIISGAALLADSSCTRDLHRERIIAECNAIRQALQDLLSEYMNNAGKKERSNTLNIALDNMCKKTRDLRRQLRKAIIDHVSDSFLDT TVPLLVLIEAAKNGREKEIKEYAAIFHEHTSRLVEVANLACSMSTNEDGIKIVKIAANHLETLCPQIINAALALAARPKSQAVKNTMEMY KRTWENHIHVLTEAVDDITSIDDFLAVSESHILEDVNKCIIALRDQDADNLDRAAGAIRGRAARVAHIVTGEMDSYEPGAYTEGVMRNVN FLTSTVIPEFVTQVNVALEALSKSSLNVLDDNQFVDISKKIYDTIHDIRCSVMMIRTPEELEDVSDLEEEHEVRSHTSIQTEGKTDRAKM TQLPEAEKEKIAEQVADFKKVKSKLDAEIEIWDDTSNDIIVLAKNMCMIMMEMTDFTRGKGPLKHTTDVIYAAKMISESGSRMDVLARQI ANQCPDPSCKQDLLAYLEQIKFYSHQLKICSQVKAEIQNLGGELIMSALDSVTSLIQAAKNLMNAVVQTVKMSYIASTKIIRIQSPAGPR -------------------------------------------------------------- >In-frame_ENST00000399262_ENST00000545309_TCGA-13-0891_JMJD1C_chr10_65024410_-_CTNNA3_chr10_68979628_length(transcript)=1218nt_BP=666nt CACAAGGCTGCGAATCTGGGAGTCCAAAGGAGTGTTTGCGGGGAGGGCCCGAGGTCGCTGTGTCCGGGGCAGAGCGGCCGGTTCGTCCCG AGTCTGCGCTCTTTCGGGTCCGCTGCTGTGTCCCGGTCCGCTCTCCTCAGCATGAGCGGCCGGTAGGAGTGAGGTTTCATCGGTTCCCTC GCACTGGAGGAGGCAGCGGCCGCTTCGGCAGCGACAGCTATGGCGGTAGAGACGCGGGCAGAGCTGGTGGGTAAGCGGTTCCTGTGTGTG GCGGTCGGCGACGAGGCACGTTCGGAGCGCTGGGAGAGCGGACGCGGCTGGCGAAGCTGGCGAGCGGGGGTCATCCGAGCCGTGTCACAC AGGGACAGCCGCAATCCGGACCTGGCGGTGTATGTGGAATTTGATGATCTTGAATGGGATAAACGAGAGTGGGTTAAAGTTTATGAAGAT TTTTCAACTTTCTTGGTGGAATACCACTTAATCTGGGCCAAAAGGAATGACCCTAGCCAGACTCAGGGATCAAAGAGCAAACAGATTCAG TGGCCTGCATTGACTTTCAAACCTCTGGTTGAAAGAAATATACCCAGTTCAGTCACTGCAGTAGAATTCCTTGTAGATAAGCAACTGGAT TTTTTAACTGAAGATAGTGCCTTTCAGCCCTACCAGGACTTAAAATCTCCAAATCAGAGAGATGAAATTGCAGGAGCCCGAGCTTCACTG AAGGAGAACTCTCCCCTCTTGCATTCAATTTGTTCAGCTTGTTTGGAGCATTCTGATGTTGCTTCCCTCAAAGCAAGCAAGGACACAGTT TGTGAAGAAATTCAGAATGCTCTCAATGTAATTTCAAATGCTTCACAAGGGATCCAGAATATGACAACCCCACCAGAACCTCAGGCAGCA ACCCTGGGAAGTGCCCTTGATGAGCTGGAGAATTTAATTGTCCTGAATCCACTCACAGTAACTGAGGAGGAAATACGACCATCACTAGAG AAACGCCTTGAAGCCATTATCAGTGGGGCTGCTCTGCTGGCGGATTCTTCATGTACGAGGGACTTACACCGAGAGCGGATTATCGCAGAA TGCAACGCCATTCGCCAGGCTCTTCAGGATCTGCTTTCAGAGTACATGAACAACCTCTGTAATCAAAAGTCTGACCTGGGCCTCACTGGA >In-frame_ENST00000399262_ENST00000545309_TCGA-13-0891_JMJD1C_chr10_65024410_-_CTNNA3_chr10_68979628_length(amino acids)=344AA_start in transcript=183_stop in transcript=1217 MEEAAAASAATAMAVETRAELVGKRFLCVAVGDEARSERWESGRGWRSWRAGVIRAVSHRDSRNPDLAVYVEFDDLEWDKREWVKVYEDF STFLVEYHLIWAKRNDPSQTQGSKSKQIQWPALTFKPLVERNIPSSVTAVEFLVDKQLDFLTEDSAFQPYQDLKSPNQRDEIAGARASLK ENSPLLHSICSACLEHSDVASLKASKDTVCEEIQNALNVISNASQGIQNMTTPPEPQAATLGSALDELENLIVLNPLTVTEEEIRPSLEK -------------------------------------------------------------- >In-frame_ENST00000399262_ENST00000433211_TCGA-13-0891-01A_JMJD1C_chr10_65024411_-_CTNNA3_chr10_68979628_length(transcript)=10587nt_BP=666nt CACAAGGCTGCGAATCTGGGAGTCCAAAGGAGTGTTTGCGGGGAGGGCCCGAGGTCGCTGTGTCCGGGGCAGAGCGGCCGGTTCGTCCCG AGTCTGCGCTCTTTCGGGTCCGCTGCTGTGTCCCGGTCCGCTCTCCTCAGCATGAGCGGCCGGTAGGAGTGAGGTTTCATCGGTTCCCTC GCACTGGAGGAGGCAGCGGCCGCTTCGGCAGCGACAGCTATGGCGGTAGAGACGCGGGCAGAGCTGGTGGGTAAGCGGTTCCTGTGTGTG GCGGTCGGCGACGAGGCACGTTCGGAGCGCTGGGAGAGCGGACGCGGCTGGCGAAGCTGGCGAGCGGGGGTCATCCGAGCCGTGTCACAC AGGGACAGCCGCAATCCGGACCTGGCGGTGTATGTGGAATTTGATGATCTTGAATGGGATAAACGAGAGTGGGTTAAAGTTTATGAAGAT TTTTCAACTTTCTTGGTGGAATACCACTTAATCTGGGCCAAAAGGAATGACCCTAGCCAGACTCAGGGATCAAAGAGCAAACAGATTCAG TGGCCTGCATTGACTTTCAAACCTCTGGTTGAAAGAAATATACCCAGTTCAGTCACTGCAGTAGAATTCCTTGTAGATAAGCAACTGGAT TTTTTAACTGAAGATAGTGCCTTTCAGCCCTACCAGGACTTAAAATCTCCAAATCAGAGAGATGAAATTGCAGGAGCCCGAGCTTCACTG AAGGAGAACTCTCCCCTCTTGCATTCAATTTGTTCAGCTTGTTTGGAGCATTCTGATGTTGCTTCCCTCAAAGCAAGCAAGGACACAGTT TGTGAAGAAATTCAGAATGCTCTCAATGTAATTTCAAATGCTTCACAAGGGATCCAGAATATGACAACCCCACCAGAACCTCAGGCAGCA ACCCTGGGAAGTGCCCTTGATGAGCTGGAGAATTTAATTGTCCTGAATCCACTCACAGTAACTGAGGAGGAAATACGACCATCACTAGAG AAACGCCTTGAAGCCATTATCAGTGGGGCTGCTCTGCTGGCGGATTCTTCATGTACGAGGGACTTACACCGAGAGCGGATTATCGCAGAA TGCAACGCCATTCGCCAGGCTCTTCAGGATCTGCTTTCAGAGTACATGAACAACGCTGGAAAAAAAGAAAGGAGTAATACCCTGAATATT GCTTTAGACAACATGTGTAAGAAGACAAGAGACCTTCGCAGACAGCTCCGCAAGGCTATTATAGATCATGTGTCAGACTCTTTCCTGGAT ACGACAGTCCCTCTTTTGGTTCTCATTGAAGCTGCTAAGAATGGCCGGGAAAAGGAAATAAAAGAATATGCTGCGATATTTCATGAACAC ACCAGCAGGCTTGTAGAGGTGGCAAATCTTGCTTGTTCCATGTCAACAAATGAAGATGGAATTAAAATTGTCAAAATTGCAGCCAATCAT TTGGAAACCTTGTGTCCACAGATTATTAATGCTGCACTTGCTTTGGCTGCAAGACCCAAAAGTCAAGCGGTCAAAAACACCATGGAAATG TACAAGCGTACATGGGAGAATCATATACATGTCCTCACTGAAGCCGTAGATGACATTACAAGCATTGATGACTTCCTTGCTGTATCTGAA AGCCATATCTTGGAAGATGTCAACAAGTGTATCATAGCCTTAAGAGACCAGGATGCTGATAATTTAGACCGTGCTGCGGGTGCTATCAGA GGCCGGGCAGCAAGAGTTGCTCACATCGTCACGGGTGAAATGGACAGTTACGAGCCAGGGGCTTACACGGAAGGTGTAATGAGAAATGTT AACTTCCTTACAAGTACTGTAATTCCTGAATTTGTAACACAAGTGAATGTTGCCTTGGAAGCCTTAAGCAAAAGCTCATTGAATGTGTTG GATGATAATCAATTTGTGGACATCTCAAAGAAGATCTATGATACAATTCATGATATCAGATGTTCAGTCATGATGATTCGGACCCCAGAG GAACTGGAGGATGTTTCTGACCTTGAAGAGGAACACGAGGTCCGCAGTCACACCAGCATTCAGACCGAAGGGAAAACTGATAGGGCTAAG ATGACTCAACTGCCTGAGGCAGAAAAAGAAAAGATTGCTGAGCAAGTTGCTGATTTCAAGAAAGTAAAGAGTAAGCTGGATGCTGAGATT GAGATATGGGATGATACAAGCAACGACATCATTGTTCTGGCCAAGAACATGTGTATGATCATGATGGAGATGACAGACTTCACTAGGGGC AAAGGACCACTAAAGCATACAACTGATGTGATCTATGCAGCGAAAATGATATCAGAATCAGGATCAAGGATGGATGTCCTTGCTCGGCAG ATTGCTAATCAGTGCCCAGATCCATCTTGTAAACAGGACTTGTTGGCCTACCTGGAACAGATTAAGTTCTACTCCCACCAACTGAAAATC TGCAGTCAAGTTAAAGCTGAGATCCAGAACCTGGGAGGAGAGCTCATCATGTCAGCTTTGGACAGTGTCACATCCCTGATCCAAGCAGCC AAAAATTTAATGAATGCTGTAGTGCAAACAGTGAAAATGTCTTACATTGCCTCAACCAAGATCATCCGAATCCAGAGTCCTGCTGGGCCC CGGCACCCAGTTGTGATGTGGAGAATGAAGGCTCCTGCAAAAAAACCCTTGATTAAAAGAGAGAAGCCAGAGGAAACGTGTGCAGCTGTC AGACGAGGCTCAGCAAAGAAAAAAATCCATCCATTGCAAGTCATGAGTGAATTTAGAGGAAGACAAATCTACTGAAACCACTATTCTACA TATAGTGCCTATATGACAAAATCCTGCCTAACCACACTGCTTTATTTTACACTTAAGAAGTTCTGTAATTTCACTAAGTTTTGGTGTTTA ACTCACAAATAACATAAAATATTGGGCGCTAAATCAACAAAAGCAATATATATTTGGGATCATATCACTGTCATTTCTGTATGGTCAGCA CCTAATAGTTAAGGAATATTTGCTTGTTGAATGAATGAAATTATCACGTGTCATTCAGCGTTTCCCATCATAGAGATTATCTACTATTCG TTACCAAATAAACACAGGAGAGGCCAGAGAGTCCTGTTTATCTGTAATACTTCATGTACACTTATCATCCTTATCTTGAATTAAAACACT AACATGAGCTCCTAACTTGGTTTTTTAATAGAAACAAAAGACTTTTATAAAATATTTTCCCATTTAATCTCCATGCTTTCTTTATCTGAT CTAACCTGGCACCTAACCAGGCAGAAATGTATGATTCCTGCCATAGCAAAAAAACCACCTTTTAATCTCTAGATAGCTGTACTCATTGTC AACTTATTAGGCTAATATCCATTATAAACTAATCAAATTTGAATAGTTAGGCTACTTGCTGGATTTTGAAGGTCAACCTTGTTTATTAAT AAAATGCTTTCTTAACATTATAAAGGTTACAATGAGTTCTGATGCCACATACTCACCTTTTGGGTTTCCAATGTGTTAGAGAGTTCTGTA CTTTTGAGTGTTAGGCCTATCCGAATACATATGTGAAAGAAGAGTTATCACCCATTGGGAAAATGAGACAACAAACTATATCCCAAAGTG AGTTATATTAATAATAACAGAAGTGTAAGTTCTGTATGACCCTATTTTTACAAACATAAAAATACATTTTTATCAGCTTGCAATTGTAAT TAAAAGGAAAATGGCAGTTTGAAAAATCTTTTGACGTTGAGTAAAATATAACTGCATGAACTGTACCATTGAACTATGAAGCAGTTAATG GCAATGAAGCTGGAGTGATTTTAATAACGTTCTTTTAAATAAAAGTCACTGGGGTCATTTTACAACTCCAGTCACTGTGTTCATTCCTAG TTGAGTTCATAATGGACTTCATAATAGTCTTAGAGTCTAGTGTACCTCTCTCTGTCATTCTCTCTCTCTTTTTCTCTCCCCTGATGACCT GCCTCTCTCTGTCTTTCAAAAATGTCCTTAACAGAAACTCTTTGGAGGCCATAAGTTTTGTTTTCATTTTTTCTCATTCATAGAGTTCTG ATTCACAGACTTTAAAAAACATTTTCTATTCTACATTATCATAATAGTATTATATTGTACCTTTTTACTTCTAAAACATTGCCATTGATG AGAGGCGTCTCAGCAACGATGTAACCTTAGATTGATGAGAAAAAAATTTACACATACAATACCAGTTGATATTAGGAGAACCAGTTTGGG TAAAAGGATGCATGAAACATAGAAAAGCATAAAGATTGACAGTACGATATGTGTGGAATCTTAAGCATAATGGTATGGGAAAAGAAGGAT CTATTTAATAGGTCATTATTAATTATGCAGGAAATGTTAAATTTCTTGTAATGAATTATTTCAATCTTCCAAGTAGCTGGATTGCCTGAG CTCAGTGTAAAACTTCCTAGGAGGTGAAGGCAATAAACTCCTCCCTGTTTTGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAA TGCACTGCCCAGAAGAAAAGGCAGTGAAGAAGGGAATTAGGGAATTCAGATGACTCTGTTTTTCAGAATTATCTAGATGATTGAGGCAAA TAGAGATTTTCTTTTATTGAAATGCTGCCATCATTTTCTGCTCTAAGTGTAGATGTTGCACGAGTGACATCTGTGGTATATCCTTCTTCC AGATAGAAGTATAAATTTATAATTTAGTGGGGAGAGGAATTTTCTTTTAATCACCAAACTACCAGCTGTATAGAAAATTTTTTTGAAATC ACCAAACTAGCAGTTGTGTATCTTAGCTCCTAAAGCCACATTCACAAGAATCATAAGCATCTCATTTAGAAAATCTAATGTCCACCGGAC CCAACATCATCTTTCCACATGTTGGAGTTTAGAACATGCAGTATTGGACACCAAAAGAACAGAAATAACTTGAAATTATACAATTACCAA ATAACCTCCATCTCTTTGATAAAAATGACTTTTTACCCAAAGTGAGATGTGAACAAGTTCTCCTCTTTAACCCAGGCAGATTTTCAGCTT AGCTCAAAGCAAACTATAATTAAATAAAACAATAAAAATTTTAACTCAATGAATATCCTAGGAGTTAATCTGCTGTGGTAATCGATAGTG ACATAAAAACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAGTAGGCAGCATTTCAAGATTTAGTTTGAT TCAAACCTGCTGATAAAACAAATGCTTATATGCAAGAAAAACTAGCAGCAAGATATGAATAAATCTCCCCATTATGTTAAAAACTAATCA GCATGACACATTTATATTTAGGTATTTCTTCTGCAGAGGATTGCCAGAAATTTCTTAATGAGAGTGATAATTTGGTGATCCACCTATGTA CCTTTTGATGTCTCATCACAGAGATTAGTGCTTCCTCTGATAATACATTTGCTTGATCCTGCTAATAAGAACTCACCTTTCTTTTTAACG AAATCAATTTGTGTTAATTTACATAGGGAAAAACGTTCCTTGAGAGGGAGGAGAGGGGTGTTTACCACCCACAGGAGCAGTTCCATCCCT GGTTACCCACCAGTATCCCTGCCAGATGTTAGACTGGAATTAGAATGAAAATTTAAAAAAAAACGAAATAATAATCCACTAAATGGCCTT CTAATTAGAGAAATTTGAAGATTTCTATCAAATATAAAAAGTGAGAAATAGAAATCATTCCCTTTAATTTATGACAAATTAAAATTATTG AAGTAAAATGTTTCTAAGTCAGTTTCTGGATAGTTCTTGAATGAGTCAAGAAAAAACTCAAACACTAAATTTCTAAGCTAATTTGTTCAT TATTCCTTTCTGTTTATTATTTATTATATGAGTGCAAATTGCAAATGTATTAGAAAAGACAATATAGCCTTCACATTCACAAGTGTGCCT TCTGGCCTTTGAAATCTTTTAACATAAGATCAATATAACATATTTGTTCCCCATAAAAATCTCTTATGTACAGGGAATAAGGTCCTCCAT AGCTACACAGAGACACCCATTCTTGCAGTCTGGCATTCTTAACACCTTTAGCTTCAAAGGCAGTCGGTTTCAATTTCAAGCTAAAATTGT GAATATACAATTAAGTGCGCAACTTGGGCCTTCAGACCAAATAATTAATGCTCCTCAAATTAAATAATGAGTGGCTGAAAAGCCTAATGT GTAACAACAGAGTAAGTGACTTCAACGGCTTCCTGAACCTTCATTTTGAGGGTGTTCTCATCTCACCCACCTCTGGGCTAGGTATCCTCT GTTAATTGCTAACAATTTCCTACCAAAATAGTGCAATCAGGACTGCCCATCACAGCAAATTACTCCAATTAATGCCCTTTCCTCTTCTGT GAACCAAAAATATCTCTCTCCTGTCTCTCATCTCTATCCCAGGTATAAATTGACTAATAAATTTTACAGAGTTTTAGTCAAAATTATGAA TTTTAATTTCCAGCAACATTATTCCTTTAGTCTTTCTATTCCCCAAAACATTCTTAAATTTTGGTATCAAATGTTCATTTCTGTCCTAGA GATTGTGGTTCCCATGGCTACAGATTTTTGTATAGTGGTAGTATGAGTGGAATAAGATCTGAGACTTTTCCTGGTGATATCCACCATTCT CTTGTGAACTCATTGCAGAATAAACAGCCTCTTTCACTTTCATTGTAAGTAGTTCTTTAGGTTGGCAAAGCAGGCACCAGAATCTGAATT TGAATGAAATCTGTACTTTCTTTTGTTGGCCTATTTTTTGCCAAGACAGCCTGCCTATTGTATATTTAGGAATCAAATATTCATTTTTTC TGTTTGTAAAGCCAGAAATATTTCAGTTAAAAAGAATATAATTTTATATTATTTTAATAATTCTTTTTAAGTAAAGTAGGAAAATTTCTG CCACCTGAGATGTTACTGTTTTTATTTATATGAAAATTCCATTTTTTTCTTTATGACTCTTTTCCCATACCATTATGATATGTTCAGCAT TAGTATTTTCCATTTTACCACTAAACAAATAAGCCAGGACTAATAACAATAGCAGTTTGAGAGTTTTTATTTTGGCATTTTGGTTTTAAT TAGGAAAGAAAACATGGATGCTATTAAAACTAGTTGTAGTTAAAAATGTTTTGAATGAGGCTACTAACGCTATCTTAGTCATCTCAAAGA GAAAGAGAAGAAGTAAAATTTTAAATACCTTTTTGGCATTTTTAACCAATTCATATGAACAAAAACATATATTCTATTAAAGCAAAATAA AGAATAGTTTAAAACACTAGTCTTCTTGCATGTGAATATTTTCCCCCTAACAGACAAGATAGAATCCATTTCTGGACACTCTAAAAGAAA GTAATGTTAATTGAGAGAGCTGTCTCCAAATGGAACTCAACCTGACCAGAATCCCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCA TAAGTTTTATTCTGAGACGAGATGCTTTATGGCTGCTGGCTGCATTATGGCATCTAGCAGTCCCCACTGGTTTGTGGGAACAAAACACAT GGATTGATATTCAATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGGCACAACAAATAAGAAGGTGCCAG AGGTAGGGAAGGGTCTGAGAGGGGTAGTTGCAGAAGCATTTAGCTTTCATAGATGAGGGGAGAGTTTTTTGGTTTTATGAAGATTAGGCA GCCCTCCTGAGGAAAGTATTAAGGATAGAATGAGACACTTGTCTTGGTGGTTTGGTGAAGTCGTGTCGAAGGCAAAAGGATGAACTACAC ATATTTTGAGCATGATTTAGTAATATTGTTTGCAAGTTGAGAAACAGAAATTCAGCCATTCTCCTGACTGATGGTAGGTGAAATTCTTCC CAATATTAGAGCCAATCTGGGTTACCATACGTTCATATATTTAACAGCTATTTGTTAAACAACTGTGATGTTCCAGGCACTGTTCTAGGT TCTTAGGATACACCATATAACAAAACAAATAGTGATCCTTGCCCTCATGTGCCAGCTCTGTGTTAAATGCTAACTATTATCTTATTCAAT CCTCCAAATAACCCTATAGGATATATATCATTCCACAGACAAGGAAGCTGAGGGTTAAATGGGATAAGAATCTTGCTCAAAGTCTCACTG GCTTTAAAATATTAATATATATTTTACATCATTCAAGACAGATATATAATTAGCTGAATATTCTCACCTCTATTAACTGAATGTAGAGTG TCAGGTACATGGGAAGTAAGTTATTTACGTGATCTGAAATAAGAGGACAACCTTTGCCAAATTACTTTTATTACCATGGAGAAGAAAGCT TCAATGAAATGCCTGTTTCAGCCCATCTTCAGTATTGGTTGGTTAATACCATTTGTTAACACCAATCCTTTCCTCTTTTACTGCTAACAT GTGACTGTGTTTAAAATTATAGATTGCAGCAGAGTGTTGGCCAAGGATTATTGTAGTAGGATAAAGTTTCCCTGTATTTGAAATTTACCC AAACTGTAGCAAATACATCTTTCCTTCTTTATGGAGGTCACACGTGTGCATAGTATGTGCCTGAATACAGGTAAACTTTGTGTTTTAAAA TTACATGGCCTTTTTTAGAGTCGACTGAAGGCTAGACTCTTCTTGCCCATGTTGCTGGATAGGCTTTCAAATCTCAGGCCTTGGAGAGTT AAATGACTTTCTGATATTTCTTACGGTGGAGCCACATAAGAAATACACACATTCCTAGTTTGAGCAATGGATGTGTATATTGGGGATCTT CACTTTTATGTATCTGGTAGTCATGATGGTGCCTATTCCCAACTGTAGGAAAGGAAAGCCCTCAAGGAGAAAATTCTCTTTCAAAAAGGC TCAGATTTCTAACAATTATGTCTAAATGTTTCTTCAATTTAGAACATGTACAAAAGCTACTTAATATTAGCAGAGTAGTTCTTGTGTTTT CATTTCAAATGAAATATTCCCAGTTCCAAAGTTTATTTCCTTGGCATTTTCAAGAAGGATGGTTATTTTTAGTTCTGGTTATTTGGTGTT GGAGGTCTGTGACACTTCCTTATACATTTAAAGCCCCCTTTGAATAGTTGTATCAATAGTTCAAAAGCCTGTAGATATCTTGCTTTTCTA TTCTGACAGCCCAGCTTCTGCAGACTCAGGCCAACCTTAGGTATGTCACATCAGTTCCCCATCTGTGTAAATTACCTGAACCTCTCTGTG GTATTCACTGAGAGTTGAGCTTCTACTAAGGGATTTCCTTGACCTGGGCTTTTAACACCAGATTTGTAGTGGAGTGTTTATTAGTAAAGC AAAGGAGTAAGTCAGAGATGCTAGCCCCTGCTCTCAGTTAAACAGAACTATCCTCCTTCCTGAATATTTAAACATAAAATTAATTTTAAA CTACTATAAAAATCATGTTCCATTGCTTGCCAAATCTTATACCATTATAATGCTGTATTTTTACATGTTAGTATACATTGTGTCCATAGG GATATAAATATGAGAATTTCAGCAACTGTCTTGCAGGGTTAAGATGTGCTATTTGTTGATTTTGCAAATTTTTCTCATGTGGTACAGTCC CTCCAAAGAAAATTTCCTTAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTTCCTGAAAACAGAAGTAGA CATATTTTATGCCCAATTTAGTACCTAATAATTGAGGCTTAAAACAAAATTTTCTTGGGCAAGTTGGGTGATTAAATATGAATTAAAACT TCTAGAGAAAGATTTCCAGATGCCCCTGTTTTCCATTTTGATTATGGTTTTAGTTTCATAGCAACTTGGGGGAAAAAAATCATTTACTTT ATGTCGTATTACAACAACAACTTTGACAGCTTAAATGTAGTGACCTCTCTGAAGGTAATATGCACATTATAATTTAGGATGAAAGCAGAT TTAAACTAAGACTTTCTGAGATGAAATAAAAGTAACCAATTCATAATAGTCATGTTTATTGCAGCAATATCTTGGGAACTTAAGTTTAGT GGCGTTTGAGGTGTTTCTGACTATCTTGCTTGTTCATTTCACCCTGCTCTGCAGAGACAGAATATGATTGAATGAACTGCCCATTATATT AATGACCAGTTCAAAGCAGTTTTGTGCTTTGGCTATAGATAAAATTTGGCAAAAATACTGTAGGCCTTTCTGGTCCATATTTATCCTTAA AGTATTTTTGCCAATCAATAAAAATGAAATATTTATCCAGAAATAGAAAAAGCTCTTTCCTATGACATTGACATAGAAGCCCAAATACTC CTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAACTGAATCAATGATTTTTTTTAGTTGTGCTCTTAATTGCATTATTTCACATATGTAA CACTGGGTTTGTTTTGGTTATATAGTATTATTTTACTTTATTCTAATTTCAACTCATGTCACTCTGTAGCTCATTAAGAATTTGTTCAAC >In-frame_ENST00000399262_ENST00000433211_TCGA-13-0891-01A_JMJD1C_chr10_65024411_-_CTNNA3_chr10_68979628_length(amino acids)=863AA_start in transcript=183_stop in transcript=2774 MEEAAAASAATAMAVETRAELVGKRFLCVAVGDEARSERWESGRGWRSWRAGVIRAVSHRDSRNPDLAVYVEFDDLEWDKREWVKVYEDF STFLVEYHLIWAKRNDPSQTQGSKSKQIQWPALTFKPLVERNIPSSVTAVEFLVDKQLDFLTEDSAFQPYQDLKSPNQRDEIAGARASLK ENSPLLHSICSACLEHSDVASLKASKDTVCEEIQNALNVISNASQGIQNMTTPPEPQAATLGSALDELENLIVLNPLTVTEEEIRPSLEK RLEAIISGAALLADSSCTRDLHRERIIAECNAIRQALQDLLSEYMNNAGKKERSNTLNIALDNMCKKTRDLRRQLRKAIIDHVSDSFLDT TVPLLVLIEAAKNGREKEIKEYAAIFHEHTSRLVEVANLACSMSTNEDGIKIVKIAANHLETLCPQIINAALALAARPKSQAVKNTMEMY KRTWENHIHVLTEAVDDITSIDDFLAVSESHILEDVNKCIIALRDQDADNLDRAAGAIRGRAARVAHIVTGEMDSYEPGAYTEGVMRNVN FLTSTVIPEFVTQVNVALEALSKSSLNVLDDNQFVDISKKIYDTIHDIRCSVMMIRTPEELEDVSDLEEEHEVRSHTSIQTEGKTDRAKM TQLPEAEKEKIAEQVADFKKVKSKLDAEIEIWDDTSNDIIVLAKNMCMIMMEMTDFTRGKGPLKHTTDVIYAAKMISESGSRMDVLARQI ANQCPDPSCKQDLLAYLEQIKFYSHQLKICSQVKAEIQNLGGELIMSALDSVTSLIQAAKNLMNAVVQTVKMSYIASTKIIRIQSPAGPR -------------------------------------------------------------- >In-frame_ENST00000399262_ENST00000373744_TCGA-13-0891-01A_JMJD1C_chr10_65024411_-_CTNNA3_chr10_68979628_length(transcript)=3086nt_BP=666nt CACAAGGCTGCGAATCTGGGAGTCCAAAGGAGTGTTTGCGGGGAGGGCCCGAGGTCGCTGTGTCCGGGGCAGAGCGGCCGGTTCGTCCCG AGTCTGCGCTCTTTCGGGTCCGCTGCTGTGTCCCGGTCCGCTCTCCTCAGCATGAGCGGCCGGTAGGAGTGAGGTTTCATCGGTTCCCTC GCACTGGAGGAGGCAGCGGCCGCTTCGGCAGCGACAGCTATGGCGGTAGAGACGCGGGCAGAGCTGGTGGGTAAGCGGTTCCTGTGTGTG GCGGTCGGCGACGAGGCACGTTCGGAGCGCTGGGAGAGCGGACGCGGCTGGCGAAGCTGGCGAGCGGGGGTCATCCGAGCCGTGTCACAC AGGGACAGCCGCAATCCGGACCTGGCGGTGTATGTGGAATTTGATGATCTTGAATGGGATAAACGAGAGTGGGTTAAAGTTTATGAAGAT TTTTCAACTTTCTTGGTGGAATACCACTTAATCTGGGCCAAAAGGAATGACCCTAGCCAGACTCAGGGATCAAAGAGCAAACAGATTCAG TGGCCTGCATTGACTTTCAAACCTCTGGTTGAAAGAAATATACCCAGTTCAGTCACTGCAGTAGAATTCCTTGTAGATAAGCAACTGGAT TTTTTAACTGAAGATAGTGCCTTTCAGCCCTACCAGGACTTAAAATCTCCAAATCAGAGAGATGAAATTGCAGGAGCCCGAGCTTCACTG AAGGAGAACTCTCCCCTCTTGCATTCAATTTGTTCAGCTTGTTTGGAGCATTCTGATGTTGCTTCCCTCAAAGCAAGCAAGGACACAGTT TGTGAAGAAATTCAGAATGCTCTCAATGTAATTTCAAATGCTTCACAAGGGATCCAGAATATGACAACCCCACCAGAACCTCAGGCAGCA ACCCTGGGAAGTGCCCTTGATGAGCTGGAGAATTTAATTGTCCTGAATCCACTCACAGTAACTGAGGAGGAAATACGACCATCACTAGAG AAACGCCTTGAAGCCATTATCAGTGGGGCTGCTCTGCTGGCGGATTCTTCATGTACGAGGGACTTACACCGAGAGCGGATTATCGCAGAA TGCAACGCCATTCGCCAGGCTCTTCAGGATCTGCTTTCAGAGTACATGAACAACGCTGGAAAAAAAGAAAGGAGTAATACCCTGAATATT GCTTTAGACAACATGTGTAAGAAGACAAGAGACCTTCGCAGACAGCTCCGCAAGGCTATTATAGATCATGTGTCAGACTCTTTCCTGGAT ACGACAGTCCCTCTTTTGGTTCTCATTGAAGCTGCTAAGAATGGCCGGGAAAAGGAAATAAAAGAATATGCTGCGATATTTCATGAACAC ACCAGCAGGCTTGTAGAGGTGGCAAATCTTGCTTGTTCCATGTCAACAAATGAAGATGGAATTAAAATTGTCAAAATTGCAGCCAATCAT TTGGAAACCTTGTGTCCACAGATTATTAATGCTGCACTTGCTTTGGCTGCAAGACCCAAAAGTCAAGCGGTCAAAAACACCATGGAAATG TACAAGCGTACATGGGAGAATCATATACATGTCCTCACTGAAGCCGTAGATGACATTACAAGCATTGATGACTTCCTTGCTGTATCTGAA AGCCATATCTTGGAAGATGTCAACAAGTGTATCATAGCCTTAAGAGACCAGGATGCTGATAATTTAGACCGTGCTGCGGGTGCTATCAGA GGCCGGGCAGCAAGAGTTGCTCACATCGTCACGGGTGAAATGGACAGTTACGAGCCAGGGGCTTACACGGAAGGTGTAATGAGAAATGTT AACTTCCTTACAAGTACTGTAATTCCTGAATTTGTAACACAAGTGAATGTTGCCTTGGAAGCCTTAAGCAAAAGCTCATTGAATGTGTTG GATGATAATCAATTTGTGGACATCTCAAAGAAGATCTATGATACAATTCATGATATCAGATGTTCAGTCATGATGATTCGGACCCCAGAG GAACTGGAGGATGTTTCTGACCTTGAAGAGGAACACGAGGTCCGCAGTCACACCAGCATTCAGACCGAAGGGAAAACTGATAGGGCTAAG ATGACTCAACTGCCTGAGGCAGAAAAAGAAAAGATTGCTGAGCAAGTTGCTGATTTCAAGAAAGTAAAGAGTAAGCTGGATGCTGAGATT GAGATATGGGATGATACAAGCAACGACATCATTGTTCTGGCCAAGAACATGTGTATGATCATGATGGAGATGACAGACTTCACTAGGGGC AAAGGACCACTAAAGCATACAACTGATGTGATCTATGCAGCGAAAATGATATCAGAATCAGGATCAAGGATGGATGTCCTTGCTCGGCAG ATTGCTAATCAGTGCCCAGATCCATCTTGTAAACAGGACTTGTTGGCCTACCTGGAACAGATTAAGTTCTACTCCCACCAACTGAAAATC TGCAGTCAAGTTAAAGCTGAGATCCAGAACCTGGGAGGAGAGCTCATCATGTCAGCTTTGGACAGTGTCACATCCCTGATCCAAGCAGCC AAAAATTTAATGAATGCTGTAGTGCAAACAGTGAAAATGTCTTACATTGCCTCAACCAAGATCATCCGAATCCAGAGTCCTGCTGGGCCC CGGCACCCAGTTGTGATGTGGAGAATGAAGGCTCCTGCAAAAAAACCCTTGATTAAAAGAGAGAAGCCAGAGGAAACGTGTGCAGCTGTC AGACGAGGCTCAGCAAAGAAAAAAATCCATCCATTGCAAGTCATGAGTGAATTTAGAGGAAGACAAATCTACTGAAACCACTATTCTACA TATAGTGCCTATATGACAAAATCCTGCCTAACCACACTGCTTTATTTTACACTTAAGAAGTTCTGTAATTTCACTAAGTTTTGGTGTTTA ACTCACAAATAACATAAAATATTGGGCGCTAAATCAACAAAAGCAATATATATTTGGGATCATATCACTGTCATTTCTGTATGGTCAGCA CCTAATAGTTAAGGAATATTTGCTTGTTGAATGAATGAAATTATCACGTGTCATTCAGCGTTTCCCATCATAGAGATTATCTACTATTCG >In-frame_ENST00000399262_ENST00000373744_TCGA-13-0891-01A_JMJD1C_chr10_65024411_-_CTNNA3_chr10_68979628_length(amino acids)=863AA_start in transcript=183_stop in transcript=2774 MEEAAAASAATAMAVETRAELVGKRFLCVAVGDEARSERWESGRGWRSWRAGVIRAVSHRDSRNPDLAVYVEFDDLEWDKREWVKVYEDF STFLVEYHLIWAKRNDPSQTQGSKSKQIQWPALTFKPLVERNIPSSVTAVEFLVDKQLDFLTEDSAFQPYQDLKSPNQRDEIAGARASLK ENSPLLHSICSACLEHSDVASLKASKDTVCEEIQNALNVISNASQGIQNMTTPPEPQAATLGSALDELENLIVLNPLTVTEEEIRPSLEK RLEAIISGAALLADSSCTRDLHRERIIAECNAIRQALQDLLSEYMNNAGKKERSNTLNIALDNMCKKTRDLRRQLRKAIIDHVSDSFLDT TVPLLVLIEAAKNGREKEIKEYAAIFHEHTSRLVEVANLACSMSTNEDGIKIVKIAANHLETLCPQIINAALALAARPKSQAVKNTMEMY KRTWENHIHVLTEAVDDITSIDDFLAVSESHILEDVNKCIIALRDQDADNLDRAAGAIRGRAARVAHIVTGEMDSYEPGAYTEGVMRNVN FLTSTVIPEFVTQVNVALEALSKSSLNVLDDNQFVDISKKIYDTIHDIRCSVMMIRTPEELEDVSDLEEEHEVRSHTSIQTEGKTDRAKM TQLPEAEKEKIAEQVADFKKVKSKLDAEIEIWDDTSNDIIVLAKNMCMIMMEMTDFTRGKGPLKHTTDVIYAAKMISESGSRMDVLARQI ANQCPDPSCKQDLLAYLEQIKFYSHQLKICSQVKAEIQNLGGELIMSALDSVTSLIQAAKNLMNAVVQTVKMSYIASTKIIRIQSPAGPR -------------------------------------------------------------- >In-frame_ENST00000399262_ENST00000545309_TCGA-13-0891-01A_JMJD1C_chr10_65024411_-_CTNNA3_chr10_68979628_length(transcript)=1218nt_BP=666nt CACAAGGCTGCGAATCTGGGAGTCCAAAGGAGTGTTTGCGGGGAGGGCCCGAGGTCGCTGTGTCCGGGGCAGAGCGGCCGGTTCGTCCCG AGTCTGCGCTCTTTCGGGTCCGCTGCTGTGTCCCGGTCCGCTCTCCTCAGCATGAGCGGCCGGTAGGAGTGAGGTTTCATCGGTTCCCTC GCACTGGAGGAGGCAGCGGCCGCTTCGGCAGCGACAGCTATGGCGGTAGAGACGCGGGCAGAGCTGGTGGGTAAGCGGTTCCTGTGTGTG GCGGTCGGCGACGAGGCACGTTCGGAGCGCTGGGAGAGCGGACGCGGCTGGCGAAGCTGGCGAGCGGGGGTCATCCGAGCCGTGTCACAC AGGGACAGCCGCAATCCGGACCTGGCGGTGTATGTGGAATTTGATGATCTTGAATGGGATAAACGAGAGTGGGTTAAAGTTTATGAAGAT TTTTCAACTTTCTTGGTGGAATACCACTTAATCTGGGCCAAAAGGAATGACCCTAGCCAGACTCAGGGATCAAAGAGCAAACAGATTCAG TGGCCTGCATTGACTTTCAAACCTCTGGTTGAAAGAAATATACCCAGTTCAGTCACTGCAGTAGAATTCCTTGTAGATAAGCAACTGGAT TTTTTAACTGAAGATAGTGCCTTTCAGCCCTACCAGGACTTAAAATCTCCAAATCAGAGAGATGAAATTGCAGGAGCCCGAGCTTCACTG AAGGAGAACTCTCCCCTCTTGCATTCAATTTGTTCAGCTTGTTTGGAGCATTCTGATGTTGCTTCCCTCAAAGCAAGCAAGGACACAGTT TGTGAAGAAATTCAGAATGCTCTCAATGTAATTTCAAATGCTTCACAAGGGATCCAGAATATGACAACCCCACCAGAACCTCAGGCAGCA ACCCTGGGAAGTGCCCTTGATGAGCTGGAGAATTTAATTGTCCTGAATCCACTCACAGTAACTGAGGAGGAAATACGACCATCACTAGAG AAACGCCTTGAAGCCATTATCAGTGGGGCTGCTCTGCTGGCGGATTCTTCATGTACGAGGGACTTACACCGAGAGCGGATTATCGCAGAA TGCAACGCCATTCGCCAGGCTCTTCAGGATCTGCTTTCAGAGTACATGAACAACCTCTGTAATCAAAAGTCTGACCTGGGCCTCACTGGA >In-frame_ENST00000399262_ENST00000545309_TCGA-13-0891-01A_JMJD1C_chr10_65024411_-_CTNNA3_chr10_68979628_length(amino acids)=344AA_start in transcript=183_stop in transcript=1217 MEEAAAASAATAMAVETRAELVGKRFLCVAVGDEARSERWESGRGWRSWRAGVIRAVSHRDSRNPDLAVYVEFDDLEWDKREWVKVYEDF STFLVEYHLIWAKRNDPSQTQGSKSKQIQWPALTFKPLVERNIPSSVTAVEFLVDKQLDFLTEDSAFQPYQDLKSPNQRDEIAGARASLK ENSPLLHSICSACLEHSDVASLKASKDTVCEEIQNALNVISNASQGIQNMTTPPEPQAATLGSALDELENLIVLNPLTVTEEEIRPSLEK -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for JMJD1C-CTNNA3 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for JMJD1C-CTNNA3 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for JMJD1C-CTNNA3 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | JMJD1C | C0004352 | Autistic Disorder | 1 | CTD_human |
Hgene | JMJD1C | C0010606 | Adenoid Cystic Carcinoma | 1 | CTD_human |
Hgene | JMJD1C | C0012236 | DiGeorge Syndrome | 1 | ORPHANET |
Hgene | JMJD1C | C0087031 | Juvenile-Onset Still Disease | 1 | CTD_human |
Hgene | JMJD1C | C0220704 | Shprintzen syndrome | 1 | ORPHANET |
Hgene | JMJD1C | C0431406 | Asymmetric crying face association | 1 | ORPHANET |
Hgene | JMJD1C | C0795907 | CONOTRUNCAL ANOMALY FACE SYNDROME | 1 | ORPHANET |
Hgene | JMJD1C | C1333813 | Central Nervous System Germinoma | 1 | ORPHANET |
Hgene | JMJD1C | C2936346 | 22q11 Deletion Syndrome | 1 | ORPHANET |
Hgene | JMJD1C | C3266101 | 22q11 partial monosomy syndrome | 1 | ORPHANET |
Hgene | JMJD1C | C3495559 | Juvenile arthritis | 1 | CTD_human |
Hgene | JMJD1C | C3714758 | Juvenile psoriatic arthritis | 1 | CTD_human |
Hgene | JMJD1C | C4552091 | Polyarthritis, Juvenile, Rheumatoid Factor Negative | 1 | CTD_human |
Hgene | JMJD1C | C4704862 | Polyarthritis, Juvenile, Rheumatoid Factor Positive | 1 | CTD_human |
Tgene | CTNNA3 | C0004096 | Asthma | 1 | CTD_human |
Tgene | CTNNA3 | C0013146 | Drug abuse | 1 | CTD_human |
Tgene | CTNNA3 | C0013170 | Drug habituation | 1 | CTD_human |
Tgene | CTNNA3 | C0013222 | Drug Use Disorders | 1 | CTD_human |
Tgene | CTNNA3 | C0029231 | Organic Mental Disorders, Substance-Induced | 1 | CTD_human |
Tgene | CTNNA3 | C0038580 | Substance Dependence | 1 | CTD_human |
Tgene | CTNNA3 | C0038586 | Substance Use Disorders | 1 | CTD_human |
Tgene | CTNNA3 | C0236969 | Substance-Related Disorders | 1 | CTD_human |
Tgene | CTNNA3 | C0740858 | Substance abuse problem | 1 | CTD_human |
Tgene | CTNNA3 | C1510472 | Drug Dependence | 1 | CTD_human |
Tgene | CTNNA3 | C1832931 | ARRHYTHMOGENIC RIGHT VENTRICULAR DYSPLASIA, FAMILIAL, 2 | 1 | ORPHANET |
Tgene | CTNNA3 | C3810138 | ARRHYTHMOGENIC RIGHT VENTRICULAR DYSPLASIA, FAMILIAL, 13 | 1 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
Tgene | CTNNA3 | C4316881 | Prescription Drug Abuse | 1 | CTD_human |