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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:LIMK2-CDC45 (FusionGDB2 ID:44476) |
Fusion Gene Summary for LIMK2-CDC45 |
Fusion gene summary |
Fusion gene information | Fusion gene name: LIMK2-CDC45 | Fusion gene ID: 44476 | Hgene | Tgene | Gene symbol | LIMK2 | CDC45 | Gene ID | 3985 | 8318 |
Gene name | LIM domain kinase 2 | cell division cycle 45 | |
Synonyms | - | CDC45L|CDC45L2|MGORS7|PORC-PI-1 | |
Cytomap | 22q12.2 | 22q11.21 | |
Type of gene | protein-coding | protein-coding | |
Description | LIM domain kinase 2 | cell division control protein 45 homologCDC45 cell division cycle 45 homologCDC45 cell division cycle 45-likeCDC45-related proteincell division cycle 45 homologcell division cycle 45-like 2human CDC45 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | O75419 | |
Ensembl transtripts involved in fusion gene | ENST00000406516, ENST00000444929, ENST00000331728, ENST00000333611, ENST00000340552, ENST00000467301, | ENST00000407835, ENST00000437685, ENST00000263201, ENST00000483431, ENST00000404724, | |
Fusion gene scores | * DoF score | 11 X 7 X 7=539 | 3 X 4 X 3=36 |
# samples | 13 | 5 | |
** MAII score | log2(13/539*10)=-2.05177364972405 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(5/36*10)=0.473931188332412 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: LIMK2 [Title/Abstract] AND CDC45 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | LIMK2(31664186)-CDC45(19504050), # samples:3 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | LIMK2 | GO:0006468 | protein phosphorylation | 22328514 |
Hgene | LIMK2 | GO:0030953 | astral microtubule organization | 22328514 |
Fusion gene breakpoints across LIMK2 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across CDC45 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | BLCA | TCGA-DK-A3IN-01A | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
ChimerDB4 | BLCA | TCGA-DK-A3IN | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
ChimerDB4 | BLCA | TCGA-DK-A3IN-01A | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
ChimerDB4 | BLCA | TCGA-DK-A3IN-01A | LIMK2 | chr22 | 31664186 | - | CDC45 | chr22 | 19504050 | + |
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Fusion Gene ORF analysis for LIMK2-CDC45 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000406516 | ENST00000407835 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
In-frame | ENST00000406516 | ENST00000437685 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
In-frame | ENST00000406516 | ENST00000263201 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
5CDS-intron | ENST00000406516 | ENST00000483431 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
5CDS-intron | ENST00000406516 | ENST00000404724 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
In-frame | ENST00000444929 | ENST00000407835 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
In-frame | ENST00000444929 | ENST00000437685 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
In-frame | ENST00000444929 | ENST00000263201 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
5CDS-intron | ENST00000444929 | ENST00000483431 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
5CDS-intron | ENST00000444929 | ENST00000404724 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
In-frame | ENST00000331728 | ENST00000407835 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
In-frame | ENST00000331728 | ENST00000437685 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
In-frame | ENST00000331728 | ENST00000263201 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
5CDS-intron | ENST00000331728 | ENST00000483431 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
5CDS-intron | ENST00000331728 | ENST00000404724 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
In-frame | ENST00000333611 | ENST00000407835 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
In-frame | ENST00000333611 | ENST00000437685 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
In-frame | ENST00000333611 | ENST00000263201 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
5CDS-intron | ENST00000333611 | ENST00000483431 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
5CDS-intron | ENST00000333611 | ENST00000404724 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
In-frame | ENST00000340552 | ENST00000407835 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
In-frame | ENST00000340552 | ENST00000437685 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
In-frame | ENST00000340552 | ENST00000263201 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
5CDS-intron | ENST00000340552 | ENST00000483431 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
5CDS-intron | ENST00000340552 | ENST00000404724 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
intron-3CDS | ENST00000467301 | ENST00000407835 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
intron-3CDS | ENST00000467301 | ENST00000437685 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
intron-3CDS | ENST00000467301 | ENST00000263201 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
intron-intron | ENST00000467301 | ENST00000483431 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
intron-intron | ENST00000467301 | ENST00000404724 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + |
In-frame | ENST00000406516 | ENST00000407835 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
In-frame | ENST00000406516 | ENST00000437685 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
In-frame | ENST00000406516 | ENST00000263201 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
5CDS-intron | ENST00000406516 | ENST00000483431 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
5CDS-intron | ENST00000406516 | ENST00000404724 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
In-frame | ENST00000444929 | ENST00000407835 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
In-frame | ENST00000444929 | ENST00000437685 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
In-frame | ENST00000444929 | ENST00000263201 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
5CDS-intron | ENST00000444929 | ENST00000483431 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
5CDS-intron | ENST00000444929 | ENST00000404724 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
In-frame | ENST00000331728 | ENST00000407835 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
In-frame | ENST00000331728 | ENST00000437685 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
In-frame | ENST00000331728 | ENST00000263201 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
5CDS-intron | ENST00000331728 | ENST00000483431 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
5CDS-intron | ENST00000331728 | ENST00000404724 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
In-frame | ENST00000333611 | ENST00000407835 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
In-frame | ENST00000333611 | ENST00000437685 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
In-frame | ENST00000333611 | ENST00000263201 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
5CDS-intron | ENST00000333611 | ENST00000483431 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
5CDS-intron | ENST00000333611 | ENST00000404724 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
In-frame | ENST00000340552 | ENST00000407835 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
In-frame | ENST00000340552 | ENST00000437685 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
In-frame | ENST00000340552 | ENST00000263201 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
5CDS-intron | ENST00000340552 | ENST00000483431 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
5CDS-intron | ENST00000340552 | ENST00000404724 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
intron-3CDS | ENST00000467301 | ENST00000407835 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
intron-3CDS | ENST00000467301 | ENST00000437685 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
intron-3CDS | ENST00000467301 | ENST00000263201 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
intron-intron | ENST00000467301 | ENST00000483431 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
intron-intron | ENST00000467301 | ENST00000404724 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000406516 | LIMK2 | chr22 | 31664186 | + | ENST00000407835 | CDC45 | chr22 | 19504050 | + | 1746 | 1352 | 77 | 1612 | 511 |
ENST00000406516 | LIMK2 | chr22 | 31664186 | + | ENST00000437685 | CDC45 | chr22 | 19504050 | + | 1745 | 1352 | 77 | 1612 | 511 |
ENST00000406516 | LIMK2 | chr22 | 31664186 | + | ENST00000263201 | CDC45 | chr22 | 19504050 | + | 1745 | 1352 | 77 | 1612 | 511 |
ENST00000444929 | LIMK2 | chr22 | 31664186 | + | ENST00000407835 | CDC45 | chr22 | 19504050 | + | 1103 | 709 | 82 | 969 | 295 |
ENST00000444929 | LIMK2 | chr22 | 31664186 | + | ENST00000437685 | CDC45 | chr22 | 19504050 | + | 1102 | 709 | 82 | 969 | 295 |
ENST00000444929 | LIMK2 | chr22 | 31664186 | + | ENST00000263201 | CDC45 | chr22 | 19504050 | + | 1102 | 709 | 82 | 969 | 295 |
ENST00000331728 | LIMK2 | chr22 | 31664186 | + | ENST00000407835 | CDC45 | chr22 | 19504050 | + | 1825 | 1431 | 66 | 1691 | 541 |
ENST00000331728 | LIMK2 | chr22 | 31664186 | + | ENST00000437685 | CDC45 | chr22 | 19504050 | + | 1824 | 1431 | 66 | 1691 | 541 |
ENST00000331728 | LIMK2 | chr22 | 31664186 | + | ENST00000263201 | CDC45 | chr22 | 19504050 | + | 1824 | 1431 | 66 | 1691 | 541 |
ENST00000333611 | LIMK2 | chr22 | 31664186 | + | ENST00000407835 | CDC45 | chr22 | 19504050 | + | 1963 | 1569 | 141 | 1829 | 562 |
ENST00000333611 | LIMK2 | chr22 | 31664186 | + | ENST00000437685 | CDC45 | chr22 | 19504050 | + | 1962 | 1569 | 141 | 1829 | 562 |
ENST00000333611 | LIMK2 | chr22 | 31664186 | + | ENST00000263201 | CDC45 | chr22 | 19504050 | + | 1962 | 1569 | 141 | 1829 | 562 |
ENST00000340552 | LIMK2 | chr22 | 31664186 | + | ENST00000407835 | CDC45 | chr22 | 19504050 | + | 1878 | 1484 | 56 | 1744 | 562 |
ENST00000340552 | LIMK2 | chr22 | 31664186 | + | ENST00000437685 | CDC45 | chr22 | 19504050 | + | 1877 | 1484 | 56 | 1744 | 562 |
ENST00000340552 | LIMK2 | chr22 | 31664186 | + | ENST00000263201 | CDC45 | chr22 | 19504050 | + | 1877 | 1484 | 56 | 1744 | 562 |
ENST00000406516 | LIMK2 | chr22 | 31664186 | + | ENST00000407835 | CDC45 | chr22 | 19504049 | + | 1746 | 1352 | 77 | 1612 | 511 |
ENST00000406516 | LIMK2 | chr22 | 31664186 | + | ENST00000437685 | CDC45 | chr22 | 19504049 | + | 1745 | 1352 | 77 | 1612 | 511 |
ENST00000406516 | LIMK2 | chr22 | 31664186 | + | ENST00000263201 | CDC45 | chr22 | 19504049 | + | 1745 | 1352 | 77 | 1612 | 511 |
ENST00000444929 | LIMK2 | chr22 | 31664186 | + | ENST00000407835 | CDC45 | chr22 | 19504049 | + | 1103 | 709 | 82 | 969 | 295 |
ENST00000444929 | LIMK2 | chr22 | 31664186 | + | ENST00000437685 | CDC45 | chr22 | 19504049 | + | 1102 | 709 | 82 | 969 | 295 |
ENST00000444929 | LIMK2 | chr22 | 31664186 | + | ENST00000263201 | CDC45 | chr22 | 19504049 | + | 1102 | 709 | 82 | 969 | 295 |
ENST00000331728 | LIMK2 | chr22 | 31664186 | + | ENST00000407835 | CDC45 | chr22 | 19504049 | + | 1825 | 1431 | 66 | 1691 | 541 |
ENST00000331728 | LIMK2 | chr22 | 31664186 | + | ENST00000437685 | CDC45 | chr22 | 19504049 | + | 1824 | 1431 | 66 | 1691 | 541 |
ENST00000331728 | LIMK2 | chr22 | 31664186 | + | ENST00000263201 | CDC45 | chr22 | 19504049 | + | 1824 | 1431 | 66 | 1691 | 541 |
ENST00000333611 | LIMK2 | chr22 | 31664186 | + | ENST00000407835 | CDC45 | chr22 | 19504049 | + | 1963 | 1569 | 141 | 1829 | 562 |
ENST00000333611 | LIMK2 | chr22 | 31664186 | + | ENST00000437685 | CDC45 | chr22 | 19504049 | + | 1962 | 1569 | 141 | 1829 | 562 |
ENST00000333611 | LIMK2 | chr22 | 31664186 | + | ENST00000263201 | CDC45 | chr22 | 19504049 | + | 1962 | 1569 | 141 | 1829 | 562 |
ENST00000340552 | LIMK2 | chr22 | 31664186 | + | ENST00000407835 | CDC45 | chr22 | 19504049 | + | 1878 | 1484 | 56 | 1744 | 562 |
ENST00000340552 | LIMK2 | chr22 | 31664186 | + | ENST00000437685 | CDC45 | chr22 | 19504049 | + | 1877 | 1484 | 56 | 1744 | 562 |
ENST00000340552 | LIMK2 | chr22 | 31664186 | + | ENST00000263201 | CDC45 | chr22 | 19504049 | + | 1877 | 1484 | 56 | 1744 | 562 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000406516 | ENST00000407835 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + | 0.010163481 | 0.9898365 |
ENST00000406516 | ENST00000437685 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + | 0.010357936 | 0.9896421 |
ENST00000406516 | ENST00000263201 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + | 0.010357936 | 0.9896421 |
ENST00000444929 | ENST00000407835 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + | 0.02987963 | 0.97012043 |
ENST00000444929 | ENST00000437685 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + | 0.030441845 | 0.9695581 |
ENST00000444929 | ENST00000263201 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + | 0.030441845 | 0.9695581 |
ENST00000331728 | ENST00000407835 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + | 0.010359105 | 0.9896409 |
ENST00000331728 | ENST00000437685 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + | 0.010571082 | 0.98942894 |
ENST00000331728 | ENST00000263201 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + | 0.010571082 | 0.98942894 |
ENST00000333611 | ENST00000407835 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + | 0.01366686 | 0.9863332 |
ENST00000333611 | ENST00000437685 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + | 0.013907251 | 0.98609275 |
ENST00000333611 | ENST00000263201 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + | 0.013907251 | 0.98609275 |
ENST00000340552 | ENST00000407835 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + | 0.013779079 | 0.98622096 |
ENST00000340552 | ENST00000437685 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + | 0.014022199 | 0.98597777 |
ENST00000340552 | ENST00000263201 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504050 | + | 0.014022199 | 0.98597777 |
ENST00000406516 | ENST00000407835 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + | 0.010163481 | 0.9898365 |
ENST00000406516 | ENST00000437685 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + | 0.010357936 | 0.9896421 |
ENST00000406516 | ENST00000263201 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + | 0.010357936 | 0.9896421 |
ENST00000444929 | ENST00000407835 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + | 0.02987963 | 0.97012043 |
ENST00000444929 | ENST00000437685 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + | 0.030441845 | 0.9695581 |
ENST00000444929 | ENST00000263201 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + | 0.030441845 | 0.9695581 |
ENST00000331728 | ENST00000407835 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + | 0.010359105 | 0.9896409 |
ENST00000331728 | ENST00000437685 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + | 0.010571082 | 0.98942894 |
ENST00000331728 | ENST00000263201 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + | 0.010571082 | 0.98942894 |
ENST00000333611 | ENST00000407835 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + | 0.01366686 | 0.9863332 |
ENST00000333611 | ENST00000437685 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + | 0.013907251 | 0.98609275 |
ENST00000333611 | ENST00000263201 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + | 0.013907251 | 0.98609275 |
ENST00000340552 | ENST00000407835 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + | 0.013779079 | 0.98622096 |
ENST00000340552 | ENST00000437685 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + | 0.014022199 | 0.98597777 |
ENST00000340552 | ENST00000263201 | LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + | 0.014022199 | 0.98597777 |
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Fusion Genomic Features for LIMK2-CDC45 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + | 8.45E-07 | 0.99999917 |
LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + | 8.45E-07 | 0.99999917 |
LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + | 8.45E-07 | 0.99999917 |
LIMK2 | chr22 | 31664186 | + | CDC45 | chr22 | 19504049 | + | 8.45E-07 | 0.99999917 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for LIMK2-CDC45 |
Go to FGviewer for the breakpoints of chr22:31664186-chr22:19504050 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | CDC45 |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Required for initiation of chromosomal DNA replication. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | LIMK2 | chr22:31664186 | chr22:19504049 | ENST00000331728 | + | 11 | 16 | 12_63 | 439.0 | 639.0 | Domain | LIM zinc-binding 1 |
Hgene | LIMK2 | chr22:31664186 | chr22:19504049 | ENST00000331728 | + | 11 | 16 | 152_239 | 439.0 | 639.0 | Domain | PDZ |
Hgene | LIMK2 | chr22:31664186 | chr22:19504049 | ENST00000331728 | + | 11 | 16 | 72_124 | 439.0 | 639.0 | Domain | LIM zinc-binding 2 |
Hgene | LIMK2 | chr22:31664186 | chr22:19504049 | ENST00000333611 | + | 10 | 15 | 12_63 | 418.0 | 618.0 | Domain | LIM zinc-binding 1 |
Hgene | LIMK2 | chr22:31664186 | chr22:19504049 | ENST00000333611 | + | 10 | 15 | 152_239 | 418.0 | 618.0 | Domain | PDZ |
Hgene | LIMK2 | chr22:31664186 | chr22:19504049 | ENST00000333611 | + | 10 | 15 | 72_124 | 418.0 | 618.0 | Domain | LIM zinc-binding 2 |
Hgene | LIMK2 | chr22:31664186 | chr22:19504049 | ENST00000340552 | + | 10 | 15 | 12_63 | 418.0 | 687.0 | Domain | LIM zinc-binding 1 |
Hgene | LIMK2 | chr22:31664186 | chr22:19504049 | ENST00000340552 | + | 10 | 15 | 152_239 | 418.0 | 687.0 | Domain | PDZ |
Hgene | LIMK2 | chr22:31664186 | chr22:19504049 | ENST00000340552 | + | 10 | 15 | 72_124 | 418.0 | 687.0 | Domain | LIM zinc-binding 2 |
Hgene | LIMK2 | chr22:31664186 | chr22:19504050 | ENST00000331728 | + | 11 | 16 | 12_63 | 439.0 | 639.0 | Domain | LIM zinc-binding 1 |
Hgene | LIMK2 | chr22:31664186 | chr22:19504050 | ENST00000331728 | + | 11 | 16 | 152_239 | 439.0 | 639.0 | Domain | PDZ |
Hgene | LIMK2 | chr22:31664186 | chr22:19504050 | ENST00000331728 | + | 11 | 16 | 72_124 | 439.0 | 639.0 | Domain | LIM zinc-binding 2 |
Hgene | LIMK2 | chr22:31664186 | chr22:19504050 | ENST00000333611 | + | 10 | 15 | 12_63 | 418.0 | 618.0 | Domain | LIM zinc-binding 1 |
Hgene | LIMK2 | chr22:31664186 | chr22:19504050 | ENST00000333611 | + | 10 | 15 | 152_239 | 418.0 | 618.0 | Domain | PDZ |
Hgene | LIMK2 | chr22:31664186 | chr22:19504050 | ENST00000333611 | + | 10 | 15 | 72_124 | 418.0 | 618.0 | Domain | LIM zinc-binding 2 |
Hgene | LIMK2 | chr22:31664186 | chr22:19504050 | ENST00000340552 | + | 10 | 15 | 12_63 | 418.0 | 687.0 | Domain | LIM zinc-binding 1 |
Hgene | LIMK2 | chr22:31664186 | chr22:19504050 | ENST00000340552 | + | 10 | 15 | 152_239 | 418.0 | 687.0 | Domain | PDZ |
Hgene | LIMK2 | chr22:31664186 | chr22:19504050 | ENST00000340552 | + | 10 | 15 | 72_124 | 418.0 | 687.0 | Domain | LIM zinc-binding 2 |
Hgene | LIMK2 | chr22:31664186 | chr22:19504049 | ENST00000331728 | + | 11 | 16 | 337_345 | 439.0 | 639.0 | Nucleotide binding | ATP |
Hgene | LIMK2 | chr22:31664186 | chr22:19504049 | ENST00000333611 | + | 10 | 15 | 337_345 | 418.0 | 618.0 | Nucleotide binding | ATP |
Hgene | LIMK2 | chr22:31664186 | chr22:19504049 | ENST00000340552 | + | 10 | 15 | 337_345 | 418.0 | 687.0 | Nucleotide binding | ATP |
Hgene | LIMK2 | chr22:31664186 | chr22:19504050 | ENST00000331728 | + | 11 | 16 | 337_345 | 439.0 | 639.0 | Nucleotide binding | ATP |
Hgene | LIMK2 | chr22:31664186 | chr22:19504050 | ENST00000333611 | + | 10 | 15 | 337_345 | 418.0 | 618.0 | Nucleotide binding | ATP |
Hgene | LIMK2 | chr22:31664186 | chr22:19504050 | ENST00000340552 | + | 10 | 15 | 337_345 | 418.0 | 687.0 | Nucleotide binding | ATP |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | LIMK2 | chr22:31664186 | chr22:19504049 | ENST00000331728 | + | 11 | 16 | 331_608 | 439.0 | 639.0 | Domain | Protein kinase |
Hgene | LIMK2 | chr22:31664186 | chr22:19504049 | ENST00000333611 | + | 10 | 15 | 331_608 | 418.0 | 618.0 | Domain | Protein kinase |
Hgene | LIMK2 | chr22:31664186 | chr22:19504049 | ENST00000340552 | + | 10 | 15 | 331_608 | 418.0 | 687.0 | Domain | Protein kinase |
Hgene | LIMK2 | chr22:31664186 | chr22:19504050 | ENST00000331728 | + | 11 | 16 | 331_608 | 439.0 | 639.0 | Domain | Protein kinase |
Hgene | LIMK2 | chr22:31664186 | chr22:19504050 | ENST00000333611 | + | 10 | 15 | 331_608 | 418.0 | 618.0 | Domain | Protein kinase |
Hgene | LIMK2 | chr22:31664186 | chr22:19504050 | ENST00000340552 | + | 10 | 15 | 331_608 | 418.0 | 687.0 | Domain | Protein kinase |
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Fusion Gene Sequence for LIMK2-CDC45 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000406516_ENST00000407835_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(transcript)=1746nt_BP=1352nt ATCCCGTTCGCGCCTGGGGCTGTGGTCTTCCCGCGCCTGAGGCGGCGGCGGCAGGAGCTGAGGGGAGTTGTAGGGAACTGAGGGGAGCTG CTGTGTCCCCCGCCTCCTCCTCCCCATTTCCGCGCTCCCGGGACCATGTCCGCGCTGGCGGGTGTTCAGAATGCCAGGATTCCCTCACCA ACTGGTACTATGAGAAGGATGGGAAGCTCTACTGCCCCAAGGACTACTGGGGGAAGTTTGGGGAGTTCTGTCATGGGTGCTCCCTGCTGA TGACAGGGCCTTTTATGGTGGCTGGGGAGTTCAAGTACCACCCAGAGTGCTTTGCCTGTATGAGCTGCAAGGTGATCATTGAGGATGGGG ATGCATATGCACTGGTGCAGCATGCCACCCTCTACTGTGGGAAGTGCCACAATGAGGTGGTGCTGGCACCCATGTTTGAGAGACTCTCCA CAGAGTCTGTTCAGGAGCAGCTGCCCTACTCTGTCACGCTCATCTCCATGCCGGCCACCACTGAAGGCAGGCGGGGCTTCTCCGTGTCCG TGGAGAGTGCCTGCTCCAACTACGCCACCACTGTGCAAGTGAAAGAGGTCAACCGGATGCACATCAGTCCCAACAATCGAAACGCCATCC ACCCTGGGGACCGCATCCTGGAGATCAATGGGACCCCCGTCCGCACACTTCGAGTGGAGGAGGTGGAGGATGCAATTAGCCAGACGAGCC AGACACTTCAGCTGTTGATTGAACATGACCCCGTCTCCCAACGCCTGGACCAGCTGCGGCTGGAGGCCCGGCTCGCTCCTCACATGCAGA ATGCCGGACACCCCCACGCCCTCAGCACCCTGGACACCAAGGAGAATCTGGAGGGGACACTGAGGAGACGTTCCCTAAGGCGCAGTAACA GTATCTCCAAGTCCCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGTTCAGCCGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCA GCAGCTATTCACAGCAGATCTTCCGGCCCTGTGACCTAATCCATGGGGAGGTCCTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGA CACACAAAGCCACGGGCAAAGTGATGGTCATGAAAGAGTTAATTCGATGTGATGAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAG TGATGCGCAGCCTGGACCACCCCAATGTGCTCAAGTTCATTGGTGTGCTGTACAAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTG AGGGGGGCACACTGAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCTGGCAGCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAA TGACAAAGAACCGGCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCCCCCTGAGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCC CCCCAGAGACCGACAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGTTTGAGAAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACA ACCATTTTGACCTCTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCAAGTTTCTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTG ATTCTTCCAGAATGACCTTCTTATTTATGTAACTGGCTTTCATTTAGATTGTAAGTTATGGACATGATTTGAGATGTAGAAGCCATTTTT >In-frame_ENST00000406516_ENST00000407835_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(amino acids)=511AA_start in transcript=77_stop in transcript=1612 MRGAAVSPASSSPFPRSRDHVRAGGCSECQDSLTNWYYEKDGKLYCPKDYWGKFGEFCHGCSLLMTGPFMVAGEFKYHPECFACMSCKVI IEDGDAYALVQHATLYCGKCHNEVVLAPMFERLSTESVQEQLPYSVTLISMPATTEGRRGFSVSVESACSNYATTVQVKEVNRMHISPNN RNAIHPGDRILEINGTPVRTLRVEEVEDAISQTSQTLQLLIEHDPVSQRLDQLRLEARLAPHMQNAGHPHALSTLDTKENLEGTLRRRSL RRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSSYSQQIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFL TEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLRSMDPFPWQQKVRFAKGIASGMTKNRRCKLLPLVMAAPLSMEHGTVT -------------------------------------------------------------- >In-frame_ENST00000406516_ENST00000437685_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(transcript)=1745nt_BP=1352nt ATCCCGTTCGCGCCTGGGGCTGTGGTCTTCCCGCGCCTGAGGCGGCGGCGGCAGGAGCTGAGGGGAGTTGTAGGGAACTGAGGGGAGCTG CTGTGTCCCCCGCCTCCTCCTCCCCATTTCCGCGCTCCCGGGACCATGTCCGCGCTGGCGGGTGTTCAGAATGCCAGGATTCCCTCACCA ACTGGTACTATGAGAAGGATGGGAAGCTCTACTGCCCCAAGGACTACTGGGGGAAGTTTGGGGAGTTCTGTCATGGGTGCTCCCTGCTGA TGACAGGGCCTTTTATGGTGGCTGGGGAGTTCAAGTACCACCCAGAGTGCTTTGCCTGTATGAGCTGCAAGGTGATCATTGAGGATGGGG ATGCATATGCACTGGTGCAGCATGCCACCCTCTACTGTGGGAAGTGCCACAATGAGGTGGTGCTGGCACCCATGTTTGAGAGACTCTCCA CAGAGTCTGTTCAGGAGCAGCTGCCCTACTCTGTCACGCTCATCTCCATGCCGGCCACCACTGAAGGCAGGCGGGGCTTCTCCGTGTCCG TGGAGAGTGCCTGCTCCAACTACGCCACCACTGTGCAAGTGAAAGAGGTCAACCGGATGCACATCAGTCCCAACAATCGAAACGCCATCC ACCCTGGGGACCGCATCCTGGAGATCAATGGGACCCCCGTCCGCACACTTCGAGTGGAGGAGGTGGAGGATGCAATTAGCCAGACGAGCC AGACACTTCAGCTGTTGATTGAACATGACCCCGTCTCCCAACGCCTGGACCAGCTGCGGCTGGAGGCCCGGCTCGCTCCTCACATGCAGA ATGCCGGACACCCCCACGCCCTCAGCACCCTGGACACCAAGGAGAATCTGGAGGGGACACTGAGGAGACGTTCCCTAAGGCGCAGTAACA GTATCTCCAAGTCCCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGTTCAGCCGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCA GCAGCTATTCACAGCAGATCTTCCGGCCCTGTGACCTAATCCATGGGGAGGTCCTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGA CACACAAAGCCACGGGCAAAGTGATGGTCATGAAAGAGTTAATTCGATGTGATGAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAG TGATGCGCAGCCTGGACCACCCCAATGTGCTCAAGTTCATTGGTGTGCTGTACAAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTG AGGGGGGCACACTGAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCTGGCAGCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAA TGACAAAGAACCGGCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCCCCCTGAGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCC CCCCAGAGACCGACAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGTTTGAGAAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACA ACCATTTTGACCTCTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCAAGTTTCTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTG ATTCTTCCAGAATGACCTTCTTATTTATGTAACTGGCTTTCATTTAGATTGTAAGTTATGGACATGATTTGAGATGTAGAAGCCATTTTT >In-frame_ENST00000406516_ENST00000437685_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(amino acids)=511AA_start in transcript=77_stop in transcript=1612 MRGAAVSPASSSPFPRSRDHVRAGGCSECQDSLTNWYYEKDGKLYCPKDYWGKFGEFCHGCSLLMTGPFMVAGEFKYHPECFACMSCKVI IEDGDAYALVQHATLYCGKCHNEVVLAPMFERLSTESVQEQLPYSVTLISMPATTEGRRGFSVSVESACSNYATTVQVKEVNRMHISPNN RNAIHPGDRILEINGTPVRTLRVEEVEDAISQTSQTLQLLIEHDPVSQRLDQLRLEARLAPHMQNAGHPHALSTLDTKENLEGTLRRRSL RRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSSYSQQIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFL TEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLRSMDPFPWQQKVRFAKGIASGMTKNRRCKLLPLVMAAPLSMEHGTVT -------------------------------------------------------------- >In-frame_ENST00000406516_ENST00000263201_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(transcript)=1745nt_BP=1352nt ATCCCGTTCGCGCCTGGGGCTGTGGTCTTCCCGCGCCTGAGGCGGCGGCGGCAGGAGCTGAGGGGAGTTGTAGGGAACTGAGGGGAGCTG CTGTGTCCCCCGCCTCCTCCTCCCCATTTCCGCGCTCCCGGGACCATGTCCGCGCTGGCGGGTGTTCAGAATGCCAGGATTCCCTCACCA ACTGGTACTATGAGAAGGATGGGAAGCTCTACTGCCCCAAGGACTACTGGGGGAAGTTTGGGGAGTTCTGTCATGGGTGCTCCCTGCTGA TGACAGGGCCTTTTATGGTGGCTGGGGAGTTCAAGTACCACCCAGAGTGCTTTGCCTGTATGAGCTGCAAGGTGATCATTGAGGATGGGG ATGCATATGCACTGGTGCAGCATGCCACCCTCTACTGTGGGAAGTGCCACAATGAGGTGGTGCTGGCACCCATGTTTGAGAGACTCTCCA CAGAGTCTGTTCAGGAGCAGCTGCCCTACTCTGTCACGCTCATCTCCATGCCGGCCACCACTGAAGGCAGGCGGGGCTTCTCCGTGTCCG TGGAGAGTGCCTGCTCCAACTACGCCACCACTGTGCAAGTGAAAGAGGTCAACCGGATGCACATCAGTCCCAACAATCGAAACGCCATCC ACCCTGGGGACCGCATCCTGGAGATCAATGGGACCCCCGTCCGCACACTTCGAGTGGAGGAGGTGGAGGATGCAATTAGCCAGACGAGCC AGACACTTCAGCTGTTGATTGAACATGACCCCGTCTCCCAACGCCTGGACCAGCTGCGGCTGGAGGCCCGGCTCGCTCCTCACATGCAGA ATGCCGGACACCCCCACGCCCTCAGCACCCTGGACACCAAGGAGAATCTGGAGGGGACACTGAGGAGACGTTCCCTAAGGCGCAGTAACA GTATCTCCAAGTCCCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGTTCAGCCGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCA GCAGCTATTCACAGCAGATCTTCCGGCCCTGTGACCTAATCCATGGGGAGGTCCTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGA CACACAAAGCCACGGGCAAAGTGATGGTCATGAAAGAGTTAATTCGATGTGATGAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAG TGATGCGCAGCCTGGACCACCCCAATGTGCTCAAGTTCATTGGTGTGCTGTACAAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTG AGGGGGGCACACTGAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCTGGCAGCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAA TGACAAAGAACCGGCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCCCCCTGAGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCC CCCCAGAGACCGACAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGTTTGAGAAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACA ACCATTTTGACCTCTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCAAGTTTCTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTG ATTCTTCCAGAATGACCTTCTTATTTATGTAACTGGCTTTCATTTAGATTGTAAGTTATGGACATGATTTGAGATGTAGAAGCCATTTTT >In-frame_ENST00000406516_ENST00000263201_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(amino acids)=511AA_start in transcript=77_stop in transcript=1612 MRGAAVSPASSSPFPRSRDHVRAGGCSECQDSLTNWYYEKDGKLYCPKDYWGKFGEFCHGCSLLMTGPFMVAGEFKYHPECFACMSCKVI IEDGDAYALVQHATLYCGKCHNEVVLAPMFERLSTESVQEQLPYSVTLISMPATTEGRRGFSVSVESACSNYATTVQVKEVNRMHISPNN RNAIHPGDRILEINGTPVRTLRVEEVEDAISQTSQTLQLLIEHDPVSQRLDQLRLEARLAPHMQNAGHPHALSTLDTKENLEGTLRRRSL RRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSSYSQQIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFL TEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLRSMDPFPWQQKVRFAKGIASGMTKNRRCKLLPLVMAAPLSMEHGTVT -------------------------------------------------------------- >In-frame_ENST00000444929_ENST00000407835_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(transcript)=1103nt_BP=709nt GTTCGCGCCTGGGGCTGTGGTCTTCCCGCGCCTGAGGCGGCGGCGGCAGGAGCTGAGGGGAGTTGTAGGGAACTGAGGGGAGCTGCTGTG TCCCCCGCCTCCTCCTCCCCATTTCCGCGCTCCCGGGACCATGTCCGCGCTGGCGGGTGAAGATGTCTGGAGGTGTCCAGGCTGTGGGGA CCACATTGCTCCAAGCCAGATATGGTACAGGACTGTCAACGAAACCTGGCACGGCTCTTGCTTCCGGCGCAGTAACAGTATCTCCAAGTC CCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGTTCAGCCGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCAGCAGCTATTCACA GCAGATCTTCCGGCCCTGTGACCTAATCCATGGGGAGGTCCTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGACACACAAAGCCAC GGGCAAAGTGATGGTCATGAAAGAGTTAATTCGATGTGATGAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAGTGATGCGCAGCCT GGACCACCCCAATGTGCTCAAGTTCATTGGTGTGCTGTACAAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTGAGGGGGGCACACT GAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCTGGCAGCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAATGACAAAGAACCG GCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCCCCCTGAGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCCCCCCAGAGACCGA CAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGTTTGAGAAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACAACCATTTTGACCT CTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCAAGTTTCTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTGATTCTTCCAGAAT GACCTTCTTATTTATGTAACTGGCTTTCATTTAGATTGTAAGTTATGGACATGATTTGAGATGTAGAAGCCATTTTTTATTAAATAAAAT >In-frame_ENST00000444929_ENST00000407835_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(amino acids)=295AA_start in transcript=82_stop in transcript=969 MLCPPPPPPHFRAPGTMSALAGEDVWRCPGCGDHIAPSQIWYRTVNETWHGSCFRRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSS YSQQIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEG GTLKDFLRSMDPFPWQQKVRFAKGIASGMTKNRRCKLLPLVMAAPLSMEHGTVTVVGIPPETDSSDRKNFFGRAFEKAAESTSSRMLHNH -------------------------------------------------------------- >In-frame_ENST00000444929_ENST00000437685_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(transcript)=1102nt_BP=709nt GTTCGCGCCTGGGGCTGTGGTCTTCCCGCGCCTGAGGCGGCGGCGGCAGGAGCTGAGGGGAGTTGTAGGGAACTGAGGGGAGCTGCTGTG TCCCCCGCCTCCTCCTCCCCATTTCCGCGCTCCCGGGACCATGTCCGCGCTGGCGGGTGAAGATGTCTGGAGGTGTCCAGGCTGTGGGGA CCACATTGCTCCAAGCCAGATATGGTACAGGACTGTCAACGAAACCTGGCACGGCTCTTGCTTCCGGCGCAGTAACAGTATCTCCAAGTC CCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGTTCAGCCGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCAGCAGCTATTCACA GCAGATCTTCCGGCCCTGTGACCTAATCCATGGGGAGGTCCTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGACACACAAAGCCAC GGGCAAAGTGATGGTCATGAAAGAGTTAATTCGATGTGATGAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAGTGATGCGCAGCCT GGACCACCCCAATGTGCTCAAGTTCATTGGTGTGCTGTACAAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTGAGGGGGGCACACT GAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCTGGCAGCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAATGACAAAGAACCG GCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCCCCCTGAGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCCCCCCAGAGACCGA CAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGTTTGAGAAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACAACCATTTTGACCT CTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCAAGTTTCTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTGATTCTTCCAGAAT GACCTTCTTATTTATGTAACTGGCTTTCATTTAGATTGTAAGTTATGGACATGATTTGAGATGTAGAAGCCATTTTTTATTAAATAAAAT >In-frame_ENST00000444929_ENST00000437685_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(amino acids)=295AA_start in transcript=82_stop in transcript=969 MLCPPPPPPHFRAPGTMSALAGEDVWRCPGCGDHIAPSQIWYRTVNETWHGSCFRRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSS YSQQIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEG GTLKDFLRSMDPFPWQQKVRFAKGIASGMTKNRRCKLLPLVMAAPLSMEHGTVTVVGIPPETDSSDRKNFFGRAFEKAAESTSSRMLHNH -------------------------------------------------------------- >In-frame_ENST00000444929_ENST00000263201_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(transcript)=1102nt_BP=709nt GTTCGCGCCTGGGGCTGTGGTCTTCCCGCGCCTGAGGCGGCGGCGGCAGGAGCTGAGGGGAGTTGTAGGGAACTGAGGGGAGCTGCTGTG TCCCCCGCCTCCTCCTCCCCATTTCCGCGCTCCCGGGACCATGTCCGCGCTGGCGGGTGAAGATGTCTGGAGGTGTCCAGGCTGTGGGGA CCACATTGCTCCAAGCCAGATATGGTACAGGACTGTCAACGAAACCTGGCACGGCTCTTGCTTCCGGCGCAGTAACAGTATCTCCAAGTC CCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGTTCAGCCGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCAGCAGCTATTCACA GCAGATCTTCCGGCCCTGTGACCTAATCCATGGGGAGGTCCTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGACACACAAAGCCAC GGGCAAAGTGATGGTCATGAAAGAGTTAATTCGATGTGATGAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAGTGATGCGCAGCCT GGACCACCCCAATGTGCTCAAGTTCATTGGTGTGCTGTACAAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTGAGGGGGGCACACT GAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCTGGCAGCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAATGACAAAGAACCG GCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCCCCCTGAGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCCCCCCAGAGACCGA CAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGTTTGAGAAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACAACCATTTTGACCT CTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCAAGTTTCTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTGATTCTTCCAGAAT GACCTTCTTATTTATGTAACTGGCTTTCATTTAGATTGTAAGTTATGGACATGATTTGAGATGTAGAAGCCATTTTTTATTAAATAAAAT >In-frame_ENST00000444929_ENST00000263201_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(amino acids)=295AA_start in transcript=82_stop in transcript=969 MLCPPPPPPHFRAPGTMSALAGEDVWRCPGCGDHIAPSQIWYRTVNETWHGSCFRRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSS YSQQIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEG GTLKDFLRSMDPFPWQQKVRFAKGIASGMTKNRRCKLLPLVMAAPLSMEHGTVTVVGIPPETDSSDRKNFFGRAFEKAAESTSSRMLHNH -------------------------------------------------------------- >In-frame_ENST00000331728_ENST00000407835_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(transcript)=1825nt_BP=1431nt GTGGTCTTCCCGCGCCTGAGGCGGCGGCGGCAGGAGCTGAGGGGAGTTGTAGGGAACTGAGGGGAGCTGCTGTGTCCCCCGCCTCCTCCT CCCCATTTCCGCGCTCCCGGGACCATGTCCGCGCTGGCGGGTGAAGATGTCTGGAGGTGTCCAGGCTGTGGGGACCACATTGCTCCAAGC CAGATATGGTACAGGACTGTCAACGAAACCTGGCACGGCTCTTGCTTCCGGTGTTCAGAATGCCAGGATTCCCTCACCAACTGGTACTAT GAGAAGGATGGGAAGCTCTACTGCCCCAAGGACTACTGGGGGAAGTTTGGGGAGTTCTGTCATGGGTGCTCCCTGCTGATGACAGGGCCT TTTATGGTGGCTGGGGAGTTCAAGTACCACCCAGAGTGCTTTGCCTGTATGAGCTGCAAGGTGATCATTGAGGATGGGGATGCATATGCA CTGGTGCAGCATGCCACCCTCTACTGTGGGAAGTGCCACAATGAGGTGGTGCTGGCACCCATGTTTGAGAGACTCTCCACAGAGTCTGTT CAGGAGCAGCTGCCCTACTCTGTCACGCTCATCTCCATGCCGGCCACCACTGAAGGCAGGCGGGGCTTCTCCGTGTCCGTGGAGAGTGCC TGCTCCAACTACGCCACCACTGTGCAAGTGAAAGAGGTCAACCGGATGCACATCAGTCCCAACAATCGAAACGCCATCCACCCTGGGGAC CGCATCCTGGAGATCAATGGGACCCCCGTCCGCACACTTCGAGTGGAGGAGGTGGAGGATGCAATTAGCCAGACGAGCCAGACACTTCAG CTGTTGATTGAACATGACCCCGTCTCCCAACGCCTGGACCAGCTGCGGCTGGAGGCCCGGCTCGCTCCTCACATGCAGAATGCCGGACAC CCCCACGCCCTCAGCACCCTGGACACCAAGGAGAATCTGGAGGGGACACTGAGGAGACGTTCCCTAAGGCGCAGTAACAGTATCTCCAAG TCCCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGTTCAGCCGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCAGCAGCTATTCA CAGCAGATCTTCCGGCCCTGTGACCTAATCCATGGGGAGGTCCTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGACACACAAAGCC ACGGGCAAAGTGATGGTCATGAAAGAGTTAATTCGATGTGATGAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAGTGATGCGCAGC CTGGACCACCCCAATGTGCTCAAGTTCATTGGTGTGCTGTACAAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTGAGGGGGGCACA CTGAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCTGGCAGCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAATGACAAAGAAC CGGCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCCCCCTGAGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCCCCCCAGAGACC GACAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGTTTGAGAAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACAACCATTTTGAC CTCTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCAAGTTTCTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTGATTCTTCCAGA ATGACCTTCTTATTTATGTAACTGGCTTTCATTTAGATTGTAAGTTATGGACATGATTTGAGATGTAGAAGCCATTTTTTATTAAATAAA >In-frame_ENST00000331728_ENST00000407835_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(amino acids)=541AA_start in transcript=66_stop in transcript=1691 MLCPPPPPPHFRAPGTMSALAGEDVWRCPGCGDHIAPSQIWYRTVNETWHGSCFRCSECQDSLTNWYYEKDGKLYCPKDYWGKFGEFCHG CSLLMTGPFMVAGEFKYHPECFACMSCKVIIEDGDAYALVQHATLYCGKCHNEVVLAPMFERLSTESVQEQLPYSVTLISMPATTEGRRG FSVSVESACSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAISQTSQTLQLLIEHDPVSQRLDQLRLEARLA PHMQNAGHPHALSTLDTKENLEGTLRRRSLRRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSSYSQQIFRPCDLIHGEVLGKGFFGQ AIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLRSMDPFPWQQKVRFAKG IASGMTKNRRCKLLPLVMAAPLSMEHGTVTVVGIPPETDSSDRKNFFGRAFEKAAESTSSRMLHNHFDLSVIELKAEDRSKFLDALISLL -------------------------------------------------------------- >In-frame_ENST00000331728_ENST00000437685_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(transcript)=1824nt_BP=1431nt GTGGTCTTCCCGCGCCTGAGGCGGCGGCGGCAGGAGCTGAGGGGAGTTGTAGGGAACTGAGGGGAGCTGCTGTGTCCCCCGCCTCCTCCT CCCCATTTCCGCGCTCCCGGGACCATGTCCGCGCTGGCGGGTGAAGATGTCTGGAGGTGTCCAGGCTGTGGGGACCACATTGCTCCAAGC CAGATATGGTACAGGACTGTCAACGAAACCTGGCACGGCTCTTGCTTCCGGTGTTCAGAATGCCAGGATTCCCTCACCAACTGGTACTAT GAGAAGGATGGGAAGCTCTACTGCCCCAAGGACTACTGGGGGAAGTTTGGGGAGTTCTGTCATGGGTGCTCCCTGCTGATGACAGGGCCT TTTATGGTGGCTGGGGAGTTCAAGTACCACCCAGAGTGCTTTGCCTGTATGAGCTGCAAGGTGATCATTGAGGATGGGGATGCATATGCA CTGGTGCAGCATGCCACCCTCTACTGTGGGAAGTGCCACAATGAGGTGGTGCTGGCACCCATGTTTGAGAGACTCTCCACAGAGTCTGTT CAGGAGCAGCTGCCCTACTCTGTCACGCTCATCTCCATGCCGGCCACCACTGAAGGCAGGCGGGGCTTCTCCGTGTCCGTGGAGAGTGCC TGCTCCAACTACGCCACCACTGTGCAAGTGAAAGAGGTCAACCGGATGCACATCAGTCCCAACAATCGAAACGCCATCCACCCTGGGGAC CGCATCCTGGAGATCAATGGGACCCCCGTCCGCACACTTCGAGTGGAGGAGGTGGAGGATGCAATTAGCCAGACGAGCCAGACACTTCAG CTGTTGATTGAACATGACCCCGTCTCCCAACGCCTGGACCAGCTGCGGCTGGAGGCCCGGCTCGCTCCTCACATGCAGAATGCCGGACAC CCCCACGCCCTCAGCACCCTGGACACCAAGGAGAATCTGGAGGGGACACTGAGGAGACGTTCCCTAAGGCGCAGTAACAGTATCTCCAAG TCCCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGTTCAGCCGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCAGCAGCTATTCA CAGCAGATCTTCCGGCCCTGTGACCTAATCCATGGGGAGGTCCTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGACACACAAAGCC ACGGGCAAAGTGATGGTCATGAAAGAGTTAATTCGATGTGATGAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAGTGATGCGCAGC CTGGACCACCCCAATGTGCTCAAGTTCATTGGTGTGCTGTACAAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTGAGGGGGGCACA CTGAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCTGGCAGCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAATGACAAAGAAC CGGCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCCCCCTGAGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCCCCCCAGAGACC GACAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGTTTGAGAAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACAACCATTTTGAC CTCTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCAAGTTTCTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTGATTCTTCCAGA ATGACCTTCTTATTTATGTAACTGGCTTTCATTTAGATTGTAAGTTATGGACATGATTTGAGATGTAGAAGCCATTTTTTATTAAATAAA >In-frame_ENST00000331728_ENST00000437685_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(amino acids)=541AA_start in transcript=66_stop in transcript=1691 MLCPPPPPPHFRAPGTMSALAGEDVWRCPGCGDHIAPSQIWYRTVNETWHGSCFRCSECQDSLTNWYYEKDGKLYCPKDYWGKFGEFCHG CSLLMTGPFMVAGEFKYHPECFACMSCKVIIEDGDAYALVQHATLYCGKCHNEVVLAPMFERLSTESVQEQLPYSVTLISMPATTEGRRG FSVSVESACSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAISQTSQTLQLLIEHDPVSQRLDQLRLEARLA PHMQNAGHPHALSTLDTKENLEGTLRRRSLRRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSSYSQQIFRPCDLIHGEVLGKGFFGQ AIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLRSMDPFPWQQKVRFAKG IASGMTKNRRCKLLPLVMAAPLSMEHGTVTVVGIPPETDSSDRKNFFGRAFEKAAESTSSRMLHNHFDLSVIELKAEDRSKFLDALISLL -------------------------------------------------------------- >In-frame_ENST00000331728_ENST00000263201_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(transcript)=1824nt_BP=1431nt GTGGTCTTCCCGCGCCTGAGGCGGCGGCGGCAGGAGCTGAGGGGAGTTGTAGGGAACTGAGGGGAGCTGCTGTGTCCCCCGCCTCCTCCT CCCCATTTCCGCGCTCCCGGGACCATGTCCGCGCTGGCGGGTGAAGATGTCTGGAGGTGTCCAGGCTGTGGGGACCACATTGCTCCAAGC CAGATATGGTACAGGACTGTCAACGAAACCTGGCACGGCTCTTGCTTCCGGTGTTCAGAATGCCAGGATTCCCTCACCAACTGGTACTAT GAGAAGGATGGGAAGCTCTACTGCCCCAAGGACTACTGGGGGAAGTTTGGGGAGTTCTGTCATGGGTGCTCCCTGCTGATGACAGGGCCT TTTATGGTGGCTGGGGAGTTCAAGTACCACCCAGAGTGCTTTGCCTGTATGAGCTGCAAGGTGATCATTGAGGATGGGGATGCATATGCA CTGGTGCAGCATGCCACCCTCTACTGTGGGAAGTGCCACAATGAGGTGGTGCTGGCACCCATGTTTGAGAGACTCTCCACAGAGTCTGTT CAGGAGCAGCTGCCCTACTCTGTCACGCTCATCTCCATGCCGGCCACCACTGAAGGCAGGCGGGGCTTCTCCGTGTCCGTGGAGAGTGCC TGCTCCAACTACGCCACCACTGTGCAAGTGAAAGAGGTCAACCGGATGCACATCAGTCCCAACAATCGAAACGCCATCCACCCTGGGGAC CGCATCCTGGAGATCAATGGGACCCCCGTCCGCACACTTCGAGTGGAGGAGGTGGAGGATGCAATTAGCCAGACGAGCCAGACACTTCAG CTGTTGATTGAACATGACCCCGTCTCCCAACGCCTGGACCAGCTGCGGCTGGAGGCCCGGCTCGCTCCTCACATGCAGAATGCCGGACAC CCCCACGCCCTCAGCACCCTGGACACCAAGGAGAATCTGGAGGGGACACTGAGGAGACGTTCCCTAAGGCGCAGTAACAGTATCTCCAAG TCCCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGTTCAGCCGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCAGCAGCTATTCA CAGCAGATCTTCCGGCCCTGTGACCTAATCCATGGGGAGGTCCTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGACACACAAAGCC ACGGGCAAAGTGATGGTCATGAAAGAGTTAATTCGATGTGATGAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAGTGATGCGCAGC CTGGACCACCCCAATGTGCTCAAGTTCATTGGTGTGCTGTACAAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTGAGGGGGGCACA CTGAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCTGGCAGCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAATGACAAAGAAC CGGCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCCCCCTGAGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCCCCCCAGAGACC GACAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGTTTGAGAAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACAACCATTTTGAC CTCTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCAAGTTTCTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTGATTCTTCCAGA ATGACCTTCTTATTTATGTAACTGGCTTTCATTTAGATTGTAAGTTATGGACATGATTTGAGATGTAGAAGCCATTTTTTATTAAATAAA >In-frame_ENST00000331728_ENST00000263201_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(amino acids)=541AA_start in transcript=66_stop in transcript=1691 MLCPPPPPPHFRAPGTMSALAGEDVWRCPGCGDHIAPSQIWYRTVNETWHGSCFRCSECQDSLTNWYYEKDGKLYCPKDYWGKFGEFCHG CSLLMTGPFMVAGEFKYHPECFACMSCKVIIEDGDAYALVQHATLYCGKCHNEVVLAPMFERLSTESVQEQLPYSVTLISMPATTEGRRG FSVSVESACSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAISQTSQTLQLLIEHDPVSQRLDQLRLEARLA PHMQNAGHPHALSTLDTKENLEGTLRRRSLRRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSSYSQQIFRPCDLIHGEVLGKGFFGQ AIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLRSMDPFPWQQKVRFAKG IASGMTKNRRCKLLPLVMAAPLSMEHGTVTVVGIPPETDSSDRKNFFGRAFEKAAESTSSRMLHNHFDLSVIELKAEDRSKFLDALISLL -------------------------------------------------------------- >In-frame_ENST00000333611_ENST00000407835_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(transcript)=1963nt_BP=1569nt CTCAAGAATGCCAGTGTGTGTGTAGCCTCCACAGAGAGGTCGTTTTCTCGGAGTCCAGAGGGGCCGCCTGAGCTTCTGAGAACTAGGGAG GAGCCATCCCAGCCATGAGCCCCTGTGGGAATCTGCTGGGGGCCAAGTGGCCTGGAGTCCTCAGGCTCCCGCAGCTGCTCCGGAGGGAGA GGTGAGCTCAGGGCAGCCTGCCTGCAGCCAGAGGTGCCGGGAGCCCCGGGCCTGTCATGGTGGCCATCTACAGCCGGCCTGAGGCAGTCA CAGACGGATTTGCAGCTGAGCCTGTCTATCTGGTGTGGGAAGAAGATGGGGAGTTACTTGTCAGTCCCGGCTTACTTCACCTCCAGAGAC CTGTTTCGGTGTTCAGAATGCCAGGATTCCCTCACCAACTGGTACTATGAGAAGGATGGGAAGCTCTACTGCCCCAAGGACTACTGGGGG AAGTTTGGGGAGTTCTGTCATGGGTGCTCCCTGCTGATGACAGGGCCTTTTATGGTGGCTGGGGAGTTCAAGTACCACCCAGAGTGCTTT GCCTGTATGAGCTGCAAGGTGATCATTGAGGATGGGGATGCATATGCACTGGTGCAGCATGCCACCCTCTACTGTGGGAAGTGCCACAAT GAGGTGGTGCTGGCACCCATGTTTGAGAGACTCTCCACAGAGTCTGTTCAGGAGCAGCTGCCCTACTCTGTCACGCTCATCTCCATGCCG GCCACCACTGAAGGCAGGCGGGGCTTCTCCGTGTCCGTGGAGAGTGCCTGCTCCAACTACGCCACCACTGTGCAAGTGAAAGAGGTCAAC CGGATGCACATCAGTCCCAACAATCGAAACGCCATCCACCCTGGGGACCGCATCCTGGAGATCAATGGGACCCCCGTCCGCACACTTCGA GTGGAGGAGGTGGAGGATGCAATTAGCCAGACGAGCCAGACACTTCAGCTGTTGATTGAACATGACCCCGTCTCCCAACGCCTGGACCAG CTGCGGCTGGAGGCCCGGCTCGCTCCTCACATGCAGAATGCCGGACACCCCCACGCCCTCAGCACCCTGGACACCAAGGAGAATCTGGAG GGGACACTGAGGAGACGTTCCCTAAGGCGCAGTAACAGTATCTCCAAGTCCCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGTTCAGC CGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCAGCAGCTATTCACAGCAGATCTTCCGGCCCTGTGACCTAATCCATGGGGAGGTC CTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGACACACAAAGCCACGGGCAAAGTGATGGTCATGAAAGAGTTAATTCGATGTGAT GAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAGTGATGCGCAGCCTGGACCACCCCAATGTGCTCAAGTTCATTGGTGTGCTGTAC AAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTGAGGGGGGCACACTGAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCTGGCAG CAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAATGACAAAGAACCGGCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCCCCCTG AGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCCCCCCAGAGACCGACAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGTTTGAG AAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACAACCATTTTGACCTCTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCAAGTTT CTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTGATTCTTCCAGAATGACCTTCTTATTTATGTAACTGGCTTTCATTTAGATTGTA >In-frame_ENST00000333611_ENST00000407835_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(amino acids)=562AA_start in transcript=141_stop in transcript=1829 MESSGSRSCSGGRGELRAACLQPEVPGAPGLSWWPSTAGLRQSQTDLQLSLSIWCGKKMGSYLSVPAYFTSRDLFRCSECQDSLTNWYYE KDGKLYCPKDYWGKFGEFCHGCSLLMTGPFMVAGEFKYHPECFACMSCKVIIEDGDAYALVQHATLYCGKCHNEVVLAPMFERLSTESVQ EQLPYSVTLISMPATTEGRRGFSVSVESACSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAISQTSQTLQL LIEHDPVSQRLDQLRLEARLAPHMQNAGHPHALSTLDTKENLEGTLRRRSLRRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSSYSQ QIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTL KDFLRSMDPFPWQQKVRFAKGIASGMTKNRRCKLLPLVMAAPLSMEHGTVTVVGIPPETDSSDRKNFFGRAFEKAAESTSSRMLHNHFDL -------------------------------------------------------------- >In-frame_ENST00000333611_ENST00000437685_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(transcript)=1962nt_BP=1569nt CTCAAGAATGCCAGTGTGTGTGTAGCCTCCACAGAGAGGTCGTTTTCTCGGAGTCCAGAGGGGCCGCCTGAGCTTCTGAGAACTAGGGAG GAGCCATCCCAGCCATGAGCCCCTGTGGGAATCTGCTGGGGGCCAAGTGGCCTGGAGTCCTCAGGCTCCCGCAGCTGCTCCGGAGGGAGA GGTGAGCTCAGGGCAGCCTGCCTGCAGCCAGAGGTGCCGGGAGCCCCGGGCCTGTCATGGTGGCCATCTACAGCCGGCCTGAGGCAGTCA CAGACGGATTTGCAGCTGAGCCTGTCTATCTGGTGTGGGAAGAAGATGGGGAGTTACTTGTCAGTCCCGGCTTACTTCACCTCCAGAGAC CTGTTTCGGTGTTCAGAATGCCAGGATTCCCTCACCAACTGGTACTATGAGAAGGATGGGAAGCTCTACTGCCCCAAGGACTACTGGGGG AAGTTTGGGGAGTTCTGTCATGGGTGCTCCCTGCTGATGACAGGGCCTTTTATGGTGGCTGGGGAGTTCAAGTACCACCCAGAGTGCTTT GCCTGTATGAGCTGCAAGGTGATCATTGAGGATGGGGATGCATATGCACTGGTGCAGCATGCCACCCTCTACTGTGGGAAGTGCCACAAT GAGGTGGTGCTGGCACCCATGTTTGAGAGACTCTCCACAGAGTCTGTTCAGGAGCAGCTGCCCTACTCTGTCACGCTCATCTCCATGCCG GCCACCACTGAAGGCAGGCGGGGCTTCTCCGTGTCCGTGGAGAGTGCCTGCTCCAACTACGCCACCACTGTGCAAGTGAAAGAGGTCAAC CGGATGCACATCAGTCCCAACAATCGAAACGCCATCCACCCTGGGGACCGCATCCTGGAGATCAATGGGACCCCCGTCCGCACACTTCGA GTGGAGGAGGTGGAGGATGCAATTAGCCAGACGAGCCAGACACTTCAGCTGTTGATTGAACATGACCCCGTCTCCCAACGCCTGGACCAG CTGCGGCTGGAGGCCCGGCTCGCTCCTCACATGCAGAATGCCGGACACCCCCACGCCCTCAGCACCCTGGACACCAAGGAGAATCTGGAG GGGACACTGAGGAGACGTTCCCTAAGGCGCAGTAACAGTATCTCCAAGTCCCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGTTCAGC CGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCAGCAGCTATTCACAGCAGATCTTCCGGCCCTGTGACCTAATCCATGGGGAGGTC CTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGACACACAAAGCCACGGGCAAAGTGATGGTCATGAAAGAGTTAATTCGATGTGAT GAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAGTGATGCGCAGCCTGGACCACCCCAATGTGCTCAAGTTCATTGGTGTGCTGTAC AAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTGAGGGGGGCACACTGAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCTGGCAG CAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAATGACAAAGAACCGGCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCCCCCTG AGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCCCCCCAGAGACCGACAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGTTTGAG AAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACAACCATTTTGACCTCTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCAAGTTT CTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTGATTCTTCCAGAATGACCTTCTTATTTATGTAACTGGCTTTCATTTAGATTGTA >In-frame_ENST00000333611_ENST00000437685_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(amino acids)=562AA_start in transcript=141_stop in transcript=1829 MESSGSRSCSGGRGELRAACLQPEVPGAPGLSWWPSTAGLRQSQTDLQLSLSIWCGKKMGSYLSVPAYFTSRDLFRCSECQDSLTNWYYE KDGKLYCPKDYWGKFGEFCHGCSLLMTGPFMVAGEFKYHPECFACMSCKVIIEDGDAYALVQHATLYCGKCHNEVVLAPMFERLSTESVQ EQLPYSVTLISMPATTEGRRGFSVSVESACSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAISQTSQTLQL LIEHDPVSQRLDQLRLEARLAPHMQNAGHPHALSTLDTKENLEGTLRRRSLRRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSSYSQ QIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTL KDFLRSMDPFPWQQKVRFAKGIASGMTKNRRCKLLPLVMAAPLSMEHGTVTVVGIPPETDSSDRKNFFGRAFEKAAESTSSRMLHNHFDL -------------------------------------------------------------- >In-frame_ENST00000333611_ENST00000263201_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(transcript)=1962nt_BP=1569nt CTCAAGAATGCCAGTGTGTGTGTAGCCTCCACAGAGAGGTCGTTTTCTCGGAGTCCAGAGGGGCCGCCTGAGCTTCTGAGAACTAGGGAG GAGCCATCCCAGCCATGAGCCCCTGTGGGAATCTGCTGGGGGCCAAGTGGCCTGGAGTCCTCAGGCTCCCGCAGCTGCTCCGGAGGGAGA GGTGAGCTCAGGGCAGCCTGCCTGCAGCCAGAGGTGCCGGGAGCCCCGGGCCTGTCATGGTGGCCATCTACAGCCGGCCTGAGGCAGTCA CAGACGGATTTGCAGCTGAGCCTGTCTATCTGGTGTGGGAAGAAGATGGGGAGTTACTTGTCAGTCCCGGCTTACTTCACCTCCAGAGAC CTGTTTCGGTGTTCAGAATGCCAGGATTCCCTCACCAACTGGTACTATGAGAAGGATGGGAAGCTCTACTGCCCCAAGGACTACTGGGGG AAGTTTGGGGAGTTCTGTCATGGGTGCTCCCTGCTGATGACAGGGCCTTTTATGGTGGCTGGGGAGTTCAAGTACCACCCAGAGTGCTTT GCCTGTATGAGCTGCAAGGTGATCATTGAGGATGGGGATGCATATGCACTGGTGCAGCATGCCACCCTCTACTGTGGGAAGTGCCACAAT GAGGTGGTGCTGGCACCCATGTTTGAGAGACTCTCCACAGAGTCTGTTCAGGAGCAGCTGCCCTACTCTGTCACGCTCATCTCCATGCCG GCCACCACTGAAGGCAGGCGGGGCTTCTCCGTGTCCGTGGAGAGTGCCTGCTCCAACTACGCCACCACTGTGCAAGTGAAAGAGGTCAAC CGGATGCACATCAGTCCCAACAATCGAAACGCCATCCACCCTGGGGACCGCATCCTGGAGATCAATGGGACCCCCGTCCGCACACTTCGA GTGGAGGAGGTGGAGGATGCAATTAGCCAGACGAGCCAGACACTTCAGCTGTTGATTGAACATGACCCCGTCTCCCAACGCCTGGACCAG CTGCGGCTGGAGGCCCGGCTCGCTCCTCACATGCAGAATGCCGGACACCCCCACGCCCTCAGCACCCTGGACACCAAGGAGAATCTGGAG GGGACACTGAGGAGACGTTCCCTAAGGCGCAGTAACAGTATCTCCAAGTCCCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGTTCAGC CGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCAGCAGCTATTCACAGCAGATCTTCCGGCCCTGTGACCTAATCCATGGGGAGGTC CTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGACACACAAAGCCACGGGCAAAGTGATGGTCATGAAAGAGTTAATTCGATGTGAT GAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAGTGATGCGCAGCCTGGACCACCCCAATGTGCTCAAGTTCATTGGTGTGCTGTAC AAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTGAGGGGGGCACACTGAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCTGGCAG CAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAATGACAAAGAACCGGCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCCCCCTG AGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCCCCCCAGAGACCGACAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGTTTGAG AAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACAACCATTTTGACCTCTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCAAGTTT CTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTGATTCTTCCAGAATGACCTTCTTATTTATGTAACTGGCTTTCATTTAGATTGTA >In-frame_ENST00000333611_ENST00000263201_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(amino acids)=562AA_start in transcript=141_stop in transcript=1829 MESSGSRSCSGGRGELRAACLQPEVPGAPGLSWWPSTAGLRQSQTDLQLSLSIWCGKKMGSYLSVPAYFTSRDLFRCSECQDSLTNWYYE KDGKLYCPKDYWGKFGEFCHGCSLLMTGPFMVAGEFKYHPECFACMSCKVIIEDGDAYALVQHATLYCGKCHNEVVLAPMFERLSTESVQ EQLPYSVTLISMPATTEGRRGFSVSVESACSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAISQTSQTLQL LIEHDPVSQRLDQLRLEARLAPHMQNAGHPHALSTLDTKENLEGTLRRRSLRRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSSYSQ QIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTL KDFLRSMDPFPWQQKVRFAKGIASGMTKNRRCKLLPLVMAAPLSMEHGTVTVVGIPPETDSSDRKNFFGRAFEKAAESTSSRMLHNHFDL -------------------------------------------------------------- >In-frame_ENST00000340552_ENST00000407835_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(transcript)=1878nt_BP=1484nt GGGAGGAGCCATCCCAGCCATGAGCCCCTGTGGGAATCTGCTGGGGGCCAAGTGGCCTGGAGTCCTCAGGCTCCCGCAGCTGCTCCGGAG GGAGAGGTGAGCTCAGGGCAGCCTGCCTGCAGCCAGAGGTGCCGGGAGCCCCGGGCCTGTCATGGTGGCCATCTACAGCCGGCCTGAGGC AGTCACAGACGGATTTGCAGCTGAGCCTGTCTATCTGGTGTGGGAAGAAGATGGGGAGTTACTTGTCAGTCCCGGCTTACTTCACCTCCA GAGACCTGTTTCGGTGTTCAGAATGCCAGGATTCCCTCACCAACTGGTACTATGAGAAGGATGGGAAGCTCTACTGCCCCAAGGACTACT GGGGGAAGTTTGGGGAGTTCTGTCATGGGTGCTCCCTGCTGATGACAGGGCCTTTTATGGTGGCTGGGGAGTTCAAGTACCACCCAGAGT GCTTTGCCTGTATGAGCTGCAAGGTGATCATTGAGGATGGGGATGCATATGCACTGGTGCAGCATGCCACCCTCTACTGTGGGAAGTGCC ACAATGAGGTGGTGCTGGCACCCATGTTTGAGAGACTCTCCACAGAGTCTGTTCAGGAGCAGCTGCCCTACTCTGTCACGCTCATCTCCA TGCCGGCCACCACTGAAGGCAGGCGGGGCTTCTCCGTGTCCGTGGAGAGTGCCTGCTCCAACTACGCCACCACTGTGCAAGTGAAAGAGG TCAACCGGATGCACATCAGTCCCAACAATCGAAACGCCATCCACCCTGGGGACCGCATCCTGGAGATCAATGGGACCCCCGTCCGCACAC TTCGAGTGGAGGAGGTGGAGGATGCAATTAGCCAGACGAGCCAGACACTTCAGCTGTTGATTGAACATGACCCCGTCTCCCAACGCCTGG ACCAGCTGCGGCTGGAGGCCCGGCTCGCTCCTCACATGCAGAATGCCGGACACCCCCACGCCCTCAGCACCCTGGACACCAAGGAGAATC TGGAGGGGACACTGAGGAGACGTTCCCTAAGGCGCAGTAACAGTATCTCCAAGTCCCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGT TCAGCCGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCAGCAGCTATTCACAGCAGATCTTCCGGCCCTGTGACCTAATCCATGGGG AGGTCCTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGACACACAAAGCCACGGGCAAAGTGATGGTCATGAAAGAGTTAATTCGAT GTGATGAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAGTGATGCGCAGCCTGGACCACCCCAATGTGCTCAAGTTCATTGGTGTGC TGTACAAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTGAGGGGGGCACACTGAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCT GGCAGCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAATGACAAAGAACCGGCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCC CCCTGAGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCCCCCCAGAGACCGACAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGT TTGAGAAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACAACCATTTTGACCTCTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCA AGTTTCTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTGATTCTTCCAGAATGACCTTCTTATTTATGTAACTGGCTTTCATTTAGA >In-frame_ENST00000340552_ENST00000407835_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(amino acids)=562AA_start in transcript=56_stop in transcript=1744 MESSGSRSCSGGRGELRAACLQPEVPGAPGLSWWPSTAGLRQSQTDLQLSLSIWCGKKMGSYLSVPAYFTSRDLFRCSECQDSLTNWYYE KDGKLYCPKDYWGKFGEFCHGCSLLMTGPFMVAGEFKYHPECFACMSCKVIIEDGDAYALVQHATLYCGKCHNEVVLAPMFERLSTESVQ EQLPYSVTLISMPATTEGRRGFSVSVESACSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAISQTSQTLQL LIEHDPVSQRLDQLRLEARLAPHMQNAGHPHALSTLDTKENLEGTLRRRSLRRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSSYSQ QIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTL KDFLRSMDPFPWQQKVRFAKGIASGMTKNRRCKLLPLVMAAPLSMEHGTVTVVGIPPETDSSDRKNFFGRAFEKAAESTSSRMLHNHFDL -------------------------------------------------------------- >In-frame_ENST00000340552_ENST00000437685_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(transcript)=1877nt_BP=1484nt GGGAGGAGCCATCCCAGCCATGAGCCCCTGTGGGAATCTGCTGGGGGCCAAGTGGCCTGGAGTCCTCAGGCTCCCGCAGCTGCTCCGGAG GGAGAGGTGAGCTCAGGGCAGCCTGCCTGCAGCCAGAGGTGCCGGGAGCCCCGGGCCTGTCATGGTGGCCATCTACAGCCGGCCTGAGGC AGTCACAGACGGATTTGCAGCTGAGCCTGTCTATCTGGTGTGGGAAGAAGATGGGGAGTTACTTGTCAGTCCCGGCTTACTTCACCTCCA GAGACCTGTTTCGGTGTTCAGAATGCCAGGATTCCCTCACCAACTGGTACTATGAGAAGGATGGGAAGCTCTACTGCCCCAAGGACTACT GGGGGAAGTTTGGGGAGTTCTGTCATGGGTGCTCCCTGCTGATGACAGGGCCTTTTATGGTGGCTGGGGAGTTCAAGTACCACCCAGAGT GCTTTGCCTGTATGAGCTGCAAGGTGATCATTGAGGATGGGGATGCATATGCACTGGTGCAGCATGCCACCCTCTACTGTGGGAAGTGCC ACAATGAGGTGGTGCTGGCACCCATGTTTGAGAGACTCTCCACAGAGTCTGTTCAGGAGCAGCTGCCCTACTCTGTCACGCTCATCTCCA TGCCGGCCACCACTGAAGGCAGGCGGGGCTTCTCCGTGTCCGTGGAGAGTGCCTGCTCCAACTACGCCACCACTGTGCAAGTGAAAGAGG TCAACCGGATGCACATCAGTCCCAACAATCGAAACGCCATCCACCCTGGGGACCGCATCCTGGAGATCAATGGGACCCCCGTCCGCACAC TTCGAGTGGAGGAGGTGGAGGATGCAATTAGCCAGACGAGCCAGACACTTCAGCTGTTGATTGAACATGACCCCGTCTCCCAACGCCTGG ACCAGCTGCGGCTGGAGGCCCGGCTCGCTCCTCACATGCAGAATGCCGGACACCCCCACGCCCTCAGCACCCTGGACACCAAGGAGAATC TGGAGGGGACACTGAGGAGACGTTCCCTAAGGCGCAGTAACAGTATCTCCAAGTCCCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGT TCAGCCGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCAGCAGCTATTCACAGCAGATCTTCCGGCCCTGTGACCTAATCCATGGGG AGGTCCTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGACACACAAAGCCACGGGCAAAGTGATGGTCATGAAAGAGTTAATTCGAT GTGATGAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAGTGATGCGCAGCCTGGACCACCCCAATGTGCTCAAGTTCATTGGTGTGC TGTACAAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTGAGGGGGGCACACTGAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCT GGCAGCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAATGACAAAGAACCGGCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCC CCCTGAGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCCCCCCAGAGACCGACAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGT TTGAGAAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACAACCATTTTGACCTCTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCA AGTTTCTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTGATTCTTCCAGAATGACCTTCTTATTTATGTAACTGGCTTTCATTTAGA >In-frame_ENST00000340552_ENST00000437685_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(amino acids)=562AA_start in transcript=56_stop in transcript=1744 MESSGSRSCSGGRGELRAACLQPEVPGAPGLSWWPSTAGLRQSQTDLQLSLSIWCGKKMGSYLSVPAYFTSRDLFRCSECQDSLTNWYYE KDGKLYCPKDYWGKFGEFCHGCSLLMTGPFMVAGEFKYHPECFACMSCKVIIEDGDAYALVQHATLYCGKCHNEVVLAPMFERLSTESVQ EQLPYSVTLISMPATTEGRRGFSVSVESACSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAISQTSQTLQL LIEHDPVSQRLDQLRLEARLAPHMQNAGHPHALSTLDTKENLEGTLRRRSLRRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSSYSQ QIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTL KDFLRSMDPFPWQQKVRFAKGIASGMTKNRRCKLLPLVMAAPLSMEHGTVTVVGIPPETDSSDRKNFFGRAFEKAAESTSSRMLHNHFDL -------------------------------------------------------------- >In-frame_ENST00000340552_ENST00000263201_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(transcript)=1877nt_BP=1484nt GGGAGGAGCCATCCCAGCCATGAGCCCCTGTGGGAATCTGCTGGGGGCCAAGTGGCCTGGAGTCCTCAGGCTCCCGCAGCTGCTCCGGAG GGAGAGGTGAGCTCAGGGCAGCCTGCCTGCAGCCAGAGGTGCCGGGAGCCCCGGGCCTGTCATGGTGGCCATCTACAGCCGGCCTGAGGC AGTCACAGACGGATTTGCAGCTGAGCCTGTCTATCTGGTGTGGGAAGAAGATGGGGAGTTACTTGTCAGTCCCGGCTTACTTCACCTCCA GAGACCTGTTTCGGTGTTCAGAATGCCAGGATTCCCTCACCAACTGGTACTATGAGAAGGATGGGAAGCTCTACTGCCCCAAGGACTACT GGGGGAAGTTTGGGGAGTTCTGTCATGGGTGCTCCCTGCTGATGACAGGGCCTTTTATGGTGGCTGGGGAGTTCAAGTACCACCCAGAGT GCTTTGCCTGTATGAGCTGCAAGGTGATCATTGAGGATGGGGATGCATATGCACTGGTGCAGCATGCCACCCTCTACTGTGGGAAGTGCC ACAATGAGGTGGTGCTGGCACCCATGTTTGAGAGACTCTCCACAGAGTCTGTTCAGGAGCAGCTGCCCTACTCTGTCACGCTCATCTCCA TGCCGGCCACCACTGAAGGCAGGCGGGGCTTCTCCGTGTCCGTGGAGAGTGCCTGCTCCAACTACGCCACCACTGTGCAAGTGAAAGAGG TCAACCGGATGCACATCAGTCCCAACAATCGAAACGCCATCCACCCTGGGGACCGCATCCTGGAGATCAATGGGACCCCCGTCCGCACAC TTCGAGTGGAGGAGGTGGAGGATGCAATTAGCCAGACGAGCCAGACACTTCAGCTGTTGATTGAACATGACCCCGTCTCCCAACGCCTGG ACCAGCTGCGGCTGGAGGCCCGGCTCGCTCCTCACATGCAGAATGCCGGACACCCCCACGCCCTCAGCACCCTGGACACCAAGGAGAATC TGGAGGGGACACTGAGGAGACGTTCCCTAAGGCGCAGTAACAGTATCTCCAAGTCCCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGT TCAGCCGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCAGCAGCTATTCACAGCAGATCTTCCGGCCCTGTGACCTAATCCATGGGG AGGTCCTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGACACACAAAGCCACGGGCAAAGTGATGGTCATGAAAGAGTTAATTCGAT GTGATGAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAGTGATGCGCAGCCTGGACCACCCCAATGTGCTCAAGTTCATTGGTGTGC TGTACAAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTGAGGGGGGCACACTGAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCT GGCAGCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAATGACAAAGAACCGGCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCC CCCTGAGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCCCCCCAGAGACCGACAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGT TTGAGAAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACAACCATTTTGACCTCTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCA AGTTTCTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTGATTCTTCCAGAATGACCTTCTTATTTATGTAACTGGCTTTCATTTAGA >In-frame_ENST00000340552_ENST00000263201_TCGA-DK-A3IN-01A_LIMK2_chr22_31664186_+_CDC45_chr22_19504050_length(amino acids)=562AA_start in transcript=56_stop in transcript=1744 MESSGSRSCSGGRGELRAACLQPEVPGAPGLSWWPSTAGLRQSQTDLQLSLSIWCGKKMGSYLSVPAYFTSRDLFRCSECQDSLTNWYYE KDGKLYCPKDYWGKFGEFCHGCSLLMTGPFMVAGEFKYHPECFACMSCKVIIEDGDAYALVQHATLYCGKCHNEVVLAPMFERLSTESVQ EQLPYSVTLISMPATTEGRRGFSVSVESACSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAISQTSQTLQL LIEHDPVSQRLDQLRLEARLAPHMQNAGHPHALSTLDTKENLEGTLRRRSLRRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSSYSQ QIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTL KDFLRSMDPFPWQQKVRFAKGIASGMTKNRRCKLLPLVMAAPLSMEHGTVTVVGIPPETDSSDRKNFFGRAFEKAAESTSSRMLHNHFDL -------------------------------------------------------------- >In-frame_ENST00000406516_ENST00000407835_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(transcript)=1746nt_BP=1352nt ATCCCGTTCGCGCCTGGGGCTGTGGTCTTCCCGCGCCTGAGGCGGCGGCGGCAGGAGCTGAGGGGAGTTGTAGGGAACTGAGGGGAGCTG CTGTGTCCCCCGCCTCCTCCTCCCCATTTCCGCGCTCCCGGGACCATGTCCGCGCTGGCGGGTGTTCAGAATGCCAGGATTCCCTCACCA ACTGGTACTATGAGAAGGATGGGAAGCTCTACTGCCCCAAGGACTACTGGGGGAAGTTTGGGGAGTTCTGTCATGGGTGCTCCCTGCTGA TGACAGGGCCTTTTATGGTGGCTGGGGAGTTCAAGTACCACCCAGAGTGCTTTGCCTGTATGAGCTGCAAGGTGATCATTGAGGATGGGG ATGCATATGCACTGGTGCAGCATGCCACCCTCTACTGTGGGAAGTGCCACAATGAGGTGGTGCTGGCACCCATGTTTGAGAGACTCTCCA CAGAGTCTGTTCAGGAGCAGCTGCCCTACTCTGTCACGCTCATCTCCATGCCGGCCACCACTGAAGGCAGGCGGGGCTTCTCCGTGTCCG TGGAGAGTGCCTGCTCCAACTACGCCACCACTGTGCAAGTGAAAGAGGTCAACCGGATGCACATCAGTCCCAACAATCGAAACGCCATCC ACCCTGGGGACCGCATCCTGGAGATCAATGGGACCCCCGTCCGCACACTTCGAGTGGAGGAGGTGGAGGATGCAATTAGCCAGACGAGCC AGACACTTCAGCTGTTGATTGAACATGACCCCGTCTCCCAACGCCTGGACCAGCTGCGGCTGGAGGCCCGGCTCGCTCCTCACATGCAGA ATGCCGGACACCCCCACGCCCTCAGCACCCTGGACACCAAGGAGAATCTGGAGGGGACACTGAGGAGACGTTCCCTAAGGCGCAGTAACA GTATCTCCAAGTCCCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGTTCAGCCGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCA GCAGCTATTCACAGCAGATCTTCCGGCCCTGTGACCTAATCCATGGGGAGGTCCTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGA CACACAAAGCCACGGGCAAAGTGATGGTCATGAAAGAGTTAATTCGATGTGATGAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAG TGATGCGCAGCCTGGACCACCCCAATGTGCTCAAGTTCATTGGTGTGCTGTACAAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTG AGGGGGGCACACTGAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCTGGCAGCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAA TGACAAAGAACCGGCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCCCCCTGAGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCC CCCCAGAGACCGACAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGTTTGAGAAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACA ACCATTTTGACCTCTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCAAGTTTCTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTG ATTCTTCCAGAATGACCTTCTTATTTATGTAACTGGCTTTCATTTAGATTGTAAGTTATGGACATGATTTGAGATGTAGAAGCCATTTTT >In-frame_ENST00000406516_ENST00000407835_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(amino acids)=511AA_start in transcript=77_stop in transcript=1612 MRGAAVSPASSSPFPRSRDHVRAGGCSECQDSLTNWYYEKDGKLYCPKDYWGKFGEFCHGCSLLMTGPFMVAGEFKYHPECFACMSCKVI IEDGDAYALVQHATLYCGKCHNEVVLAPMFERLSTESVQEQLPYSVTLISMPATTEGRRGFSVSVESACSNYATTVQVKEVNRMHISPNN RNAIHPGDRILEINGTPVRTLRVEEVEDAISQTSQTLQLLIEHDPVSQRLDQLRLEARLAPHMQNAGHPHALSTLDTKENLEGTLRRRSL RRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSSYSQQIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFL TEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLRSMDPFPWQQKVRFAKGIASGMTKNRRCKLLPLVMAAPLSMEHGTVT -------------------------------------------------------------- >In-frame_ENST00000406516_ENST00000437685_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(transcript)=1745nt_BP=1352nt ATCCCGTTCGCGCCTGGGGCTGTGGTCTTCCCGCGCCTGAGGCGGCGGCGGCAGGAGCTGAGGGGAGTTGTAGGGAACTGAGGGGAGCTG CTGTGTCCCCCGCCTCCTCCTCCCCATTTCCGCGCTCCCGGGACCATGTCCGCGCTGGCGGGTGTTCAGAATGCCAGGATTCCCTCACCA ACTGGTACTATGAGAAGGATGGGAAGCTCTACTGCCCCAAGGACTACTGGGGGAAGTTTGGGGAGTTCTGTCATGGGTGCTCCCTGCTGA TGACAGGGCCTTTTATGGTGGCTGGGGAGTTCAAGTACCACCCAGAGTGCTTTGCCTGTATGAGCTGCAAGGTGATCATTGAGGATGGGG ATGCATATGCACTGGTGCAGCATGCCACCCTCTACTGTGGGAAGTGCCACAATGAGGTGGTGCTGGCACCCATGTTTGAGAGACTCTCCA CAGAGTCTGTTCAGGAGCAGCTGCCCTACTCTGTCACGCTCATCTCCATGCCGGCCACCACTGAAGGCAGGCGGGGCTTCTCCGTGTCCG TGGAGAGTGCCTGCTCCAACTACGCCACCACTGTGCAAGTGAAAGAGGTCAACCGGATGCACATCAGTCCCAACAATCGAAACGCCATCC ACCCTGGGGACCGCATCCTGGAGATCAATGGGACCCCCGTCCGCACACTTCGAGTGGAGGAGGTGGAGGATGCAATTAGCCAGACGAGCC AGACACTTCAGCTGTTGATTGAACATGACCCCGTCTCCCAACGCCTGGACCAGCTGCGGCTGGAGGCCCGGCTCGCTCCTCACATGCAGA ATGCCGGACACCCCCACGCCCTCAGCACCCTGGACACCAAGGAGAATCTGGAGGGGACACTGAGGAGACGTTCCCTAAGGCGCAGTAACA GTATCTCCAAGTCCCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGTTCAGCCGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCA GCAGCTATTCACAGCAGATCTTCCGGCCCTGTGACCTAATCCATGGGGAGGTCCTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGA CACACAAAGCCACGGGCAAAGTGATGGTCATGAAAGAGTTAATTCGATGTGATGAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAG TGATGCGCAGCCTGGACCACCCCAATGTGCTCAAGTTCATTGGTGTGCTGTACAAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTG AGGGGGGCACACTGAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCTGGCAGCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAA TGACAAAGAACCGGCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCCCCCTGAGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCC CCCCAGAGACCGACAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGTTTGAGAAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACA ACCATTTTGACCTCTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCAAGTTTCTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTG ATTCTTCCAGAATGACCTTCTTATTTATGTAACTGGCTTTCATTTAGATTGTAAGTTATGGACATGATTTGAGATGTAGAAGCCATTTTT >In-frame_ENST00000406516_ENST00000437685_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(amino acids)=511AA_start in transcript=77_stop in transcript=1612 MRGAAVSPASSSPFPRSRDHVRAGGCSECQDSLTNWYYEKDGKLYCPKDYWGKFGEFCHGCSLLMTGPFMVAGEFKYHPECFACMSCKVI IEDGDAYALVQHATLYCGKCHNEVVLAPMFERLSTESVQEQLPYSVTLISMPATTEGRRGFSVSVESACSNYATTVQVKEVNRMHISPNN RNAIHPGDRILEINGTPVRTLRVEEVEDAISQTSQTLQLLIEHDPVSQRLDQLRLEARLAPHMQNAGHPHALSTLDTKENLEGTLRRRSL RRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSSYSQQIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFL TEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLRSMDPFPWQQKVRFAKGIASGMTKNRRCKLLPLVMAAPLSMEHGTVT -------------------------------------------------------------- >In-frame_ENST00000406516_ENST00000263201_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(transcript)=1745nt_BP=1352nt ATCCCGTTCGCGCCTGGGGCTGTGGTCTTCCCGCGCCTGAGGCGGCGGCGGCAGGAGCTGAGGGGAGTTGTAGGGAACTGAGGGGAGCTG CTGTGTCCCCCGCCTCCTCCTCCCCATTTCCGCGCTCCCGGGACCATGTCCGCGCTGGCGGGTGTTCAGAATGCCAGGATTCCCTCACCA ACTGGTACTATGAGAAGGATGGGAAGCTCTACTGCCCCAAGGACTACTGGGGGAAGTTTGGGGAGTTCTGTCATGGGTGCTCCCTGCTGA TGACAGGGCCTTTTATGGTGGCTGGGGAGTTCAAGTACCACCCAGAGTGCTTTGCCTGTATGAGCTGCAAGGTGATCATTGAGGATGGGG ATGCATATGCACTGGTGCAGCATGCCACCCTCTACTGTGGGAAGTGCCACAATGAGGTGGTGCTGGCACCCATGTTTGAGAGACTCTCCA CAGAGTCTGTTCAGGAGCAGCTGCCCTACTCTGTCACGCTCATCTCCATGCCGGCCACCACTGAAGGCAGGCGGGGCTTCTCCGTGTCCG TGGAGAGTGCCTGCTCCAACTACGCCACCACTGTGCAAGTGAAAGAGGTCAACCGGATGCACATCAGTCCCAACAATCGAAACGCCATCC ACCCTGGGGACCGCATCCTGGAGATCAATGGGACCCCCGTCCGCACACTTCGAGTGGAGGAGGTGGAGGATGCAATTAGCCAGACGAGCC AGACACTTCAGCTGTTGATTGAACATGACCCCGTCTCCCAACGCCTGGACCAGCTGCGGCTGGAGGCCCGGCTCGCTCCTCACATGCAGA ATGCCGGACACCCCCACGCCCTCAGCACCCTGGACACCAAGGAGAATCTGGAGGGGACACTGAGGAGACGTTCCCTAAGGCGCAGTAACA GTATCTCCAAGTCCCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGTTCAGCCGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCA GCAGCTATTCACAGCAGATCTTCCGGCCCTGTGACCTAATCCATGGGGAGGTCCTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGA CACACAAAGCCACGGGCAAAGTGATGGTCATGAAAGAGTTAATTCGATGTGATGAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAG TGATGCGCAGCCTGGACCACCCCAATGTGCTCAAGTTCATTGGTGTGCTGTACAAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTG AGGGGGGCACACTGAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCTGGCAGCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAA TGACAAAGAACCGGCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCCCCCTGAGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCC CCCCAGAGACCGACAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGTTTGAGAAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACA ACCATTTTGACCTCTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCAAGTTTCTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTG ATTCTTCCAGAATGACCTTCTTATTTATGTAACTGGCTTTCATTTAGATTGTAAGTTATGGACATGATTTGAGATGTAGAAGCCATTTTT >In-frame_ENST00000406516_ENST00000263201_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(amino acids)=511AA_start in transcript=77_stop in transcript=1612 MRGAAVSPASSSPFPRSRDHVRAGGCSECQDSLTNWYYEKDGKLYCPKDYWGKFGEFCHGCSLLMTGPFMVAGEFKYHPECFACMSCKVI IEDGDAYALVQHATLYCGKCHNEVVLAPMFERLSTESVQEQLPYSVTLISMPATTEGRRGFSVSVESACSNYATTVQVKEVNRMHISPNN RNAIHPGDRILEINGTPVRTLRVEEVEDAISQTSQTLQLLIEHDPVSQRLDQLRLEARLAPHMQNAGHPHALSTLDTKENLEGTLRRRSL RRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSSYSQQIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFL TEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLRSMDPFPWQQKVRFAKGIASGMTKNRRCKLLPLVMAAPLSMEHGTVT -------------------------------------------------------------- >In-frame_ENST00000444929_ENST00000407835_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(transcript)=1103nt_BP=709nt GTTCGCGCCTGGGGCTGTGGTCTTCCCGCGCCTGAGGCGGCGGCGGCAGGAGCTGAGGGGAGTTGTAGGGAACTGAGGGGAGCTGCTGTG TCCCCCGCCTCCTCCTCCCCATTTCCGCGCTCCCGGGACCATGTCCGCGCTGGCGGGTGAAGATGTCTGGAGGTGTCCAGGCTGTGGGGA CCACATTGCTCCAAGCCAGATATGGTACAGGACTGTCAACGAAACCTGGCACGGCTCTTGCTTCCGGCGCAGTAACAGTATCTCCAAGTC CCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGTTCAGCCGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCAGCAGCTATTCACA GCAGATCTTCCGGCCCTGTGACCTAATCCATGGGGAGGTCCTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGACACACAAAGCCAC GGGCAAAGTGATGGTCATGAAAGAGTTAATTCGATGTGATGAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAGTGATGCGCAGCCT GGACCACCCCAATGTGCTCAAGTTCATTGGTGTGCTGTACAAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTGAGGGGGGCACACT GAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCTGGCAGCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAATGACAAAGAACCG GCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCCCCCTGAGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCCCCCCAGAGACCGA CAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGTTTGAGAAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACAACCATTTTGACCT CTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCAAGTTTCTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTGATTCTTCCAGAAT GACCTTCTTATTTATGTAACTGGCTTTCATTTAGATTGTAAGTTATGGACATGATTTGAGATGTAGAAGCCATTTTTTATTAAATAAAAT >In-frame_ENST00000444929_ENST00000407835_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(amino acids)=295AA_start in transcript=82_stop in transcript=969 MLCPPPPPPHFRAPGTMSALAGEDVWRCPGCGDHIAPSQIWYRTVNETWHGSCFRRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSS YSQQIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEG GTLKDFLRSMDPFPWQQKVRFAKGIASGMTKNRRCKLLPLVMAAPLSMEHGTVTVVGIPPETDSSDRKNFFGRAFEKAAESTSSRMLHNH -------------------------------------------------------------- >In-frame_ENST00000444929_ENST00000437685_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(transcript)=1102nt_BP=709nt GTTCGCGCCTGGGGCTGTGGTCTTCCCGCGCCTGAGGCGGCGGCGGCAGGAGCTGAGGGGAGTTGTAGGGAACTGAGGGGAGCTGCTGTG TCCCCCGCCTCCTCCTCCCCATTTCCGCGCTCCCGGGACCATGTCCGCGCTGGCGGGTGAAGATGTCTGGAGGTGTCCAGGCTGTGGGGA CCACATTGCTCCAAGCCAGATATGGTACAGGACTGTCAACGAAACCTGGCACGGCTCTTGCTTCCGGCGCAGTAACAGTATCTCCAAGTC CCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGTTCAGCCGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCAGCAGCTATTCACA GCAGATCTTCCGGCCCTGTGACCTAATCCATGGGGAGGTCCTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGACACACAAAGCCAC GGGCAAAGTGATGGTCATGAAAGAGTTAATTCGATGTGATGAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAGTGATGCGCAGCCT GGACCACCCCAATGTGCTCAAGTTCATTGGTGTGCTGTACAAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTGAGGGGGGCACACT GAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCTGGCAGCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAATGACAAAGAACCG GCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCCCCCTGAGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCCCCCCAGAGACCGA CAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGTTTGAGAAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACAACCATTTTGACCT CTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCAAGTTTCTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTGATTCTTCCAGAAT GACCTTCTTATTTATGTAACTGGCTTTCATTTAGATTGTAAGTTATGGACATGATTTGAGATGTAGAAGCCATTTTTTATTAAATAAAAT >In-frame_ENST00000444929_ENST00000437685_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(amino acids)=295AA_start in transcript=82_stop in transcript=969 MLCPPPPPPHFRAPGTMSALAGEDVWRCPGCGDHIAPSQIWYRTVNETWHGSCFRRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSS YSQQIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEG GTLKDFLRSMDPFPWQQKVRFAKGIASGMTKNRRCKLLPLVMAAPLSMEHGTVTVVGIPPETDSSDRKNFFGRAFEKAAESTSSRMLHNH -------------------------------------------------------------- >In-frame_ENST00000444929_ENST00000263201_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(transcript)=1102nt_BP=709nt GTTCGCGCCTGGGGCTGTGGTCTTCCCGCGCCTGAGGCGGCGGCGGCAGGAGCTGAGGGGAGTTGTAGGGAACTGAGGGGAGCTGCTGTG TCCCCCGCCTCCTCCTCCCCATTTCCGCGCTCCCGGGACCATGTCCGCGCTGGCGGGTGAAGATGTCTGGAGGTGTCCAGGCTGTGGGGA CCACATTGCTCCAAGCCAGATATGGTACAGGACTGTCAACGAAACCTGGCACGGCTCTTGCTTCCGGCGCAGTAACAGTATCTCCAAGTC CCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGTTCAGCCGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCAGCAGCTATTCACA GCAGATCTTCCGGCCCTGTGACCTAATCCATGGGGAGGTCCTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGACACACAAAGCCAC GGGCAAAGTGATGGTCATGAAAGAGTTAATTCGATGTGATGAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAGTGATGCGCAGCCT GGACCACCCCAATGTGCTCAAGTTCATTGGTGTGCTGTACAAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTGAGGGGGGCACACT GAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCTGGCAGCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAATGACAAAGAACCG GCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCCCCCTGAGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCCCCCCAGAGACCGA CAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGTTTGAGAAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACAACCATTTTGACCT CTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCAAGTTTCTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTGATTCTTCCAGAAT GACCTTCTTATTTATGTAACTGGCTTTCATTTAGATTGTAAGTTATGGACATGATTTGAGATGTAGAAGCCATTTTTTATTAAATAAAAT >In-frame_ENST00000444929_ENST00000263201_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(amino acids)=295AA_start in transcript=82_stop in transcript=969 MLCPPPPPPHFRAPGTMSALAGEDVWRCPGCGDHIAPSQIWYRTVNETWHGSCFRRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSS YSQQIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEG GTLKDFLRSMDPFPWQQKVRFAKGIASGMTKNRRCKLLPLVMAAPLSMEHGTVTVVGIPPETDSSDRKNFFGRAFEKAAESTSSRMLHNH -------------------------------------------------------------- >In-frame_ENST00000331728_ENST00000407835_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(transcript)=1825nt_BP=1431nt GTGGTCTTCCCGCGCCTGAGGCGGCGGCGGCAGGAGCTGAGGGGAGTTGTAGGGAACTGAGGGGAGCTGCTGTGTCCCCCGCCTCCTCCT CCCCATTTCCGCGCTCCCGGGACCATGTCCGCGCTGGCGGGTGAAGATGTCTGGAGGTGTCCAGGCTGTGGGGACCACATTGCTCCAAGC CAGATATGGTACAGGACTGTCAACGAAACCTGGCACGGCTCTTGCTTCCGGTGTTCAGAATGCCAGGATTCCCTCACCAACTGGTACTAT GAGAAGGATGGGAAGCTCTACTGCCCCAAGGACTACTGGGGGAAGTTTGGGGAGTTCTGTCATGGGTGCTCCCTGCTGATGACAGGGCCT TTTATGGTGGCTGGGGAGTTCAAGTACCACCCAGAGTGCTTTGCCTGTATGAGCTGCAAGGTGATCATTGAGGATGGGGATGCATATGCA CTGGTGCAGCATGCCACCCTCTACTGTGGGAAGTGCCACAATGAGGTGGTGCTGGCACCCATGTTTGAGAGACTCTCCACAGAGTCTGTT CAGGAGCAGCTGCCCTACTCTGTCACGCTCATCTCCATGCCGGCCACCACTGAAGGCAGGCGGGGCTTCTCCGTGTCCGTGGAGAGTGCC TGCTCCAACTACGCCACCACTGTGCAAGTGAAAGAGGTCAACCGGATGCACATCAGTCCCAACAATCGAAACGCCATCCACCCTGGGGAC CGCATCCTGGAGATCAATGGGACCCCCGTCCGCACACTTCGAGTGGAGGAGGTGGAGGATGCAATTAGCCAGACGAGCCAGACACTTCAG CTGTTGATTGAACATGACCCCGTCTCCCAACGCCTGGACCAGCTGCGGCTGGAGGCCCGGCTCGCTCCTCACATGCAGAATGCCGGACAC CCCCACGCCCTCAGCACCCTGGACACCAAGGAGAATCTGGAGGGGACACTGAGGAGACGTTCCCTAAGGCGCAGTAACAGTATCTCCAAG TCCCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGTTCAGCCGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCAGCAGCTATTCA CAGCAGATCTTCCGGCCCTGTGACCTAATCCATGGGGAGGTCCTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGACACACAAAGCC ACGGGCAAAGTGATGGTCATGAAAGAGTTAATTCGATGTGATGAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAGTGATGCGCAGC CTGGACCACCCCAATGTGCTCAAGTTCATTGGTGTGCTGTACAAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTGAGGGGGGCACA CTGAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCTGGCAGCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAATGACAAAGAAC CGGCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCCCCCTGAGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCCCCCCAGAGACC GACAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGTTTGAGAAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACAACCATTTTGAC CTCTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCAAGTTTCTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTGATTCTTCCAGA ATGACCTTCTTATTTATGTAACTGGCTTTCATTTAGATTGTAAGTTATGGACATGATTTGAGATGTAGAAGCCATTTTTTATTAAATAAA >In-frame_ENST00000331728_ENST00000407835_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(amino acids)=541AA_start in transcript=66_stop in transcript=1691 MLCPPPPPPHFRAPGTMSALAGEDVWRCPGCGDHIAPSQIWYRTVNETWHGSCFRCSECQDSLTNWYYEKDGKLYCPKDYWGKFGEFCHG CSLLMTGPFMVAGEFKYHPECFACMSCKVIIEDGDAYALVQHATLYCGKCHNEVVLAPMFERLSTESVQEQLPYSVTLISMPATTEGRRG FSVSVESACSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAISQTSQTLQLLIEHDPVSQRLDQLRLEARLA PHMQNAGHPHALSTLDTKENLEGTLRRRSLRRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSSYSQQIFRPCDLIHGEVLGKGFFGQ AIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLRSMDPFPWQQKVRFAKG IASGMTKNRRCKLLPLVMAAPLSMEHGTVTVVGIPPETDSSDRKNFFGRAFEKAAESTSSRMLHNHFDLSVIELKAEDRSKFLDALISLL -------------------------------------------------------------- >In-frame_ENST00000331728_ENST00000437685_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(transcript)=1824nt_BP=1431nt GTGGTCTTCCCGCGCCTGAGGCGGCGGCGGCAGGAGCTGAGGGGAGTTGTAGGGAACTGAGGGGAGCTGCTGTGTCCCCCGCCTCCTCCT CCCCATTTCCGCGCTCCCGGGACCATGTCCGCGCTGGCGGGTGAAGATGTCTGGAGGTGTCCAGGCTGTGGGGACCACATTGCTCCAAGC CAGATATGGTACAGGACTGTCAACGAAACCTGGCACGGCTCTTGCTTCCGGTGTTCAGAATGCCAGGATTCCCTCACCAACTGGTACTAT GAGAAGGATGGGAAGCTCTACTGCCCCAAGGACTACTGGGGGAAGTTTGGGGAGTTCTGTCATGGGTGCTCCCTGCTGATGACAGGGCCT TTTATGGTGGCTGGGGAGTTCAAGTACCACCCAGAGTGCTTTGCCTGTATGAGCTGCAAGGTGATCATTGAGGATGGGGATGCATATGCA CTGGTGCAGCATGCCACCCTCTACTGTGGGAAGTGCCACAATGAGGTGGTGCTGGCACCCATGTTTGAGAGACTCTCCACAGAGTCTGTT CAGGAGCAGCTGCCCTACTCTGTCACGCTCATCTCCATGCCGGCCACCACTGAAGGCAGGCGGGGCTTCTCCGTGTCCGTGGAGAGTGCC TGCTCCAACTACGCCACCACTGTGCAAGTGAAAGAGGTCAACCGGATGCACATCAGTCCCAACAATCGAAACGCCATCCACCCTGGGGAC CGCATCCTGGAGATCAATGGGACCCCCGTCCGCACACTTCGAGTGGAGGAGGTGGAGGATGCAATTAGCCAGACGAGCCAGACACTTCAG CTGTTGATTGAACATGACCCCGTCTCCCAACGCCTGGACCAGCTGCGGCTGGAGGCCCGGCTCGCTCCTCACATGCAGAATGCCGGACAC CCCCACGCCCTCAGCACCCTGGACACCAAGGAGAATCTGGAGGGGACACTGAGGAGACGTTCCCTAAGGCGCAGTAACAGTATCTCCAAG TCCCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGTTCAGCCGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCAGCAGCTATTCA CAGCAGATCTTCCGGCCCTGTGACCTAATCCATGGGGAGGTCCTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGACACACAAAGCC ACGGGCAAAGTGATGGTCATGAAAGAGTTAATTCGATGTGATGAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAGTGATGCGCAGC CTGGACCACCCCAATGTGCTCAAGTTCATTGGTGTGCTGTACAAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTGAGGGGGGCACA CTGAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCTGGCAGCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAATGACAAAGAAC CGGCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCCCCCTGAGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCCCCCCAGAGACC GACAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGTTTGAGAAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACAACCATTTTGAC CTCTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCAAGTTTCTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTGATTCTTCCAGA ATGACCTTCTTATTTATGTAACTGGCTTTCATTTAGATTGTAAGTTATGGACATGATTTGAGATGTAGAAGCCATTTTTTATTAAATAAA >In-frame_ENST00000331728_ENST00000437685_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(amino acids)=541AA_start in transcript=66_stop in transcript=1691 MLCPPPPPPHFRAPGTMSALAGEDVWRCPGCGDHIAPSQIWYRTVNETWHGSCFRCSECQDSLTNWYYEKDGKLYCPKDYWGKFGEFCHG CSLLMTGPFMVAGEFKYHPECFACMSCKVIIEDGDAYALVQHATLYCGKCHNEVVLAPMFERLSTESVQEQLPYSVTLISMPATTEGRRG FSVSVESACSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAISQTSQTLQLLIEHDPVSQRLDQLRLEARLA PHMQNAGHPHALSTLDTKENLEGTLRRRSLRRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSSYSQQIFRPCDLIHGEVLGKGFFGQ AIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLRSMDPFPWQQKVRFAKG IASGMTKNRRCKLLPLVMAAPLSMEHGTVTVVGIPPETDSSDRKNFFGRAFEKAAESTSSRMLHNHFDLSVIELKAEDRSKFLDALISLL -------------------------------------------------------------- >In-frame_ENST00000331728_ENST00000263201_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(transcript)=1824nt_BP=1431nt GTGGTCTTCCCGCGCCTGAGGCGGCGGCGGCAGGAGCTGAGGGGAGTTGTAGGGAACTGAGGGGAGCTGCTGTGTCCCCCGCCTCCTCCT CCCCATTTCCGCGCTCCCGGGACCATGTCCGCGCTGGCGGGTGAAGATGTCTGGAGGTGTCCAGGCTGTGGGGACCACATTGCTCCAAGC CAGATATGGTACAGGACTGTCAACGAAACCTGGCACGGCTCTTGCTTCCGGTGTTCAGAATGCCAGGATTCCCTCACCAACTGGTACTAT GAGAAGGATGGGAAGCTCTACTGCCCCAAGGACTACTGGGGGAAGTTTGGGGAGTTCTGTCATGGGTGCTCCCTGCTGATGACAGGGCCT TTTATGGTGGCTGGGGAGTTCAAGTACCACCCAGAGTGCTTTGCCTGTATGAGCTGCAAGGTGATCATTGAGGATGGGGATGCATATGCA CTGGTGCAGCATGCCACCCTCTACTGTGGGAAGTGCCACAATGAGGTGGTGCTGGCACCCATGTTTGAGAGACTCTCCACAGAGTCTGTT CAGGAGCAGCTGCCCTACTCTGTCACGCTCATCTCCATGCCGGCCACCACTGAAGGCAGGCGGGGCTTCTCCGTGTCCGTGGAGAGTGCC TGCTCCAACTACGCCACCACTGTGCAAGTGAAAGAGGTCAACCGGATGCACATCAGTCCCAACAATCGAAACGCCATCCACCCTGGGGAC CGCATCCTGGAGATCAATGGGACCCCCGTCCGCACACTTCGAGTGGAGGAGGTGGAGGATGCAATTAGCCAGACGAGCCAGACACTTCAG CTGTTGATTGAACATGACCCCGTCTCCCAACGCCTGGACCAGCTGCGGCTGGAGGCCCGGCTCGCTCCTCACATGCAGAATGCCGGACAC CCCCACGCCCTCAGCACCCTGGACACCAAGGAGAATCTGGAGGGGACACTGAGGAGACGTTCCCTAAGGCGCAGTAACAGTATCTCCAAG TCCCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGTTCAGCCGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCAGCAGCTATTCA CAGCAGATCTTCCGGCCCTGTGACCTAATCCATGGGGAGGTCCTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGACACACAAAGCC ACGGGCAAAGTGATGGTCATGAAAGAGTTAATTCGATGTGATGAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAGTGATGCGCAGC CTGGACCACCCCAATGTGCTCAAGTTCATTGGTGTGCTGTACAAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTGAGGGGGGCACA CTGAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCTGGCAGCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAATGACAAAGAAC CGGCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCCCCCTGAGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCCCCCCAGAGACC GACAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGTTTGAGAAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACAACCATTTTGAC CTCTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCAAGTTTCTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTGATTCTTCCAGA ATGACCTTCTTATTTATGTAACTGGCTTTCATTTAGATTGTAAGTTATGGACATGATTTGAGATGTAGAAGCCATTTTTTATTAAATAAA >In-frame_ENST00000331728_ENST00000263201_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(amino acids)=541AA_start in transcript=66_stop in transcript=1691 MLCPPPPPPHFRAPGTMSALAGEDVWRCPGCGDHIAPSQIWYRTVNETWHGSCFRCSECQDSLTNWYYEKDGKLYCPKDYWGKFGEFCHG CSLLMTGPFMVAGEFKYHPECFACMSCKVIIEDGDAYALVQHATLYCGKCHNEVVLAPMFERLSTESVQEQLPYSVTLISMPATTEGRRG FSVSVESACSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAISQTSQTLQLLIEHDPVSQRLDQLRLEARLA PHMQNAGHPHALSTLDTKENLEGTLRRRSLRRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSSYSQQIFRPCDLIHGEVLGKGFFGQ AIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLRSMDPFPWQQKVRFAKG IASGMTKNRRCKLLPLVMAAPLSMEHGTVTVVGIPPETDSSDRKNFFGRAFEKAAESTSSRMLHNHFDLSVIELKAEDRSKFLDALISLL -------------------------------------------------------------- >In-frame_ENST00000333611_ENST00000407835_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(transcript)=1963nt_BP=1569nt CTCAAGAATGCCAGTGTGTGTGTAGCCTCCACAGAGAGGTCGTTTTCTCGGAGTCCAGAGGGGCCGCCTGAGCTTCTGAGAACTAGGGAG GAGCCATCCCAGCCATGAGCCCCTGTGGGAATCTGCTGGGGGCCAAGTGGCCTGGAGTCCTCAGGCTCCCGCAGCTGCTCCGGAGGGAGA GGTGAGCTCAGGGCAGCCTGCCTGCAGCCAGAGGTGCCGGGAGCCCCGGGCCTGTCATGGTGGCCATCTACAGCCGGCCTGAGGCAGTCA CAGACGGATTTGCAGCTGAGCCTGTCTATCTGGTGTGGGAAGAAGATGGGGAGTTACTTGTCAGTCCCGGCTTACTTCACCTCCAGAGAC CTGTTTCGGTGTTCAGAATGCCAGGATTCCCTCACCAACTGGTACTATGAGAAGGATGGGAAGCTCTACTGCCCCAAGGACTACTGGGGG AAGTTTGGGGAGTTCTGTCATGGGTGCTCCCTGCTGATGACAGGGCCTTTTATGGTGGCTGGGGAGTTCAAGTACCACCCAGAGTGCTTT GCCTGTATGAGCTGCAAGGTGATCATTGAGGATGGGGATGCATATGCACTGGTGCAGCATGCCACCCTCTACTGTGGGAAGTGCCACAAT GAGGTGGTGCTGGCACCCATGTTTGAGAGACTCTCCACAGAGTCTGTTCAGGAGCAGCTGCCCTACTCTGTCACGCTCATCTCCATGCCG GCCACCACTGAAGGCAGGCGGGGCTTCTCCGTGTCCGTGGAGAGTGCCTGCTCCAACTACGCCACCACTGTGCAAGTGAAAGAGGTCAAC CGGATGCACATCAGTCCCAACAATCGAAACGCCATCCACCCTGGGGACCGCATCCTGGAGATCAATGGGACCCCCGTCCGCACACTTCGA GTGGAGGAGGTGGAGGATGCAATTAGCCAGACGAGCCAGACACTTCAGCTGTTGATTGAACATGACCCCGTCTCCCAACGCCTGGACCAG CTGCGGCTGGAGGCCCGGCTCGCTCCTCACATGCAGAATGCCGGACACCCCCACGCCCTCAGCACCCTGGACACCAAGGAGAATCTGGAG GGGACACTGAGGAGACGTTCCCTAAGGCGCAGTAACAGTATCTCCAAGTCCCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGTTCAGC CGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCAGCAGCTATTCACAGCAGATCTTCCGGCCCTGTGACCTAATCCATGGGGAGGTC CTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGACACACAAAGCCACGGGCAAAGTGATGGTCATGAAAGAGTTAATTCGATGTGAT GAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAGTGATGCGCAGCCTGGACCACCCCAATGTGCTCAAGTTCATTGGTGTGCTGTAC AAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTGAGGGGGGCACACTGAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCTGGCAG CAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAATGACAAAGAACCGGCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCCCCCTG AGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCCCCCCAGAGACCGACAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGTTTGAG AAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACAACCATTTTGACCTCTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCAAGTTT CTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTGATTCTTCCAGAATGACCTTCTTATTTATGTAACTGGCTTTCATTTAGATTGTA >In-frame_ENST00000333611_ENST00000407835_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(amino acids)=562AA_start in transcript=141_stop in transcript=1829 MESSGSRSCSGGRGELRAACLQPEVPGAPGLSWWPSTAGLRQSQTDLQLSLSIWCGKKMGSYLSVPAYFTSRDLFRCSECQDSLTNWYYE KDGKLYCPKDYWGKFGEFCHGCSLLMTGPFMVAGEFKYHPECFACMSCKVIIEDGDAYALVQHATLYCGKCHNEVVLAPMFERLSTESVQ EQLPYSVTLISMPATTEGRRGFSVSVESACSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAISQTSQTLQL LIEHDPVSQRLDQLRLEARLAPHMQNAGHPHALSTLDTKENLEGTLRRRSLRRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSSYSQ QIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTL KDFLRSMDPFPWQQKVRFAKGIASGMTKNRRCKLLPLVMAAPLSMEHGTVTVVGIPPETDSSDRKNFFGRAFEKAAESTSSRMLHNHFDL -------------------------------------------------------------- >In-frame_ENST00000333611_ENST00000437685_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(transcript)=1962nt_BP=1569nt CTCAAGAATGCCAGTGTGTGTGTAGCCTCCACAGAGAGGTCGTTTTCTCGGAGTCCAGAGGGGCCGCCTGAGCTTCTGAGAACTAGGGAG GAGCCATCCCAGCCATGAGCCCCTGTGGGAATCTGCTGGGGGCCAAGTGGCCTGGAGTCCTCAGGCTCCCGCAGCTGCTCCGGAGGGAGA GGTGAGCTCAGGGCAGCCTGCCTGCAGCCAGAGGTGCCGGGAGCCCCGGGCCTGTCATGGTGGCCATCTACAGCCGGCCTGAGGCAGTCA CAGACGGATTTGCAGCTGAGCCTGTCTATCTGGTGTGGGAAGAAGATGGGGAGTTACTTGTCAGTCCCGGCTTACTTCACCTCCAGAGAC CTGTTTCGGTGTTCAGAATGCCAGGATTCCCTCACCAACTGGTACTATGAGAAGGATGGGAAGCTCTACTGCCCCAAGGACTACTGGGGG AAGTTTGGGGAGTTCTGTCATGGGTGCTCCCTGCTGATGACAGGGCCTTTTATGGTGGCTGGGGAGTTCAAGTACCACCCAGAGTGCTTT GCCTGTATGAGCTGCAAGGTGATCATTGAGGATGGGGATGCATATGCACTGGTGCAGCATGCCACCCTCTACTGTGGGAAGTGCCACAAT GAGGTGGTGCTGGCACCCATGTTTGAGAGACTCTCCACAGAGTCTGTTCAGGAGCAGCTGCCCTACTCTGTCACGCTCATCTCCATGCCG GCCACCACTGAAGGCAGGCGGGGCTTCTCCGTGTCCGTGGAGAGTGCCTGCTCCAACTACGCCACCACTGTGCAAGTGAAAGAGGTCAAC CGGATGCACATCAGTCCCAACAATCGAAACGCCATCCACCCTGGGGACCGCATCCTGGAGATCAATGGGACCCCCGTCCGCACACTTCGA GTGGAGGAGGTGGAGGATGCAATTAGCCAGACGAGCCAGACACTTCAGCTGTTGATTGAACATGACCCCGTCTCCCAACGCCTGGACCAG CTGCGGCTGGAGGCCCGGCTCGCTCCTCACATGCAGAATGCCGGACACCCCCACGCCCTCAGCACCCTGGACACCAAGGAGAATCTGGAG GGGACACTGAGGAGACGTTCCCTAAGGCGCAGTAACAGTATCTCCAAGTCCCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGTTCAGC CGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCAGCAGCTATTCACAGCAGATCTTCCGGCCCTGTGACCTAATCCATGGGGAGGTC CTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGACACACAAAGCCACGGGCAAAGTGATGGTCATGAAAGAGTTAATTCGATGTGAT GAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAGTGATGCGCAGCCTGGACCACCCCAATGTGCTCAAGTTCATTGGTGTGCTGTAC AAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTGAGGGGGGCACACTGAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCTGGCAG CAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAATGACAAAGAACCGGCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCCCCCTG AGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCCCCCCAGAGACCGACAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGTTTGAG AAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACAACCATTTTGACCTCTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCAAGTTT CTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTGATTCTTCCAGAATGACCTTCTTATTTATGTAACTGGCTTTCATTTAGATTGTA >In-frame_ENST00000333611_ENST00000437685_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(amino acids)=562AA_start in transcript=141_stop in transcript=1829 MESSGSRSCSGGRGELRAACLQPEVPGAPGLSWWPSTAGLRQSQTDLQLSLSIWCGKKMGSYLSVPAYFTSRDLFRCSECQDSLTNWYYE KDGKLYCPKDYWGKFGEFCHGCSLLMTGPFMVAGEFKYHPECFACMSCKVIIEDGDAYALVQHATLYCGKCHNEVVLAPMFERLSTESVQ EQLPYSVTLISMPATTEGRRGFSVSVESACSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAISQTSQTLQL LIEHDPVSQRLDQLRLEARLAPHMQNAGHPHALSTLDTKENLEGTLRRRSLRRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSSYSQ QIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTL KDFLRSMDPFPWQQKVRFAKGIASGMTKNRRCKLLPLVMAAPLSMEHGTVTVVGIPPETDSSDRKNFFGRAFEKAAESTSSRMLHNHFDL -------------------------------------------------------------- >In-frame_ENST00000333611_ENST00000263201_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(transcript)=1962nt_BP=1569nt CTCAAGAATGCCAGTGTGTGTGTAGCCTCCACAGAGAGGTCGTTTTCTCGGAGTCCAGAGGGGCCGCCTGAGCTTCTGAGAACTAGGGAG GAGCCATCCCAGCCATGAGCCCCTGTGGGAATCTGCTGGGGGCCAAGTGGCCTGGAGTCCTCAGGCTCCCGCAGCTGCTCCGGAGGGAGA GGTGAGCTCAGGGCAGCCTGCCTGCAGCCAGAGGTGCCGGGAGCCCCGGGCCTGTCATGGTGGCCATCTACAGCCGGCCTGAGGCAGTCA CAGACGGATTTGCAGCTGAGCCTGTCTATCTGGTGTGGGAAGAAGATGGGGAGTTACTTGTCAGTCCCGGCTTACTTCACCTCCAGAGAC CTGTTTCGGTGTTCAGAATGCCAGGATTCCCTCACCAACTGGTACTATGAGAAGGATGGGAAGCTCTACTGCCCCAAGGACTACTGGGGG AAGTTTGGGGAGTTCTGTCATGGGTGCTCCCTGCTGATGACAGGGCCTTTTATGGTGGCTGGGGAGTTCAAGTACCACCCAGAGTGCTTT GCCTGTATGAGCTGCAAGGTGATCATTGAGGATGGGGATGCATATGCACTGGTGCAGCATGCCACCCTCTACTGTGGGAAGTGCCACAAT GAGGTGGTGCTGGCACCCATGTTTGAGAGACTCTCCACAGAGTCTGTTCAGGAGCAGCTGCCCTACTCTGTCACGCTCATCTCCATGCCG GCCACCACTGAAGGCAGGCGGGGCTTCTCCGTGTCCGTGGAGAGTGCCTGCTCCAACTACGCCACCACTGTGCAAGTGAAAGAGGTCAAC CGGATGCACATCAGTCCCAACAATCGAAACGCCATCCACCCTGGGGACCGCATCCTGGAGATCAATGGGACCCCCGTCCGCACACTTCGA GTGGAGGAGGTGGAGGATGCAATTAGCCAGACGAGCCAGACACTTCAGCTGTTGATTGAACATGACCCCGTCTCCCAACGCCTGGACCAG CTGCGGCTGGAGGCCCGGCTCGCTCCTCACATGCAGAATGCCGGACACCCCCACGCCCTCAGCACCCTGGACACCAAGGAGAATCTGGAG GGGACACTGAGGAGACGTTCCCTAAGGCGCAGTAACAGTATCTCCAAGTCCCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGTTCAGC CGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCAGCAGCTATTCACAGCAGATCTTCCGGCCCTGTGACCTAATCCATGGGGAGGTC CTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGACACACAAAGCCACGGGCAAAGTGATGGTCATGAAAGAGTTAATTCGATGTGAT GAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAGTGATGCGCAGCCTGGACCACCCCAATGTGCTCAAGTTCATTGGTGTGCTGTAC AAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTGAGGGGGGCACACTGAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCTGGCAG CAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAATGACAAAGAACCGGCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCCCCCTG AGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCCCCCCAGAGACCGACAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGTTTGAG AAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACAACCATTTTGACCTCTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCAAGTTT CTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTGATTCTTCCAGAATGACCTTCTTATTTATGTAACTGGCTTTCATTTAGATTGTA >In-frame_ENST00000333611_ENST00000263201_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(amino acids)=562AA_start in transcript=141_stop in transcript=1829 MESSGSRSCSGGRGELRAACLQPEVPGAPGLSWWPSTAGLRQSQTDLQLSLSIWCGKKMGSYLSVPAYFTSRDLFRCSECQDSLTNWYYE KDGKLYCPKDYWGKFGEFCHGCSLLMTGPFMVAGEFKYHPECFACMSCKVIIEDGDAYALVQHATLYCGKCHNEVVLAPMFERLSTESVQ EQLPYSVTLISMPATTEGRRGFSVSVESACSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAISQTSQTLQL LIEHDPVSQRLDQLRLEARLAPHMQNAGHPHALSTLDTKENLEGTLRRRSLRRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSSYSQ QIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTL KDFLRSMDPFPWQQKVRFAKGIASGMTKNRRCKLLPLVMAAPLSMEHGTVTVVGIPPETDSSDRKNFFGRAFEKAAESTSSRMLHNHFDL -------------------------------------------------------------- >In-frame_ENST00000340552_ENST00000407835_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(transcript)=1878nt_BP=1484nt GGGAGGAGCCATCCCAGCCATGAGCCCCTGTGGGAATCTGCTGGGGGCCAAGTGGCCTGGAGTCCTCAGGCTCCCGCAGCTGCTCCGGAG GGAGAGGTGAGCTCAGGGCAGCCTGCCTGCAGCCAGAGGTGCCGGGAGCCCCGGGCCTGTCATGGTGGCCATCTACAGCCGGCCTGAGGC AGTCACAGACGGATTTGCAGCTGAGCCTGTCTATCTGGTGTGGGAAGAAGATGGGGAGTTACTTGTCAGTCCCGGCTTACTTCACCTCCA GAGACCTGTTTCGGTGTTCAGAATGCCAGGATTCCCTCACCAACTGGTACTATGAGAAGGATGGGAAGCTCTACTGCCCCAAGGACTACT GGGGGAAGTTTGGGGAGTTCTGTCATGGGTGCTCCCTGCTGATGACAGGGCCTTTTATGGTGGCTGGGGAGTTCAAGTACCACCCAGAGT GCTTTGCCTGTATGAGCTGCAAGGTGATCATTGAGGATGGGGATGCATATGCACTGGTGCAGCATGCCACCCTCTACTGTGGGAAGTGCC ACAATGAGGTGGTGCTGGCACCCATGTTTGAGAGACTCTCCACAGAGTCTGTTCAGGAGCAGCTGCCCTACTCTGTCACGCTCATCTCCA TGCCGGCCACCACTGAAGGCAGGCGGGGCTTCTCCGTGTCCGTGGAGAGTGCCTGCTCCAACTACGCCACCACTGTGCAAGTGAAAGAGG TCAACCGGATGCACATCAGTCCCAACAATCGAAACGCCATCCACCCTGGGGACCGCATCCTGGAGATCAATGGGACCCCCGTCCGCACAC TTCGAGTGGAGGAGGTGGAGGATGCAATTAGCCAGACGAGCCAGACACTTCAGCTGTTGATTGAACATGACCCCGTCTCCCAACGCCTGG ACCAGCTGCGGCTGGAGGCCCGGCTCGCTCCTCACATGCAGAATGCCGGACACCCCCACGCCCTCAGCACCCTGGACACCAAGGAGAATC TGGAGGGGACACTGAGGAGACGTTCCCTAAGGCGCAGTAACAGTATCTCCAAGTCCCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGT TCAGCCGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCAGCAGCTATTCACAGCAGATCTTCCGGCCCTGTGACCTAATCCATGGGG AGGTCCTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGACACACAAAGCCACGGGCAAAGTGATGGTCATGAAAGAGTTAATTCGAT GTGATGAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAGTGATGCGCAGCCTGGACCACCCCAATGTGCTCAAGTTCATTGGTGTGC TGTACAAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTGAGGGGGGCACACTGAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCT GGCAGCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAATGACAAAGAACCGGCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCC CCCTGAGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCCCCCCAGAGACCGACAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGT TTGAGAAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACAACCATTTTGACCTCTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCA AGTTTCTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTGATTCTTCCAGAATGACCTTCTTATTTATGTAACTGGCTTTCATTTAGA >In-frame_ENST00000340552_ENST00000407835_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(amino acids)=562AA_start in transcript=56_stop in transcript=1744 MESSGSRSCSGGRGELRAACLQPEVPGAPGLSWWPSTAGLRQSQTDLQLSLSIWCGKKMGSYLSVPAYFTSRDLFRCSECQDSLTNWYYE KDGKLYCPKDYWGKFGEFCHGCSLLMTGPFMVAGEFKYHPECFACMSCKVIIEDGDAYALVQHATLYCGKCHNEVVLAPMFERLSTESVQ EQLPYSVTLISMPATTEGRRGFSVSVESACSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAISQTSQTLQL LIEHDPVSQRLDQLRLEARLAPHMQNAGHPHALSTLDTKENLEGTLRRRSLRRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSSYSQ QIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTL KDFLRSMDPFPWQQKVRFAKGIASGMTKNRRCKLLPLVMAAPLSMEHGTVTVVGIPPETDSSDRKNFFGRAFEKAAESTSSRMLHNHFDL -------------------------------------------------------------- >In-frame_ENST00000340552_ENST00000437685_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(transcript)=1877nt_BP=1484nt GGGAGGAGCCATCCCAGCCATGAGCCCCTGTGGGAATCTGCTGGGGGCCAAGTGGCCTGGAGTCCTCAGGCTCCCGCAGCTGCTCCGGAG GGAGAGGTGAGCTCAGGGCAGCCTGCCTGCAGCCAGAGGTGCCGGGAGCCCCGGGCCTGTCATGGTGGCCATCTACAGCCGGCCTGAGGC AGTCACAGACGGATTTGCAGCTGAGCCTGTCTATCTGGTGTGGGAAGAAGATGGGGAGTTACTTGTCAGTCCCGGCTTACTTCACCTCCA GAGACCTGTTTCGGTGTTCAGAATGCCAGGATTCCCTCACCAACTGGTACTATGAGAAGGATGGGAAGCTCTACTGCCCCAAGGACTACT GGGGGAAGTTTGGGGAGTTCTGTCATGGGTGCTCCCTGCTGATGACAGGGCCTTTTATGGTGGCTGGGGAGTTCAAGTACCACCCAGAGT GCTTTGCCTGTATGAGCTGCAAGGTGATCATTGAGGATGGGGATGCATATGCACTGGTGCAGCATGCCACCCTCTACTGTGGGAAGTGCC ACAATGAGGTGGTGCTGGCACCCATGTTTGAGAGACTCTCCACAGAGTCTGTTCAGGAGCAGCTGCCCTACTCTGTCACGCTCATCTCCA TGCCGGCCACCACTGAAGGCAGGCGGGGCTTCTCCGTGTCCGTGGAGAGTGCCTGCTCCAACTACGCCACCACTGTGCAAGTGAAAGAGG TCAACCGGATGCACATCAGTCCCAACAATCGAAACGCCATCCACCCTGGGGACCGCATCCTGGAGATCAATGGGACCCCCGTCCGCACAC TTCGAGTGGAGGAGGTGGAGGATGCAATTAGCCAGACGAGCCAGACACTTCAGCTGTTGATTGAACATGACCCCGTCTCCCAACGCCTGG ACCAGCTGCGGCTGGAGGCCCGGCTCGCTCCTCACATGCAGAATGCCGGACACCCCCACGCCCTCAGCACCCTGGACACCAAGGAGAATC TGGAGGGGACACTGAGGAGACGTTCCCTAAGGCGCAGTAACAGTATCTCCAAGTCCCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGT TCAGCCGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCAGCAGCTATTCACAGCAGATCTTCCGGCCCTGTGACCTAATCCATGGGG AGGTCCTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGACACACAAAGCCACGGGCAAAGTGATGGTCATGAAAGAGTTAATTCGAT GTGATGAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAGTGATGCGCAGCCTGGACCACCCCAATGTGCTCAAGTTCATTGGTGTGC TGTACAAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTGAGGGGGGCACACTGAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCT GGCAGCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAATGACAAAGAACCGGCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCC CCCTGAGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCCCCCCAGAGACCGACAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGT TTGAGAAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACAACCATTTTGACCTCTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCA AGTTTCTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTGATTCTTCCAGAATGACCTTCTTATTTATGTAACTGGCTTTCATTTAGA >In-frame_ENST00000340552_ENST00000437685_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(amino acids)=562AA_start in transcript=56_stop in transcript=1744 MESSGSRSCSGGRGELRAACLQPEVPGAPGLSWWPSTAGLRQSQTDLQLSLSIWCGKKMGSYLSVPAYFTSRDLFRCSECQDSLTNWYYE KDGKLYCPKDYWGKFGEFCHGCSLLMTGPFMVAGEFKYHPECFACMSCKVIIEDGDAYALVQHATLYCGKCHNEVVLAPMFERLSTESVQ EQLPYSVTLISMPATTEGRRGFSVSVESACSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAISQTSQTLQL LIEHDPVSQRLDQLRLEARLAPHMQNAGHPHALSTLDTKENLEGTLRRRSLRRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSSYSQ QIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTL KDFLRSMDPFPWQQKVRFAKGIASGMTKNRRCKLLPLVMAAPLSMEHGTVTVVGIPPETDSSDRKNFFGRAFEKAAESTSSRMLHNHFDL -------------------------------------------------------------- >In-frame_ENST00000340552_ENST00000263201_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(transcript)=1877nt_BP=1484nt GGGAGGAGCCATCCCAGCCATGAGCCCCTGTGGGAATCTGCTGGGGGCCAAGTGGCCTGGAGTCCTCAGGCTCCCGCAGCTGCTCCGGAG GGAGAGGTGAGCTCAGGGCAGCCTGCCTGCAGCCAGAGGTGCCGGGAGCCCCGGGCCTGTCATGGTGGCCATCTACAGCCGGCCTGAGGC AGTCACAGACGGATTTGCAGCTGAGCCTGTCTATCTGGTGTGGGAAGAAGATGGGGAGTTACTTGTCAGTCCCGGCTTACTTCACCTCCA GAGACCTGTTTCGGTGTTCAGAATGCCAGGATTCCCTCACCAACTGGTACTATGAGAAGGATGGGAAGCTCTACTGCCCCAAGGACTACT GGGGGAAGTTTGGGGAGTTCTGTCATGGGTGCTCCCTGCTGATGACAGGGCCTTTTATGGTGGCTGGGGAGTTCAAGTACCACCCAGAGT GCTTTGCCTGTATGAGCTGCAAGGTGATCATTGAGGATGGGGATGCATATGCACTGGTGCAGCATGCCACCCTCTACTGTGGGAAGTGCC ACAATGAGGTGGTGCTGGCACCCATGTTTGAGAGACTCTCCACAGAGTCTGTTCAGGAGCAGCTGCCCTACTCTGTCACGCTCATCTCCA TGCCGGCCACCACTGAAGGCAGGCGGGGCTTCTCCGTGTCCGTGGAGAGTGCCTGCTCCAACTACGCCACCACTGTGCAAGTGAAAGAGG TCAACCGGATGCACATCAGTCCCAACAATCGAAACGCCATCCACCCTGGGGACCGCATCCTGGAGATCAATGGGACCCCCGTCCGCACAC TTCGAGTGGAGGAGGTGGAGGATGCAATTAGCCAGACGAGCCAGACACTTCAGCTGTTGATTGAACATGACCCCGTCTCCCAACGCCTGG ACCAGCTGCGGCTGGAGGCCCGGCTCGCTCCTCACATGCAGAATGCCGGACACCCCCACGCCCTCAGCACCCTGGACACCAAGGAGAATC TGGAGGGGACACTGAGGAGACGTTCCCTAAGGCGCAGTAACAGTATCTCCAAGTCCCCTGGCCCCAGCTCCCCAAAGGAGCCCCTGCTGT TCAGCCGTGACATCAGCCGCTCAGAATCCCTTCGTTGTTCCAGCAGCTATTCACAGCAGATCTTCCGGCCCTGTGACCTAATCCATGGGG AGGTCCTGGGGAAGGGCTTCTTTGGGCAGGCTATCAAGGTGACACACAAAGCCACGGGCAAAGTGATGGTCATGAAAGAGTTAATTCGAT GTGATGAGGAGACCCAGAAAACTTTTCTGACTGAGGTGAAAGTGATGCGCAGCCTGGACCACCCCAATGTGCTCAAGTTCATTGGTGTGC TGTACAAGGATAAGAAGCTGAACCTCCTGACAGAGTACATTGAGGGGGGCACACTGAAGGACTTTCTGCGCAGTATGGATCCGTTCCCCT GGCAGCAGAAGGTCAGGTTTGCCAAAGGAATCGCCTCCGGAATGACAAAGAACCGGCGCTGCAAACTGCTGCCCCTGGTGATGGCTGCCC CCCTGAGCATGGAGCATGGCACAGTGACCGTGGTGGGCATCCCCCCAGAGACCGACAGCTCGGACAGGAAGAACTTTTTTGGGAGGGCGT TTGAGAAGGCAGCGGAAAGCACCAGCTCCCGGATGCTGCACAACCATTTTGACCTCTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCA AGTTTCTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTGATTCTTCCAGAATGACCTTCTTATTTATGTAACTGGCTTTCATTTAGA >In-frame_ENST00000340552_ENST00000263201_TCGA-DK-A3IN_LIMK2_chr22_31664186_+_CDC45_chr22_19504049_length(amino acids)=562AA_start in transcript=56_stop in transcript=1744 MESSGSRSCSGGRGELRAACLQPEVPGAPGLSWWPSTAGLRQSQTDLQLSLSIWCGKKMGSYLSVPAYFTSRDLFRCSECQDSLTNWYYE KDGKLYCPKDYWGKFGEFCHGCSLLMTGPFMVAGEFKYHPECFACMSCKVIIEDGDAYALVQHATLYCGKCHNEVVLAPMFERLSTESVQ EQLPYSVTLISMPATTEGRRGFSVSVESACSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAISQTSQTLQL LIEHDPVSQRLDQLRLEARLAPHMQNAGHPHALSTLDTKENLEGTLRRRSLRRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSSYSQ QIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTL KDFLRSMDPFPWQQKVRFAKGIASGMTKNRRCKLLPLVMAAPLSMEHGTVTVVGIPPETDSSDRKNFFGRAFEKAAESTSSRMLHNHFDL -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for LIMK2-CDC45 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for LIMK2-CDC45 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for LIMK2-CDC45 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | LIMK2 | C0023893 | Liver Cirrhosis, Experimental | 1 | CTD_human |
Tgene | CDC45 | C4310738 | MEIER-GORLIN SYNDROME 7 | 2 | GENOMICS_ENGLAND;UNIPROT |
Tgene | CDC45 | C1868684 | EAR, PATELLA, SHORT STATURE SYNDROME | 1 | CTD_human;ORPHANET |
Tgene | CDC45 | C2239176 | Liver carcinoma | 1 | CTD_human |
Tgene | CDC45 | C4280330 | Coronal synostosis | 1 | GENOMICS_ENGLAND |