|
Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:LRBA-RXFP1 (FusionGDB2 ID:49376) |
Fusion Gene Summary for LRBA-RXFP1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: LRBA-RXFP1 | Fusion gene ID: 49376 | Hgene | Tgene | Gene symbol | LRBA | RXFP1 | Gene ID | 987 | 59350 |
Gene name | LPS responsive beige-like anchor protein | relaxin family peptide receptor 1 | |
Synonyms | BGL|CDC4L|CVID8|LAB300|LBA | LGR7|RXFPR1 | |
Cytomap | 4q31.3 | 4q32.1 | |
Type of gene | protein-coding | protein-coding | |
Description | lipopolysaccharide-responsive and beige-like anchor proteinCDC4-like proteinLPS-responsive vesicle trafficking, beach and anchor containingvesicle trafficking, beach and anchor containing | relaxin receptor 1leucine-rich repeat-containing G protein-coupled receptor 7relaxin/insulin like family peptide receptor 1 | |
Modification date | 20200320 | 20200313 | |
UniProtAcc | P50851 | . | |
Ensembl transtripts involved in fusion gene | ENST00000535741, ENST00000510413, ENST00000503716, ENST00000357115, ENST00000507224, | ENST00000460056, ENST00000307765, ENST00000423548, ENST00000448688, ENST00000343542, ENST00000470033, ENST00000472969, | |
Fusion gene scores | * DoF score | 31 X 32 X 15=14880 | 2 X 3 X 3=18 |
# samples | 41 | 3 | |
** MAII score | log2(41/14880*10)=-5.18160680648995 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/18*10)=0.736965594166206 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: LRBA [Title/Abstract] AND RXFP1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | LRBA(151509200)-RXFP1(159549790), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | LRBA-RXFP1 seems lost the major protein functional domain in Tgene partner, which is a IUPHAR drug target due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene breakpoints across LRBA (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across RXFP1 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | BLCA | TCGA-GD-A2C5-01A | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
Top |
Fusion Gene ORF analysis for LRBA-RXFP1 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000535741 | ENST00000460056 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
Frame-shift | ENST00000535741 | ENST00000307765 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
5CDS-intron | ENST00000535741 | ENST00000423548 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
5CDS-intron | ENST00000535741 | ENST00000448688 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
5CDS-intron | ENST00000535741 | ENST00000343542 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
5CDS-intron | ENST00000535741 | ENST00000470033 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
5CDS-intron | ENST00000535741 | ENST00000472969 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
In-frame | ENST00000510413 | ENST00000460056 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
In-frame | ENST00000510413 | ENST00000307765 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
5CDS-intron | ENST00000510413 | ENST00000423548 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
5CDS-intron | ENST00000510413 | ENST00000448688 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
5CDS-intron | ENST00000510413 | ENST00000343542 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
5CDS-intron | ENST00000510413 | ENST00000470033 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
5CDS-intron | ENST00000510413 | ENST00000472969 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
intron-3CDS | ENST00000503716 | ENST00000460056 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
intron-3CDS | ENST00000503716 | ENST00000307765 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
intron-intron | ENST00000503716 | ENST00000423548 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
intron-intron | ENST00000503716 | ENST00000448688 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
intron-intron | ENST00000503716 | ENST00000343542 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
intron-intron | ENST00000503716 | ENST00000470033 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
intron-intron | ENST00000503716 | ENST00000472969 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
Frame-shift | ENST00000357115 | ENST00000460056 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
Frame-shift | ENST00000357115 | ENST00000307765 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
5CDS-intron | ENST00000357115 | ENST00000423548 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
5CDS-intron | ENST00000357115 | ENST00000448688 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
5CDS-intron | ENST00000357115 | ENST00000343542 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
5CDS-intron | ENST00000357115 | ENST00000470033 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
5CDS-intron | ENST00000357115 | ENST00000472969 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
In-frame | ENST00000507224 | ENST00000460056 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
In-frame | ENST00000507224 | ENST00000307765 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
5CDS-intron | ENST00000507224 | ENST00000423548 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
5CDS-intron | ENST00000507224 | ENST00000448688 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
5CDS-intron | ENST00000507224 | ENST00000343542 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
5CDS-intron | ENST00000507224 | ENST00000470033 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
5CDS-intron | ENST00000507224 | ENST00000472969 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000510413 | LRBA | chr4 | 151509200 | - | ENST00000460056 | RXFP1 | chr4 | 159549790 | + | 8219 | 6615 | 285 | 6638 | 2117 |
ENST00000510413 | LRBA | chr4 | 151509200 | - | ENST00000307765 | RXFP1 | chr4 | 159549790 | + | 9379 | 6615 | 285 | 6638 | 2117 |
ENST00000507224 | LRBA | chr4 | 151509200 | - | ENST00000460056 | RXFP1 | chr4 | 159549790 | + | 8229 | 6625 | 295 | 6648 | 2117 |
ENST00000507224 | LRBA | chr4 | 151509200 | - | ENST00000307765 | RXFP1 | chr4 | 159549790 | + | 9389 | 6625 | 295 | 6648 | 2117 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000510413 | ENST00000460056 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + | 0.000559541 | 0.9994405 |
ENST00000510413 | ENST00000307765 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + | 0.000383352 | 0.9996166 |
ENST00000507224 | ENST00000460056 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + | 0.00056698 | 0.999433 |
ENST00000507224 | ENST00000307765 | LRBA | chr4 | 151509200 | - | RXFP1 | chr4 | 159549790 | + | 0.000388124 | 0.9996119 |
Top |
Fusion Genomic Features for LRBA-RXFP1 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
LRBA | chr4 | 151509199 | - | RXFP1 | chr4 | 159549789 | + | 0.003327323 | 0.99667263 |
LRBA | chr4 | 151509199 | - | RXFP1 | chr4 | 159549789 | + | 0.003327323 | 0.99667263 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
Top |
Fusion Protein Features for LRBA-RXFP1 |
Go to FGviewer for the breakpoints of chr4:151509200-chr4:159549790 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
LRBA | . |
FUNCTION: May be involved in coupling signal transduction and vesicle trafficking to enable polarized secretion and/or membrane deposition of immune effector molecules. {ECO:0000250}. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | LRBA | chr4:151509200 | chr4:159549790 | ENST00000357115 | - | 41 | 58 | 1006_1053 | 2121.0 | 2864.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | LRBA | chr4:151509200 | chr4:159549790 | ENST00000510413 | - | 40 | 57 | 1006_1053 | 2110.0 | 2852.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | LRBA | chr4:151509200 | chr4:159549790 | ENST00000357115 | - | 41 | 58 | 1990_1994 | 2121.0 | 2864.0 | Compositional bias | Note=Poly-Arg |
Hgene | LRBA | chr4:151509200 | chr4:159549790 | ENST00000510413 | - | 40 | 57 | 1990_1994 | 2110.0 | 2852.0 | Compositional bias | Note=Poly-Arg |
Hgene | LRBA | chr4:151509200 | chr4:159549790 | ENST00000357115 | - | 41 | 58 | 1301_1343 | 2121.0 | 2864.0 | Repeat | Note=WD 1 |
Hgene | LRBA | chr4:151509200 | chr4:159549790 | ENST00000510413 | - | 40 | 57 | 1301_1343 | 2110.0 | 2852.0 | Repeat | Note=WD 1 |
Hgene | LRBA | chr4:151509200 | chr4:159549790 | ENST00000357115 | - | 41 | 58 | 1531_1548 | 2121.0 | 2864.0 | Transmembrane | Helical |
Hgene | LRBA | chr4:151509200 | chr4:159549790 | ENST00000510413 | - | 40 | 57 | 1531_1548 | 2110.0 | 2852.0 | Transmembrane | Helical |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000423548 | 0 | 7 | 26_63 | 0 | 190.0 | Domain | LDL-receptor class A | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000423548 | 0 | 7 | 91_127 | 0 | 190.0 | Domain | Note=LRRNT | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000307765 | 9 | 18 | 296_317 | 275.6666666666667 | 758.0 | Repeat | Note=LRR 7 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000307765 | 9 | 18 | 320_341 | 275.6666666666667 | 758.0 | Repeat | Note=LRR 8 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000307765 | 9 | 18 | 344_365 | 275.6666666666667 | 758.0 | Repeat | Note=LRR 9 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000343542 | 9 | 16 | 296_317 | 275.6666666666667 | 710.0 | Repeat | Note=LRR 7 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000343542 | 9 | 16 | 320_341 | 275.6666666666667 | 710.0 | Repeat | Note=LRR 8 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000343542 | 9 | 16 | 344_365 | 275.6666666666667 | 710.0 | Repeat | Note=LRR 9 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000423548 | 0 | 7 | 151_172 | 0 | 190.0 | Repeat | Note=LRR 1 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000423548 | 0 | 7 | 175_196 | 0 | 190.0 | Repeat | Note=LRR 2 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000423548 | 0 | 7 | 199_220 | 0 | 190.0 | Repeat | Note=LRR 3 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000423548 | 0 | 7 | 223_244 | 0 | 190.0 | Repeat | Note=LRR 4 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000423548 | 0 | 7 | 248_269 | 0 | 190.0 | Repeat | Note=LRR 5 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000423548 | 0 | 7 | 272_293 | 0 | 190.0 | Repeat | Note=LRR 6 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000423548 | 0 | 7 | 296_317 | 0 | 190.0 | Repeat | Note=LRR 7 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000423548 | 0 | 7 | 320_341 | 0 | 190.0 | Repeat | Note=LRR 8 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000423548 | 0 | 7 | 344_365 | 0 | 190.0 | Repeat | Note=LRR 9 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000470033 | 8 | 17 | 248_269 | 242.66666666666666 | 725.0 | Repeat | Note=LRR 5 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000470033 | 8 | 17 | 272_293 | 242.66666666666666 | 725.0 | Repeat | Note=LRR 6 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000470033 | 8 | 17 | 296_317 | 242.66666666666666 | 725.0 | Repeat | Note=LRR 7 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000470033 | 8 | 17 | 320_341 | 242.66666666666666 | 725.0 | Repeat | Note=LRR 8 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000470033 | 8 | 17 | 344_365 | 242.66666666666666 | 725.0 | Repeat | Note=LRR 9 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000307765 | 9 | 18 | 431_443 | 275.6666666666667 | 758.0 | Topological domain | Cytoplasmic | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000307765 | 9 | 18 | 465_486 | 275.6666666666667 | 758.0 | Topological domain | Extracellular | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000307765 | 9 | 18 | 508_527 | 275.6666666666667 | 758.0 | Topological domain | Cytoplasmic | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000307765 | 9 | 18 | 549_577 | 275.6666666666667 | 758.0 | Topological domain | Extracellular | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000307765 | 9 | 18 | 599_629 | 275.6666666666667 | 758.0 | Topological domain | Cytoplasmic | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000307765 | 9 | 18 | 651_651 | 275.6666666666667 | 758.0 | Topological domain | Extracellular | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000307765 | 9 | 18 | 673_757 | 275.6666666666667 | 758.0 | Topological domain | Cytoplasmic | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000343542 | 9 | 16 | 431_443 | 275.6666666666667 | 710.0 | Topological domain | Cytoplasmic | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000343542 | 9 | 16 | 465_486 | 275.6666666666667 | 710.0 | Topological domain | Extracellular | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000343542 | 9 | 16 | 508_527 | 275.6666666666667 | 710.0 | Topological domain | Cytoplasmic | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000343542 | 9 | 16 | 549_577 | 275.6666666666667 | 710.0 | Topological domain | Extracellular | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000343542 | 9 | 16 | 599_629 | 275.6666666666667 | 710.0 | Topological domain | Cytoplasmic | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000343542 | 9 | 16 | 651_651 | 275.6666666666667 | 710.0 | Topological domain | Extracellular | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000343542 | 9 | 16 | 673_757 | 275.6666666666667 | 710.0 | Topological domain | Cytoplasmic | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000423548 | 0 | 7 | 1_409 | 0 | 190.0 | Topological domain | Extracellular | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000423548 | 0 | 7 | 431_443 | 0 | 190.0 | Topological domain | Cytoplasmic | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000423548 | 0 | 7 | 465_486 | 0 | 190.0 | Topological domain | Extracellular | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000423548 | 0 | 7 | 508_527 | 0 | 190.0 | Topological domain | Cytoplasmic | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000423548 | 0 | 7 | 549_577 | 0 | 190.0 | Topological domain | Extracellular | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000423548 | 0 | 7 | 599_629 | 0 | 190.0 | Topological domain | Cytoplasmic | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000423548 | 0 | 7 | 651_651 | 0 | 190.0 | Topological domain | Extracellular | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000423548 | 0 | 7 | 673_757 | 0 | 190.0 | Topological domain | Cytoplasmic | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000470033 | 8 | 17 | 431_443 | 242.66666666666666 | 725.0 | Topological domain | Cytoplasmic | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000470033 | 8 | 17 | 465_486 | 242.66666666666666 | 725.0 | Topological domain | Extracellular | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000470033 | 8 | 17 | 508_527 | 242.66666666666666 | 725.0 | Topological domain | Cytoplasmic | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000470033 | 8 | 17 | 549_577 | 242.66666666666666 | 725.0 | Topological domain | Extracellular | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000470033 | 8 | 17 | 599_629 | 242.66666666666666 | 725.0 | Topological domain | Cytoplasmic | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000470033 | 8 | 17 | 651_651 | 242.66666666666666 | 725.0 | Topological domain | Extracellular | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000470033 | 8 | 17 | 673_757 | 242.66666666666666 | 725.0 | Topological domain | Cytoplasmic | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000307765 | 9 | 18 | 410_430 | 275.6666666666667 | 758.0 | Transmembrane | Helical%3B Name%3D1 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000307765 | 9 | 18 | 444_464 | 275.6666666666667 | 758.0 | Transmembrane | Helical%3B Name%3D2 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000307765 | 9 | 18 | 487_507 | 275.6666666666667 | 758.0 | Transmembrane | Helical%3B Name%3D3 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000307765 | 9 | 18 | 528_548 | 275.6666666666667 | 758.0 | Transmembrane | Helical%3B Name%3D4 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000307765 | 9 | 18 | 578_598 | 275.6666666666667 | 758.0 | Transmembrane | Helical%3B Name%3D5 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000307765 | 9 | 18 | 630_650 | 275.6666666666667 | 758.0 | Transmembrane | Helical%3B Name%3D6 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000307765 | 9 | 18 | 652_672 | 275.6666666666667 | 758.0 | Transmembrane | Helical%3B Name%3D7 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000343542 | 9 | 16 | 410_430 | 275.6666666666667 | 710.0 | Transmembrane | Helical%3B Name%3D1 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000343542 | 9 | 16 | 444_464 | 275.6666666666667 | 710.0 | Transmembrane | Helical%3B Name%3D2 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000343542 | 9 | 16 | 487_507 | 275.6666666666667 | 710.0 | Transmembrane | Helical%3B Name%3D3 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000343542 | 9 | 16 | 528_548 | 275.6666666666667 | 710.0 | Transmembrane | Helical%3B Name%3D4 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000343542 | 9 | 16 | 578_598 | 275.6666666666667 | 710.0 | Transmembrane | Helical%3B Name%3D5 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000343542 | 9 | 16 | 630_650 | 275.6666666666667 | 710.0 | Transmembrane | Helical%3B Name%3D6 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000343542 | 9 | 16 | 652_672 | 275.6666666666667 | 710.0 | Transmembrane | Helical%3B Name%3D7 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000423548 | 0 | 7 | 410_430 | 0 | 190.0 | Transmembrane | Helical%3B Name%3D1 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000423548 | 0 | 7 | 444_464 | 0 | 190.0 | Transmembrane | Helical%3B Name%3D2 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000423548 | 0 | 7 | 487_507 | 0 | 190.0 | Transmembrane | Helical%3B Name%3D3 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000423548 | 0 | 7 | 528_548 | 0 | 190.0 | Transmembrane | Helical%3B Name%3D4 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000423548 | 0 | 7 | 578_598 | 0 | 190.0 | Transmembrane | Helical%3B Name%3D5 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000423548 | 0 | 7 | 630_650 | 0 | 190.0 | Transmembrane | Helical%3B Name%3D6 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000423548 | 0 | 7 | 652_672 | 0 | 190.0 | Transmembrane | Helical%3B Name%3D7 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000470033 | 8 | 17 | 410_430 | 242.66666666666666 | 725.0 | Transmembrane | Helical%3B Name%3D1 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000470033 | 8 | 17 | 444_464 | 242.66666666666666 | 725.0 | Transmembrane | Helical%3B Name%3D2 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000470033 | 8 | 17 | 487_507 | 242.66666666666666 | 725.0 | Transmembrane | Helical%3B Name%3D3 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000470033 | 8 | 17 | 528_548 | 242.66666666666666 | 725.0 | Transmembrane | Helical%3B Name%3D4 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000470033 | 8 | 17 | 578_598 | 242.66666666666666 | 725.0 | Transmembrane | Helical%3B Name%3D5 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000470033 | 8 | 17 | 630_650 | 242.66666666666666 | 725.0 | Transmembrane | Helical%3B Name%3D6 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000470033 | 8 | 17 | 652_672 | 242.66666666666666 | 725.0 | Transmembrane | Helical%3B Name%3D7 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | LRBA | chr4:151509200 | chr4:159549790 | ENST00000357115 | - | 41 | 58 | 2073_2181 | 2121.0 | 2864.0 | Domain | BEACH-type PH |
Hgene | LRBA | chr4:151509200 | chr4:159549790 | ENST00000357115 | - | 41 | 58 | 2200_2489 | 2121.0 | 2864.0 | Domain | BEACH |
Hgene | LRBA | chr4:151509200 | chr4:159549790 | ENST00000510413 | - | 40 | 57 | 2073_2181 | 2110.0 | 2852.0 | Domain | BEACH-type PH |
Hgene | LRBA | chr4:151509200 | chr4:159549790 | ENST00000510413 | - | 40 | 57 | 2200_2489 | 2110.0 | 2852.0 | Domain | BEACH |
Hgene | LRBA | chr4:151509200 | chr4:159549790 | ENST00000357115 | - | 41 | 58 | 2591_2633 | 2121.0 | 2864.0 | Repeat | Note=WD 2 |
Hgene | LRBA | chr4:151509200 | chr4:159549790 | ENST00000357115 | - | 41 | 58 | 2636_2679 | 2121.0 | 2864.0 | Repeat | Note=WD 3 |
Hgene | LRBA | chr4:151509200 | chr4:159549790 | ENST00000357115 | - | 41 | 58 | 2695_2735 | 2121.0 | 2864.0 | Repeat | Note=WD 4 |
Hgene | LRBA | chr4:151509200 | chr4:159549790 | ENST00000357115 | - | 41 | 58 | 2777_2816 | 2121.0 | 2864.0 | Repeat | Note=WD 5 |
Hgene | LRBA | chr4:151509200 | chr4:159549790 | ENST00000357115 | - | 41 | 58 | 2819_2858 | 2121.0 | 2864.0 | Repeat | Note=WD 6 |
Hgene | LRBA | chr4:151509200 | chr4:159549790 | ENST00000510413 | - | 40 | 57 | 2591_2633 | 2110.0 | 2852.0 | Repeat | Note=WD 2 |
Hgene | LRBA | chr4:151509200 | chr4:159549790 | ENST00000510413 | - | 40 | 57 | 2636_2679 | 2110.0 | 2852.0 | Repeat | Note=WD 3 |
Hgene | LRBA | chr4:151509200 | chr4:159549790 | ENST00000510413 | - | 40 | 57 | 2695_2735 | 2110.0 | 2852.0 | Repeat | Note=WD 4 |
Hgene | LRBA | chr4:151509200 | chr4:159549790 | ENST00000510413 | - | 40 | 57 | 2777_2816 | 2110.0 | 2852.0 | Repeat | Note=WD 5 |
Hgene | LRBA | chr4:151509200 | chr4:159549790 | ENST00000510413 | - | 40 | 57 | 2819_2858 | 2110.0 | 2852.0 | Repeat | Note=WD 6 |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000307765 | 9 | 18 | 26_63 | 275.6666666666667 | 758.0 | Domain | LDL-receptor class A | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000307765 | 9 | 18 | 91_127 | 275.6666666666667 | 758.0 | Domain | Note=LRRNT | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000343542 | 9 | 16 | 26_63 | 275.6666666666667 | 710.0 | Domain | LDL-receptor class A | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000343542 | 9 | 16 | 91_127 | 275.6666666666667 | 710.0 | Domain | Note=LRRNT | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000470033 | 8 | 17 | 26_63 | 242.66666666666666 | 725.0 | Domain | LDL-receptor class A | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000470033 | 8 | 17 | 91_127 | 242.66666666666666 | 725.0 | Domain | Note=LRRNT | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000307765 | 9 | 18 | 151_172 | 275.6666666666667 | 758.0 | Repeat | Note=LRR 1 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000307765 | 9 | 18 | 175_196 | 275.6666666666667 | 758.0 | Repeat | Note=LRR 2 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000307765 | 9 | 18 | 199_220 | 275.6666666666667 | 758.0 | Repeat | Note=LRR 3 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000307765 | 9 | 18 | 223_244 | 275.6666666666667 | 758.0 | Repeat | Note=LRR 4 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000307765 | 9 | 18 | 248_269 | 275.6666666666667 | 758.0 | Repeat | Note=LRR 5 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000307765 | 9 | 18 | 272_293 | 275.6666666666667 | 758.0 | Repeat | Note=LRR 6 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000343542 | 9 | 16 | 151_172 | 275.6666666666667 | 710.0 | Repeat | Note=LRR 1 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000343542 | 9 | 16 | 175_196 | 275.6666666666667 | 710.0 | Repeat | Note=LRR 2 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000343542 | 9 | 16 | 199_220 | 275.6666666666667 | 710.0 | Repeat | Note=LRR 3 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000343542 | 9 | 16 | 223_244 | 275.6666666666667 | 710.0 | Repeat | Note=LRR 4 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000343542 | 9 | 16 | 248_269 | 275.6666666666667 | 710.0 | Repeat | Note=LRR 5 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000343542 | 9 | 16 | 272_293 | 275.6666666666667 | 710.0 | Repeat | Note=LRR 6 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000470033 | 8 | 17 | 151_172 | 242.66666666666666 | 725.0 | Repeat | Note=LRR 1 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000470033 | 8 | 17 | 175_196 | 242.66666666666666 | 725.0 | Repeat | Note=LRR 2 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000470033 | 8 | 17 | 199_220 | 242.66666666666666 | 725.0 | Repeat | Note=LRR 3 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000470033 | 8 | 17 | 223_244 | 242.66666666666666 | 725.0 | Repeat | Note=LRR 4 | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000307765 | 9 | 18 | 1_409 | 275.6666666666667 | 758.0 | Topological domain | Extracellular | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000343542 | 9 | 16 | 1_409 | 275.6666666666667 | 710.0 | Topological domain | Extracellular | |
Tgene | RXFP1 | chr4:151509200 | chr4:159549790 | ENST00000470033 | 8 | 17 | 1_409 | 242.66666666666666 | 725.0 | Topological domain | Extracellular |
Top |
Fusion Gene Sequence for LRBA-RXFP1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000510413_ENST00000460056_TCGA-GD-A2C5-01A_LRBA_chr4_151509200_-_RXFP1_chr4_159549790_length(transcript)=8219nt_BP=6615nt ATCTCCGCCGCCACCTCGGTCTCGCTGCTCCTGGGCGGGGGGTGAGGACGAGTCCGGAGTATCTGGGGTTTGGCGTTGTTGTCAGCCTCG GGGAGAGAGATTGGACAAATATTCTCCAAGAGGAGGAGGGCGACGCCAAGGACTTTCCACATCAACTGCTTTGGGGTATCTCCACAAGTT GGAAGAGGGACCCTTTCGTTTTGCATTGCGTGTGTTGTGCTCATTACCAGTGCAGCGACTGCCGTCCCAGGGTGACTCTGAGTTGTCCTT TATCGTGAGCTAGCAATGGCTAGCGAAGACAATCGTGTCCCTTCCCCGCCACCAACAGGTGATGACGGGGGAGGTGGAGGGAGAGAAGAA ACCCCTACTGAAGGGGGTGCATTGTCTCTGAAACCAGGGCTCCCCATCAGGGGCATCAGAATGAAATTTGCCGTGTTGACCGGTTTGGTT GAAGTTGGAGAAGTATCCAATAGGGATATTGTAGAAACTGTCTTTAACCTGTTGGTAGGAGGACAGTTTGATCTGGAAATGAATTTCATT ATCCAAGAAGGTGAGAGTATTAACTGCATGGTGGACCTACTGGAAAAATGTGACATTACGTGCCAAGCAGAAGTCTGGAGCATGTTTACA GCCATTCTGAAGAAAAGCATACGGAATCTTCAAGTCTGCACTGAAGTAGGCCTTGTTGAAAAAGTGCTTGGGAAAATTGAAAAAGTTGAC AATATGATAGCAGATCTTTTGGTTGACATGTTGGGAGTGCTGGCTAGCTATAATTTGACAGTTCGCGAGCTAAAGCTTTTCTTCAGTAAA CTTCAAGGAGATAAAGGACGATGGCCTCCACATGCTGGGAAGTTGCTGTCTGTGTTAAAGCATATGCCTCAGAAGTATGGTCCTGATGCC TTTTTTAACTTTCCAGGAAAGAGTGCTGCAGCTATTGCATTACCTCCTATAGCCAAATGGCCATACCAGAATGGTTTTACATTTCATACA TGGCTTAGAATGGATCCTGTAAATAACATCAATGTAGATAAGGATAAACCATATTTGTATTGTTTCAGAACCAGCAAAGGTCTTGGCTAT TCTGCTCATTTTGTTGGAGGCTGTTTGATTGTAACATCAATAAAGTCAAAAGGAAAAGGCTTTCAACACTGTGTGAAATTTGATTTCAAG CCACAAAAGTGGTATATGGTTACCATAGTACACATCTATAACCGATGGAAGAATAGTGAACTTCGATGTTATGTGAATGGTGAGCTGGCT TCCTATGGAGAGATAACATGGTTTGTCAACACTAGCGATACCTTTGACAAATGTTTCCTGGGCTCATCAGAAACAGCAGATGCTAATAGA GTATTCTGTGGTCAGATGACTGCAGTTTACCTTTTCAGTGAAGCTCTAAATGCAGCTCAGATATTTGCTATTTATCAGTTGGGCCTGGGA TACAAGGGTACATTTAAATTCAAAGCAGAAAGCGACCTTTTCCTTGCTGAGCATCACAAACTTTTATTGTACGATGGGAAACTCTCTAGT GCCATTGCATTCACGTACAATCCACGGGCTACAGATGCCCAGCTTTGTCTTGAATCATCTCCTAAGGACAACCCTTCAATTTTTGTTCAT TCACCACATGCACTCATGCTCCAGGATGTAAAGGCAGTTTTAACACATTCCATCCAAAGTGCAATGCATTCAATTGGAGGAGTACAAGTA CTATTTCCACTTTTTGCACAGTTGGATTACAGGCAATATTTGTCTGATGAGATTGATTTGACTATATGTTCAACCTTGCTGGCCTTTATC ATGGAATTGTTGAAGAACTCAATTGCTATGCAGGAACAGATGCTTGCCTGTAAGGGCTTCTTGGTAATAGGATATAGCCTTGAAAAGTCT TCCAAATCTCATGTTAGCAGAGCAGTACTTGAACTTTGCCTTGCATTTTCAAAATATCTGAGTAATCTGCAGAATGGGATGCCCCTGCTC AAGCAATTGTGTGATCACGTTCTTCTTAATCCTGCCATATGGATTCATACCCCAGCCAAGGTTCAACTGATGCTCTATACTTATCTGTCC ACGGAATTCATTGGTACAGTCAACATATATAACACCATTCGGAGAGTTGGAACAGTGCTTCTCATCATGCACACGCTGAAGTACTACTAC TGGGCAGTGAATCCTCAGGATCGAAGTGGTATCACCCCAAAAGGATTAGATGGACCGCGACCTAATCAAAAAGAAATGCTTTCTCTACGA GCATTCTTGTTGATGTTCATTAAGCAATTAGTGATGAAGGATTCTGGAGTAAAGGAAGATGAATTACAGGCCATTCTTAATTACCTACTG ACTATGCATGAGGATGACAATCTAATGGATGTCCTACAGCTGCTTGTTGCATTAATGTCAGAACACCCTAACTCTATGATTCCTGCTTTT GACCAAAGGAATGGGTTACGTGTTATCTACAAACTTCTGGCATCGAAAAGTGAAGGAATCAGGGTACAAGCTCTTAAGGCAATGGGTTAT TTTTTAAAACATCTGGCCCCAAAGAGGAAAGCAGAAGTCATGCTTGGACATGGATTGTTTTCATTGCTAGCTGAAAGGCTCATGCTTCAG ACAAATTTAATCACAATGACCACATATAATGTGCTGTTTGAGATTCTTATAGAACAGATTGGTACTCAGGTGATACATAAACAGCATCCA GATCCTGATTCTTCAGTGAAGATACAAAACCCTCAGATACTAAAAGTAATTGCGACCCTACTTCGAAATTCTCCCCAGTGCCCAGAGAGC ATGGAGGTTCGCAGAGCCTTTCTTTCTGACATGATTAAACTTTTTAATAACAGTAGAGAAAACAGGAGGAGCTTGCTACAATGCTCTGTG TGGCAAGAATGGATGCTTTCTCTCTGCTATTTTAATCCTAAGAATTCAGATGAGCAAAAGATAACAGAAATGGTATACGCCATATTCAGA ATCCTGCTTTACCATGCAGTCAAATATGAGTGGGGTGGCTGGCGTGTATGGGTAGACACTTTATCAATCACTCATTCAAAGGTCACTTTT GAAATACACAAAGAAAACCTTGCCAATATATTTAGGGAACAGCAAGGAAAAGTTGATGAAGAAATAGGGCTGTGTTCTTCAACTTCAGTT CAAGCAGCCTCTGGCATTAGAAGGGATATTAATGTTTCAGTAGGATCCCAGCAACCAGATACGAAGGATTCTCCTGTCTGTCCTCATTTC ACCACAAATGGTAATGAAAATTCAAGTATAGAGAAGACAAGTTCACTAGAATCTGCATCTAATATTGAACTGCAAACTACTAATACATCT TATGAAGAAATGAAAGCTGAGCAAGAAAATCAGGAGTTACCAGATGAAGGCACTTTGGAAGAAACACTGACAAATGAGACAAGGAATGCA GATGATTTAGAAGTATCTTCTGACATAATAGAAGCTGTGGCTATTTCCTCTAATTCTTTTATAACAACTGGCAAAGATTCAATGACTGTC AGTGAAGTAACTGCTTCTATAAGTTCTCCTTCAGAAGAGGATGCCTCAGAGATGCCAGAATTCTTGGATAAATCTATAGTAGAGGAAGAG GAAGATGATGATTATGTGGAACTGAAAGTAGAAGGCAGTCCTACTGAGGAAGCTAATCTACCCACAGAGCTCCAAGATAACAGTTTGTCT CCAGCTGCATCTGAAGCCGGTGAAAAACTGGACATGTTTGGTAATGATGACAAATTAATATTTCAAGAAGGAAAACCTGTTACTGAAAAG CAAACTGATACTGAAACTCAAGATTCTAAAGATTCTGGAATTCAGACTATGACAGCATCAGGGTCTTCAGCTATGTCACCAGAAACTACT GTTTCCCAAATAGCTGTAGAATCAGACCTTGGTCAGATGCTGGAGGAAGGGAAGAAAGCAACTAACCTCACTAGAGAAACCAAATTAATT AATGATTGTCATGGTAGTGTCTCTGAGGCTTCTTCTGAGCAAAAGATTGCGAAGTTGGATGTTTCCAATGTTGCTACAGATACTGAGAGG CTGGAGTTGAAGGCCAGTCCCAACGTGGAAGCACCTCAACCTCATCGACATGTGCTTGAGATATCAAGGCAACATGAGCAGCCAGGGCAA GGAATAGCACCAGATGCAGTTAATGGACAAAGGAGGGATTCCAGATCTACTGTGTTTCGTATTCCTGAGTTCAACTGGTCTCAGATGCAT CAACGTTTGCTCACTGATCTATTATTTTCAATAGAAACAGATATACAGATGTGGAGAAGCCATTCAACAAAGACAGTTATGGACTTCGTG AATAGCAGTGATAATGTCATCTTTGTACACAACACAATTCATCTCATCTCTCAAGTGATGGACAATATGGTCATGGCTTGTGGGGGTATA CTGCCATTGCTTTCAGCTGCTACATCGGCTACACATGAACTGGAAAATATTGAACCTACTCAAGGCCTTTCAATAGAAGCCTCTGTGACA TTTTTGCAGAGGCTAATTAGCCTTGTGGATGTGCTTATATTTGCAAGTTCTCTTGGCTTTACTGAAATTGAAGCTGAAAAAAGTATGTCA TCTGGAGGAATTTTGCGGCAGTGTCTCCGACTAGTTTGTGCAGTCGCAGTAAGGAATTGCTTGGAGTGTCAACAGCATTCACAACTGAAA ACTAGGGGAGATAAAGCCTTGAAACCAATGCATAGCCTTATTCCTTTAGGGAAATCTGCAGCGAAGAGCCCAGTGGACATTGTGACTGGC GGTATATCTCCAGTAAGAGATCTTGACAGGCTTCTACAGGACATGGATATTAATCGGCTTAGGGCAGTTGTTTTCAGAGACATAGAGGAT AGCAAACAAGCTCAATTTTTAGCCTTGGCAGTAGTATACTTTATCTCTGTTCTTATGGTCTCCAAGTACAGAGACATTTTGGAACCCCAA AATGAAAGGCATAGCCAGTCATGTACAGAAACTGGCAGTGAAAATGAGAATGTATCACTCTCTGAAATCACACCAGCAGCATTCAGCACT TTAACTACGGCATCAGTGGAAGAATCTGAAAGCACATCATCTGCTCGAAGGAGGGACTCAGGCATTGGGGAAGAAACAGCCACTGGTTTA GGAAGCCATGTGGAAGTAACTCCTCACACAGCACCTCCTGGTGTCAGTGCAGGCCCAGATGCAATCAGCGAGGTGCTATCTACTCTTTCT TTAGAAGTCAATAAGTCTCCGGAAACCAAAAATGATAGAGGAAATGACTTGGACACTAAGGCTACACCGTCAGTTTCAGTTTCAAAAAAC GTCAATGTGAAAGACATTCTCCGAAGCTTGGTTAACATACCAGCAGATGGAGTCACAGTGGATCCTGCCCTTCTGCCACCAGCCTGCCTT GGAGCCCTTGGTGATCTATCTGTGGAACAACCCGTGCAGTTCAGATCTTTTGACAGAAGTGTCATTGTTGCAGCAAAAAAGTCAGCAGTC TCACCTTCCACCTTTAATACAAGCATACCTACCAATGCTGTCAGTGTGGTTTCCTCAGTAGATTCAGCCCAAGCCTCAGATATGGGAGGA GAATCACCAGGCAGTAGATCATCTAATGCAAAATTGCCCTCAGTTCCAACAGTTGATTCAGTTTCACAAGATCCGGTTTCAAATATGAGT ATTACAGAGAGGCTTGAACACGCTTTGGAAAAGGCAGCTCCTCTCCTTCGTGAGATTTTTGTGGATTTTGCACCTTTTCTTTCTCGGACA CTTTTGGGTAGCCATGGACAAGAACTGCTTATAGAAGGAACAAGTCTGGTTTGCATGAAGTCGAGTAGTTCAGTTGTGGAATTGGTTATG CTACTGTGTTCTCAGGAGTGGCAAAATTCTATTCAGAAGAATGCAGGCCTTGCTTTTATCGAACTTGTCAATGAAGGAAGGTTGCTTAGC CAGACAATGAAGGATCATCTAGTAAGAGTAGCAAATGAAGCTGAATTTATCCTGAGCAGGCAGAGAGCAGAAGATATTCACAGACATGCG GAATTTGAGTCACTGTGTGCCCAGTATTCTGCAGACAAACGAGAAGATGAGAAGATGTGTGATCATTTGATAAGAGCAGCAAAATATCGT GACCACGTGACAGCAACTCAACTAATCCAGAAAATTATCAACATTCTCACAGACAAGCATGGAGCCTGGGGAAATTCTGCAGTGAGTCGT CCTCTTGAGTTCTGGCGCCTTGACTACTGGGAAGATGACTTGCGGCGCCGGCGACGATTTGTGCGTAACCCTCTAGGATCGACACATCCT GAAGCGACACTAAAAACAGCCGTGGAACATGCCACAGATGAAGATATCCTTGCTAAAGGAAAACAGTCCATCAGGAGTCAGGCTTTAGGA AATCAGAACTCAGAAAACGAGATCCTCCTGGAAGGCGATGATGATACTCTGTCATCCGTGGATGAGAAAGATTTAGAGAATCTTGCCGGT CCTGTTAGCCTGAGCACACCAGCTCAGCTTGTGGCCCCCTCTGTTGTAGTAAAGGGCACTCTTTCTGTCACCTCCTCCGAACTCTATTTT GAGGTGGATGAAGAGGATCCTAACTTCAAAAAAATCGACCCCAAGAGTGATGAGGAAAAACAAAATTAATCACTTAAATGAAAATACTTT TGCACCTCTCCAGAAACTGGATGAATTGGATTTAGGAAGTAATAAGATTGAAAATCTTCCACCGCTTATATTCAAGGACCTGAAGGAGCT GTCACAATTGAATCTTTCCTATAATCCAATCCAGAAAATTCAAGCAAACCAATTTGATTATCTTGTCAAACTCAAGTCTCTCAGCCTAGA AGGGATTGAAATTTCAAATATCCAACAAAGGATGTTTAGACCTCTTATGAATCTCTCTCACATATATTTTAAGAAATTCCAGTACTGTGG GTATGCACCACATGTTCGCAGCTGTAAACCAAACACTGATGGAATTTCATCTCTAGAGAATCTCTTGGCAAGCATTATTCAGAGAGTATT TGTCTGGGTTGTATCTGCAGTTACCTGCTTTGGAAACATTTTTGTCATTTGCATGCGACCTTATATCAGGTCTGAGAACAAGCTGTATGC CATGTCAATCATTTCTCTCTGCTGTGCCGACTGCTTAATGGGAATATATTTATTCGTGATCGGAGGCTTTGACCTAAAGTTTCGTGGAGA ATACAATAAGCATGCGCAGCTGTGGATGGAGAGTACTCATTGTCAGCTTGTAGGATCTTTGGCCATTCTGTCCACAGAAGTATCAGTTTT ACTGTTAACATTTCTGACATTGGAAAAATACATCTGCATTGTCTATCCTTTTAGATGTGTGAGACCTGGAAAATGCAGAACAATTACAGT TCTGATTCTCATTTGGATTACTGGTTTTATAGTGGCTTTCATTCCATTGAGCAATAAGGAATTTTTCAAAAACTACTATGGCACCAATGG AGTATGCTTCCCTCTTCATTCAGAAGATACAGAAAGTATTGGAGCCCAGATTTATTCAGTGGCAATTTTTCTTGGTATTAATTTGGCCGC ATTTATCATCATAGTTTTTTCCTATGGAAGCATGTTTTATAGTGTTCATCAAAGTGCCATAACAGCAACTGAAATACGGAATCAAGTTAA AAAAGAGATGATCCTTGCCAAACGTTTTTTCTTTATAGTATTTACTGATGCATTATGCTGGATACCCATTTTTGTAGTGAAATTTCTTTC ACTGCTTCAGGTAGAAATACCAGGTACCATAACCTCTTGGGTAGTGATTTTTATTCTGCCCATTAACAGTGCTTTGAACCCAATTCTCTA TACTCTGACCACAAGACCATTTAAAGAAATGATTCATCGGTTTTGGTATAACTACAGACAAAGAAAATCTATGGACAGCAAAGGTCAGAA AACATATGCTCCATCATTCATCTGGGTGGAAATGTGGCCACTGCAGGAGATGCCACCTGAGTTAATGAAGCCGGACCTTTTCACATACCC CTGTGAAATGTCACTGATTTCTCAATCAACGAGACTCAATTCCTATTCATGACTGACTCTGAAATTCATTTCTTCGCAGAGAATACTGTG GGGGTGCTTCATGAGGGATTTACTGGTATGAAATGAATACCACAAAATTAATTTATAATAATAGCTAAGATAAATATTTTACAAGGACAT >In-frame_ENST00000510413_ENST00000460056_TCGA-GD-A2C5-01A_LRBA_chr4_151509200_-_RXFP1_chr4_159549790_length(amino acids)=2117AA_start in transcript=285_stop in transcript=6638 MASEDNRVPSPPPTGDDGGGGGREETPTEGGALSLKPGLPIRGIRMKFAVLTGLVEVGEVSNRDIVETVFNLLVGGQFDLEMNFIIQEGE SINCMVDLLEKCDITCQAEVWSMFTAILKKSIRNLQVCTEVGLVEKVLGKIEKVDNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGDK GRWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMDPVNNINVDKDKPYLYCFRTSKGLGYSAHFV GGCLIVTSIKSKGKGFQHCVKFDFKPQKWYMVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCGQ MTAVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLAEHHKLLLYDGKLSSAIAFTYNPRATDAQLCLESSPKDNPSIFVHSPHAL MLQDVKAVLTHSIQSAMHSIGGVQVLFPLFAQLDYRQYLSDEIDLTICSTLLAFIMELLKNSIAMQEQMLACKGFLVIGYSLEKSSKSHV SRAVLELCLAFSKYLSNLQNGMPLLKQLCDHVLLNPAIWIHTPAKVQLMLYTYLSTEFIGTVNIYNTIRRVGTVLLIMHTLKYYYWAVNP QDRSGITPKGLDGPRPNQKEMLSLRAFLLMFIKQLVMKDSGVKEDELQAILNYLLTMHEDDNLMDVLQLLVALMSEHPNSMIPAFDQRNG LRVIYKLLASKSEGIRVQALKAMGYFLKHLAPKRKAEVMLGHGLFSLLAERLMLQTNLITMTTYNVLFEILIEQIGTQVIHKQHPDPDSS VKIQNPQILKVIATLLRNSPQCPESMEVRRAFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNSDEQKITEMVYAIFRILLYH AVKYEWGGWRVWVDTLSITHSKVTFEIHKENLANIFREQQGKVDEEIGLCSSTSVQAASGIRRDINVSVGSQQPDTKDSPVCPHFTTNGN ENSSIEKTSSLESASNIELQTTNTSYEEMKAEQENQELPDEGTLEETLTNETRNADDLEVSSDIIEAVAISSNSFITTGKDSMTVSEVTA SISSPSEEDASEMPEFLDKSIVEEEEDDDYVELKVEGSPTEEANLPTELQDNSLSPAASEAGEKLDMFGNDDKLIFQEGKPVTEKQTDTE TQDSKDSGIQTMTASGSSAMSPETTVSQIAVESDLGQMLEEGKKATNLTRETKLINDCHGSVSEASSEQKIAKLDVSNVATDTERLELKA SPNVEAPQPHRHVLEISRQHEQPGQGIAPDAVNGQRRDSRSTVFRIPEFNWSQMHQRLLTDLLFSIETDIQMWRSHSTKTVMDFVNSSDN VIFVHNTIHLISQVMDNMVMACGGILPLLSAATSATHELENIEPTQGLSIEASVTFLQRLISLVDVLIFASSLGFTEIEAEKSMSSGGIL RQCLRLVCAVAVRNCLECQQHSQLKTRGDKALKPMHSLIPLGKSAAKSPVDIVTGGISPVRDLDRLLQDMDINRLRAVVFRDIEDSKQAQ FLALAVVYFISVLMVSKYRDILEPQNERHSQSCTETGSENENVSLSEITPAAFSTLTTASVEESESTSSARRRDSGIGEETATGLGSHVE VTPHTAPPGVSAGPDAISEVLSTLSLEVNKSPETKNDRGNDLDTKATPSVSVSKNVNVKDILRSLVNIPADGVTVDPALLPPACLGALGD LSVEQPVQFRSFDRSVIVAAKKSAVSPSTFNTSIPTNAVSVVSSVDSAQASDMGGESPGSRSSNAKLPSVPTVDSVSQDPVSNMSITERL EHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSQTMKD HLVRVANEAEFILSRQRAEDIHRHAEFESLCAQYSADKREDEKMCDHLIRAAKYRDHVTATQLIQKIINILTDKHGAWGNSAVSRPLEFW RLDYWEDDLRRRRRFVRNPLGSTHPEATLKTAVEHATDEDILAKGKQSIRSQALGNQNSENEILLEGDDDTLSSVDEKDLENLAGPVSLS -------------------------------------------------------------- >In-frame_ENST00000510413_ENST00000307765_TCGA-GD-A2C5-01A_LRBA_chr4_151509200_-_RXFP1_chr4_159549790_length(transcript)=9379nt_BP=6615nt ATCTCCGCCGCCACCTCGGTCTCGCTGCTCCTGGGCGGGGGGTGAGGACGAGTCCGGAGTATCTGGGGTTTGGCGTTGTTGTCAGCCTCG GGGAGAGAGATTGGACAAATATTCTCCAAGAGGAGGAGGGCGACGCCAAGGACTTTCCACATCAACTGCTTTGGGGTATCTCCACAAGTT GGAAGAGGGACCCTTTCGTTTTGCATTGCGTGTGTTGTGCTCATTACCAGTGCAGCGACTGCCGTCCCAGGGTGACTCTGAGTTGTCCTT TATCGTGAGCTAGCAATGGCTAGCGAAGACAATCGTGTCCCTTCCCCGCCACCAACAGGTGATGACGGGGGAGGTGGAGGGAGAGAAGAA ACCCCTACTGAAGGGGGTGCATTGTCTCTGAAACCAGGGCTCCCCATCAGGGGCATCAGAATGAAATTTGCCGTGTTGACCGGTTTGGTT GAAGTTGGAGAAGTATCCAATAGGGATATTGTAGAAACTGTCTTTAACCTGTTGGTAGGAGGACAGTTTGATCTGGAAATGAATTTCATT ATCCAAGAAGGTGAGAGTATTAACTGCATGGTGGACCTACTGGAAAAATGTGACATTACGTGCCAAGCAGAAGTCTGGAGCATGTTTACA GCCATTCTGAAGAAAAGCATACGGAATCTTCAAGTCTGCACTGAAGTAGGCCTTGTTGAAAAAGTGCTTGGGAAAATTGAAAAAGTTGAC AATATGATAGCAGATCTTTTGGTTGACATGTTGGGAGTGCTGGCTAGCTATAATTTGACAGTTCGCGAGCTAAAGCTTTTCTTCAGTAAA CTTCAAGGAGATAAAGGACGATGGCCTCCACATGCTGGGAAGTTGCTGTCTGTGTTAAAGCATATGCCTCAGAAGTATGGTCCTGATGCC TTTTTTAACTTTCCAGGAAAGAGTGCTGCAGCTATTGCATTACCTCCTATAGCCAAATGGCCATACCAGAATGGTTTTACATTTCATACA TGGCTTAGAATGGATCCTGTAAATAACATCAATGTAGATAAGGATAAACCATATTTGTATTGTTTCAGAACCAGCAAAGGTCTTGGCTAT TCTGCTCATTTTGTTGGAGGCTGTTTGATTGTAACATCAATAAAGTCAAAAGGAAAAGGCTTTCAACACTGTGTGAAATTTGATTTCAAG CCACAAAAGTGGTATATGGTTACCATAGTACACATCTATAACCGATGGAAGAATAGTGAACTTCGATGTTATGTGAATGGTGAGCTGGCT TCCTATGGAGAGATAACATGGTTTGTCAACACTAGCGATACCTTTGACAAATGTTTCCTGGGCTCATCAGAAACAGCAGATGCTAATAGA GTATTCTGTGGTCAGATGACTGCAGTTTACCTTTTCAGTGAAGCTCTAAATGCAGCTCAGATATTTGCTATTTATCAGTTGGGCCTGGGA TACAAGGGTACATTTAAATTCAAAGCAGAAAGCGACCTTTTCCTTGCTGAGCATCACAAACTTTTATTGTACGATGGGAAACTCTCTAGT GCCATTGCATTCACGTACAATCCACGGGCTACAGATGCCCAGCTTTGTCTTGAATCATCTCCTAAGGACAACCCTTCAATTTTTGTTCAT TCACCACATGCACTCATGCTCCAGGATGTAAAGGCAGTTTTAACACATTCCATCCAAAGTGCAATGCATTCAATTGGAGGAGTACAAGTA CTATTTCCACTTTTTGCACAGTTGGATTACAGGCAATATTTGTCTGATGAGATTGATTTGACTATATGTTCAACCTTGCTGGCCTTTATC ATGGAATTGTTGAAGAACTCAATTGCTATGCAGGAACAGATGCTTGCCTGTAAGGGCTTCTTGGTAATAGGATATAGCCTTGAAAAGTCT TCCAAATCTCATGTTAGCAGAGCAGTACTTGAACTTTGCCTTGCATTTTCAAAATATCTGAGTAATCTGCAGAATGGGATGCCCCTGCTC AAGCAATTGTGTGATCACGTTCTTCTTAATCCTGCCATATGGATTCATACCCCAGCCAAGGTTCAACTGATGCTCTATACTTATCTGTCC ACGGAATTCATTGGTACAGTCAACATATATAACACCATTCGGAGAGTTGGAACAGTGCTTCTCATCATGCACACGCTGAAGTACTACTAC TGGGCAGTGAATCCTCAGGATCGAAGTGGTATCACCCCAAAAGGATTAGATGGACCGCGACCTAATCAAAAAGAAATGCTTTCTCTACGA GCATTCTTGTTGATGTTCATTAAGCAATTAGTGATGAAGGATTCTGGAGTAAAGGAAGATGAATTACAGGCCATTCTTAATTACCTACTG ACTATGCATGAGGATGACAATCTAATGGATGTCCTACAGCTGCTTGTTGCATTAATGTCAGAACACCCTAACTCTATGATTCCTGCTTTT GACCAAAGGAATGGGTTACGTGTTATCTACAAACTTCTGGCATCGAAAAGTGAAGGAATCAGGGTACAAGCTCTTAAGGCAATGGGTTAT TTTTTAAAACATCTGGCCCCAAAGAGGAAAGCAGAAGTCATGCTTGGACATGGATTGTTTTCATTGCTAGCTGAAAGGCTCATGCTTCAG ACAAATTTAATCACAATGACCACATATAATGTGCTGTTTGAGATTCTTATAGAACAGATTGGTACTCAGGTGATACATAAACAGCATCCA GATCCTGATTCTTCAGTGAAGATACAAAACCCTCAGATACTAAAAGTAATTGCGACCCTACTTCGAAATTCTCCCCAGTGCCCAGAGAGC ATGGAGGTTCGCAGAGCCTTTCTTTCTGACATGATTAAACTTTTTAATAACAGTAGAGAAAACAGGAGGAGCTTGCTACAATGCTCTGTG TGGCAAGAATGGATGCTTTCTCTCTGCTATTTTAATCCTAAGAATTCAGATGAGCAAAAGATAACAGAAATGGTATACGCCATATTCAGA ATCCTGCTTTACCATGCAGTCAAATATGAGTGGGGTGGCTGGCGTGTATGGGTAGACACTTTATCAATCACTCATTCAAAGGTCACTTTT GAAATACACAAAGAAAACCTTGCCAATATATTTAGGGAACAGCAAGGAAAAGTTGATGAAGAAATAGGGCTGTGTTCTTCAACTTCAGTT CAAGCAGCCTCTGGCATTAGAAGGGATATTAATGTTTCAGTAGGATCCCAGCAACCAGATACGAAGGATTCTCCTGTCTGTCCTCATTTC ACCACAAATGGTAATGAAAATTCAAGTATAGAGAAGACAAGTTCACTAGAATCTGCATCTAATATTGAACTGCAAACTACTAATACATCT TATGAAGAAATGAAAGCTGAGCAAGAAAATCAGGAGTTACCAGATGAAGGCACTTTGGAAGAAACACTGACAAATGAGACAAGGAATGCA GATGATTTAGAAGTATCTTCTGACATAATAGAAGCTGTGGCTATTTCCTCTAATTCTTTTATAACAACTGGCAAAGATTCAATGACTGTC AGTGAAGTAACTGCTTCTATAAGTTCTCCTTCAGAAGAGGATGCCTCAGAGATGCCAGAATTCTTGGATAAATCTATAGTAGAGGAAGAG GAAGATGATGATTATGTGGAACTGAAAGTAGAAGGCAGTCCTACTGAGGAAGCTAATCTACCCACAGAGCTCCAAGATAACAGTTTGTCT CCAGCTGCATCTGAAGCCGGTGAAAAACTGGACATGTTTGGTAATGATGACAAATTAATATTTCAAGAAGGAAAACCTGTTACTGAAAAG CAAACTGATACTGAAACTCAAGATTCTAAAGATTCTGGAATTCAGACTATGACAGCATCAGGGTCTTCAGCTATGTCACCAGAAACTACT GTTTCCCAAATAGCTGTAGAATCAGACCTTGGTCAGATGCTGGAGGAAGGGAAGAAAGCAACTAACCTCACTAGAGAAACCAAATTAATT AATGATTGTCATGGTAGTGTCTCTGAGGCTTCTTCTGAGCAAAAGATTGCGAAGTTGGATGTTTCCAATGTTGCTACAGATACTGAGAGG CTGGAGTTGAAGGCCAGTCCCAACGTGGAAGCACCTCAACCTCATCGACATGTGCTTGAGATATCAAGGCAACATGAGCAGCCAGGGCAA GGAATAGCACCAGATGCAGTTAATGGACAAAGGAGGGATTCCAGATCTACTGTGTTTCGTATTCCTGAGTTCAACTGGTCTCAGATGCAT CAACGTTTGCTCACTGATCTATTATTTTCAATAGAAACAGATATACAGATGTGGAGAAGCCATTCAACAAAGACAGTTATGGACTTCGTG AATAGCAGTGATAATGTCATCTTTGTACACAACACAATTCATCTCATCTCTCAAGTGATGGACAATATGGTCATGGCTTGTGGGGGTATA CTGCCATTGCTTTCAGCTGCTACATCGGCTACACATGAACTGGAAAATATTGAACCTACTCAAGGCCTTTCAATAGAAGCCTCTGTGACA TTTTTGCAGAGGCTAATTAGCCTTGTGGATGTGCTTATATTTGCAAGTTCTCTTGGCTTTACTGAAATTGAAGCTGAAAAAAGTATGTCA TCTGGAGGAATTTTGCGGCAGTGTCTCCGACTAGTTTGTGCAGTCGCAGTAAGGAATTGCTTGGAGTGTCAACAGCATTCACAACTGAAA ACTAGGGGAGATAAAGCCTTGAAACCAATGCATAGCCTTATTCCTTTAGGGAAATCTGCAGCGAAGAGCCCAGTGGACATTGTGACTGGC GGTATATCTCCAGTAAGAGATCTTGACAGGCTTCTACAGGACATGGATATTAATCGGCTTAGGGCAGTTGTTTTCAGAGACATAGAGGAT AGCAAACAAGCTCAATTTTTAGCCTTGGCAGTAGTATACTTTATCTCTGTTCTTATGGTCTCCAAGTACAGAGACATTTTGGAACCCCAA AATGAAAGGCATAGCCAGTCATGTACAGAAACTGGCAGTGAAAATGAGAATGTATCACTCTCTGAAATCACACCAGCAGCATTCAGCACT TTAACTACGGCATCAGTGGAAGAATCTGAAAGCACATCATCTGCTCGAAGGAGGGACTCAGGCATTGGGGAAGAAACAGCCACTGGTTTA GGAAGCCATGTGGAAGTAACTCCTCACACAGCACCTCCTGGTGTCAGTGCAGGCCCAGATGCAATCAGCGAGGTGCTATCTACTCTTTCT TTAGAAGTCAATAAGTCTCCGGAAACCAAAAATGATAGAGGAAATGACTTGGACACTAAGGCTACACCGTCAGTTTCAGTTTCAAAAAAC GTCAATGTGAAAGACATTCTCCGAAGCTTGGTTAACATACCAGCAGATGGAGTCACAGTGGATCCTGCCCTTCTGCCACCAGCCTGCCTT GGAGCCCTTGGTGATCTATCTGTGGAACAACCCGTGCAGTTCAGATCTTTTGACAGAAGTGTCATTGTTGCAGCAAAAAAGTCAGCAGTC TCACCTTCCACCTTTAATACAAGCATACCTACCAATGCTGTCAGTGTGGTTTCCTCAGTAGATTCAGCCCAAGCCTCAGATATGGGAGGA GAATCACCAGGCAGTAGATCATCTAATGCAAAATTGCCCTCAGTTCCAACAGTTGATTCAGTTTCACAAGATCCGGTTTCAAATATGAGT ATTACAGAGAGGCTTGAACACGCTTTGGAAAAGGCAGCTCCTCTCCTTCGTGAGATTTTTGTGGATTTTGCACCTTTTCTTTCTCGGACA CTTTTGGGTAGCCATGGACAAGAACTGCTTATAGAAGGAACAAGTCTGGTTTGCATGAAGTCGAGTAGTTCAGTTGTGGAATTGGTTATG CTACTGTGTTCTCAGGAGTGGCAAAATTCTATTCAGAAGAATGCAGGCCTTGCTTTTATCGAACTTGTCAATGAAGGAAGGTTGCTTAGC CAGACAATGAAGGATCATCTAGTAAGAGTAGCAAATGAAGCTGAATTTATCCTGAGCAGGCAGAGAGCAGAAGATATTCACAGACATGCG GAATTTGAGTCACTGTGTGCCCAGTATTCTGCAGACAAACGAGAAGATGAGAAGATGTGTGATCATTTGATAAGAGCAGCAAAATATCGT GACCACGTGACAGCAACTCAACTAATCCAGAAAATTATCAACATTCTCACAGACAAGCATGGAGCCTGGGGAAATTCTGCAGTGAGTCGT CCTCTTGAGTTCTGGCGCCTTGACTACTGGGAAGATGACTTGCGGCGCCGGCGACGATTTGTGCGTAACCCTCTAGGATCGACACATCCT GAAGCGACACTAAAAACAGCCGTGGAACATGCCACAGATGAAGATATCCTTGCTAAAGGAAAACAGTCCATCAGGAGTCAGGCTTTAGGA AATCAGAACTCAGAAAACGAGATCCTCCTGGAAGGCGATGATGATACTCTGTCATCCGTGGATGAGAAAGATTTAGAGAATCTTGCCGGT CCTGTTAGCCTGAGCACACCAGCTCAGCTTGTGGCCCCCTCTGTTGTAGTAAAGGGCACTCTTTCTGTCACCTCCTCCGAACTCTATTTT GAGGTGGATGAAGAGGATCCTAACTTCAAAAAAATCGACCCCAAGAGTGATGAGGAAAAACAAAATTAATCACTTAAATGAAAATACTTT TGCACCTCTCCAGAAACTGGATGAATTGGATTTAGGAAGTAATAAGATTGAAAATCTTCCACCGCTTATATTCAAGGACCTGAAGGAGCT GTCACAATTGAATCTTTCCTATAATCCAATCCAGAAAATTCAAGCAAACCAATTTGATTATCTTGTCAAACTCAAGTCTCTCAGCCTAGA AGGGATTGAAATTTCAAATATCCAACAAAGGATGTTTAGACCTCTTATGAATCTCTCTCACATATATTTTAAGAAATTCCAGTACTGTGG GTATGCACCACATGTTCGCAGCTGTAAACCAAACACTGATGGAATTTCATCTCTAGAGAATCTCTTGGCAAGCATTATTCAGAGAGTATT TGTCTGGGTTGTATCTGCAGTTACCTGCTTTGGAAACATTTTTGTCATTTGCATGCGACCTTATATCAGGTCTGAGAACAAGCTGTATGC CATGTCAATCATTTCTCTCTGCTGTGCCGACTGCTTAATGGGAATATATTTATTCGTGATCGGAGGCTTTGACCTAAAGTTTCGTGGAGA ATACAATAAGCATGCGCAGCTGTGGATGGAGAGTACTCATTGTCAGCTTGTAGGATCTTTGGCCATTCTGTCCACAGAAGTATCAGTTTT ACTGTTAACATTTCTGACATTGGAAAAATACATCTGCATTGTCTATCCTTTTAGATGTGTGAGACCTGGAAAATGCAGAACAATTACAGT TCTGATTCTCATTTGGATTACTGGTTTTATAGTGGCTTTCATTCCATTGAGCAATAAGGAATTTTTCAAAAACTACTATGGCACCAATGG AGTATGCTTCCCTCTTCATTCAGAAGATACAGAAAGTATTGGAGCCCAGATTTATTCAGTGGCAATTTTTCTTGGTATTAATTTGGCCGC ATTTATCATCATAGTTTTTTCCTATGGAAGCATGTTTTATAGTGTTCATCAAAGTGCCATAACAGCAACTGAAATACGGAATCAAGTTAA AAAAGAGATGATCCTTGCCAAACGTTTTTTCTTTATAGTATTTACTGATGCATTATGCTGGATACCCATTTTTGTAGTGAAATTTCTTTC ACTGCTTCAGGTAGAAATACCAGGTACCATAACCTCTTGGGTAGTGATTTTTATTCTGCCCATTAACAGTGCTTTGAACCCAATTCTCTA TACTCTGACCACAAGACCATTTAAAGAAATGATTCATCGGTTTTGGTATAACTACAGACAAAGAAAATCTATGGACAGCAAAGGTCAGAA AACATATGCTCCATCATTCATCTGGGTGGAAATGTGGCCACTGCAGGAGATGCCACCTGAGTTAATGAAGCCGGACCTTTTCACATACCC CTGTGAAATGTCACTGATTTCTCAATCAACGAGACTCAATTCCTATTCATGACTGACTCTGAAATTCATTTCTTCGCAGAGAATACTGTG GGGGTGCTTCATGAGGGATTTACTGGTATGAAATGAATACCACAAAATTAATTTATAATAATAGCTAAGATAAATATTTTACAAGGACAT GAGGAAAAATAAAAATGACTAATGCTCTTACAAAGGGAAGTAATTATATCAATAATGTATATATATTAGTAGACATTTTGCATAAGAAAT TAAGAGAAATCTACTTCAGTAACATTCATTCATTTTTCTAACATGCATTTATTGAGTACCCACTACTATGTGCATAGCATTGCAATATAG TCCTGGAAGTAGACAGTGCAGAACCTTTCAATCTGTAGATGGTGTTTAATGACAAAAGACTATACAAAGTCCATCTGCAGTTCCTAGTTT AAAGTAGAGCTTTACCTGTCATGTGCATCAGCAAGAATCATAGGCACTTTTAAATAAAGGTTTAAAGTTTTGGAATACTCAGTGTATTTG CATCATAGAAAATGTCTGACTGTTTGCAAAATAATATTCTGTTTTAAGAATCCATCTTACCTCTCTTTAAGTTTCCATACACTTGAGAGC CAACACAACATATTTATTACTAAAAAGATGCTTTGCTAGAAACTCAAAAACAGCACTTCTTTTGGCACTTCCTGCCCAGTTTTCTCTTTG CTTTAAATGAACATCATCATATGGAATTGGAATAGGAGAGTATGAGTACGGCAGAGAAGTGGATCAGAAAAACTAGAATGAGGATAAACA TTTACATTAGTGGAAACTCCTGAAATAAATCCTTGTATTGTCAGTTAACTGATTTTCAACAAGGATGCCAAGACAAAAAGGCTTTTCAAC AAACCGTGCTGTTTTAAGAACAGACCTAAGTGGTTTAATTCACCCACTTTAGATGGGTGAATGTTATGGTGTGTGAAATATCTCAGTAAA GCAGTTAAAAGGAAAAAGAGCTGGAATGCACTGATTCAGGAACTTAATTTCAGGAAGGAAAGGTCTGTATGTACACATTTCACTTTAAGC AGAAAATCTTTCTTCAAGAAATGACTTTACTTTCTCTTTGCACTGCCAGCACGTGAGATACTAACTTTTTAACTAGTTGTTCTTCTCTAG TCTCTACGTTATTAGAATTTTTTGCTTTCATAATGTGAAACCTTTAAGCAGGAGAAGAAAATGTTTTCAGATAGTTTCAAATACACCAAA AATGTTTGAAACACAAAAATACTGGAATCAAACCATAATGCACTTATTGAATATATAGTTGTATAGATTTGTTCTGAAAATAAATTATCT >In-frame_ENST00000510413_ENST00000307765_TCGA-GD-A2C5-01A_LRBA_chr4_151509200_-_RXFP1_chr4_159549790_length(amino acids)=2117AA_start in transcript=285_stop in transcript=6638 MASEDNRVPSPPPTGDDGGGGGREETPTEGGALSLKPGLPIRGIRMKFAVLTGLVEVGEVSNRDIVETVFNLLVGGQFDLEMNFIIQEGE SINCMVDLLEKCDITCQAEVWSMFTAILKKSIRNLQVCTEVGLVEKVLGKIEKVDNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGDK GRWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMDPVNNINVDKDKPYLYCFRTSKGLGYSAHFV GGCLIVTSIKSKGKGFQHCVKFDFKPQKWYMVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCGQ MTAVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLAEHHKLLLYDGKLSSAIAFTYNPRATDAQLCLESSPKDNPSIFVHSPHAL MLQDVKAVLTHSIQSAMHSIGGVQVLFPLFAQLDYRQYLSDEIDLTICSTLLAFIMELLKNSIAMQEQMLACKGFLVIGYSLEKSSKSHV SRAVLELCLAFSKYLSNLQNGMPLLKQLCDHVLLNPAIWIHTPAKVQLMLYTYLSTEFIGTVNIYNTIRRVGTVLLIMHTLKYYYWAVNP QDRSGITPKGLDGPRPNQKEMLSLRAFLLMFIKQLVMKDSGVKEDELQAILNYLLTMHEDDNLMDVLQLLVALMSEHPNSMIPAFDQRNG LRVIYKLLASKSEGIRVQALKAMGYFLKHLAPKRKAEVMLGHGLFSLLAERLMLQTNLITMTTYNVLFEILIEQIGTQVIHKQHPDPDSS VKIQNPQILKVIATLLRNSPQCPESMEVRRAFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNSDEQKITEMVYAIFRILLYH AVKYEWGGWRVWVDTLSITHSKVTFEIHKENLANIFREQQGKVDEEIGLCSSTSVQAASGIRRDINVSVGSQQPDTKDSPVCPHFTTNGN ENSSIEKTSSLESASNIELQTTNTSYEEMKAEQENQELPDEGTLEETLTNETRNADDLEVSSDIIEAVAISSNSFITTGKDSMTVSEVTA SISSPSEEDASEMPEFLDKSIVEEEEDDDYVELKVEGSPTEEANLPTELQDNSLSPAASEAGEKLDMFGNDDKLIFQEGKPVTEKQTDTE TQDSKDSGIQTMTASGSSAMSPETTVSQIAVESDLGQMLEEGKKATNLTRETKLINDCHGSVSEASSEQKIAKLDVSNVATDTERLELKA SPNVEAPQPHRHVLEISRQHEQPGQGIAPDAVNGQRRDSRSTVFRIPEFNWSQMHQRLLTDLLFSIETDIQMWRSHSTKTVMDFVNSSDN VIFVHNTIHLISQVMDNMVMACGGILPLLSAATSATHELENIEPTQGLSIEASVTFLQRLISLVDVLIFASSLGFTEIEAEKSMSSGGIL RQCLRLVCAVAVRNCLECQQHSQLKTRGDKALKPMHSLIPLGKSAAKSPVDIVTGGISPVRDLDRLLQDMDINRLRAVVFRDIEDSKQAQ FLALAVVYFISVLMVSKYRDILEPQNERHSQSCTETGSENENVSLSEITPAAFSTLTTASVEESESTSSARRRDSGIGEETATGLGSHVE VTPHTAPPGVSAGPDAISEVLSTLSLEVNKSPETKNDRGNDLDTKATPSVSVSKNVNVKDILRSLVNIPADGVTVDPALLPPACLGALGD LSVEQPVQFRSFDRSVIVAAKKSAVSPSTFNTSIPTNAVSVVSSVDSAQASDMGGESPGSRSSNAKLPSVPTVDSVSQDPVSNMSITERL EHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSQTMKD HLVRVANEAEFILSRQRAEDIHRHAEFESLCAQYSADKREDEKMCDHLIRAAKYRDHVTATQLIQKIINILTDKHGAWGNSAVSRPLEFW RLDYWEDDLRRRRRFVRNPLGSTHPEATLKTAVEHATDEDILAKGKQSIRSQALGNQNSENEILLEGDDDTLSSVDEKDLENLAGPVSLS -------------------------------------------------------------- >In-frame_ENST00000507224_ENST00000460056_TCGA-GD-A2C5-01A_LRBA_chr4_151509200_-_RXFP1_chr4_159549790_length(transcript)=8229nt_BP=6625nt CCTGCCCTGGATCTCCGCCGCCACCTCGGTCTCGCTGCTCCTGGGCGGGGGGTGAGGACGAGTCCGGAGTATCTGGGGTTTGGCGTTGTT GTCAGCCTCGGGGAGAGAGATTGGACAAATATTCTCCAAGAGGAGGAGGGCGACGCCAAGGACTTTCCACATCAACTGCTTTGGGGTATC TCCACAAGTTGGAAGAGGGACCCTTTCGTTTTGCATTGCGTGTGTTGTGCTCATTACCAGTGCAGCGACTGCCGTCCCAGGGTGACTCTG AGTTGTCCTTTATCGTGAGCTAGCAATGGCTAGCGAAGACAATCGTGTCCCTTCCCCGCCACCAACAGGTGATGACGGGGGAGGTGGAGG GAGAGAAGAAACCCCTACTGAAGGGGGTGCATTGTCTCTGAAACCAGGGCTCCCCATCAGGGGCATCAGAATGAAATTTGCCGTGTTGAC CGGTTTGGTTGAAGTTGGAGAAGTATCCAATAGGGATATTGTAGAAACTGTCTTTAACCTGTTGGTAGGAGGACAGTTTGATCTGGAAAT GAATTTCATTATCCAAGAAGGTGAGAGTATTAACTGCATGGTGGACCTACTGGAAAAATGTGACATTACGTGCCAAGCAGAAGTCTGGAG CATGTTTACAGCCATTCTGAAGAAAAGCATACGGAATCTTCAAGTCTGCACTGAAGTAGGCCTTGTTGAAAAAGTGCTTGGGAAAATTGA AAAAGTTGACAATATGATAGCAGATCTTTTGGTTGACATGTTGGGAGTGCTGGCTAGCTATAATTTGACAGTTCGCGAGCTAAAGCTTTT CTTCAGTAAACTTCAAGGAGATAAAGGACGATGGCCTCCACATGCTGGGAAGTTGCTGTCTGTGTTAAAGCATATGCCTCAGAAGTATGG TCCTGATGCCTTTTTTAACTTTCCAGGAAAGAGTGCTGCAGCTATTGCATTACCTCCTATAGCCAAATGGCCATACCAGAATGGTTTTAC ATTTCATACATGGCTTAGAATGGATCCTGTAAATAACATCAATGTAGATAAGGATAAACCATATTTGTATTGTTTCAGAACCAGCAAAGG TCTTGGCTATTCTGCTCATTTTGTTGGAGGCTGTTTGATTGTAACATCAATAAAGTCAAAAGGAAAAGGCTTTCAACACTGTGTGAAATT TGATTTCAAGCCACAAAAGTGGTATATGGTTACCATAGTACACATCTATAACCGATGGAAGAATAGTGAACTTCGATGTTATGTGAATGG TGAGCTGGCTTCCTATGGAGAGATAACATGGTTTGTCAACACTAGCGATACCTTTGACAAATGTTTCCTGGGCTCATCAGAAACAGCAGA TGCTAATAGAGTATTCTGTGGTCAGATGACTGCAGTTTACCTTTTCAGTGAAGCTCTAAATGCAGCTCAGATATTTGCTATTTATCAGTT GGGCCTGGGATACAAGGGTACATTTAAATTCAAAGCAGAAAGCGACCTTTTCCTTGCTGAGCATCACAAACTTTTATTGTACGATGGGAA ACTCTCTAGTGCCATTGCATTCACGTACAATCCACGGGCTACAGATGCCCAGCTTTGTCTTGAATCATCTCCTAAGGACAACCCTTCAAT TTTTGTTCATTCACCACATGCACTCATGCTCCAGGATGTAAAGGCAGTTTTAACACATTCCATCCAAAGTGCAATGCATTCAATTGGAGG AGTACAAGTACTATTTCCACTTTTTGCACAGTTGGATTACAGGCAATATTTGTCTGATGAGATTGATTTGACTATATGTTCAACCTTGCT GGCCTTTATCATGGAATTGTTGAAGAACTCAATTGCTATGCAGGAACAGATGCTTGCCTGTAAGGGCTTCTTGGTAATAGGATATAGCCT TGAAAAGTCTTCCAAATCTCATGTTAGCAGAGCAGTACTTGAACTTTGCCTTGCATTTTCAAAATATCTGAGTAATCTGCAGAATGGGAT GCCCCTGCTCAAGCAATTGTGTGATCACGTTCTTCTTAATCCTGCCATATGGATTCATACCCCAGCCAAGGTTCAACTGATGCTCTATAC TTATCTGTCCACGGAATTCATTGGTACAGTCAACATATATAACACCATTCGGAGAGTTGGAACAGTGCTTCTCATCATGCACACGCTGAA GTACTACTACTGGGCAGTGAATCCTCAGGATCGAAGTGGTATCACCCCAAAAGGATTAGATGGACCGCGACCTAATCAAAAAGAAATGCT TTCTCTACGAGCATTCTTGTTGATGTTCATTAAGCAATTAGTGATGAAGGATTCTGGAGTAAAGGAAGATGAATTACAGGCCATTCTTAA TTACCTACTGACTATGCATGAGGATGACAATCTAATGGATGTCCTACAGCTGCTTGTTGCATTAATGTCAGAACACCCTAACTCTATGAT TCCTGCTTTTGACCAAAGGAATGGGTTACGTGTTATCTACAAACTTCTGGCATCGAAAAGTGAAGGAATCAGGGTACAAGCTCTTAAGGC AATGGGTTATTTTTTAAAACATCTGGCCCCAAAGAGGAAAGCAGAAGTCATGCTTGGACATGGATTGTTTTCATTGCTAGCTGAAAGGCT CATGCTTCAGACAAATTTAATCACAATGACCACATATAATGTGCTGTTTGAGATTCTTATAGAACAGATTGGTACTCAGGTGATACATAA ACAGCATCCAGATCCTGATTCTTCAGTGAAGATACAAAACCCTCAGATACTAAAAGTAATTGCGACCCTACTTCGAAATTCTCCCCAGTG CCCAGAGAGCATGGAGGTTCGCAGAGCCTTTCTTTCTGACATGATTAAACTTTTTAATAACAGTAGAGAAAACAGGAGGAGCTTGCTACA ATGCTCTGTGTGGCAAGAATGGATGCTTTCTCTCTGCTATTTTAATCCTAAGAATTCAGATGAGCAAAAGATAACAGAAATGGTATACGC CATATTCAGAATCCTGCTTTACCATGCAGTCAAATATGAGTGGGGTGGCTGGCGTGTATGGGTAGACACTTTATCAATCACTCATTCAAA GGTCACTTTTGAAATACACAAAGAAAACCTTGCCAATATATTTAGGGAACAGCAAGGAAAAGTTGATGAAGAAATAGGGCTGTGTTCTTC AACTTCAGTTCAAGCAGCCTCTGGCATTAGAAGGGATATTAATGTTTCAGTAGGATCCCAGCAACCAGATACGAAGGATTCTCCTGTCTG TCCTCATTTCACCACAAATGGTAATGAAAATTCAAGTATAGAGAAGACAAGTTCACTAGAATCTGCATCTAATATTGAACTGCAAACTAC TAATACATCTTATGAAGAAATGAAAGCTGAGCAAGAAAATCAGGAGTTACCAGATGAAGGCACTTTGGAAGAAACACTGACAAATGAGAC AAGGAATGCAGATGATTTAGAAGTATCTTCTGACATAATAGAAGCTGTGGCTATTTCCTCTAATTCTTTTATAACAACTGGCAAAGATTC AATGACTGTCAGTGAAGTAACTGCTTCTATAAGTTCTCCTTCAGAAGAGGATGCCTCAGAGATGCCAGAATTCTTGGATAAATCTATAGT AGAGGAAGAGGAAGATGATGATTATGTGGAACTGAAAGTAGAAGGCAGTCCTACTGAGGAAGCTAATCTACCCACAGAGCTCCAAGATAA CAGTTTGTCTCCAGCTGCATCTGAAGCCGGTGAAAAACTGGACATGTTTGGTAATGATGACAAATTAATATTTCAAGAAGGAAAACCTGT TACTGAAAAGCAAACTGATACTGAAACTCAAGATTCTAAAGATTCTGGAATTCAGACTATGACAGCATCAGGGTCTTCAGCTATGTCACC AGAAACTACTGTTTCCCAAATAGCTGTAGAATCAGACCTTGGTCAGATGCTGGAGGAAGGGAAGAAAGCAACTAACCTCACTAGAGAAAC CAAATTAATTAATGATTGTCATGGTAGTGTCTCTGAGGCTTCTTCTGAGCAAAAGATTGCGAAGTTGGATGTTTCCAATGTTGCTACAGA TACTGAGAGGCTGGAGTTGAAGGCCAGTCCCAACGTGGAAGCACCTCAACCTCATCGACATGTGCTTGAGATATCAAGGCAACATGAGCA GCCAGGGCAAGGAATAGCACCAGATGCAGTTAATGGACAAAGGAGGGATTCCAGATCTACTGTGTTTCGTATTCCTGAGTTCAACTGGTC TCAGATGCATCAACGTTTGCTCACTGATCTATTATTTTCAATAGAAACAGATATACAGATGTGGAGAAGCCATTCAACAAAGACAGTTAT GGACTTCGTGAATAGCAGTGATAATGTCATCTTTGTACACAACACAATTCATCTCATCTCTCAAGTGATGGACAATATGGTCATGGCTTG TGGGGGTATACTGCCATTGCTTTCAGCTGCTACATCGGCTACACATGAACTGGAAAATATTGAACCTACTCAAGGCCTTTCAATAGAAGC CTCTGTGACATTTTTGCAGAGGCTAATTAGCCTTGTGGATGTGCTTATATTTGCAAGTTCTCTTGGCTTTACTGAAATTGAAGCTGAAAA AAGTATGTCATCTGGAGGAATTTTGCGGCAGTGTCTCCGACTAGTTTGTGCAGTCGCAGTAAGGAATTGCTTGGAGTGTCAACAGCATTC ACAACTGAAAACTAGGGGAGATAAAGCCTTGAAACCAATGCATAGCCTTATTCCTTTAGGGAAATCTGCAGCGAAGAGCCCAGTGGACAT TGTGACTGGCGGTATATCTCCAGTAAGAGATCTTGACAGGCTTCTACAGGACATGGATATTAATCGGCTTAGGGCAGTTGTTTTCAGAGA CATAGAGGATAGCAAACAAGCTCAATTTTTAGCCTTGGCAGTAGTATACTTTATCTCTGTTCTTATGGTCTCCAAGTACAGAGACATTTT GGAACCCCAAAATGAAAGGCATAGCCAGTCATGTACAGAAACTGGCAGTGAAAATGAGAATGTATCACTCTCTGAAATCACACCAGCAGC ATTCAGCACTTTAACTACGGCATCAGTGGAAGAATCTGAAAGCACATCATCTGCTCGAAGGAGGGACTCAGGCATTGGGGAAGAAACAGC CACTGGTTTAGGAAGCCATGTGGAAGTAACTCCTCACACAGCACCTCCTGGTGTCAGTGCAGGCCCAGATGCAATCAGCGAGGTGCTATC TACTCTTTCTTTAGAAGTCAATAAGTCTCCGGAAACCAAAAATGATAGAGGAAATGACTTGGACACTAAGGCTACACCGTCAGTTTCAGT TTCAAAAAACGTCAATGTGAAAGACATTCTCCGAAGCTTGGTTAACATACCAGCAGATGGAGTCACAGTGGATCCTGCCCTTCTGCCACC AGCCTGCCTTGGAGCCCTTGGTGATCTATCTGTGGAACAACCCGTGCAGTTCAGATCTTTTGACAGAAGTGTCATTGTTGCAGCAAAAAA GTCAGCAGTCTCACCTTCCACCTTTAATACAAGCATACCTACCAATGCTGTCAGTGTGGTTTCCTCAGTAGATTCAGCCCAAGCCTCAGA TATGGGAGGAGAATCACCAGGCAGTAGATCATCTAATGCAAAATTGCCCTCAGTTCCAACAGTTGATTCAGTTTCACAAGATCCGGTTTC AAATATGAGTATTACAGAGAGGCTTGAACACGCTTTGGAAAAGGCAGCTCCTCTCCTTCGTGAGATTTTTGTGGATTTTGCACCTTTTCT TTCTCGGACACTTTTGGGTAGCCATGGACAAGAACTGCTTATAGAAGGAACAAGTCTGGTTTGCATGAAGTCGAGTAGTTCAGTTGTGGA ATTGGTTATGCTACTGTGTTCTCAGGAGTGGCAAAATTCTATTCAGAAGAATGCAGGCCTTGCTTTTATCGAACTTGTCAATGAAGGAAG GTTGCTTAGCCAGACAATGAAGGATCATCTAGTAAGAGTAGCAAATGAAGCTGAATTTATCCTGAGCAGGCAGAGAGCAGAAGATATTCA CAGACATGCGGAATTTGAGTCACTGTGTGCCCAGTATTCTGCAGACAAACGAGAAGATGAGAAGATGTGTGATCATTTGATAAGAGCAGC AAAATATCGTGACCACGTGACAGCAACTCAACTAATCCAGAAAATTATCAACATTCTCACAGACAAGCATGGAGCCTGGGGAAATTCTGC AGTGAGTCGTCCTCTTGAGTTCTGGCGCCTTGACTACTGGGAAGATGACTTGCGGCGCCGGCGACGATTTGTGCGTAACCCTCTAGGATC GACACATCCTGAAGCGACACTAAAAACAGCCGTGGAACATGCCACAGATGAAGATATCCTTGCTAAAGGAAAACAGTCCATCAGGAGTCA GGCTTTAGGAAATCAGAACTCAGAAAACGAGATCCTCCTGGAAGGCGATGATGATACTCTGTCATCCGTGGATGAGAAAGATTTAGAGAA TCTTGCCGGTCCTGTTAGCCTGAGCACACCAGCTCAGCTTGTGGCCCCCTCTGTTGTAGTAAAGGGCACTCTTTCTGTCACCTCCTCCGA ACTCTATTTTGAGGTGGATGAAGAGGATCCTAACTTCAAAAAAATCGACCCCAAGAGTGATGAGGAAAAACAAAATTAATCACTTAAATG AAAATACTTTTGCACCTCTCCAGAAACTGGATGAATTGGATTTAGGAAGTAATAAGATTGAAAATCTTCCACCGCTTATATTCAAGGACC TGAAGGAGCTGTCACAATTGAATCTTTCCTATAATCCAATCCAGAAAATTCAAGCAAACCAATTTGATTATCTTGTCAAACTCAAGTCTC TCAGCCTAGAAGGGATTGAAATTTCAAATATCCAACAAAGGATGTTTAGACCTCTTATGAATCTCTCTCACATATATTTTAAGAAATTCC AGTACTGTGGGTATGCACCACATGTTCGCAGCTGTAAACCAAACACTGATGGAATTTCATCTCTAGAGAATCTCTTGGCAAGCATTATTC AGAGAGTATTTGTCTGGGTTGTATCTGCAGTTACCTGCTTTGGAAACATTTTTGTCATTTGCATGCGACCTTATATCAGGTCTGAGAACA AGCTGTATGCCATGTCAATCATTTCTCTCTGCTGTGCCGACTGCTTAATGGGAATATATTTATTCGTGATCGGAGGCTTTGACCTAAAGT TTCGTGGAGAATACAATAAGCATGCGCAGCTGTGGATGGAGAGTACTCATTGTCAGCTTGTAGGATCTTTGGCCATTCTGTCCACAGAAG TATCAGTTTTACTGTTAACATTTCTGACATTGGAAAAATACATCTGCATTGTCTATCCTTTTAGATGTGTGAGACCTGGAAAATGCAGAA CAATTACAGTTCTGATTCTCATTTGGATTACTGGTTTTATAGTGGCTTTCATTCCATTGAGCAATAAGGAATTTTTCAAAAACTACTATG GCACCAATGGAGTATGCTTCCCTCTTCATTCAGAAGATACAGAAAGTATTGGAGCCCAGATTTATTCAGTGGCAATTTTTCTTGGTATTA ATTTGGCCGCATTTATCATCATAGTTTTTTCCTATGGAAGCATGTTTTATAGTGTTCATCAAAGTGCCATAACAGCAACTGAAATACGGA ATCAAGTTAAAAAAGAGATGATCCTTGCCAAACGTTTTTTCTTTATAGTATTTACTGATGCATTATGCTGGATACCCATTTTTGTAGTGA AATTTCTTTCACTGCTTCAGGTAGAAATACCAGGTACCATAACCTCTTGGGTAGTGATTTTTATTCTGCCCATTAACAGTGCTTTGAACC CAATTCTCTATACTCTGACCACAAGACCATTTAAAGAAATGATTCATCGGTTTTGGTATAACTACAGACAAAGAAAATCTATGGACAGCA AAGGTCAGAAAACATATGCTCCATCATTCATCTGGGTGGAAATGTGGCCACTGCAGGAGATGCCACCTGAGTTAATGAAGCCGGACCTTT TCACATACCCCTGTGAAATGTCACTGATTTCTCAATCAACGAGACTCAATTCCTATTCATGACTGACTCTGAAATTCATTTCTTCGCAGA GAATACTGTGGGGGTGCTTCATGAGGGATTTACTGGTATGAAATGAATACCACAAAATTAATTTATAATAATAGCTAAGATAAATATTTT >In-frame_ENST00000507224_ENST00000460056_TCGA-GD-A2C5-01A_LRBA_chr4_151509200_-_RXFP1_chr4_159549790_length(amino acids)=2117AA_start in transcript=295_stop in transcript=6648 MASEDNRVPSPPPTGDDGGGGGREETPTEGGALSLKPGLPIRGIRMKFAVLTGLVEVGEVSNRDIVETVFNLLVGGQFDLEMNFIIQEGE SINCMVDLLEKCDITCQAEVWSMFTAILKKSIRNLQVCTEVGLVEKVLGKIEKVDNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGDK GRWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMDPVNNINVDKDKPYLYCFRTSKGLGYSAHFV GGCLIVTSIKSKGKGFQHCVKFDFKPQKWYMVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCGQ MTAVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLAEHHKLLLYDGKLSSAIAFTYNPRATDAQLCLESSPKDNPSIFVHSPHAL MLQDVKAVLTHSIQSAMHSIGGVQVLFPLFAQLDYRQYLSDEIDLTICSTLLAFIMELLKNSIAMQEQMLACKGFLVIGYSLEKSSKSHV SRAVLELCLAFSKYLSNLQNGMPLLKQLCDHVLLNPAIWIHTPAKVQLMLYTYLSTEFIGTVNIYNTIRRVGTVLLIMHTLKYYYWAVNP QDRSGITPKGLDGPRPNQKEMLSLRAFLLMFIKQLVMKDSGVKEDELQAILNYLLTMHEDDNLMDVLQLLVALMSEHPNSMIPAFDQRNG LRVIYKLLASKSEGIRVQALKAMGYFLKHLAPKRKAEVMLGHGLFSLLAERLMLQTNLITMTTYNVLFEILIEQIGTQVIHKQHPDPDSS VKIQNPQILKVIATLLRNSPQCPESMEVRRAFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNSDEQKITEMVYAIFRILLYH AVKYEWGGWRVWVDTLSITHSKVTFEIHKENLANIFREQQGKVDEEIGLCSSTSVQAASGIRRDINVSVGSQQPDTKDSPVCPHFTTNGN ENSSIEKTSSLESASNIELQTTNTSYEEMKAEQENQELPDEGTLEETLTNETRNADDLEVSSDIIEAVAISSNSFITTGKDSMTVSEVTA SISSPSEEDASEMPEFLDKSIVEEEEDDDYVELKVEGSPTEEANLPTELQDNSLSPAASEAGEKLDMFGNDDKLIFQEGKPVTEKQTDTE TQDSKDSGIQTMTASGSSAMSPETTVSQIAVESDLGQMLEEGKKATNLTRETKLINDCHGSVSEASSEQKIAKLDVSNVATDTERLELKA SPNVEAPQPHRHVLEISRQHEQPGQGIAPDAVNGQRRDSRSTVFRIPEFNWSQMHQRLLTDLLFSIETDIQMWRSHSTKTVMDFVNSSDN VIFVHNTIHLISQVMDNMVMACGGILPLLSAATSATHELENIEPTQGLSIEASVTFLQRLISLVDVLIFASSLGFTEIEAEKSMSSGGIL RQCLRLVCAVAVRNCLECQQHSQLKTRGDKALKPMHSLIPLGKSAAKSPVDIVTGGISPVRDLDRLLQDMDINRLRAVVFRDIEDSKQAQ FLALAVVYFISVLMVSKYRDILEPQNERHSQSCTETGSENENVSLSEITPAAFSTLTTASVEESESTSSARRRDSGIGEETATGLGSHVE VTPHTAPPGVSAGPDAISEVLSTLSLEVNKSPETKNDRGNDLDTKATPSVSVSKNVNVKDILRSLVNIPADGVTVDPALLPPACLGALGD LSVEQPVQFRSFDRSVIVAAKKSAVSPSTFNTSIPTNAVSVVSSVDSAQASDMGGESPGSRSSNAKLPSVPTVDSVSQDPVSNMSITERL EHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSQTMKD HLVRVANEAEFILSRQRAEDIHRHAEFESLCAQYSADKREDEKMCDHLIRAAKYRDHVTATQLIQKIINILTDKHGAWGNSAVSRPLEFW RLDYWEDDLRRRRRFVRNPLGSTHPEATLKTAVEHATDEDILAKGKQSIRSQALGNQNSENEILLEGDDDTLSSVDEKDLENLAGPVSLS -------------------------------------------------------------- >In-frame_ENST00000507224_ENST00000307765_TCGA-GD-A2C5-01A_LRBA_chr4_151509200_-_RXFP1_chr4_159549790_length(transcript)=9389nt_BP=6625nt CCTGCCCTGGATCTCCGCCGCCACCTCGGTCTCGCTGCTCCTGGGCGGGGGGTGAGGACGAGTCCGGAGTATCTGGGGTTTGGCGTTGTT GTCAGCCTCGGGGAGAGAGATTGGACAAATATTCTCCAAGAGGAGGAGGGCGACGCCAAGGACTTTCCACATCAACTGCTTTGGGGTATC TCCACAAGTTGGAAGAGGGACCCTTTCGTTTTGCATTGCGTGTGTTGTGCTCATTACCAGTGCAGCGACTGCCGTCCCAGGGTGACTCTG AGTTGTCCTTTATCGTGAGCTAGCAATGGCTAGCGAAGACAATCGTGTCCCTTCCCCGCCACCAACAGGTGATGACGGGGGAGGTGGAGG GAGAGAAGAAACCCCTACTGAAGGGGGTGCATTGTCTCTGAAACCAGGGCTCCCCATCAGGGGCATCAGAATGAAATTTGCCGTGTTGAC CGGTTTGGTTGAAGTTGGAGAAGTATCCAATAGGGATATTGTAGAAACTGTCTTTAACCTGTTGGTAGGAGGACAGTTTGATCTGGAAAT GAATTTCATTATCCAAGAAGGTGAGAGTATTAACTGCATGGTGGACCTACTGGAAAAATGTGACATTACGTGCCAAGCAGAAGTCTGGAG CATGTTTACAGCCATTCTGAAGAAAAGCATACGGAATCTTCAAGTCTGCACTGAAGTAGGCCTTGTTGAAAAAGTGCTTGGGAAAATTGA AAAAGTTGACAATATGATAGCAGATCTTTTGGTTGACATGTTGGGAGTGCTGGCTAGCTATAATTTGACAGTTCGCGAGCTAAAGCTTTT CTTCAGTAAACTTCAAGGAGATAAAGGACGATGGCCTCCACATGCTGGGAAGTTGCTGTCTGTGTTAAAGCATATGCCTCAGAAGTATGG TCCTGATGCCTTTTTTAACTTTCCAGGAAAGAGTGCTGCAGCTATTGCATTACCTCCTATAGCCAAATGGCCATACCAGAATGGTTTTAC ATTTCATACATGGCTTAGAATGGATCCTGTAAATAACATCAATGTAGATAAGGATAAACCATATTTGTATTGTTTCAGAACCAGCAAAGG TCTTGGCTATTCTGCTCATTTTGTTGGAGGCTGTTTGATTGTAACATCAATAAAGTCAAAAGGAAAAGGCTTTCAACACTGTGTGAAATT TGATTTCAAGCCACAAAAGTGGTATATGGTTACCATAGTACACATCTATAACCGATGGAAGAATAGTGAACTTCGATGTTATGTGAATGG TGAGCTGGCTTCCTATGGAGAGATAACATGGTTTGTCAACACTAGCGATACCTTTGACAAATGTTTCCTGGGCTCATCAGAAACAGCAGA TGCTAATAGAGTATTCTGTGGTCAGATGACTGCAGTTTACCTTTTCAGTGAAGCTCTAAATGCAGCTCAGATATTTGCTATTTATCAGTT GGGCCTGGGATACAAGGGTACATTTAAATTCAAAGCAGAAAGCGACCTTTTCCTTGCTGAGCATCACAAACTTTTATTGTACGATGGGAA ACTCTCTAGTGCCATTGCATTCACGTACAATCCACGGGCTACAGATGCCCAGCTTTGTCTTGAATCATCTCCTAAGGACAACCCTTCAAT TTTTGTTCATTCACCACATGCACTCATGCTCCAGGATGTAAAGGCAGTTTTAACACATTCCATCCAAAGTGCAATGCATTCAATTGGAGG AGTACAAGTACTATTTCCACTTTTTGCACAGTTGGATTACAGGCAATATTTGTCTGATGAGATTGATTTGACTATATGTTCAACCTTGCT GGCCTTTATCATGGAATTGTTGAAGAACTCAATTGCTATGCAGGAACAGATGCTTGCCTGTAAGGGCTTCTTGGTAATAGGATATAGCCT TGAAAAGTCTTCCAAATCTCATGTTAGCAGAGCAGTACTTGAACTTTGCCTTGCATTTTCAAAATATCTGAGTAATCTGCAGAATGGGAT GCCCCTGCTCAAGCAATTGTGTGATCACGTTCTTCTTAATCCTGCCATATGGATTCATACCCCAGCCAAGGTTCAACTGATGCTCTATAC TTATCTGTCCACGGAATTCATTGGTACAGTCAACATATATAACACCATTCGGAGAGTTGGAACAGTGCTTCTCATCATGCACACGCTGAA GTACTACTACTGGGCAGTGAATCCTCAGGATCGAAGTGGTATCACCCCAAAAGGATTAGATGGACCGCGACCTAATCAAAAAGAAATGCT TTCTCTACGAGCATTCTTGTTGATGTTCATTAAGCAATTAGTGATGAAGGATTCTGGAGTAAAGGAAGATGAATTACAGGCCATTCTTAA TTACCTACTGACTATGCATGAGGATGACAATCTAATGGATGTCCTACAGCTGCTTGTTGCATTAATGTCAGAACACCCTAACTCTATGAT TCCTGCTTTTGACCAAAGGAATGGGTTACGTGTTATCTACAAACTTCTGGCATCGAAAAGTGAAGGAATCAGGGTACAAGCTCTTAAGGC AATGGGTTATTTTTTAAAACATCTGGCCCCAAAGAGGAAAGCAGAAGTCATGCTTGGACATGGATTGTTTTCATTGCTAGCTGAAAGGCT CATGCTTCAGACAAATTTAATCACAATGACCACATATAATGTGCTGTTTGAGATTCTTATAGAACAGATTGGTACTCAGGTGATACATAA ACAGCATCCAGATCCTGATTCTTCAGTGAAGATACAAAACCCTCAGATACTAAAAGTAATTGCGACCCTACTTCGAAATTCTCCCCAGTG CCCAGAGAGCATGGAGGTTCGCAGAGCCTTTCTTTCTGACATGATTAAACTTTTTAATAACAGTAGAGAAAACAGGAGGAGCTTGCTACA ATGCTCTGTGTGGCAAGAATGGATGCTTTCTCTCTGCTATTTTAATCCTAAGAATTCAGATGAGCAAAAGATAACAGAAATGGTATACGC CATATTCAGAATCCTGCTTTACCATGCAGTCAAATATGAGTGGGGTGGCTGGCGTGTATGGGTAGACACTTTATCAATCACTCATTCAAA GGTCACTTTTGAAATACACAAAGAAAACCTTGCCAATATATTTAGGGAACAGCAAGGAAAAGTTGATGAAGAAATAGGGCTGTGTTCTTC AACTTCAGTTCAAGCAGCCTCTGGCATTAGAAGGGATATTAATGTTTCAGTAGGATCCCAGCAACCAGATACGAAGGATTCTCCTGTCTG TCCTCATTTCACCACAAATGGTAATGAAAATTCAAGTATAGAGAAGACAAGTTCACTAGAATCTGCATCTAATATTGAACTGCAAACTAC TAATACATCTTATGAAGAAATGAAAGCTGAGCAAGAAAATCAGGAGTTACCAGATGAAGGCACTTTGGAAGAAACACTGACAAATGAGAC AAGGAATGCAGATGATTTAGAAGTATCTTCTGACATAATAGAAGCTGTGGCTATTTCCTCTAATTCTTTTATAACAACTGGCAAAGATTC AATGACTGTCAGTGAAGTAACTGCTTCTATAAGTTCTCCTTCAGAAGAGGATGCCTCAGAGATGCCAGAATTCTTGGATAAATCTATAGT AGAGGAAGAGGAAGATGATGATTATGTGGAACTGAAAGTAGAAGGCAGTCCTACTGAGGAAGCTAATCTACCCACAGAGCTCCAAGATAA CAGTTTGTCTCCAGCTGCATCTGAAGCCGGTGAAAAACTGGACATGTTTGGTAATGATGACAAATTAATATTTCAAGAAGGAAAACCTGT TACTGAAAAGCAAACTGATACTGAAACTCAAGATTCTAAAGATTCTGGAATTCAGACTATGACAGCATCAGGGTCTTCAGCTATGTCACC AGAAACTACTGTTTCCCAAATAGCTGTAGAATCAGACCTTGGTCAGATGCTGGAGGAAGGGAAGAAAGCAACTAACCTCACTAGAGAAAC CAAATTAATTAATGATTGTCATGGTAGTGTCTCTGAGGCTTCTTCTGAGCAAAAGATTGCGAAGTTGGATGTTTCCAATGTTGCTACAGA TACTGAGAGGCTGGAGTTGAAGGCCAGTCCCAACGTGGAAGCACCTCAACCTCATCGACATGTGCTTGAGATATCAAGGCAACATGAGCA GCCAGGGCAAGGAATAGCACCAGATGCAGTTAATGGACAAAGGAGGGATTCCAGATCTACTGTGTTTCGTATTCCTGAGTTCAACTGGTC TCAGATGCATCAACGTTTGCTCACTGATCTATTATTTTCAATAGAAACAGATATACAGATGTGGAGAAGCCATTCAACAAAGACAGTTAT GGACTTCGTGAATAGCAGTGATAATGTCATCTTTGTACACAACACAATTCATCTCATCTCTCAAGTGATGGACAATATGGTCATGGCTTG TGGGGGTATACTGCCATTGCTTTCAGCTGCTACATCGGCTACACATGAACTGGAAAATATTGAACCTACTCAAGGCCTTTCAATAGAAGC CTCTGTGACATTTTTGCAGAGGCTAATTAGCCTTGTGGATGTGCTTATATTTGCAAGTTCTCTTGGCTTTACTGAAATTGAAGCTGAAAA AAGTATGTCATCTGGAGGAATTTTGCGGCAGTGTCTCCGACTAGTTTGTGCAGTCGCAGTAAGGAATTGCTTGGAGTGTCAACAGCATTC ACAACTGAAAACTAGGGGAGATAAAGCCTTGAAACCAATGCATAGCCTTATTCCTTTAGGGAAATCTGCAGCGAAGAGCCCAGTGGACAT TGTGACTGGCGGTATATCTCCAGTAAGAGATCTTGACAGGCTTCTACAGGACATGGATATTAATCGGCTTAGGGCAGTTGTTTTCAGAGA CATAGAGGATAGCAAACAAGCTCAATTTTTAGCCTTGGCAGTAGTATACTTTATCTCTGTTCTTATGGTCTCCAAGTACAGAGACATTTT GGAACCCCAAAATGAAAGGCATAGCCAGTCATGTACAGAAACTGGCAGTGAAAATGAGAATGTATCACTCTCTGAAATCACACCAGCAGC ATTCAGCACTTTAACTACGGCATCAGTGGAAGAATCTGAAAGCACATCATCTGCTCGAAGGAGGGACTCAGGCATTGGGGAAGAAACAGC CACTGGTTTAGGAAGCCATGTGGAAGTAACTCCTCACACAGCACCTCCTGGTGTCAGTGCAGGCCCAGATGCAATCAGCGAGGTGCTATC TACTCTTTCTTTAGAAGTCAATAAGTCTCCGGAAACCAAAAATGATAGAGGAAATGACTTGGACACTAAGGCTACACCGTCAGTTTCAGT TTCAAAAAACGTCAATGTGAAAGACATTCTCCGAAGCTTGGTTAACATACCAGCAGATGGAGTCACAGTGGATCCTGCCCTTCTGCCACC AGCCTGCCTTGGAGCCCTTGGTGATCTATCTGTGGAACAACCCGTGCAGTTCAGATCTTTTGACAGAAGTGTCATTGTTGCAGCAAAAAA GTCAGCAGTCTCACCTTCCACCTTTAATACAAGCATACCTACCAATGCTGTCAGTGTGGTTTCCTCAGTAGATTCAGCCCAAGCCTCAGA TATGGGAGGAGAATCACCAGGCAGTAGATCATCTAATGCAAAATTGCCCTCAGTTCCAACAGTTGATTCAGTTTCACAAGATCCGGTTTC AAATATGAGTATTACAGAGAGGCTTGAACACGCTTTGGAAAAGGCAGCTCCTCTCCTTCGTGAGATTTTTGTGGATTTTGCACCTTTTCT TTCTCGGACACTTTTGGGTAGCCATGGACAAGAACTGCTTATAGAAGGAACAAGTCTGGTTTGCATGAAGTCGAGTAGTTCAGTTGTGGA ATTGGTTATGCTACTGTGTTCTCAGGAGTGGCAAAATTCTATTCAGAAGAATGCAGGCCTTGCTTTTATCGAACTTGTCAATGAAGGAAG GTTGCTTAGCCAGACAATGAAGGATCATCTAGTAAGAGTAGCAAATGAAGCTGAATTTATCCTGAGCAGGCAGAGAGCAGAAGATATTCA CAGACATGCGGAATTTGAGTCACTGTGTGCCCAGTATTCTGCAGACAAACGAGAAGATGAGAAGATGTGTGATCATTTGATAAGAGCAGC AAAATATCGTGACCACGTGACAGCAACTCAACTAATCCAGAAAATTATCAACATTCTCACAGACAAGCATGGAGCCTGGGGAAATTCTGC AGTGAGTCGTCCTCTTGAGTTCTGGCGCCTTGACTACTGGGAAGATGACTTGCGGCGCCGGCGACGATTTGTGCGTAACCCTCTAGGATC GACACATCCTGAAGCGACACTAAAAACAGCCGTGGAACATGCCACAGATGAAGATATCCTTGCTAAAGGAAAACAGTCCATCAGGAGTCA GGCTTTAGGAAATCAGAACTCAGAAAACGAGATCCTCCTGGAAGGCGATGATGATACTCTGTCATCCGTGGATGAGAAAGATTTAGAGAA TCTTGCCGGTCCTGTTAGCCTGAGCACACCAGCTCAGCTTGTGGCCCCCTCTGTTGTAGTAAAGGGCACTCTTTCTGTCACCTCCTCCGA ACTCTATTTTGAGGTGGATGAAGAGGATCCTAACTTCAAAAAAATCGACCCCAAGAGTGATGAGGAAAAACAAAATTAATCACTTAAATG AAAATACTTTTGCACCTCTCCAGAAACTGGATGAATTGGATTTAGGAAGTAATAAGATTGAAAATCTTCCACCGCTTATATTCAAGGACC TGAAGGAGCTGTCACAATTGAATCTTTCCTATAATCCAATCCAGAAAATTCAAGCAAACCAATTTGATTATCTTGTCAAACTCAAGTCTC TCAGCCTAGAAGGGATTGAAATTTCAAATATCCAACAAAGGATGTTTAGACCTCTTATGAATCTCTCTCACATATATTTTAAGAAATTCC AGTACTGTGGGTATGCACCACATGTTCGCAGCTGTAAACCAAACACTGATGGAATTTCATCTCTAGAGAATCTCTTGGCAAGCATTATTC AGAGAGTATTTGTCTGGGTTGTATCTGCAGTTACCTGCTTTGGAAACATTTTTGTCATTTGCATGCGACCTTATATCAGGTCTGAGAACA AGCTGTATGCCATGTCAATCATTTCTCTCTGCTGTGCCGACTGCTTAATGGGAATATATTTATTCGTGATCGGAGGCTTTGACCTAAAGT TTCGTGGAGAATACAATAAGCATGCGCAGCTGTGGATGGAGAGTACTCATTGTCAGCTTGTAGGATCTTTGGCCATTCTGTCCACAGAAG TATCAGTTTTACTGTTAACATTTCTGACATTGGAAAAATACATCTGCATTGTCTATCCTTTTAGATGTGTGAGACCTGGAAAATGCAGAA CAATTACAGTTCTGATTCTCATTTGGATTACTGGTTTTATAGTGGCTTTCATTCCATTGAGCAATAAGGAATTTTTCAAAAACTACTATG GCACCAATGGAGTATGCTTCCCTCTTCATTCAGAAGATACAGAAAGTATTGGAGCCCAGATTTATTCAGTGGCAATTTTTCTTGGTATTA ATTTGGCCGCATTTATCATCATAGTTTTTTCCTATGGAAGCATGTTTTATAGTGTTCATCAAAGTGCCATAACAGCAACTGAAATACGGA ATCAAGTTAAAAAAGAGATGATCCTTGCCAAACGTTTTTTCTTTATAGTATTTACTGATGCATTATGCTGGATACCCATTTTTGTAGTGA AATTTCTTTCACTGCTTCAGGTAGAAATACCAGGTACCATAACCTCTTGGGTAGTGATTTTTATTCTGCCCATTAACAGTGCTTTGAACC CAATTCTCTATACTCTGACCACAAGACCATTTAAAGAAATGATTCATCGGTTTTGGTATAACTACAGACAAAGAAAATCTATGGACAGCA AAGGTCAGAAAACATATGCTCCATCATTCATCTGGGTGGAAATGTGGCCACTGCAGGAGATGCCACCTGAGTTAATGAAGCCGGACCTTT TCACATACCCCTGTGAAATGTCACTGATTTCTCAATCAACGAGACTCAATTCCTATTCATGACTGACTCTGAAATTCATTTCTTCGCAGA GAATACTGTGGGGGTGCTTCATGAGGGATTTACTGGTATGAAATGAATACCACAAAATTAATTTATAATAATAGCTAAGATAAATATTTT ACAAGGACATGAGGAAAAATAAAAATGACTAATGCTCTTACAAAGGGAAGTAATTATATCAATAATGTATATATATTAGTAGACATTTTG CATAAGAAATTAAGAGAAATCTACTTCAGTAACATTCATTCATTTTTCTAACATGCATTTATTGAGTACCCACTACTATGTGCATAGCAT TGCAATATAGTCCTGGAAGTAGACAGTGCAGAACCTTTCAATCTGTAGATGGTGTTTAATGACAAAAGACTATACAAAGTCCATCTGCAG TTCCTAGTTTAAAGTAGAGCTTTACCTGTCATGTGCATCAGCAAGAATCATAGGCACTTTTAAATAAAGGTTTAAAGTTTTGGAATACTC AGTGTATTTGCATCATAGAAAATGTCTGACTGTTTGCAAAATAATATTCTGTTTTAAGAATCCATCTTACCTCTCTTTAAGTTTCCATAC ACTTGAGAGCCAACACAACATATTTATTACTAAAAAGATGCTTTGCTAGAAACTCAAAAACAGCACTTCTTTTGGCACTTCCTGCCCAGT TTTCTCTTTGCTTTAAATGAACATCATCATATGGAATTGGAATAGGAGAGTATGAGTACGGCAGAGAAGTGGATCAGAAAAACTAGAATG AGGATAAACATTTACATTAGTGGAAACTCCTGAAATAAATCCTTGTATTGTCAGTTAACTGATTTTCAACAAGGATGCCAAGACAAAAAG GCTTTTCAACAAACCGTGCTGTTTTAAGAACAGACCTAAGTGGTTTAATTCACCCACTTTAGATGGGTGAATGTTATGGTGTGTGAAATA TCTCAGTAAAGCAGTTAAAAGGAAAAAGAGCTGGAATGCACTGATTCAGGAACTTAATTTCAGGAAGGAAAGGTCTGTATGTACACATTT CACTTTAAGCAGAAAATCTTTCTTCAAGAAATGACTTTACTTTCTCTTTGCACTGCCAGCACGTGAGATACTAACTTTTTAACTAGTTGT TCTTCTCTAGTCTCTACGTTATTAGAATTTTTTGCTTTCATAATGTGAAACCTTTAAGCAGGAGAAGAAAATGTTTTCAGATAGTTTCAA ATACACCAAAAATGTTTGAAACACAAAAATACTGGAATCAAACCATAATGCACTTATTGAATATATAGTTGTATAGATTTGTTCTGAAAA >In-frame_ENST00000507224_ENST00000307765_TCGA-GD-A2C5-01A_LRBA_chr4_151509200_-_RXFP1_chr4_159549790_length(amino acids)=2117AA_start in transcript=295_stop in transcript=6648 MASEDNRVPSPPPTGDDGGGGGREETPTEGGALSLKPGLPIRGIRMKFAVLTGLVEVGEVSNRDIVETVFNLLVGGQFDLEMNFIIQEGE SINCMVDLLEKCDITCQAEVWSMFTAILKKSIRNLQVCTEVGLVEKVLGKIEKVDNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGDK GRWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMDPVNNINVDKDKPYLYCFRTSKGLGYSAHFV GGCLIVTSIKSKGKGFQHCVKFDFKPQKWYMVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCGQ MTAVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLAEHHKLLLYDGKLSSAIAFTYNPRATDAQLCLESSPKDNPSIFVHSPHAL MLQDVKAVLTHSIQSAMHSIGGVQVLFPLFAQLDYRQYLSDEIDLTICSTLLAFIMELLKNSIAMQEQMLACKGFLVIGYSLEKSSKSHV SRAVLELCLAFSKYLSNLQNGMPLLKQLCDHVLLNPAIWIHTPAKVQLMLYTYLSTEFIGTVNIYNTIRRVGTVLLIMHTLKYYYWAVNP QDRSGITPKGLDGPRPNQKEMLSLRAFLLMFIKQLVMKDSGVKEDELQAILNYLLTMHEDDNLMDVLQLLVALMSEHPNSMIPAFDQRNG LRVIYKLLASKSEGIRVQALKAMGYFLKHLAPKRKAEVMLGHGLFSLLAERLMLQTNLITMTTYNVLFEILIEQIGTQVIHKQHPDPDSS VKIQNPQILKVIATLLRNSPQCPESMEVRRAFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNSDEQKITEMVYAIFRILLYH AVKYEWGGWRVWVDTLSITHSKVTFEIHKENLANIFREQQGKVDEEIGLCSSTSVQAASGIRRDINVSVGSQQPDTKDSPVCPHFTTNGN ENSSIEKTSSLESASNIELQTTNTSYEEMKAEQENQELPDEGTLEETLTNETRNADDLEVSSDIIEAVAISSNSFITTGKDSMTVSEVTA SISSPSEEDASEMPEFLDKSIVEEEEDDDYVELKVEGSPTEEANLPTELQDNSLSPAASEAGEKLDMFGNDDKLIFQEGKPVTEKQTDTE TQDSKDSGIQTMTASGSSAMSPETTVSQIAVESDLGQMLEEGKKATNLTRETKLINDCHGSVSEASSEQKIAKLDVSNVATDTERLELKA SPNVEAPQPHRHVLEISRQHEQPGQGIAPDAVNGQRRDSRSTVFRIPEFNWSQMHQRLLTDLLFSIETDIQMWRSHSTKTVMDFVNSSDN VIFVHNTIHLISQVMDNMVMACGGILPLLSAATSATHELENIEPTQGLSIEASVTFLQRLISLVDVLIFASSLGFTEIEAEKSMSSGGIL RQCLRLVCAVAVRNCLECQQHSQLKTRGDKALKPMHSLIPLGKSAAKSPVDIVTGGISPVRDLDRLLQDMDINRLRAVVFRDIEDSKQAQ FLALAVVYFISVLMVSKYRDILEPQNERHSQSCTETGSENENVSLSEITPAAFSTLTTASVEESESTSSARRRDSGIGEETATGLGSHVE VTPHTAPPGVSAGPDAISEVLSTLSLEVNKSPETKNDRGNDLDTKATPSVSVSKNVNVKDILRSLVNIPADGVTVDPALLPPACLGALGD LSVEQPVQFRSFDRSVIVAAKKSAVSPSTFNTSIPTNAVSVVSSVDSAQASDMGGESPGSRSSNAKLPSVPTVDSVSQDPVSNMSITERL EHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSQTMKD HLVRVANEAEFILSRQRAEDIHRHAEFESLCAQYSADKREDEKMCDHLIRAAKYRDHVTATQLIQKIINILTDKHGAWGNSAVSRPLEFW RLDYWEDDLRRRRRFVRNPLGSTHPEATLKTAVEHATDEDILAKGKQSIRSQALGNQNSENEILLEGDDDTLSSVDEKDLENLAGPVSLS -------------------------------------------------------------- |
Top |
Fusion Gene PPI Analysis for LRBA-RXFP1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
Related Drugs for LRBA-RXFP1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
Related Diseases for LRBA-RXFP1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | LRBA | C3553512 | IMMUNODEFICIENCY, COMMON VARIABLE, 8, WITH AUTOIMMUNITY | 7 | CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT |
Tgene | RXFP1 | C0014175 | Endometriosis | 1 | CTD_human |
Tgene | RXFP1 | C0269102 | Endometrioma | 1 | CTD_human |