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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:LDHA-WIPI2 (FusionGDB2 ID:44088) |
Fusion Gene Summary for LDHA-WIPI2 |
Fusion gene summary |
Fusion gene information | Fusion gene name: LDHA-WIPI2 | Fusion gene ID: 44088 | Hgene | Tgene | Gene symbol | LDHA | WIPI2 | Gene ID | 3939 | 26100 |
Gene name | lactate dehydrogenase A | WD repeat domain, phosphoinositide interacting 2 | |
Synonyms | GSD11|HEL-S-133P|LDHM|PIG19 | ATG18B|Atg21|CGI-50|IDDSSA|WIPI-2 | |
Cytomap | 11p15.1 | 7p22.1 | |
Type of gene | protein-coding | protein-coding | |
Description | L-lactate dehydrogenase A chainLDH muscle subunitLDH-ALDH-Mcell proliferation-inducing gene 19 proteinepididymis secretory sperm binding protein Li 133Plactate dehydrogenase Mproliferation-inducing gene 19renal carcinoma antigen NY-REN-59 | WD repeat domain phosphoinositide-interacting protein 2WD40 repeat protein interacting with phosphoinositides 2WIPI49-like protein 2 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | P00338 | . | |
Ensembl transtripts involved in fusion gene | ENST00000422447, ENST00000430553, ENST00000396222, ENST00000227157, ENST00000540430, ENST00000379412, ENST00000542179, | ENST00000288828, ENST00000401525, ENST00000404704, ENST00000485854, ENST00000382384, ENST00000484262, | |
Fusion gene scores | * DoF score | 8 X 11 X 2=176 | 7 X 7 X 3=147 |
# samples | 12 | 7 | |
** MAII score | log2(12/176*10)=-0.552541023028779 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(7/147*10)=-1.0703893278914 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: LDHA [Title/Abstract] AND WIPI2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | LDHA(18427106)-WIPI2(5262235), # samples:4 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | WIPI2 | GO:0009267 | cellular response to starvation | 28561066 |
Fusion gene breakpoints across LDHA (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across WIPI2 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS5.0 | N/A | BG775162 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
ChiTaRS5.0 | N/A | BM044090 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
ChiTaRS5.0 | N/A | BM049309 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
ChiTaRS5.0 | N/A | BQ928549 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
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Fusion Gene ORF analysis for LDHA-WIPI2 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000422447 | ENST00000288828 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
In-frame | ENST00000422447 | ENST00000401525 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
In-frame | ENST00000422447 | ENST00000404704 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
5CDS-intron | ENST00000422447 | ENST00000485854 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
5CDS-intron | ENST00000422447 | ENST00000382384 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
5CDS-intron | ENST00000422447 | ENST00000484262 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
In-frame | ENST00000430553 | ENST00000288828 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
In-frame | ENST00000430553 | ENST00000401525 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
In-frame | ENST00000430553 | ENST00000404704 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
5CDS-intron | ENST00000430553 | ENST00000485854 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
5CDS-intron | ENST00000430553 | ENST00000382384 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
5CDS-intron | ENST00000430553 | ENST00000484262 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
intron-3CDS | ENST00000396222 | ENST00000288828 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
intron-3CDS | ENST00000396222 | ENST00000401525 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
intron-3CDS | ENST00000396222 | ENST00000404704 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
intron-intron | ENST00000396222 | ENST00000485854 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
intron-intron | ENST00000396222 | ENST00000382384 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
intron-intron | ENST00000396222 | ENST00000484262 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
intron-3CDS | ENST00000227157 | ENST00000288828 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
intron-3CDS | ENST00000227157 | ENST00000401525 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
intron-3CDS | ENST00000227157 | ENST00000404704 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
intron-intron | ENST00000227157 | ENST00000485854 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
intron-intron | ENST00000227157 | ENST00000382384 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
intron-intron | ENST00000227157 | ENST00000484262 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
In-frame | ENST00000540430 | ENST00000288828 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
In-frame | ENST00000540430 | ENST00000401525 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
In-frame | ENST00000540430 | ENST00000404704 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
5CDS-intron | ENST00000540430 | ENST00000485854 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
5CDS-intron | ENST00000540430 | ENST00000382384 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
5CDS-intron | ENST00000540430 | ENST00000484262 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
In-frame | ENST00000379412 | ENST00000288828 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
In-frame | ENST00000379412 | ENST00000401525 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
In-frame | ENST00000379412 | ENST00000404704 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
5CDS-intron | ENST00000379412 | ENST00000485854 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
5CDS-intron | ENST00000379412 | ENST00000382384 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
5CDS-intron | ENST00000379412 | ENST00000484262 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
In-frame | ENST00000542179 | ENST00000288828 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
In-frame | ENST00000542179 | ENST00000401525 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
In-frame | ENST00000542179 | ENST00000404704 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
5CDS-intron | ENST00000542179 | ENST00000485854 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
5CDS-intron | ENST00000542179 | ENST00000382384 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
5CDS-intron | ENST00000542179 | ENST00000484262 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000422447 | LDHA | chr11 | 18427106 | + | ENST00000288828 | WIPI2 | chr7 | 5262235 | + | 4571 | 996 | 138 | 1691 | 517 |
ENST00000422447 | LDHA | chr11 | 18427106 | + | ENST00000401525 | WIPI2 | chr7 | 5262235 | + | 2269 | 996 | 138 | 1691 | 517 |
ENST00000422447 | LDHA | chr11 | 18427106 | + | ENST00000404704 | WIPI2 | chr7 | 5262235 | + | 1816 | 996 | 138 | 1658 | 506 |
ENST00000430553 | LDHA | chr11 | 18427106 | + | ENST00000288828 | WIPI2 | chr7 | 5262235 | + | 4223 | 648 | 99 | 1343 | 414 |
ENST00000430553 | LDHA | chr11 | 18427106 | + | ENST00000401525 | WIPI2 | chr7 | 5262235 | + | 1921 | 648 | 99 | 1343 | 414 |
ENST00000430553 | LDHA | chr11 | 18427106 | + | ENST00000404704 | WIPI2 | chr7 | 5262235 | + | 1468 | 648 | 99 | 1310 | 403 |
ENST00000540430 | LDHA | chr11 | 18427106 | + | ENST00000288828 | WIPI2 | chr7 | 5262235 | + | 4667 | 1092 | 282 | 1787 | 501 |
ENST00000540430 | LDHA | chr11 | 18427106 | + | ENST00000401525 | WIPI2 | chr7 | 5262235 | + | 2365 | 1092 | 282 | 1787 | 501 |
ENST00000540430 | LDHA | chr11 | 18427106 | + | ENST00000404704 | WIPI2 | chr7 | 5262235 | + | 1912 | 1092 | 282 | 1754 | 490 |
ENST00000379412 | LDHA | chr11 | 18427106 | + | ENST00000288828 | WIPI2 | chr7 | 5262235 | + | 4655 | 1080 | 270 | 1775 | 501 |
ENST00000379412 | LDHA | chr11 | 18427106 | + | ENST00000401525 | WIPI2 | chr7 | 5262235 | + | 2353 | 1080 | 270 | 1775 | 501 |
ENST00000379412 | LDHA | chr11 | 18427106 | + | ENST00000404704 | WIPI2 | chr7 | 5262235 | + | 1900 | 1080 | 270 | 1742 | 490 |
ENST00000542179 | LDHA | chr11 | 18427106 | + | ENST00000288828 | WIPI2 | chr7 | 5262235 | + | 4587 | 1012 | 289 | 1707 | 472 |
ENST00000542179 | LDHA | chr11 | 18427106 | + | ENST00000401525 | WIPI2 | chr7 | 5262235 | + | 2285 | 1012 | 289 | 1707 | 472 |
ENST00000542179 | LDHA | chr11 | 18427106 | + | ENST00000404704 | WIPI2 | chr7 | 5262235 | + | 1832 | 1012 | 289 | 1674 | 461 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000422447 | ENST00000288828 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + | 0.002107667 | 0.9978923 |
ENST00000422447 | ENST00000401525 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + | 0.002231084 | 0.9977689 |
ENST00000422447 | ENST00000404704 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + | 0.002596722 | 0.9974032 |
ENST00000430553 | ENST00000288828 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + | 0.002598734 | 0.99740124 |
ENST00000430553 | ENST00000401525 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + | 0.002409172 | 0.9975909 |
ENST00000430553 | ENST00000404704 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + | 0.002709419 | 0.99729055 |
ENST00000540430 | ENST00000288828 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + | 0.001243942 | 0.99875605 |
ENST00000540430 | ENST00000401525 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + | 0.000969505 | 0.9990305 |
ENST00000540430 | ENST00000404704 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + | 0.00120462 | 0.9987954 |
ENST00000379412 | ENST00000288828 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + | 0.00126629 | 0.9987337 |
ENST00000379412 | ENST00000401525 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + | 0.001011973 | 0.998988 |
ENST00000379412 | ENST00000404704 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + | 0.001260095 | 0.9987399 |
ENST00000542179 | ENST00000288828 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + | 0.001537033 | 0.99846303 |
ENST00000542179 | ENST00000401525 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + | 0.001044564 | 0.99895537 |
ENST00000542179 | ENST00000404704 | LDHA | chr11 | 18427106 | + | WIPI2 | chr7 | 5262235 | + | 0.001103604 | 0.99889636 |
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Fusion Genomic Features for LDHA-WIPI2 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for LDHA-WIPI2 |
Go to FGviewer for the breakpoints of chr11:18427106-chr7:5262235 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
LDHA | . |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000288828 | 6 | 13 | 241_244 | 223.0 | 455.0 | Motif | FRRG motif | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000382384 | 5 | 12 | 241_244 | 205.0 | 426.0 | Motif | FRRG motif | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000401525 | 5 | 12 | 241_244 | 205.0 | 437.0 | Motif | FRRG motif | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000404704 | 6 | 13 | 241_244 | 223.0 | 444.0 | Motif | FRRG motif | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000484262 | 3 | 10 | 241_244 | 164.0 | 385.0 | Motif | FRRG motif | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000288828 | 6 | 13 | 238_277 | 223.0 | 455.0 | Repeat | WD 6 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000288828 | 6 | 13 | 320_359 | 223.0 | 455.0 | Repeat | WD 7 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000382384 | 5 | 12 | 238_277 | 205.0 | 426.0 | Repeat | WD 6 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000382384 | 5 | 12 | 320_359 | 205.0 | 426.0 | Repeat | WD 7 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000401525 | 5 | 12 | 238_277 | 205.0 | 437.0 | Repeat | WD 6 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000401525 | 5 | 12 | 320_359 | 205.0 | 437.0 | Repeat | WD 7 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000404704 | 6 | 13 | 238_277 | 223.0 | 444.0 | Repeat | WD 6 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000404704 | 6 | 13 | 320_359 | 223.0 | 444.0 | Repeat | WD 7 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000484262 | 3 | 10 | 193_232 | 164.0 | 385.0 | Repeat | WD 5 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000484262 | 3 | 10 | 238_277 | 164.0 | 385.0 | Repeat | WD 6 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000484262 | 3 | 10 | 320_359 | 164.0 | 385.0 | Repeat | WD 7 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | LDHA | chr11:18427106 | chr7:5262235 | ENST00000227157 | + | 1 | 7 | 29_57 | 0 | 242.0 | Nucleotide binding | NAD |
Hgene | LDHA | chr11:18427106 | chr7:5262235 | ENST00000379412 | + | 1 | 8 | 29_57 | 0 | 333.0 | Nucleotide binding | NAD |
Hgene | LDHA | chr11:18427106 | chr7:5262235 | ENST00000396222 | + | 1 | 7 | 29_57 | 0 | 275.0 | Nucleotide binding | NAD |
Hgene | LDHA | chr11:18427106 | chr7:5262235 | ENST00000422447 | + | 1 | 8 | 29_57 | 0 | 333.0 | Nucleotide binding | NAD |
Hgene | LDHA | chr11:18427106 | chr7:5262235 | ENST00000430553 | + | 1 | 7 | 29_57 | 0 | 275.0 | Nucleotide binding | NAD |
Hgene | LDHA | chr11:18427106 | chr7:5262235 | ENST00000540430 | + | 1 | 8 | 29_57 | 0 | 362.0 | Nucleotide binding | NAD |
Hgene | LDHA | chr11:18427106 | chr7:5262235 | ENST00000542179 | + | 1 | 7 | 29_57 | 0 | 333.0 | Nucleotide binding | NAD |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000288828 | 6 | 13 | 110_142 | 223.0 | 455.0 | Repeat | WD 3 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000288828 | 6 | 13 | 149_189 | 223.0 | 455.0 | Repeat | WD 4 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000288828 | 6 | 13 | 15_60 | 223.0 | 455.0 | Repeat | WD 1 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000288828 | 6 | 13 | 193_232 | 223.0 | 455.0 | Repeat | WD 5 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000288828 | 6 | 13 | 67_104 | 223.0 | 455.0 | Repeat | WD 2 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000382384 | 5 | 12 | 110_142 | 205.0 | 426.0 | Repeat | WD 3 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000382384 | 5 | 12 | 149_189 | 205.0 | 426.0 | Repeat | WD 4 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000382384 | 5 | 12 | 15_60 | 205.0 | 426.0 | Repeat | WD 1 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000382384 | 5 | 12 | 193_232 | 205.0 | 426.0 | Repeat | WD 5 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000382384 | 5 | 12 | 67_104 | 205.0 | 426.0 | Repeat | WD 2 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000401525 | 5 | 12 | 110_142 | 205.0 | 437.0 | Repeat | WD 3 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000401525 | 5 | 12 | 149_189 | 205.0 | 437.0 | Repeat | WD 4 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000401525 | 5 | 12 | 15_60 | 205.0 | 437.0 | Repeat | WD 1 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000401525 | 5 | 12 | 193_232 | 205.0 | 437.0 | Repeat | WD 5 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000401525 | 5 | 12 | 67_104 | 205.0 | 437.0 | Repeat | WD 2 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000404704 | 6 | 13 | 110_142 | 223.0 | 444.0 | Repeat | WD 3 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000404704 | 6 | 13 | 149_189 | 223.0 | 444.0 | Repeat | WD 4 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000404704 | 6 | 13 | 15_60 | 223.0 | 444.0 | Repeat | WD 1 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000404704 | 6 | 13 | 193_232 | 223.0 | 444.0 | Repeat | WD 5 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000404704 | 6 | 13 | 67_104 | 223.0 | 444.0 | Repeat | WD 2 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000484262 | 3 | 10 | 110_142 | 164.0 | 385.0 | Repeat | WD 3 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000484262 | 3 | 10 | 149_189 | 164.0 | 385.0 | Repeat | WD 4 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000484262 | 3 | 10 | 15_60 | 164.0 | 385.0 | Repeat | WD 1 | |
Tgene | WIPI2 | chr11:18427106 | chr7:5262235 | ENST00000484262 | 3 | 10 | 67_104 | 164.0 | 385.0 | Repeat | WD 2 |
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Fusion Gene Sequence for LDHA-WIPI2 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000422447_ENST00000288828_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(transcript)=4571nt_BP=996nt AGTCTGCCGGTCGGTTGTCTGGCTGCGCGCGCCACCCGGGCCTCTCCAGTGCCCCGCCTGGCTCGGCATCCACCCCCAGCCCGACTCACA CGTGGGTTCCCGCACGTCCGCCGGCCCCCCCCGCTGACGTCAGCATAGCTGTTCCACTTAAGGCCCCTCCCGCGCCCAGCTCAGAGTGCT GCAGCCGCTGCCGCCGATTCCGGATCTCATTGCCACGCGCCCCCGACGACCGCCCGACGTGCATTCCCGATTCCTTTTGGTTCCAAGTCC AATATGGCAACTCTAAAGGATCAGCTGATTTATAATCTTCTAAAGGAAGAACAGACCCCCCAGAATAAGATTACAGTTGTTGGGGTTGGT GCTGTTGGCATGGCCTGTGCCATCAGTATCTTAATGAAGGACTTGGCAGATGAACTTGCTCTTGTTGATGTCATCGAAGACAAATTGAAG GGAGAGATGATGGATCTCCAACATGGCAGCCTTTTCCTTAGAACACCAAAGATTGTCTCTGGCAAAGACTATAATGTAACTGCAAACTCC AAGCTGGTCATTATCACGGCTGGGGCACGTCAGCAAGAGGGAGAAAGCCGTCTTAATTTGGTCCAGCGTAACGTGAACATCTTTAAATTC ATCATTCCTAATGTTGTAAAATACAGCCCGAACTGCAAGTTGCTTATTGTTTCAAATCCAGTGGATATCTTGACCTACGTGGCTTGGAAG ATAAGTGGTTTTCCCAAAAACCGTGTTATTGGAAGCGGTTGCAATCTGGATTCAGCCCGATTCCGTTACCTAATGGGGGAAAGGCTGGGA GTTCACCCATTAAGCTGTCATGGGTGGGTCCTTGGGGAACATGGAGATTCCAGTGTGCCTGTATGGAGTGGAATGAATGTTGCTGGTGTC TCTCTGAAGACTCTGCACCCAGATTTAGGGACTGATAAAGATAAGGAACAGTGGAAAGAGGTTCACAAGCAGGTGGTTGAGAGCACCATG ATTAAGGGGACCGTGATTAGGGTATTTTCCATTCCAGAAGGACAAAAACTCTTTGAGTTTCGGAGAGGAGTAAAGAGGTGCGTGAGCATC TGCTCCCTGGCCTTCAGCATGGACGGCATGTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGCACATCTTCAAACTCGAGACTGTGAAA GAAAAACCCCCAGAGGAGCCCACCACCTGGACCGGGTACTTCGGGAAAGTGCTCATGGCCTCCACCAGCTACCTGCCTTCCCAAGTGACA GAAATGTTCAACCAGGGCAGAGCCTTCGCCACGGTCCGCCTGCCATTCTGCGGCCACAAAAACATCTGCTCGCTAGCCACAATTCAGAAG ATCCCGCGGTTGTTGGTGGGTGCCGCCGACGGGTACCTGTACATGTACAACCTGGACCCCCAGGAGGGCGGCGAGTGTGCCCTGATGAAG CAGCACCGGCTGGACGGCAGTCTGGAAACGACCAATGAGATCTTGGACTCTGCCTCTCACGACTGCCCCTTAGTCACTCAGACATACGGC GCAGCTGCAGGAAAAGGTACTTACGTGCCTTCATCCCCAACGAGACTTGCCTACACAGACGACCTGGGTGCTGTGGGTGGCGCCTGCCTG GAGGACGAGGCCAGCGCCCTGCGCCTGGATGAGGACAGCGAGCACCCGCCCATGATTCTTCGGACTGACTGAACTTGACCTGTGACCTCT GACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCAGA GACTTTATTAAAAAAAAAAAAAGATTGTAGTGGTAGTCTAACTCCATAACGCTGAGGAAATACATCATTTTCACTTCAGTGGCTTTTAAA TCCTGCTTATGAATTTTAGCTTTTTGTTTGTTTGTTTTCTCTTTTTGCCAAAATTAACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTT TGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTTCCAGCCACCTGCCGTTGGGTTTTTTCATATCTGTACATAAT GCCGAGTGCGTAAGGAAACCGTGGCGTCGCGCACAGTGGGTCTGCTTGTCAAGGCCAGTTCTGCAGTGACAGGCCCAGGGGCTGCCCACC AGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGACCATTTTCCCTCCGTTTTATTTTGTTAAT TAAATTCTTTCCAAATTGGATCGCTCTGGGATTTCTTCCATGGTGGACTTTTGTTTCTGATCTTGTTTTCCCTGTGGATATTGGAGGACA GCGAGGTTCTTTCTGATACTAAAAACCTTTCTTTCAGGCAGCAAATGAACTTGAAAGGTTGCCTGGACTCGCTGGAGCAAAGGAAAGCGA TTTTGTTTGTATAATTAAATGATCTGTTCTTCTACTTCACTCTTCCTGTTGAAAAACTGTGTGATTTTTTTTTTTTTTTAAGTAAAGTTT GTAGCTCCTCCCATGCCCAGGAAAGCACAGAACTCAAGTGTGGTGGCCGTCTGAGCTGTCCTTTCGCTGGCCCCGCTGTCCGCAGGGGCT TCCTACCTGTGTGAGAGGTCGTAGCGGGAGACAGCAACAGAGAGTAGGCGGCTGGGCCACGTCCTTCACAGGGCGTCATGTGCCTTTCTA TTTTCATCTTAGAAAATTTCCTCAGCAAACCGATGAGAGATTGTGGTTGCAAGCTTCAGTATTTGCCTCGCTTCCCTTCCCTTTTCATAT TTACAGAATTAAAACAACCTCAAGTACCTCAGACTCTGCATTCCAAACCAAGGCACCCAGCAGCCAAAGTGTCGAGGGCATTTAAGTGGC ATTAATGGCAGGAGAGATGGTTTTAGAATCTATGGAGTGGTGGAAGTTACGGATAGAAGGGAAAAGGCAAAAACTATTTACCCTGCCTTT GCAGGCTGGGGTTTTTGAACCGAGGAAGGCTGGGACGCCTGTTTCCAGATGGTTGTCATGGTCACGCTGGGCGAAGAGCTGGAGGGGAGT TGTCCCCTCAGCTGAGCGGCTGCGGTGAAATGCCCCAGTGTTCCTGGGTTGGCTTTACGGCAAACTAAATGCAGGGGACGCTGGAGTCCG ACTCACCTACACCGGCTTCCTCCCAGCCGCTGGTGTGCGGCACACACAACATCTGCATTAGGCAGAGGTGCAAGTGGGCTGATTGAACTT TTCCTTCAAAACCTGCTTGTCTGTCCTGGACCTTTGATGAAATGGGATCCCGGTCACGCAGGCTGAGACAGTGGGGACCGCCGAGGCCAG AGTGGGCTATGCTTGAGCAGGGATGAGAAGGGCCGCGGCAGCACGCAGCCTTGACCCACGCCTGCGTCTTGTGGTGCAAGGCCAGAGGGC TCTCTCTAGAACCTGACCGTGCACTCCATCTCCTGGGAGCCACTTTTGGCAAGAGTGAGTGTGGGGGGAAAAAGTGTGCACAAGAGATAC GGAACCCTGAGCTAGGGTTTCCTGTCACCAAAGAGTGAGCTGCATTTCCAGTTCTGCGTTAAAGTATCGTTTGTTCTGGTGCCTGCCTGT GGTGGTGATTTGGAGACTCAAATTTCCTTTGCCAGGTCTCTTTTGTCTTTCTTTGGGATTGGTAGTATAGAAGATGCTGGGAATTGTCTT CCTCGCTCAGCCTCGGCTTCCCGCACTGTAAGATGAGGCAGTTGCAGAGGAGGCCTCGGACGTCCTGTGACCCTCGGCCCACACTCCCCC TTGGGTGGCCCTGGCAGGGCTGGCTAGGTGCGTTCCCTGCAGACCACGGGAAGCCCTGTGCTTGCCTGGGTCAGGGCTAAGCTGTGCGCC CTAGAGGAGGGAGGAGGACTGCAGATTCTTGGTCGAGAAGAATGAAGAGGATTTCTGTGTTTGCTGAGCAGCCATTGTGGAGGGTTACCC GCCTCCACTTTCCCGTTGCCCATTTCACTGCCACCAGCTCCTCTTCCTCTGCTCGAACCTATGAGTCCCAGCCTCACTGGCGGCCTCAGA CATGCTCAGGAGTGACGGGGACAGAGGGAGGCCGCTGAGTTGCCCGTTAGAACTCTTACTGCTGCGCCAGTGACCCAGGTGGAGAGGGAC CCTGAACCAAACAGAACGTGTGCTAATTTTCCGAACTCCAAACTGTACACTCATATTCATTTTTAAATTGTATTTTTCCAAACTTCAAAA AGGACGATGAGCGTGGGGGATAGGAAACAAAACCTGTAAACGTTGTGAATGGGCTCAGTGGACTCTGGGACCAAACCTTCTGTAATCTCT AAAACAATGGGACCAAGAGCTGGATGGAACCTGGAGTCAAAAAGAACTGCTTCAGTCCCCGCTGTACCGCCTGCCTAGCTGTGGGAGCAG GCAGGGCGCCTGGGAGCCTGCGTTTTCTGGACCGTTCCATGGGACTCATCCCTACCTCACAGGGCTGTTGTGAGGTGTTGTGTGACTGCG >In-frame_ENST00000422447_ENST00000288828_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(amino acids)=517AA_start in transcript=138_stop in transcript=1691 MFHLRPLPRPAQSAAAAAADSGSHCHAPPTTARRAFPIPFGSKSNMATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLA DELALVDVIEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLLI VSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKE QWKEVHKQVVESTMIKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSMDGMFLSASSNTETVHIFKLETVKEKPPEEPTTWTGYFGK VLMASTSYLPSQVTEMFNQGRAFATVRLPFCGHKNICSLATIQKIPRLLVGAADGYLYMYNLDPQEGGECALMKQHRLDGSLETTNEILD -------------------------------------------------------------- >In-frame_ENST00000422447_ENST00000401525_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(transcript)=2269nt_BP=996nt AGTCTGCCGGTCGGTTGTCTGGCTGCGCGCGCCACCCGGGCCTCTCCAGTGCCCCGCCTGGCTCGGCATCCACCCCCAGCCCGACTCACA CGTGGGTTCCCGCACGTCCGCCGGCCCCCCCCGCTGACGTCAGCATAGCTGTTCCACTTAAGGCCCCTCCCGCGCCCAGCTCAGAGTGCT GCAGCCGCTGCCGCCGATTCCGGATCTCATTGCCACGCGCCCCCGACGACCGCCCGACGTGCATTCCCGATTCCTTTTGGTTCCAAGTCC AATATGGCAACTCTAAAGGATCAGCTGATTTATAATCTTCTAAAGGAAGAACAGACCCCCCAGAATAAGATTACAGTTGTTGGGGTTGGT GCTGTTGGCATGGCCTGTGCCATCAGTATCTTAATGAAGGACTTGGCAGATGAACTTGCTCTTGTTGATGTCATCGAAGACAAATTGAAG GGAGAGATGATGGATCTCCAACATGGCAGCCTTTTCCTTAGAACACCAAAGATTGTCTCTGGCAAAGACTATAATGTAACTGCAAACTCC AAGCTGGTCATTATCACGGCTGGGGCACGTCAGCAAGAGGGAGAAAGCCGTCTTAATTTGGTCCAGCGTAACGTGAACATCTTTAAATTC ATCATTCCTAATGTTGTAAAATACAGCCCGAACTGCAAGTTGCTTATTGTTTCAAATCCAGTGGATATCTTGACCTACGTGGCTTGGAAG ATAAGTGGTTTTCCCAAAAACCGTGTTATTGGAAGCGGTTGCAATCTGGATTCAGCCCGATTCCGTTACCTAATGGGGGAAAGGCTGGGA GTTCACCCATTAAGCTGTCATGGGTGGGTCCTTGGGGAACATGGAGATTCCAGTGTGCCTGTATGGAGTGGAATGAATGTTGCTGGTGTC TCTCTGAAGACTCTGCACCCAGATTTAGGGACTGATAAAGATAAGGAACAGTGGAAAGAGGTTCACAAGCAGGTGGTTGAGAGCACCATG ATTAAGGGGACCGTGATTAGGGTATTTTCCATTCCAGAAGGACAAAAACTCTTTGAGTTTCGGAGAGGAGTAAAGAGGTGCGTGAGCATC TGCTCCCTGGCCTTCAGCATGGACGGCATGTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGCACATCTTCAAACTCGAGACTGTGAAA GAAAAACCCCCAGAGGAGCCCACCACCTGGACCGGGTACTTCGGGAAAGTGCTCATGGCCTCCACCAGCTACCTGCCTTCCCAAGTGACA GAAATGTTCAACCAGGGCAGAGCCTTCGCCACGGTCCGCCTGCCATTCTGCGGCCACAAAAACATCTGCTCGCTAGCCACAATTCAGAAG ATCCCGCGGTTGTTGGTGGGTGCCGCCGACGGGTACCTGTACATGTACAACCTGGACCCCCAGGAGGGCGGCGAGTGTGCCCTGATGAAG CAGCACCGGCTGGACGGCAGTCTGGAAACGACCAATGAGATCTTGGACTCTGCCTCTCACGACTGCCCCTTAGTCACTCAGACATACGGC GCAGCTGCAGGAAAAGGTACTTACGTGCCTTCATCCCCAACGAGACTTGCCTACACAGACGACCTGGGTGCTGTGGGTGGCGCCTGCCTG GAGGACGAGGCCAGCGCCCTGCGCCTGGATGAGGACAGCGAGCACCCGCCCATGATTCTTCGGACTGACTGAACTTGACCTGTGACCTCT GACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCAGA GACTTTATTAAAAAAAAAAAAAGATTGTAGTGGTAGTCTAACTCCATAACGCTGAGGAAATACATCATTTTCACTTCAGTGGCTTTTAAA TCCTGCTTATGAATTTTAGCTTTTTGTTTGTTTGTTTTCTCTTTTTGCCAAAATTAACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTT TGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTTCCAGCCACCTGCCGTTGGGTTTTTTCATATCTGTACATAAT GCCGAGTGCGTAAGGAAACCGTGGCGTCGCGCACAGTGGGTCTGCTTGTCAAGGCCAGTTCTGCAGTGACAGGCCCAGGGGCTGCCCACC AGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGACCATTTTCCCTCCGTTTTATTTTGTTAAT >In-frame_ENST00000422447_ENST00000401525_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(amino acids)=517AA_start in transcript=138_stop in transcript=1691 MFHLRPLPRPAQSAAAAAADSGSHCHAPPTTARRAFPIPFGSKSNMATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLA DELALVDVIEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLLI VSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKE QWKEVHKQVVESTMIKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSMDGMFLSASSNTETVHIFKLETVKEKPPEEPTTWTGYFGK VLMASTSYLPSQVTEMFNQGRAFATVRLPFCGHKNICSLATIQKIPRLLVGAADGYLYMYNLDPQEGGECALMKQHRLDGSLETTNEILD -------------------------------------------------------------- >In-frame_ENST00000422447_ENST00000404704_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(transcript)=1816nt_BP=996nt AGTCTGCCGGTCGGTTGTCTGGCTGCGCGCGCCACCCGGGCCTCTCCAGTGCCCCGCCTGGCTCGGCATCCACCCCCAGCCCGACTCACA CGTGGGTTCCCGCACGTCCGCCGGCCCCCCCCGCTGACGTCAGCATAGCTGTTCCACTTAAGGCCCCTCCCGCGCCCAGCTCAGAGTGCT GCAGCCGCTGCCGCCGATTCCGGATCTCATTGCCACGCGCCCCCGACGACCGCCCGACGTGCATTCCCGATTCCTTTTGGTTCCAAGTCC AATATGGCAACTCTAAAGGATCAGCTGATTTATAATCTTCTAAAGGAAGAACAGACCCCCCAGAATAAGATTACAGTTGTTGGGGTTGGT GCTGTTGGCATGGCCTGTGCCATCAGTATCTTAATGAAGGACTTGGCAGATGAACTTGCTCTTGTTGATGTCATCGAAGACAAATTGAAG GGAGAGATGATGGATCTCCAACATGGCAGCCTTTTCCTTAGAACACCAAAGATTGTCTCTGGCAAAGACTATAATGTAACTGCAAACTCC AAGCTGGTCATTATCACGGCTGGGGCACGTCAGCAAGAGGGAGAAAGCCGTCTTAATTTGGTCCAGCGTAACGTGAACATCTTTAAATTC ATCATTCCTAATGTTGTAAAATACAGCCCGAACTGCAAGTTGCTTATTGTTTCAAATCCAGTGGATATCTTGACCTACGTGGCTTGGAAG ATAAGTGGTTTTCCCAAAAACCGTGTTATTGGAAGCGGTTGCAATCTGGATTCAGCCCGATTCCGTTACCTAATGGGGGAAAGGCTGGGA GTTCACCCATTAAGCTGTCATGGGTGGGTCCTTGGGGAACATGGAGATTCCAGTGTGCCTGTATGGAGTGGAATGAATGTTGCTGGTGTC TCTCTGAAGACTCTGCACCCAGATTTAGGGACTGATAAAGATAAGGAACAGTGGAAAGAGGTTCACAAGCAGGTGGTTGAGAGCACCATG ATTAAGGGGACCGTGATTAGGGTATTTTCCATTCCAGAAGGACAAAAACTCTTTGAGTTTCGGAGAGGAGTAAAGAGGTGCGTGAGCATC TGCTCCCTGGCCTTCAGCATGGACGGCATGTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGCACATCTTCAAACTCGAGACTGTGAAA GAAAAACCCCCAGAGGAGCCCACCACCTGGACCGGGTACTTCGGGAAAGTGCTCATGGCCTCCACCAGCTACCTGCCTTCCCAAGTGACA GAAATGTTCAACCAGGGCAGAGCCTTCGCCACGGTCCGCCTGCCATTCTGCGGCCACAAAAACATCTGCTCGCTAGCCACAATTCAGAAG ATCCCGCGGTTGTTGGTGGGTGCCGCCGACGGGTACCTGTACATGTACAACCTGGACCCCCAGGAGGGCGGCGAGTGTGCCCTGATGAAG CAGCACCGGCTGGACGGCAGTCTGGAAACGACCAATGAGATCTTGGACTCTGCCTCTCACGACTGCCCCTTAGTCACTCAGACATACGGC GCAGCTGCAGGAAAAGCCTACACAGACGACCTGGGTGCTGTGGGTGGCGCCTGCCTGGAGGACGAGGCCAGCGCCCTGCGCCTGGATGAG GACAGCGAGCACCCGCCCATGATTCTTCGGACTGACTGAACTTGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGA GGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCAGAGACTTTATTAAAAAAAAAAAAAGATTGTAGTGG >In-frame_ENST00000422447_ENST00000404704_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(amino acids)=506AA_start in transcript=138_stop in transcript=1658 MFHLRPLPRPAQSAAAAAADSGSHCHAPPTTARRAFPIPFGSKSNMATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLA DELALVDVIEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLLI VSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKE QWKEVHKQVVESTMIKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSMDGMFLSASSNTETVHIFKLETVKEKPPEEPTTWTGYFGK VLMASTSYLPSQVTEMFNQGRAFATVRLPFCGHKNICSLATIQKIPRLLVGAADGYLYMYNLDPQEGGECALMKQHRLDGSLETTNEILD -------------------------------------------------------------- >In-frame_ENST00000430553_ENST00000288828_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(transcript)=4223nt_BP=648nt AGTGCTGCAGCCGCTGCCGCCGATTCCGGATCTCATTGCCACGCGCCCCCGACGACCGCCCGACGTGCATTCCCGATTCCTTTTGGTTCC AAGTCCAATATGGCAACTCTAAAGGATCAGCTGATTTATAATCTTCTAAAGGAAGAACAGACCCCCCAGAATAAGATTACAGTTGTTGGG GTTGGTGCTGTTGGCATGGCCTGTGCCATCAGTATCTTAATGAAGGACTTGGCAGATGAACTTGCTCTTGTTGATGTCATCGAAGACAAA TTGAAGGGAGAGATGATGGATCTCCAACATGGCAGCCTTTTCCTTAGAACACCAAAGATTGTCTCTGGCAAAGTGGATATCTTGACCTAC GTGGCTTGGAAGATAAGTGGTTTTCCCAAAAACCGTGTTATTGGAAGCGGTTGCAATCTGGATTCAGCCCGATTCCGTTACCTAATGGGG GAAAGGCTGGGAGTTCACCCATTAAGCTGTCATGGGTGGGTCCTTGGGGAACATGGAGATTCCAGTGTGCCTGTATGGAGTGGAATGAAT GTTGCTGGTGTCTCTCTGAAGACTCTGCACCCAGATTTAGGGACTGATAAAGATAAGGAACAGTGGAAAGAGGTTCACAAGCAGGTGGTT GAGAGCACCATGATTAAGGGGACCGTGATTAGGGTATTTTCCATTCCAGAAGGACAAAAACTCTTTGAGTTTCGGAGAGGAGTAAAGAGG TGCGTGAGCATCTGCTCCCTGGCCTTCAGCATGGACGGCATGTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGCACATCTTCAAACTC GAGACTGTGAAAGAAAAACCCCCAGAGGAGCCCACCACCTGGACCGGGTACTTCGGGAAAGTGCTCATGGCCTCCACCAGCTACCTGCCT TCCCAAGTGACAGAAATGTTCAACCAGGGCAGAGCCTTCGCCACGGTCCGCCTGCCATTCTGCGGCCACAAAAACATCTGCTCGCTAGCC ACAATTCAGAAGATCCCGCGGTTGTTGGTGGGTGCCGCCGACGGGTACCTGTACATGTACAACCTGGACCCCCAGGAGGGCGGCGAGTGT GCCCTGATGAAGCAGCACCGGCTGGACGGCAGTCTGGAAACGACCAATGAGATCTTGGACTCTGCCTCTCACGACTGCCCCTTAGTCACT CAGACATACGGCGCAGCTGCAGGAAAAGGTACTTACGTGCCTTCATCCCCAACGAGACTTGCCTACACAGACGACCTGGGTGCTGTGGGT GGCGCCTGCCTGGAGGACGAGGCCAGCGCCCTGCGCCTGGATGAGGACAGCGAGCACCCGCCCATGATTCTTCGGACTGACTGAACTTGA CCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGA GAGGATGGCAGAGACTTTATTAAAAAAAAAAAAAGATTGTAGTGGTAGTCTAACTCCATAACGCTGAGGAAATACATCATTTTCACTTCA GTGGCTTTTAAATCCTGCTTATGAATTTTAGCTTTTTGTTTGTTTGTTTTCTCTTTTTGCCAAAATTAACTGTTTGGTGAAGCCCGCAAA ACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTTCCAGCCACCTGCCGTTGGGTTTTTTCATA TCTGTACATAATGCCGAGTGCGTAAGGAAACCGTGGCGTCGCGCACAGTGGGTCTGCTTGTCAAGGCCAGTTCTGCAGTGACAGGCCCAG GGGCTGCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGACCATTTTCCCTCCGTTT TATTTTGTTAATTAAATTCTTTCCAAATTGGATCGCTCTGGGATTTCTTCCATGGTGGACTTTTGTTTCTGATCTTGTTTTCCCTGTGGA TATTGGAGGACAGCGAGGTTCTTTCTGATACTAAAAACCTTTCTTTCAGGCAGCAAATGAACTTGAAAGGTTGCCTGGACTCGCTGGAGC AAAGGAAAGCGATTTTGTTTGTATAATTAAATGATCTGTTCTTCTACTTCACTCTTCCTGTTGAAAAACTGTGTGATTTTTTTTTTTTTT TAAGTAAAGTTTGTAGCTCCTCCCATGCCCAGGAAAGCACAGAACTCAAGTGTGGTGGCCGTCTGAGCTGTCCTTTCGCTGGCCCCGCTG TCCGCAGGGGCTTCCTACCTGTGTGAGAGGTCGTAGCGGGAGACAGCAACAGAGAGTAGGCGGCTGGGCCACGTCCTTCACAGGGCGTCA TGTGCCTTTCTATTTTCATCTTAGAAAATTTCCTCAGCAAACCGATGAGAGATTGTGGTTGCAAGCTTCAGTATTTGCCTCGCTTCCCTT CCCTTTTCATATTTACAGAATTAAAACAACCTCAAGTACCTCAGACTCTGCATTCCAAACCAAGGCACCCAGCAGCCAAAGTGTCGAGGG CATTTAAGTGGCATTAATGGCAGGAGAGATGGTTTTAGAATCTATGGAGTGGTGGAAGTTACGGATAGAAGGGAAAAGGCAAAAACTATT TACCCTGCCTTTGCAGGCTGGGGTTTTTGAACCGAGGAAGGCTGGGACGCCTGTTTCCAGATGGTTGTCATGGTCACGCTGGGCGAAGAG CTGGAGGGGAGTTGTCCCCTCAGCTGAGCGGCTGCGGTGAAATGCCCCAGTGTTCCTGGGTTGGCTTTACGGCAAACTAAATGCAGGGGA CGCTGGAGTCCGACTCACCTACACCGGCTTCCTCCCAGCCGCTGGTGTGCGGCACACACAACATCTGCATTAGGCAGAGGTGCAAGTGGG CTGATTGAACTTTTCCTTCAAAACCTGCTTGTCTGTCCTGGACCTTTGATGAAATGGGATCCCGGTCACGCAGGCTGAGACAGTGGGGAC CGCCGAGGCCAGAGTGGGCTATGCTTGAGCAGGGATGAGAAGGGCCGCGGCAGCACGCAGCCTTGACCCACGCCTGCGTCTTGTGGTGCA AGGCCAGAGGGCTCTCTCTAGAACCTGACCGTGCACTCCATCTCCTGGGAGCCACTTTTGGCAAGAGTGAGTGTGGGGGGAAAAAGTGTG CACAAGAGATACGGAACCCTGAGCTAGGGTTTCCTGTCACCAAAGAGTGAGCTGCATTTCCAGTTCTGCGTTAAAGTATCGTTTGTTCTG GTGCCTGCCTGTGGTGGTGATTTGGAGACTCAAATTTCCTTTGCCAGGTCTCTTTTGTCTTTCTTTGGGATTGGTAGTATAGAAGATGCT GGGAATTGTCTTCCTCGCTCAGCCTCGGCTTCCCGCACTGTAAGATGAGGCAGTTGCAGAGGAGGCCTCGGACGTCCTGTGACCCTCGGC CCACACTCCCCCTTGGGTGGCCCTGGCAGGGCTGGCTAGGTGCGTTCCCTGCAGACCACGGGAAGCCCTGTGCTTGCCTGGGTCAGGGCT AAGCTGTGCGCCCTAGAGGAGGGAGGAGGACTGCAGATTCTTGGTCGAGAAGAATGAAGAGGATTTCTGTGTTTGCTGAGCAGCCATTGT GGAGGGTTACCCGCCTCCACTTTCCCGTTGCCCATTTCACTGCCACCAGCTCCTCTTCCTCTGCTCGAACCTATGAGTCCCAGCCTCACT GGCGGCCTCAGACATGCTCAGGAGTGACGGGGACAGAGGGAGGCCGCTGAGTTGCCCGTTAGAACTCTTACTGCTGCGCCAGTGACCCAG GTGGAGAGGGACCCTGAACCAAACAGAACGTGTGCTAATTTTCCGAACTCCAAACTGTACACTCATATTCATTTTTAAATTGTATTTTTC CAAACTTCAAAAAGGACGATGAGCGTGGGGGATAGGAAACAAAACCTGTAAACGTTGTGAATGGGCTCAGTGGACTCTGGGACCAAACCT TCTGTAATCTCTAAAACAATGGGACCAAGAGCTGGATGGAACCTGGAGTCAAAAAGAACTGCTTCAGTCCCCGCTGTACCGCCTGCCTAG CTGTGGGAGCAGGCAGGGCGCCTGGGAGCCTGCGTTTTCTGGACCGTTCCATGGGACTCATCCCTACCTCACAGGGCTGTTGTGAGGTGT >In-frame_ENST00000430553_ENST00000288828_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(amino acids)=414AA_start in transcript=99_stop in transcript=1343 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLRTPKIVSGKVDILTYVAW KISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVEST MIKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSMDGMFLSASSNTETVHIFKLETVKEKPPEEPTTWTGYFGKVLMASTSYLPSQV TEMFNQGRAFATVRLPFCGHKNICSLATIQKIPRLLVGAADGYLYMYNLDPQEGGECALMKQHRLDGSLETTNEILDSASHDCPLVTQTY -------------------------------------------------------------- >In-frame_ENST00000430553_ENST00000401525_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(transcript)=1921nt_BP=648nt AGTGCTGCAGCCGCTGCCGCCGATTCCGGATCTCATTGCCACGCGCCCCCGACGACCGCCCGACGTGCATTCCCGATTCCTTTTGGTTCC AAGTCCAATATGGCAACTCTAAAGGATCAGCTGATTTATAATCTTCTAAAGGAAGAACAGACCCCCCAGAATAAGATTACAGTTGTTGGG GTTGGTGCTGTTGGCATGGCCTGTGCCATCAGTATCTTAATGAAGGACTTGGCAGATGAACTTGCTCTTGTTGATGTCATCGAAGACAAA TTGAAGGGAGAGATGATGGATCTCCAACATGGCAGCCTTTTCCTTAGAACACCAAAGATTGTCTCTGGCAAAGTGGATATCTTGACCTAC GTGGCTTGGAAGATAAGTGGTTTTCCCAAAAACCGTGTTATTGGAAGCGGTTGCAATCTGGATTCAGCCCGATTCCGTTACCTAATGGGG GAAAGGCTGGGAGTTCACCCATTAAGCTGTCATGGGTGGGTCCTTGGGGAACATGGAGATTCCAGTGTGCCTGTATGGAGTGGAATGAAT GTTGCTGGTGTCTCTCTGAAGACTCTGCACCCAGATTTAGGGACTGATAAAGATAAGGAACAGTGGAAAGAGGTTCACAAGCAGGTGGTT GAGAGCACCATGATTAAGGGGACCGTGATTAGGGTATTTTCCATTCCAGAAGGACAAAAACTCTTTGAGTTTCGGAGAGGAGTAAAGAGG TGCGTGAGCATCTGCTCCCTGGCCTTCAGCATGGACGGCATGTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGCACATCTTCAAACTC GAGACTGTGAAAGAAAAACCCCCAGAGGAGCCCACCACCTGGACCGGGTACTTCGGGAAAGTGCTCATGGCCTCCACCAGCTACCTGCCT TCCCAAGTGACAGAAATGTTCAACCAGGGCAGAGCCTTCGCCACGGTCCGCCTGCCATTCTGCGGCCACAAAAACATCTGCTCGCTAGCC ACAATTCAGAAGATCCCGCGGTTGTTGGTGGGTGCCGCCGACGGGTACCTGTACATGTACAACCTGGACCCCCAGGAGGGCGGCGAGTGT GCCCTGATGAAGCAGCACCGGCTGGACGGCAGTCTGGAAACGACCAATGAGATCTTGGACTCTGCCTCTCACGACTGCCCCTTAGTCACT CAGACATACGGCGCAGCTGCAGGAAAAGGTACTTACGTGCCTTCATCCCCAACGAGACTTGCCTACACAGACGACCTGGGTGCTGTGGGT GGCGCCTGCCTGGAGGACGAGGCCAGCGCCCTGCGCCTGGATGAGGACAGCGAGCACCCGCCCATGATTCTTCGGACTGACTGAACTTGA CCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGA GAGGATGGCAGAGACTTTATTAAAAAAAAAAAAAGATTGTAGTGGTAGTCTAACTCCATAACGCTGAGGAAATACATCATTTTCACTTCA GTGGCTTTTAAATCCTGCTTATGAATTTTAGCTTTTTGTTTGTTTGTTTTCTCTTTTTGCCAAAATTAACTGTTTGGTGAAGCCCGCAAA ACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTTCCAGCCACCTGCCGTTGGGTTTTTTCATA TCTGTACATAATGCCGAGTGCGTAAGGAAACCGTGGCGTCGCGCACAGTGGGTCTGCTTGTCAAGGCCAGTTCTGCAGTGACAGGCCCAG GGGCTGCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGACCATTTTCCCTCCGTTT >In-frame_ENST00000430553_ENST00000401525_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(amino acids)=414AA_start in transcript=99_stop in transcript=1343 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLRTPKIVSGKVDILTYVAW KISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVEST MIKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSMDGMFLSASSNTETVHIFKLETVKEKPPEEPTTWTGYFGKVLMASTSYLPSQV TEMFNQGRAFATVRLPFCGHKNICSLATIQKIPRLLVGAADGYLYMYNLDPQEGGECALMKQHRLDGSLETTNEILDSASHDCPLVTQTY -------------------------------------------------------------- >In-frame_ENST00000430553_ENST00000404704_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(transcript)=1468nt_BP=648nt AGTGCTGCAGCCGCTGCCGCCGATTCCGGATCTCATTGCCACGCGCCCCCGACGACCGCCCGACGTGCATTCCCGATTCCTTTTGGTTCC AAGTCCAATATGGCAACTCTAAAGGATCAGCTGATTTATAATCTTCTAAAGGAAGAACAGACCCCCCAGAATAAGATTACAGTTGTTGGG GTTGGTGCTGTTGGCATGGCCTGTGCCATCAGTATCTTAATGAAGGACTTGGCAGATGAACTTGCTCTTGTTGATGTCATCGAAGACAAA TTGAAGGGAGAGATGATGGATCTCCAACATGGCAGCCTTTTCCTTAGAACACCAAAGATTGTCTCTGGCAAAGTGGATATCTTGACCTAC GTGGCTTGGAAGATAAGTGGTTTTCCCAAAAACCGTGTTATTGGAAGCGGTTGCAATCTGGATTCAGCCCGATTCCGTTACCTAATGGGG GAAAGGCTGGGAGTTCACCCATTAAGCTGTCATGGGTGGGTCCTTGGGGAACATGGAGATTCCAGTGTGCCTGTATGGAGTGGAATGAAT GTTGCTGGTGTCTCTCTGAAGACTCTGCACCCAGATTTAGGGACTGATAAAGATAAGGAACAGTGGAAAGAGGTTCACAAGCAGGTGGTT GAGAGCACCATGATTAAGGGGACCGTGATTAGGGTATTTTCCATTCCAGAAGGACAAAAACTCTTTGAGTTTCGGAGAGGAGTAAAGAGG TGCGTGAGCATCTGCTCCCTGGCCTTCAGCATGGACGGCATGTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGCACATCTTCAAACTC GAGACTGTGAAAGAAAAACCCCCAGAGGAGCCCACCACCTGGACCGGGTACTTCGGGAAAGTGCTCATGGCCTCCACCAGCTACCTGCCT TCCCAAGTGACAGAAATGTTCAACCAGGGCAGAGCCTTCGCCACGGTCCGCCTGCCATTCTGCGGCCACAAAAACATCTGCTCGCTAGCC ACAATTCAGAAGATCCCGCGGTTGTTGGTGGGTGCCGCCGACGGGTACCTGTACATGTACAACCTGGACCCCCAGGAGGGCGGCGAGTGT GCCCTGATGAAGCAGCACCGGCTGGACGGCAGTCTGGAAACGACCAATGAGATCTTGGACTCTGCCTCTCACGACTGCCCCTTAGTCACT CAGACATACGGCGCAGCTGCAGGAAAAGCCTACACAGACGACCTGGGTGCTGTGGGTGGCGCCTGCCTGGAGGACGAGGCCAGCGCCCTG CGCCTGGATGAGGACAGCGAGCACCCGCCCATGATTCTTCGGACTGACTGAACTTGACCTGTGACCTCTGACCCGGGGAGCAGAGAACAC TGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCAGAGACTTTATTAAAAAAAAAAAA >In-frame_ENST00000430553_ENST00000404704_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(amino acids)=403AA_start in transcript=99_stop in transcript=1310 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLRTPKIVSGKVDILTYVAW KISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVEST MIKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSMDGMFLSASSNTETVHIFKLETVKEKPPEEPTTWTGYFGKVLMASTSYLPSQV TEMFNQGRAFATVRLPFCGHKNICSLATIQKIPRLLVGAADGYLYMYNLDPQEGGECALMKQHRLDGSLETTNEILDSASHDCPLVTQTY -------------------------------------------------------------- >In-frame_ENST00000540430_ENST00000288828_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(transcript)=4667nt_BP=1092nt TTGGGCGGGGCGTAAAAGCCGGGCGTTCGGAGGACCCAGCAATTAGTCTGATTTCCGCCCACCTTTCCGAGCGGGAAGGAGAGCCACAAA GCGCGCATGCGCGCGGATCACCGCAGGCTCCTGTGCCTTGGGCTTGAGCTTTGTGGCAGTTAATGGCTTTTCTGCACGTATCTCTGGTGT TTACTTGAGAAGCCTGGCTGTGTCCTTGCTGTAGGAGCCGGAGTAGCTCAGAGTGATCTTGTCTGAGGAAAGGCCAGCCCCACTTGGGGT TAATAAACCGCGATGGGTGAACCCTCAGGAGGCTATACTTACACCCAAACGTCGATATTCCTTTTCCACGCTAAGATTCCTTTTGGTTCC AAGTCCAATATGGCAACTCTAAAGGATCAGCTGATTTATAATCTTCTAAAGGAAGAACAGACCCCCCAGAATAAGATTACAGTTGTTGGG GTTGGTGCTGTTGGCATGGCCTGTGCCATCAGTATCTTAATGAAGGACTTGGCAGATGAACTTGCTCTTGTTGATGTCATCGAAGACAAA TTGAAGGGAGAGATGATGGATCTCCAACATGGCAGCCTTTTCCTTAGAACACCAAAGATTGTCTCTGGCAAAGACTATAATGTAACTGCA AACTCCAAGCTGGTCATTATCACGGCTGGGGCACGTCAGCAAGAGGGAGAAAGCCGTCTTAATTTGGTCCAGCGTAACGTGAACATCTTT AAATTCATCATTCCTAATGTTGTAAAATACAGCCCGAACTGCAAGTTGCTTATTGTTTCAAATCCAGTGGATATCTTGACCTACGTGGCT TGGAAGATAAGTGGTTTTCCCAAAAACCGTGTTATTGGAAGCGGTTGCAATCTGGATTCAGCCCGATTCCGTTACCTAATGGGGGAAAGG CTGGGAGTTCACCCATTAAGCTGTCATGGGTGGGTCCTTGGGGAACATGGAGATTCCAGTGTGCCTGTATGGAGTGGAATGAATGTTGCT GGTGTCTCTCTGAAGACTCTGCACCCAGATTTAGGGACTGATAAAGATAAGGAACAGTGGAAAGAGGTTCACAAGCAGGTGGTTGAGAGC ACCATGATTAAGGGGACCGTGATTAGGGTATTTTCCATTCCAGAAGGACAAAAACTCTTTGAGTTTCGGAGAGGAGTAAAGAGGTGCGTG AGCATCTGCTCCCTGGCCTTCAGCATGGACGGCATGTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGCACATCTTCAAACTCGAGACT GTGAAAGAAAAACCCCCAGAGGAGCCCACCACCTGGACCGGGTACTTCGGGAAAGTGCTCATGGCCTCCACCAGCTACCTGCCTTCCCAA GTGACAGAAATGTTCAACCAGGGCAGAGCCTTCGCCACGGTCCGCCTGCCATTCTGCGGCCACAAAAACATCTGCTCGCTAGCCACAATT CAGAAGATCCCGCGGTTGTTGGTGGGTGCCGCCGACGGGTACCTGTACATGTACAACCTGGACCCCCAGGAGGGCGGCGAGTGTGCCCTG ATGAAGCAGCACCGGCTGGACGGCAGTCTGGAAACGACCAATGAGATCTTGGACTCTGCCTCTCACGACTGCCCCTTAGTCACTCAGACA TACGGCGCAGCTGCAGGAAAAGGTACTTACGTGCCTTCATCCCCAACGAGACTTGCCTACACAGACGACCTGGGTGCTGTGGGTGGCGCC TGCCTGGAGGACGAGGCCAGCGCCCTGCGCCTGGATGAGGACAGCGAGCACCCGCCCATGATTCTTCGGACTGACTGAACTTGACCTGTG ACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGAT GGCAGAGACTTTATTAAAAAAAAAAAAAGATTGTAGTGGTAGTCTAACTCCATAACGCTGAGGAAATACATCATTTTCACTTCAGTGGCT TTTAAATCCTGCTTATGAATTTTAGCTTTTTGTTTGTTTGTTTTCTCTTTTTGCCAAAATTAACTGTTTGGTGAAGCCCGCAAAACCTCC TCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTTCCAGCCACCTGCCGTTGGGTTTTTTCATATCTGTA CATAATGCCGAGTGCGTAAGGAAACCGTGGCGTCGCGCACAGTGGGTCTGCTTGTCAAGGCCAGTTCTGCAGTGACAGGCCCAGGGGCTG CCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGACCATTTTCCCTCCGTTTTATTTT GTTAATTAAATTCTTTCCAAATTGGATCGCTCTGGGATTTCTTCCATGGTGGACTTTTGTTTCTGATCTTGTTTTCCCTGTGGATATTGG AGGACAGCGAGGTTCTTTCTGATACTAAAAACCTTTCTTTCAGGCAGCAAATGAACTTGAAAGGTTGCCTGGACTCGCTGGAGCAAAGGA AAGCGATTTTGTTTGTATAATTAAATGATCTGTTCTTCTACTTCACTCTTCCTGTTGAAAAACTGTGTGATTTTTTTTTTTTTTTAAGTA AAGTTTGTAGCTCCTCCCATGCCCAGGAAAGCACAGAACTCAAGTGTGGTGGCCGTCTGAGCTGTCCTTTCGCTGGCCCCGCTGTCCGCA GGGGCTTCCTACCTGTGTGAGAGGTCGTAGCGGGAGACAGCAACAGAGAGTAGGCGGCTGGGCCACGTCCTTCACAGGGCGTCATGTGCC TTTCTATTTTCATCTTAGAAAATTTCCTCAGCAAACCGATGAGAGATTGTGGTTGCAAGCTTCAGTATTTGCCTCGCTTCCCTTCCCTTT TCATATTTACAGAATTAAAACAACCTCAAGTACCTCAGACTCTGCATTCCAAACCAAGGCACCCAGCAGCCAAAGTGTCGAGGGCATTTA AGTGGCATTAATGGCAGGAGAGATGGTTTTAGAATCTATGGAGTGGTGGAAGTTACGGATAGAAGGGAAAAGGCAAAAACTATTTACCCT GCCTTTGCAGGCTGGGGTTTTTGAACCGAGGAAGGCTGGGACGCCTGTTTCCAGATGGTTGTCATGGTCACGCTGGGCGAAGAGCTGGAG GGGAGTTGTCCCCTCAGCTGAGCGGCTGCGGTGAAATGCCCCAGTGTTCCTGGGTTGGCTTTACGGCAAACTAAATGCAGGGGACGCTGG AGTCCGACTCACCTACACCGGCTTCCTCCCAGCCGCTGGTGTGCGGCACACACAACATCTGCATTAGGCAGAGGTGCAAGTGGGCTGATT GAACTTTTCCTTCAAAACCTGCTTGTCTGTCCTGGACCTTTGATGAAATGGGATCCCGGTCACGCAGGCTGAGACAGTGGGGACCGCCGA GGCCAGAGTGGGCTATGCTTGAGCAGGGATGAGAAGGGCCGCGGCAGCACGCAGCCTTGACCCACGCCTGCGTCTTGTGGTGCAAGGCCA GAGGGCTCTCTCTAGAACCTGACCGTGCACTCCATCTCCTGGGAGCCACTTTTGGCAAGAGTGAGTGTGGGGGGAAAAAGTGTGCACAAG AGATACGGAACCCTGAGCTAGGGTTTCCTGTCACCAAAGAGTGAGCTGCATTTCCAGTTCTGCGTTAAAGTATCGTTTGTTCTGGTGCCT GCCTGTGGTGGTGATTTGGAGACTCAAATTTCCTTTGCCAGGTCTCTTTTGTCTTTCTTTGGGATTGGTAGTATAGAAGATGCTGGGAAT TGTCTTCCTCGCTCAGCCTCGGCTTCCCGCACTGTAAGATGAGGCAGTTGCAGAGGAGGCCTCGGACGTCCTGTGACCCTCGGCCCACAC TCCCCCTTGGGTGGCCCTGGCAGGGCTGGCTAGGTGCGTTCCCTGCAGACCACGGGAAGCCCTGTGCTTGCCTGGGTCAGGGCTAAGCTG TGCGCCCTAGAGGAGGGAGGAGGACTGCAGATTCTTGGTCGAGAAGAATGAAGAGGATTTCTGTGTTTGCTGAGCAGCCATTGTGGAGGG TTACCCGCCTCCACTTTCCCGTTGCCCATTTCACTGCCACCAGCTCCTCTTCCTCTGCTCGAACCTATGAGTCCCAGCCTCACTGGCGGC CTCAGACATGCTCAGGAGTGACGGGGACAGAGGGAGGCCGCTGAGTTGCCCGTTAGAACTCTTACTGCTGCGCCAGTGACCCAGGTGGAG AGGGACCCTGAACCAAACAGAACGTGTGCTAATTTTCCGAACTCCAAACTGTACACTCATATTCATTTTTAAATTGTATTTTTCCAAACT TCAAAAAGGACGATGAGCGTGGGGGATAGGAAACAAAACCTGTAAACGTTGTGAATGGGCTCAGTGGACTCTGGGACCAAACCTTCTGTA ATCTCTAAAACAATGGGACCAAGAGCTGGATGGAACCTGGAGTCAAAAAGAACTGCTTCAGTCCCCGCTGTACCGCCTGCCTAGCTGTGG GAGCAGGCAGGGCGCCTGGGAGCCTGCGTTTTCTGGACCGTTCCATGGGACTCATCCCTACCTCACAGGGCTGTTGTGAGGTGTTGTGTG >In-frame_ENST00000540430_ENST00000288828_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(amino acids)=501AA_start in transcript=282_stop in transcript=1787 MGEPSGGYTYTQTSIFLFHAKIPFGSKSNMATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGE MMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLLIVSNPVDILTYVAWKIS GFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESTMIK GTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSMDGMFLSASSNTETVHIFKLETVKEKPPEEPTTWTGYFGKVLMASTSYLPSQVTEM FNQGRAFATVRLPFCGHKNICSLATIQKIPRLLVGAADGYLYMYNLDPQEGGECALMKQHRLDGSLETTNEILDSASHDCPLVTQTYGAA -------------------------------------------------------------- >In-frame_ENST00000540430_ENST00000401525_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(transcript)=2365nt_BP=1092nt TTGGGCGGGGCGTAAAAGCCGGGCGTTCGGAGGACCCAGCAATTAGTCTGATTTCCGCCCACCTTTCCGAGCGGGAAGGAGAGCCACAAA GCGCGCATGCGCGCGGATCACCGCAGGCTCCTGTGCCTTGGGCTTGAGCTTTGTGGCAGTTAATGGCTTTTCTGCACGTATCTCTGGTGT TTACTTGAGAAGCCTGGCTGTGTCCTTGCTGTAGGAGCCGGAGTAGCTCAGAGTGATCTTGTCTGAGGAAAGGCCAGCCCCACTTGGGGT TAATAAACCGCGATGGGTGAACCCTCAGGAGGCTATACTTACACCCAAACGTCGATATTCCTTTTCCACGCTAAGATTCCTTTTGGTTCC AAGTCCAATATGGCAACTCTAAAGGATCAGCTGATTTATAATCTTCTAAAGGAAGAACAGACCCCCCAGAATAAGATTACAGTTGTTGGG GTTGGTGCTGTTGGCATGGCCTGTGCCATCAGTATCTTAATGAAGGACTTGGCAGATGAACTTGCTCTTGTTGATGTCATCGAAGACAAA TTGAAGGGAGAGATGATGGATCTCCAACATGGCAGCCTTTTCCTTAGAACACCAAAGATTGTCTCTGGCAAAGACTATAATGTAACTGCA AACTCCAAGCTGGTCATTATCACGGCTGGGGCACGTCAGCAAGAGGGAGAAAGCCGTCTTAATTTGGTCCAGCGTAACGTGAACATCTTT AAATTCATCATTCCTAATGTTGTAAAATACAGCCCGAACTGCAAGTTGCTTATTGTTTCAAATCCAGTGGATATCTTGACCTACGTGGCT TGGAAGATAAGTGGTTTTCCCAAAAACCGTGTTATTGGAAGCGGTTGCAATCTGGATTCAGCCCGATTCCGTTACCTAATGGGGGAAAGG CTGGGAGTTCACCCATTAAGCTGTCATGGGTGGGTCCTTGGGGAACATGGAGATTCCAGTGTGCCTGTATGGAGTGGAATGAATGTTGCT GGTGTCTCTCTGAAGACTCTGCACCCAGATTTAGGGACTGATAAAGATAAGGAACAGTGGAAAGAGGTTCACAAGCAGGTGGTTGAGAGC ACCATGATTAAGGGGACCGTGATTAGGGTATTTTCCATTCCAGAAGGACAAAAACTCTTTGAGTTTCGGAGAGGAGTAAAGAGGTGCGTG AGCATCTGCTCCCTGGCCTTCAGCATGGACGGCATGTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGCACATCTTCAAACTCGAGACT GTGAAAGAAAAACCCCCAGAGGAGCCCACCACCTGGACCGGGTACTTCGGGAAAGTGCTCATGGCCTCCACCAGCTACCTGCCTTCCCAA GTGACAGAAATGTTCAACCAGGGCAGAGCCTTCGCCACGGTCCGCCTGCCATTCTGCGGCCACAAAAACATCTGCTCGCTAGCCACAATT CAGAAGATCCCGCGGTTGTTGGTGGGTGCCGCCGACGGGTACCTGTACATGTACAACCTGGACCCCCAGGAGGGCGGCGAGTGTGCCCTG ATGAAGCAGCACCGGCTGGACGGCAGTCTGGAAACGACCAATGAGATCTTGGACTCTGCCTCTCACGACTGCCCCTTAGTCACTCAGACA TACGGCGCAGCTGCAGGAAAAGGTACTTACGTGCCTTCATCCCCAACGAGACTTGCCTACACAGACGACCTGGGTGCTGTGGGTGGCGCC TGCCTGGAGGACGAGGCCAGCGCCCTGCGCCTGGATGAGGACAGCGAGCACCCGCCCATGATTCTTCGGACTGACTGAACTTGACCTGTG ACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGAT GGCAGAGACTTTATTAAAAAAAAAAAAAGATTGTAGTGGTAGTCTAACTCCATAACGCTGAGGAAATACATCATTTTCACTTCAGTGGCT TTTAAATCCTGCTTATGAATTTTAGCTTTTTGTTTGTTTGTTTTCTCTTTTTGCCAAAATTAACTGTTTGGTGAAGCCCGCAAAACCTCC TCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTTCCAGCCACCTGCCGTTGGGTTTTTTCATATCTGTA CATAATGCCGAGTGCGTAAGGAAACCGTGGCGTCGCGCACAGTGGGTCTGCTTGTCAAGGCCAGTTCTGCAGTGACAGGCCCAGGGGCTG CCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGACCATTTTCCCTCCGTTTTATTTT >In-frame_ENST00000540430_ENST00000401525_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(amino acids)=501AA_start in transcript=282_stop in transcript=1787 MGEPSGGYTYTQTSIFLFHAKIPFGSKSNMATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGE MMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLLIVSNPVDILTYVAWKIS GFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESTMIK GTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSMDGMFLSASSNTETVHIFKLETVKEKPPEEPTTWTGYFGKVLMASTSYLPSQVTEM FNQGRAFATVRLPFCGHKNICSLATIQKIPRLLVGAADGYLYMYNLDPQEGGECALMKQHRLDGSLETTNEILDSASHDCPLVTQTYGAA -------------------------------------------------------------- >In-frame_ENST00000540430_ENST00000404704_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(transcript)=1912nt_BP=1092nt TTGGGCGGGGCGTAAAAGCCGGGCGTTCGGAGGACCCAGCAATTAGTCTGATTTCCGCCCACCTTTCCGAGCGGGAAGGAGAGCCACAAA GCGCGCATGCGCGCGGATCACCGCAGGCTCCTGTGCCTTGGGCTTGAGCTTTGTGGCAGTTAATGGCTTTTCTGCACGTATCTCTGGTGT TTACTTGAGAAGCCTGGCTGTGTCCTTGCTGTAGGAGCCGGAGTAGCTCAGAGTGATCTTGTCTGAGGAAAGGCCAGCCCCACTTGGGGT TAATAAACCGCGATGGGTGAACCCTCAGGAGGCTATACTTACACCCAAACGTCGATATTCCTTTTCCACGCTAAGATTCCTTTTGGTTCC AAGTCCAATATGGCAACTCTAAAGGATCAGCTGATTTATAATCTTCTAAAGGAAGAACAGACCCCCCAGAATAAGATTACAGTTGTTGGG GTTGGTGCTGTTGGCATGGCCTGTGCCATCAGTATCTTAATGAAGGACTTGGCAGATGAACTTGCTCTTGTTGATGTCATCGAAGACAAA TTGAAGGGAGAGATGATGGATCTCCAACATGGCAGCCTTTTCCTTAGAACACCAAAGATTGTCTCTGGCAAAGACTATAATGTAACTGCA AACTCCAAGCTGGTCATTATCACGGCTGGGGCACGTCAGCAAGAGGGAGAAAGCCGTCTTAATTTGGTCCAGCGTAACGTGAACATCTTT AAATTCATCATTCCTAATGTTGTAAAATACAGCCCGAACTGCAAGTTGCTTATTGTTTCAAATCCAGTGGATATCTTGACCTACGTGGCT TGGAAGATAAGTGGTTTTCCCAAAAACCGTGTTATTGGAAGCGGTTGCAATCTGGATTCAGCCCGATTCCGTTACCTAATGGGGGAAAGG CTGGGAGTTCACCCATTAAGCTGTCATGGGTGGGTCCTTGGGGAACATGGAGATTCCAGTGTGCCTGTATGGAGTGGAATGAATGTTGCT GGTGTCTCTCTGAAGACTCTGCACCCAGATTTAGGGACTGATAAAGATAAGGAACAGTGGAAAGAGGTTCACAAGCAGGTGGTTGAGAGC ACCATGATTAAGGGGACCGTGATTAGGGTATTTTCCATTCCAGAAGGACAAAAACTCTTTGAGTTTCGGAGAGGAGTAAAGAGGTGCGTG AGCATCTGCTCCCTGGCCTTCAGCATGGACGGCATGTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGCACATCTTCAAACTCGAGACT GTGAAAGAAAAACCCCCAGAGGAGCCCACCACCTGGACCGGGTACTTCGGGAAAGTGCTCATGGCCTCCACCAGCTACCTGCCTTCCCAA GTGACAGAAATGTTCAACCAGGGCAGAGCCTTCGCCACGGTCCGCCTGCCATTCTGCGGCCACAAAAACATCTGCTCGCTAGCCACAATT CAGAAGATCCCGCGGTTGTTGGTGGGTGCCGCCGACGGGTACCTGTACATGTACAACCTGGACCCCCAGGAGGGCGGCGAGTGTGCCCTG ATGAAGCAGCACCGGCTGGACGGCAGTCTGGAAACGACCAATGAGATCTTGGACTCTGCCTCTCACGACTGCCCCTTAGTCACTCAGACA TACGGCGCAGCTGCAGGAAAAGCCTACACAGACGACCTGGGTGCTGTGGGTGGCGCCTGCCTGGAGGACGAGGCCAGCGCCCTGCGCCTG GATGAGGACAGCGAGCACCCGCCCATGATTCTTCGGACTGACTGAACTTGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTT CACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCAGAGACTTTATTAAAAAAAAAAAAAGATTG >In-frame_ENST00000540430_ENST00000404704_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(amino acids)=490AA_start in transcript=282_stop in transcript=1754 MGEPSGGYTYTQTSIFLFHAKIPFGSKSNMATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGE MMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLLIVSNPVDILTYVAWKIS GFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESTMIK GTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSMDGMFLSASSNTETVHIFKLETVKEKPPEEPTTWTGYFGKVLMASTSYLPSQVTEM FNQGRAFATVRLPFCGHKNICSLATIQKIPRLLVGAADGYLYMYNLDPQEGGECALMKQHRLDGSLETTNEILDSASHDCPLVTQTYGAA -------------------------------------------------------------- >In-frame_ENST00000379412_ENST00000288828_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(transcript)=4655nt_BP=1080nt TAAAAGCCGGGCGTTCGGAGGACCCAGCAATTAGTCTGATTTCCGCCCACCTTTCCGAGCGGGAAGGAGAGCCACAAAGCGCGCATGCGC GCGGATCACCGCAGGCTCCTGTGCCTTGGGCTTGAGCTTTGTGGCAGTTAATGGCTTTTCTGCACGTATCTCTGGTGTTTACTTGAGAAG CCTGGCTGTGTCCTTGCTGTAGGAGCCGGAGTAGCTCAGAGTGATCTTGTCTGAGGAAAGGCCAGCCCCACTTGGGGTTAATAAACCGCG ATGGGTGAACCCTCAGGAGGCTATACTTACACCCAAACGTCGATATTCCTTTTCCACGCTAAGATTCCTTTTGGTTCCAAGTCCAATATG GCAACTCTAAAGGATCAGCTGATTTATAATCTTCTAAAGGAAGAACAGACCCCCCAGAATAAGATTACAGTTGTTGGGGTTGGTGCTGTT GGCATGGCCTGTGCCATCAGTATCTTAATGAAGGACTTGGCAGATGAACTTGCTCTTGTTGATGTCATCGAAGACAAATTGAAGGGAGAG ATGATGGATCTCCAACATGGCAGCCTTTTCCTTAGAACACCAAAGATTGTCTCTGGCAAAGACTATAATGTAACTGCAAACTCCAAGCTG GTCATTATCACGGCTGGGGCACGTCAGCAAGAGGGAGAAAGCCGTCTTAATTTGGTCCAGCGTAACGTGAACATCTTTAAATTCATCATT CCTAATGTTGTAAAATACAGCCCGAACTGCAAGTTGCTTATTGTTTCAAATCCAGTGGATATCTTGACCTACGTGGCTTGGAAGATAAGT GGTTTTCCCAAAAACCGTGTTATTGGAAGCGGTTGCAATCTGGATTCAGCCCGATTCCGTTACCTAATGGGGGAAAGGCTGGGAGTTCAC CCATTAAGCTGTCATGGGTGGGTCCTTGGGGAACATGGAGATTCCAGTGTGCCTGTATGGAGTGGAATGAATGTTGCTGGTGTCTCTCTG AAGACTCTGCACCCAGATTTAGGGACTGATAAAGATAAGGAACAGTGGAAAGAGGTTCACAAGCAGGTGGTTGAGAGCACCATGATTAAG GGGACCGTGATTAGGGTATTTTCCATTCCAGAAGGACAAAAACTCTTTGAGTTTCGGAGAGGAGTAAAGAGGTGCGTGAGCATCTGCTCC CTGGCCTTCAGCATGGACGGCATGTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGCACATCTTCAAACTCGAGACTGTGAAAGAAAAA CCCCCAGAGGAGCCCACCACCTGGACCGGGTACTTCGGGAAAGTGCTCATGGCCTCCACCAGCTACCTGCCTTCCCAAGTGACAGAAATG TTCAACCAGGGCAGAGCCTTCGCCACGGTCCGCCTGCCATTCTGCGGCCACAAAAACATCTGCTCGCTAGCCACAATTCAGAAGATCCCG CGGTTGTTGGTGGGTGCCGCCGACGGGTACCTGTACATGTACAACCTGGACCCCCAGGAGGGCGGCGAGTGTGCCCTGATGAAGCAGCAC CGGCTGGACGGCAGTCTGGAAACGACCAATGAGATCTTGGACTCTGCCTCTCACGACTGCCCCTTAGTCACTCAGACATACGGCGCAGCT GCAGGAAAAGGTACTTACGTGCCTTCATCCCCAACGAGACTTGCCTACACAGACGACCTGGGTGCTGTGGGTGGCGCCTGCCTGGAGGAC GAGGCCAGCGCCCTGCGCCTGGATGAGGACAGCGAGCACCCGCCCATGATTCTTCGGACTGACTGAACTTGACCTGTGACCTCTGACCCG GGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCAGAGACTTT ATTAAAAAAAAAAAAAGATTGTAGTGGTAGTCTAACTCCATAACGCTGAGGAAATACATCATTTTCACTTCAGTGGCTTTTAAATCCTGC TTATGAATTTTAGCTTTTTGTTTGTTTGTTTTCTCTTTTTGCCAAAATTAACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTTTGCATG CATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTTCCAGCCACCTGCCGTTGGGTTTTTTCATATCTGTACATAATGCCGAG TGCGTAAGGAAACCGTGGCGTCGCGCACAGTGGGTCTGCTTGTCAAGGCCAGTTCTGCAGTGACAGGCCCAGGGGCTGCCCACCAGGTGT GCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGACCATTTTCCCTCCGTTTTATTTTGTTAATTAAATT CTTTCCAAATTGGATCGCTCTGGGATTTCTTCCATGGTGGACTTTTGTTTCTGATCTTGTTTTCCCTGTGGATATTGGAGGACAGCGAGG TTCTTTCTGATACTAAAAACCTTTCTTTCAGGCAGCAAATGAACTTGAAAGGTTGCCTGGACTCGCTGGAGCAAAGGAAAGCGATTTTGT TTGTATAATTAAATGATCTGTTCTTCTACTTCACTCTTCCTGTTGAAAAACTGTGTGATTTTTTTTTTTTTTTAAGTAAAGTTTGTAGCT CCTCCCATGCCCAGGAAAGCACAGAACTCAAGTGTGGTGGCCGTCTGAGCTGTCCTTTCGCTGGCCCCGCTGTCCGCAGGGGCTTCCTAC CTGTGTGAGAGGTCGTAGCGGGAGACAGCAACAGAGAGTAGGCGGCTGGGCCACGTCCTTCACAGGGCGTCATGTGCCTTTCTATTTTCA TCTTAGAAAATTTCCTCAGCAAACCGATGAGAGATTGTGGTTGCAAGCTTCAGTATTTGCCTCGCTTCCCTTCCCTTTTCATATTTACAG AATTAAAACAACCTCAAGTACCTCAGACTCTGCATTCCAAACCAAGGCACCCAGCAGCCAAAGTGTCGAGGGCATTTAAGTGGCATTAAT GGCAGGAGAGATGGTTTTAGAATCTATGGAGTGGTGGAAGTTACGGATAGAAGGGAAAAGGCAAAAACTATTTACCCTGCCTTTGCAGGC TGGGGTTTTTGAACCGAGGAAGGCTGGGACGCCTGTTTCCAGATGGTTGTCATGGTCACGCTGGGCGAAGAGCTGGAGGGGAGTTGTCCC CTCAGCTGAGCGGCTGCGGTGAAATGCCCCAGTGTTCCTGGGTTGGCTTTACGGCAAACTAAATGCAGGGGACGCTGGAGTCCGACTCAC CTACACCGGCTTCCTCCCAGCCGCTGGTGTGCGGCACACACAACATCTGCATTAGGCAGAGGTGCAAGTGGGCTGATTGAACTTTTCCTT CAAAACCTGCTTGTCTGTCCTGGACCTTTGATGAAATGGGATCCCGGTCACGCAGGCTGAGACAGTGGGGACCGCCGAGGCCAGAGTGGG CTATGCTTGAGCAGGGATGAGAAGGGCCGCGGCAGCACGCAGCCTTGACCCACGCCTGCGTCTTGTGGTGCAAGGCCAGAGGGCTCTCTC TAGAACCTGACCGTGCACTCCATCTCCTGGGAGCCACTTTTGGCAAGAGTGAGTGTGGGGGGAAAAAGTGTGCACAAGAGATACGGAACC CTGAGCTAGGGTTTCCTGTCACCAAAGAGTGAGCTGCATTTCCAGTTCTGCGTTAAAGTATCGTTTGTTCTGGTGCCTGCCTGTGGTGGT GATTTGGAGACTCAAATTTCCTTTGCCAGGTCTCTTTTGTCTTTCTTTGGGATTGGTAGTATAGAAGATGCTGGGAATTGTCTTCCTCGC TCAGCCTCGGCTTCCCGCACTGTAAGATGAGGCAGTTGCAGAGGAGGCCTCGGACGTCCTGTGACCCTCGGCCCACACTCCCCCTTGGGT GGCCCTGGCAGGGCTGGCTAGGTGCGTTCCCTGCAGACCACGGGAAGCCCTGTGCTTGCCTGGGTCAGGGCTAAGCTGTGCGCCCTAGAG GAGGGAGGAGGACTGCAGATTCTTGGTCGAGAAGAATGAAGAGGATTTCTGTGTTTGCTGAGCAGCCATTGTGGAGGGTTACCCGCCTCC ACTTTCCCGTTGCCCATTTCACTGCCACCAGCTCCTCTTCCTCTGCTCGAACCTATGAGTCCCAGCCTCACTGGCGGCCTCAGACATGCT CAGGAGTGACGGGGACAGAGGGAGGCCGCTGAGTTGCCCGTTAGAACTCTTACTGCTGCGCCAGTGACCCAGGTGGAGAGGGACCCTGAA CCAAACAGAACGTGTGCTAATTTTCCGAACTCCAAACTGTACACTCATATTCATTTTTAAATTGTATTTTTCCAAACTTCAAAAAGGACG ATGAGCGTGGGGGATAGGAAACAAAACCTGTAAACGTTGTGAATGGGCTCAGTGGACTCTGGGACCAAACCTTCTGTAATCTCTAAAACA ATGGGACCAAGAGCTGGATGGAACCTGGAGTCAAAAAGAACTGCTTCAGTCCCCGCTGTACCGCCTGCCTAGCTGTGGGAGCAGGCAGGG CGCCTGGGAGCCTGCGTTTTCTGGACCGTTCCATGGGACTCATCCCTACCTCACAGGGCTGTTGTGAGGTGTTGTGTGACTGCGTGTCCT >In-frame_ENST00000379412_ENST00000288828_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(amino acids)=501AA_start in transcript=270_stop in transcript=1775 MGEPSGGYTYTQTSIFLFHAKIPFGSKSNMATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGE MMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLLIVSNPVDILTYVAWKIS GFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESTMIK GTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSMDGMFLSASSNTETVHIFKLETVKEKPPEEPTTWTGYFGKVLMASTSYLPSQVTEM FNQGRAFATVRLPFCGHKNICSLATIQKIPRLLVGAADGYLYMYNLDPQEGGECALMKQHRLDGSLETTNEILDSASHDCPLVTQTYGAA -------------------------------------------------------------- >In-frame_ENST00000379412_ENST00000401525_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(transcript)=2353nt_BP=1080nt TAAAAGCCGGGCGTTCGGAGGACCCAGCAATTAGTCTGATTTCCGCCCACCTTTCCGAGCGGGAAGGAGAGCCACAAAGCGCGCATGCGC GCGGATCACCGCAGGCTCCTGTGCCTTGGGCTTGAGCTTTGTGGCAGTTAATGGCTTTTCTGCACGTATCTCTGGTGTTTACTTGAGAAG CCTGGCTGTGTCCTTGCTGTAGGAGCCGGAGTAGCTCAGAGTGATCTTGTCTGAGGAAAGGCCAGCCCCACTTGGGGTTAATAAACCGCG ATGGGTGAACCCTCAGGAGGCTATACTTACACCCAAACGTCGATATTCCTTTTCCACGCTAAGATTCCTTTTGGTTCCAAGTCCAATATG GCAACTCTAAAGGATCAGCTGATTTATAATCTTCTAAAGGAAGAACAGACCCCCCAGAATAAGATTACAGTTGTTGGGGTTGGTGCTGTT GGCATGGCCTGTGCCATCAGTATCTTAATGAAGGACTTGGCAGATGAACTTGCTCTTGTTGATGTCATCGAAGACAAATTGAAGGGAGAG ATGATGGATCTCCAACATGGCAGCCTTTTCCTTAGAACACCAAAGATTGTCTCTGGCAAAGACTATAATGTAACTGCAAACTCCAAGCTG GTCATTATCACGGCTGGGGCACGTCAGCAAGAGGGAGAAAGCCGTCTTAATTTGGTCCAGCGTAACGTGAACATCTTTAAATTCATCATT CCTAATGTTGTAAAATACAGCCCGAACTGCAAGTTGCTTATTGTTTCAAATCCAGTGGATATCTTGACCTACGTGGCTTGGAAGATAAGT GGTTTTCCCAAAAACCGTGTTATTGGAAGCGGTTGCAATCTGGATTCAGCCCGATTCCGTTACCTAATGGGGGAAAGGCTGGGAGTTCAC CCATTAAGCTGTCATGGGTGGGTCCTTGGGGAACATGGAGATTCCAGTGTGCCTGTATGGAGTGGAATGAATGTTGCTGGTGTCTCTCTG AAGACTCTGCACCCAGATTTAGGGACTGATAAAGATAAGGAACAGTGGAAAGAGGTTCACAAGCAGGTGGTTGAGAGCACCATGATTAAG GGGACCGTGATTAGGGTATTTTCCATTCCAGAAGGACAAAAACTCTTTGAGTTTCGGAGAGGAGTAAAGAGGTGCGTGAGCATCTGCTCC CTGGCCTTCAGCATGGACGGCATGTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGCACATCTTCAAACTCGAGACTGTGAAAGAAAAA CCCCCAGAGGAGCCCACCACCTGGACCGGGTACTTCGGGAAAGTGCTCATGGCCTCCACCAGCTACCTGCCTTCCCAAGTGACAGAAATG TTCAACCAGGGCAGAGCCTTCGCCACGGTCCGCCTGCCATTCTGCGGCCACAAAAACATCTGCTCGCTAGCCACAATTCAGAAGATCCCG CGGTTGTTGGTGGGTGCCGCCGACGGGTACCTGTACATGTACAACCTGGACCCCCAGGAGGGCGGCGAGTGTGCCCTGATGAAGCAGCAC CGGCTGGACGGCAGTCTGGAAACGACCAATGAGATCTTGGACTCTGCCTCTCACGACTGCCCCTTAGTCACTCAGACATACGGCGCAGCT GCAGGAAAAGGTACTTACGTGCCTTCATCCCCAACGAGACTTGCCTACACAGACGACCTGGGTGCTGTGGGTGGCGCCTGCCTGGAGGAC GAGGCCAGCGCCCTGCGCCTGGATGAGGACAGCGAGCACCCGCCCATGATTCTTCGGACTGACTGAACTTGACCTGTGACCTCTGACCCG GGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCAGAGACTTT ATTAAAAAAAAAAAAAGATTGTAGTGGTAGTCTAACTCCATAACGCTGAGGAAATACATCATTTTCACTTCAGTGGCTTTTAAATCCTGC TTATGAATTTTAGCTTTTTGTTTGTTTGTTTTCTCTTTTTGCCAAAATTAACTGTTTGGTGAAGCCCGCAAAACCTCCTCGCTTTGCATG CATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTTCCAGCCACCTGCCGTTGGGTTTTTTCATATCTGTACATAATGCCGAG TGCGTAAGGAAACCGTGGCGTCGCGCACAGTGGGTCTGCTTGTCAAGGCCAGTTCTGCAGTGACAGGCCCAGGGGCTGCCCACCAGGTGT GCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGACCATTTTCCCTCCGTTTTATTTTGTTAATTAAATT >In-frame_ENST00000379412_ENST00000401525_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(amino acids)=501AA_start in transcript=270_stop in transcript=1775 MGEPSGGYTYTQTSIFLFHAKIPFGSKSNMATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGE MMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLLIVSNPVDILTYVAWKIS GFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESTMIK GTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSMDGMFLSASSNTETVHIFKLETVKEKPPEEPTTWTGYFGKVLMASTSYLPSQVTEM FNQGRAFATVRLPFCGHKNICSLATIQKIPRLLVGAADGYLYMYNLDPQEGGECALMKQHRLDGSLETTNEILDSASHDCPLVTQTYGAA -------------------------------------------------------------- >In-frame_ENST00000379412_ENST00000404704_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(transcript)=1900nt_BP=1080nt TAAAAGCCGGGCGTTCGGAGGACCCAGCAATTAGTCTGATTTCCGCCCACCTTTCCGAGCGGGAAGGAGAGCCACAAAGCGCGCATGCGC GCGGATCACCGCAGGCTCCTGTGCCTTGGGCTTGAGCTTTGTGGCAGTTAATGGCTTTTCTGCACGTATCTCTGGTGTTTACTTGAGAAG CCTGGCTGTGTCCTTGCTGTAGGAGCCGGAGTAGCTCAGAGTGATCTTGTCTGAGGAAAGGCCAGCCCCACTTGGGGTTAATAAACCGCG ATGGGTGAACCCTCAGGAGGCTATACTTACACCCAAACGTCGATATTCCTTTTCCACGCTAAGATTCCTTTTGGTTCCAAGTCCAATATG GCAACTCTAAAGGATCAGCTGATTTATAATCTTCTAAAGGAAGAACAGACCCCCCAGAATAAGATTACAGTTGTTGGGGTTGGTGCTGTT GGCATGGCCTGTGCCATCAGTATCTTAATGAAGGACTTGGCAGATGAACTTGCTCTTGTTGATGTCATCGAAGACAAATTGAAGGGAGAG ATGATGGATCTCCAACATGGCAGCCTTTTCCTTAGAACACCAAAGATTGTCTCTGGCAAAGACTATAATGTAACTGCAAACTCCAAGCTG GTCATTATCACGGCTGGGGCACGTCAGCAAGAGGGAGAAAGCCGTCTTAATTTGGTCCAGCGTAACGTGAACATCTTTAAATTCATCATT CCTAATGTTGTAAAATACAGCCCGAACTGCAAGTTGCTTATTGTTTCAAATCCAGTGGATATCTTGACCTACGTGGCTTGGAAGATAAGT GGTTTTCCCAAAAACCGTGTTATTGGAAGCGGTTGCAATCTGGATTCAGCCCGATTCCGTTACCTAATGGGGGAAAGGCTGGGAGTTCAC CCATTAAGCTGTCATGGGTGGGTCCTTGGGGAACATGGAGATTCCAGTGTGCCTGTATGGAGTGGAATGAATGTTGCTGGTGTCTCTCTG AAGACTCTGCACCCAGATTTAGGGACTGATAAAGATAAGGAACAGTGGAAAGAGGTTCACAAGCAGGTGGTTGAGAGCACCATGATTAAG GGGACCGTGATTAGGGTATTTTCCATTCCAGAAGGACAAAAACTCTTTGAGTTTCGGAGAGGAGTAAAGAGGTGCGTGAGCATCTGCTCC CTGGCCTTCAGCATGGACGGCATGTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGCACATCTTCAAACTCGAGACTGTGAAAGAAAAA CCCCCAGAGGAGCCCACCACCTGGACCGGGTACTTCGGGAAAGTGCTCATGGCCTCCACCAGCTACCTGCCTTCCCAAGTGACAGAAATG TTCAACCAGGGCAGAGCCTTCGCCACGGTCCGCCTGCCATTCTGCGGCCACAAAAACATCTGCTCGCTAGCCACAATTCAGAAGATCCCG CGGTTGTTGGTGGGTGCCGCCGACGGGTACCTGTACATGTACAACCTGGACCCCCAGGAGGGCGGCGAGTGTGCCCTGATGAAGCAGCAC CGGCTGGACGGCAGTCTGGAAACGACCAATGAGATCTTGGACTCTGCCTCTCACGACTGCCCCTTAGTCACTCAGACATACGGCGCAGCT GCAGGAAAAGCCTACACAGACGACCTGGGTGCTGTGGGTGGCGCCTGCCTGGAGGACGAGGCCAGCGCCCTGCGCCTGGATGAGGACAGC GAGCACCCGCCCATGATTCTTCGGACTGACTGAACTTGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTT TGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCAGAGACTTTATTAAAAAAAAAAAAAGATTGTAGTGGTAGTCT >In-frame_ENST00000379412_ENST00000404704_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(amino acids)=490AA_start in transcript=270_stop in transcript=1742 MGEPSGGYTYTQTSIFLFHAKIPFGSKSNMATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGE MMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLLIVSNPVDILTYVAWKIS GFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESTMIK GTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSMDGMFLSASSNTETVHIFKLETVKEKPPEEPTTWTGYFGKVLMASTSYLPSQVTEM FNQGRAFATVRLPFCGHKNICSLATIQKIPRLLVGAADGYLYMYNLDPQEGGECALMKQHRLDGSLETTNEILDSASHDCPLVTQTYGAA -------------------------------------------------------------- >In-frame_ENST00000542179_ENST00000288828_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(transcript)=4587nt_BP=1012nt GAACCCTCAGGAGGCTATACTTACACCCAAACGTCGATATTCCTTTTCCACGCTAAGGTATGGGCCTTCACTCTTCACAGACCCTGTCAT TAGGCCTTTCAACTCTCTTTTGGCAACCATTAGGTTTTTTCCCCTCCCTTTTTAGTCATCTCTAGTGATTTATAGTGGCAAATACCCCCA AAGGAAGTAAAATAGCTTAAAAAAATCTCTTGGTTAATAAACATTAAAGAAGCTGTAGTGACACTAAATGTTTTTCCTCCTATAGATTCC TTTTGGTTCCAAGTCCAATATGGCAACTCTAAAGGATCAGCTGATTTATAATCTTCTAAAGGAAGAACAGACCCCCCAGAATAAGATTAC AGTTGTTGGGGTTGGTGCTGTTGGCATGGCCTGTGCCATCAGTATCTTAATGAAGGACTTGGCAGATGAACTTGCTCTTGTTGATGTCAT CGAAGACAAATTGAAGGGAGAGATGATGGATCTCCAACATGGCAGCCTTTTCCTTAGAACACCAAAGATTGTCTCTGGCAAAGACTATAA TGTAACTGCAAACTCCAAGCTGGTCATTATCACGGCTGGGGCACGTCAGCAAGAGGGAGAAAGCCGTCTTAATTTGGTCCAGCGTAACGT GAACATCTTTAAATTCATCATTCCTAATGTTGTAAAATACAGCCCGAACTGCAAGTTGCTTATTGTTTCAAATCCAGTGGATATCTTGAC CTACGTGGCTTGGAAGATAAGTGGTTTTCCCAAAAACCGTGTTATTGGAAGCGGTTGCAATCTGGATTCAGCCCGATTCCGTTACCTAAT GGGGGAAAGGCTGGGAGTTCACCCATTAAGCTGTCATGGGTGGGTCCTTGGGGAACATGGAGATTCCAGTGTGCCTGTATGGAGTGGAAT GAATGTTGCTGGTGTCTCTCTGAAGACTCTGCACCCAGATTTAGGGACTGATAAAGATAAGGAACAGTGGAAAGAGGTTCACAAGCAGGT GGTTGAGAGCACCATGATTAAGGGGACCGTGATTAGGGTATTTTCCATTCCAGAAGGACAAAAACTCTTTGAGTTTCGGAGAGGAGTAAA GAGGTGCGTGAGCATCTGCTCCCTGGCCTTCAGCATGGACGGCATGTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGCACATCTTCAA ACTCGAGACTGTGAAAGAAAAACCCCCAGAGGAGCCCACCACCTGGACCGGGTACTTCGGGAAAGTGCTCATGGCCTCCACCAGCTACCT GCCTTCCCAAGTGACAGAAATGTTCAACCAGGGCAGAGCCTTCGCCACGGTCCGCCTGCCATTCTGCGGCCACAAAAACATCTGCTCGCT AGCCACAATTCAGAAGATCCCGCGGTTGTTGGTGGGTGCCGCCGACGGGTACCTGTACATGTACAACCTGGACCCCCAGGAGGGCGGCGA GTGTGCCCTGATGAAGCAGCACCGGCTGGACGGCAGTCTGGAAACGACCAATGAGATCTTGGACTCTGCCTCTCACGACTGCCCCTTAGT CACTCAGACATACGGCGCAGCTGCAGGAAAAGGTACTTACGTGCCTTCATCCCCAACGAGACTTGCCTACACAGACGACCTGGGTGCTGT GGGTGGCGCCTGCCTGGAGGACGAGGCCAGCGCCCTGCGCCTGGATGAGGACAGCGAGCACCCGCCCATGATTCTTCGGACTGACTGAAC TTGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGG GGGAGAGGATGGCAGAGACTTTATTAAAAAAAAAAAAAGATTGTAGTGGTAGTCTAACTCCATAACGCTGAGGAAATACATCATTTTCAC TTCAGTGGCTTTTAAATCCTGCTTATGAATTTTAGCTTTTTGTTTGTTTGTTTTCTCTTTTTGCCAAAATTAACTGTTTGGTGAAGCCCG CAAAACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTTCCAGCCACCTGCCGTTGGGTTTTTT CATATCTGTACATAATGCCGAGTGCGTAAGGAAACCGTGGCGTCGCGCACAGTGGGTCTGCTTGTCAAGGCCAGTTCTGCAGTGACAGGC CCAGGGGCTGCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGACCATTTTCCCTCC GTTTTATTTTGTTAATTAAATTCTTTCCAAATTGGATCGCTCTGGGATTTCTTCCATGGTGGACTTTTGTTTCTGATCTTGTTTTCCCTG TGGATATTGGAGGACAGCGAGGTTCTTTCTGATACTAAAAACCTTTCTTTCAGGCAGCAAATGAACTTGAAAGGTTGCCTGGACTCGCTG GAGCAAAGGAAAGCGATTTTGTTTGTATAATTAAATGATCTGTTCTTCTACTTCACTCTTCCTGTTGAAAAACTGTGTGATTTTTTTTTT TTTTTAAGTAAAGTTTGTAGCTCCTCCCATGCCCAGGAAAGCACAGAACTCAAGTGTGGTGGCCGTCTGAGCTGTCCTTTCGCTGGCCCC GCTGTCCGCAGGGGCTTCCTACCTGTGTGAGAGGTCGTAGCGGGAGACAGCAACAGAGAGTAGGCGGCTGGGCCACGTCCTTCACAGGGC GTCATGTGCCTTTCTATTTTCATCTTAGAAAATTTCCTCAGCAAACCGATGAGAGATTGTGGTTGCAAGCTTCAGTATTTGCCTCGCTTC CCTTCCCTTTTCATATTTACAGAATTAAAACAACCTCAAGTACCTCAGACTCTGCATTCCAAACCAAGGCACCCAGCAGCCAAAGTGTCG AGGGCATTTAAGTGGCATTAATGGCAGGAGAGATGGTTTTAGAATCTATGGAGTGGTGGAAGTTACGGATAGAAGGGAAAAGGCAAAAAC TATTTACCCTGCCTTTGCAGGCTGGGGTTTTTGAACCGAGGAAGGCTGGGACGCCTGTTTCCAGATGGTTGTCATGGTCACGCTGGGCGA AGAGCTGGAGGGGAGTTGTCCCCTCAGCTGAGCGGCTGCGGTGAAATGCCCCAGTGTTCCTGGGTTGGCTTTACGGCAAACTAAATGCAG GGGACGCTGGAGTCCGACTCACCTACACCGGCTTCCTCCCAGCCGCTGGTGTGCGGCACACACAACATCTGCATTAGGCAGAGGTGCAAG TGGGCTGATTGAACTTTTCCTTCAAAACCTGCTTGTCTGTCCTGGACCTTTGATGAAATGGGATCCCGGTCACGCAGGCTGAGACAGTGG GGACCGCCGAGGCCAGAGTGGGCTATGCTTGAGCAGGGATGAGAAGGGCCGCGGCAGCACGCAGCCTTGACCCACGCCTGCGTCTTGTGG TGCAAGGCCAGAGGGCTCTCTCTAGAACCTGACCGTGCACTCCATCTCCTGGGAGCCACTTTTGGCAAGAGTGAGTGTGGGGGGAAAAAG TGTGCACAAGAGATACGGAACCCTGAGCTAGGGTTTCCTGTCACCAAAGAGTGAGCTGCATTTCCAGTTCTGCGTTAAAGTATCGTTTGT TCTGGTGCCTGCCTGTGGTGGTGATTTGGAGACTCAAATTTCCTTTGCCAGGTCTCTTTTGTCTTTCTTTGGGATTGGTAGTATAGAAGA TGCTGGGAATTGTCTTCCTCGCTCAGCCTCGGCTTCCCGCACTGTAAGATGAGGCAGTTGCAGAGGAGGCCTCGGACGTCCTGTGACCCT CGGCCCACACTCCCCCTTGGGTGGCCCTGGCAGGGCTGGCTAGGTGCGTTCCCTGCAGACCACGGGAAGCCCTGTGCTTGCCTGGGTCAG GGCTAAGCTGTGCGCCCTAGAGGAGGGAGGAGGACTGCAGATTCTTGGTCGAGAAGAATGAAGAGGATTTCTGTGTTTGCTGAGCAGCCA TTGTGGAGGGTTACCCGCCTCCACTTTCCCGTTGCCCATTTCACTGCCACCAGCTCCTCTTCCTCTGCTCGAACCTATGAGTCCCAGCCT CACTGGCGGCCTCAGACATGCTCAGGAGTGACGGGGACAGAGGGAGGCCGCTGAGTTGCCCGTTAGAACTCTTACTGCTGCGCCAGTGAC CCAGGTGGAGAGGGACCCTGAACCAAACAGAACGTGTGCTAATTTTCCGAACTCCAAACTGTACACTCATATTCATTTTTAAATTGTATT TTTCCAAACTTCAAAAAGGACGATGAGCGTGGGGGATAGGAAACAAAACCTGTAAACGTTGTGAATGGGCTCAGTGGACTCTGGGACCAA ACCTTCTGTAATCTCTAAAACAATGGGACCAAGAGCTGGATGGAACCTGGAGTCAAAAAGAACTGCTTCAGTCCCCGCTGTACCGCCTGC CTAGCTGTGGGAGCAGGCAGGGCGCCTGGGAGCCTGCGTTTTCTGGACCGTTCCATGGGACTCATCCCTACCTCACAGGGCTGTTGTGAG >In-frame_ENST00000542179_ENST00000288828_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(amino acids)=472AA_start in transcript=289_stop in transcript=1707 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSK LVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV HPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESTMIKGTVIRVFSIPEGQKLFEFRRGVKRCVSIC SLAFSMDGMFLSASSNTETVHIFKLETVKEKPPEEPTTWTGYFGKVLMASTSYLPSQVTEMFNQGRAFATVRLPFCGHKNICSLATIQKI PRLLVGAADGYLYMYNLDPQEGGECALMKQHRLDGSLETTNEILDSASHDCPLVTQTYGAAAGKGTYVPSSPTRLAYTDDLGAVGGACLE -------------------------------------------------------------- >In-frame_ENST00000542179_ENST00000401525_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(transcript)=2285nt_BP=1012nt GAACCCTCAGGAGGCTATACTTACACCCAAACGTCGATATTCCTTTTCCACGCTAAGGTATGGGCCTTCACTCTTCACAGACCCTGTCAT TAGGCCTTTCAACTCTCTTTTGGCAACCATTAGGTTTTTTCCCCTCCCTTTTTAGTCATCTCTAGTGATTTATAGTGGCAAATACCCCCA AAGGAAGTAAAATAGCTTAAAAAAATCTCTTGGTTAATAAACATTAAAGAAGCTGTAGTGACACTAAATGTTTTTCCTCCTATAGATTCC TTTTGGTTCCAAGTCCAATATGGCAACTCTAAAGGATCAGCTGATTTATAATCTTCTAAAGGAAGAACAGACCCCCCAGAATAAGATTAC AGTTGTTGGGGTTGGTGCTGTTGGCATGGCCTGTGCCATCAGTATCTTAATGAAGGACTTGGCAGATGAACTTGCTCTTGTTGATGTCAT CGAAGACAAATTGAAGGGAGAGATGATGGATCTCCAACATGGCAGCCTTTTCCTTAGAACACCAAAGATTGTCTCTGGCAAAGACTATAA TGTAACTGCAAACTCCAAGCTGGTCATTATCACGGCTGGGGCACGTCAGCAAGAGGGAGAAAGCCGTCTTAATTTGGTCCAGCGTAACGT GAACATCTTTAAATTCATCATTCCTAATGTTGTAAAATACAGCCCGAACTGCAAGTTGCTTATTGTTTCAAATCCAGTGGATATCTTGAC CTACGTGGCTTGGAAGATAAGTGGTTTTCCCAAAAACCGTGTTATTGGAAGCGGTTGCAATCTGGATTCAGCCCGATTCCGTTACCTAAT GGGGGAAAGGCTGGGAGTTCACCCATTAAGCTGTCATGGGTGGGTCCTTGGGGAACATGGAGATTCCAGTGTGCCTGTATGGAGTGGAAT GAATGTTGCTGGTGTCTCTCTGAAGACTCTGCACCCAGATTTAGGGACTGATAAAGATAAGGAACAGTGGAAAGAGGTTCACAAGCAGGT GGTTGAGAGCACCATGATTAAGGGGACCGTGATTAGGGTATTTTCCATTCCAGAAGGACAAAAACTCTTTGAGTTTCGGAGAGGAGTAAA GAGGTGCGTGAGCATCTGCTCCCTGGCCTTCAGCATGGACGGCATGTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGCACATCTTCAA ACTCGAGACTGTGAAAGAAAAACCCCCAGAGGAGCCCACCACCTGGACCGGGTACTTCGGGAAAGTGCTCATGGCCTCCACCAGCTACCT GCCTTCCCAAGTGACAGAAATGTTCAACCAGGGCAGAGCCTTCGCCACGGTCCGCCTGCCATTCTGCGGCCACAAAAACATCTGCTCGCT AGCCACAATTCAGAAGATCCCGCGGTTGTTGGTGGGTGCCGCCGACGGGTACCTGTACATGTACAACCTGGACCCCCAGGAGGGCGGCGA GTGTGCCCTGATGAAGCAGCACCGGCTGGACGGCAGTCTGGAAACGACCAATGAGATCTTGGACTCTGCCTCTCACGACTGCCCCTTAGT CACTCAGACATACGGCGCAGCTGCAGGAAAAGGTACTTACGTGCCTTCATCCCCAACGAGACTTGCCTACACAGACGACCTGGGTGCTGT GGGTGGCGCCTGCCTGGAGGACGAGGCCAGCGCCCTGCGCCTGGATGAGGACAGCGAGCACCCGCCCATGATTCTTCGGACTGACTGAAC TTGACCTGTGACCTCTGACCCGGGGAGCAGAGAACACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGG GGGAGAGGATGGCAGAGACTTTATTAAAAAAAAAAAAAGATTGTAGTGGTAGTCTAACTCCATAACGCTGAGGAAATACATCATTTTCAC TTCAGTGGCTTTTAAATCCTGCTTATGAATTTTAGCTTTTTGTTTGTTTGTTTTCTCTTTTTGCCAAAATTAACTGTTTGGTGAAGCCCG CAAAACCTCCTCGCTTTGCATGCATGAACGTGCCAAGCCAGCATAGGGGAGCTAGAAGCCACTTTCCAGCCACCTGCCGTTGGGTTTTTT CATATCTGTACATAATGCCGAGTGCGTAAGGAAACCGTGGCGTCGCGCACAGTGGGTCTGCTTGTCAAGGCCAGTTCTGCAGTGACAGGC CCAGGGGCTGCCCACCAGGTGTGCTGGGCAGACTTCAGCTGGGACAGAAGTCCGATCTCCCTAGGGCCCCACCTGGACCATTTTCCCTCC >In-frame_ENST00000542179_ENST00000401525_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(amino acids)=472AA_start in transcript=289_stop in transcript=1707 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSK LVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV HPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESTMIKGTVIRVFSIPEGQKLFEFRRGVKRCVSIC SLAFSMDGMFLSASSNTETVHIFKLETVKEKPPEEPTTWTGYFGKVLMASTSYLPSQVTEMFNQGRAFATVRLPFCGHKNICSLATIQKI PRLLVGAADGYLYMYNLDPQEGGECALMKQHRLDGSLETTNEILDSASHDCPLVTQTYGAAAGKGTYVPSSPTRLAYTDDLGAVGGACLE -------------------------------------------------------------- >In-frame_ENST00000542179_ENST00000404704_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(transcript)=1832nt_BP=1012nt GAACCCTCAGGAGGCTATACTTACACCCAAACGTCGATATTCCTTTTCCACGCTAAGGTATGGGCCTTCACTCTTCACAGACCCTGTCAT TAGGCCTTTCAACTCTCTTTTGGCAACCATTAGGTTTTTTCCCCTCCCTTTTTAGTCATCTCTAGTGATTTATAGTGGCAAATACCCCCA AAGGAAGTAAAATAGCTTAAAAAAATCTCTTGGTTAATAAACATTAAAGAAGCTGTAGTGACACTAAATGTTTTTCCTCCTATAGATTCC TTTTGGTTCCAAGTCCAATATGGCAACTCTAAAGGATCAGCTGATTTATAATCTTCTAAAGGAAGAACAGACCCCCCAGAATAAGATTAC AGTTGTTGGGGTTGGTGCTGTTGGCATGGCCTGTGCCATCAGTATCTTAATGAAGGACTTGGCAGATGAACTTGCTCTTGTTGATGTCAT CGAAGACAAATTGAAGGGAGAGATGATGGATCTCCAACATGGCAGCCTTTTCCTTAGAACACCAAAGATTGTCTCTGGCAAAGACTATAA TGTAACTGCAAACTCCAAGCTGGTCATTATCACGGCTGGGGCACGTCAGCAAGAGGGAGAAAGCCGTCTTAATTTGGTCCAGCGTAACGT GAACATCTTTAAATTCATCATTCCTAATGTTGTAAAATACAGCCCGAACTGCAAGTTGCTTATTGTTTCAAATCCAGTGGATATCTTGAC CTACGTGGCTTGGAAGATAAGTGGTTTTCCCAAAAACCGTGTTATTGGAAGCGGTTGCAATCTGGATTCAGCCCGATTCCGTTACCTAAT GGGGGAAAGGCTGGGAGTTCACCCATTAAGCTGTCATGGGTGGGTCCTTGGGGAACATGGAGATTCCAGTGTGCCTGTATGGAGTGGAAT GAATGTTGCTGGTGTCTCTCTGAAGACTCTGCACCCAGATTTAGGGACTGATAAAGATAAGGAACAGTGGAAAGAGGTTCACAAGCAGGT GGTTGAGAGCACCATGATTAAGGGGACCGTGATTAGGGTATTTTCCATTCCAGAAGGACAAAAACTCTTTGAGTTTCGGAGAGGAGTAAA GAGGTGCGTGAGCATCTGCTCCCTGGCCTTCAGCATGGACGGCATGTTCCTCTCCGCCTCCAGCAACACTGAGACCGTGCACATCTTCAA ACTCGAGACTGTGAAAGAAAAACCCCCAGAGGAGCCCACCACCTGGACCGGGTACTTCGGGAAAGTGCTCATGGCCTCCACCAGCTACCT GCCTTCCCAAGTGACAGAAATGTTCAACCAGGGCAGAGCCTTCGCCACGGTCCGCCTGCCATTCTGCGGCCACAAAAACATCTGCTCGCT AGCCACAATTCAGAAGATCCCGCGGTTGTTGGTGGGTGCCGCCGACGGGTACCTGTACATGTACAACCTGGACCCCCAGGAGGGCGGCGA GTGTGCCCTGATGAAGCAGCACCGGCTGGACGGCAGTCTGGAAACGACCAATGAGATCTTGGACTCTGCCTCTCACGACTGCCCCTTAGT CACTCAGACATACGGCGCAGCTGCAGGAAAAGCCTACACAGACGACCTGGGTGCTGTGGGTGGCGCCTGCCTGGAGGACGAGGCCAGCGC CCTGCGCCTGGATGAGGACAGCGAGCACCCGCCCATGATTCTTCGGACTGACTGAACTTGACCTGTGACCTCTGACCCGGGGAGCAGAGA ACACTGGCTTCACAGAGGACTTTGTGCATTGCTGCTATGAACTTTGACCTGAGTCGGGGGAGAGGATGGCAGAGACTTTATTAAAAAAAA >In-frame_ENST00000542179_ENST00000404704_BG775162_LDHA_chr11_18427106_+_WIPI2_chr7_5262235_length(amino acids)=461AA_start in transcript=289_stop in transcript=1674 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSK LVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV HPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESTMIKGTVIRVFSIPEGQKLFEFRRGVKRCVSIC SLAFSMDGMFLSASSNTETVHIFKLETVKEKPPEEPTTWTGYFGKVLMASTSYLPSQVTEMFNQGRAFATVRLPFCGHKNICSLATIQKI PRLLVGAADGYLYMYNLDPQEGGECALMKQHRLDGSLETTNEILDSASHDCPLVTQTYGAAAGKAYTDDLGAVGGACLEDEASALRLDED -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for LDHA-WIPI2 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for LDHA-WIPI2 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Hgene | LDHA | P00338 | DB09118 | Stiripentol | Inhibitor | Small molecule | Approved |
Hgene | LDHA | P00338 | DB09118 | Stiripentol | Inhibitor | Small molecule | Approved |
Hgene | LDHA | P00338 | DB02701 | Nicotinamide | Small molecule | Approved|Investigational | |
Hgene | LDHA | P00338 | DB02701 | Nicotinamide | Small molecule | Approved|Investigational | |
Hgene | LDHA | P00338 | DB09130 | Copper | Small molecule | Approved|Investigational | |
Hgene | LDHA | P00338 | DB09130 | Copper | Small molecule | Approved|Investigational | |
Hgene | LDHA | P00338 | DB00157 | NADH | Small molecule | Approved|Nutraceutical | |
Hgene | LDHA | P00338 | DB00157 | NADH | Small molecule | Approved|Nutraceutical |
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Related Diseases for LDHA-WIPI2 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | LDHA | C2931743 | Lactate dehydrogenase deficiency type A | 3 | CTD_human;GENOMICS_ENGLAND;ORPHANET |
Hgene | LDHA | C0017919 | Glycogen Storage Disease | 2 | GENOMICS_ENGLAND |
Hgene | LDHA | C0005586 | Bipolar Disorder | 1 | PSYGENET |
Hgene | LDHA | C0011570 | Mental Depression | 1 | PSYGENET |
Hgene | LDHA | C0027051 | Myocardial Infarction | 1 | CTD_human |
Hgene | LDHA | C0027080 | Myoglobinuria | 1 | CTD_human |
Hgene | LDHA | C0030297 | Pancreatic Neoplasm | 1 | CTD_human |
Hgene | LDHA | C0033141 | Cardiomyopathies, Primary | 1 | CTD_human |
Hgene | LDHA | C0036529 | Myocardial Diseases, Secondary | 1 | CTD_human |
Hgene | LDHA | C0041696 | Unipolar Depression | 1 | PSYGENET |
Hgene | LDHA | C0152013 | Adenocarcinoma of lung (disorder) | 1 | CTD_human |
Hgene | LDHA | C0346647 | Malignant neoplasm of pancreas | 1 | CTD_human |
Hgene | LDHA | C0525045 | Mood Disorders | 1 | PSYGENET |
Hgene | LDHA | C0878544 | Cardiomyopathies | 1 | CTD_human |
Hgene | LDHA | C1269683 | Major Depressive Disorder | 1 | PSYGENET |