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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:MACROD2-SPTLC3 (FusionGDB2 ID:50415) |
Fusion Gene Summary for MACROD2-SPTLC3 |
Fusion gene summary |
Fusion gene information | Fusion gene name: MACROD2-SPTLC3 | Fusion gene ID: 50415 | Hgene | Tgene | Gene symbol | MACROD2 | SPTLC3 | Gene ID | 140733 | 55304 |
Gene name | mono-ADP ribosylhydrolase 2 | serine palmitoyltransferase long chain base subunit 3 | |
Synonyms | C20orf133|C2orf133 | C20orf38|LCB 3|LCB2B|LCB3|SPT 3|SPT3|SPTLC2L|dJ718P11|dJ718P11.1|hLCB2b | |
Cytomap | 20p12.1 | 20p12.1 | |
Type of gene | protein-coding | protein-coding | |
Description | ADP-ribose glycohydrolase MACROD2MACRO domain containing 2MACRO domain-containing protein 2O-acetyl-ADP-ribose deacetylase MACROD2[Protein ADP-ribosylaspartate] hydrolase MACROD2[Protein ADP-ribosylglutamate] hydrolase[Protein ADP-ribosylglutamate] | serine palmitoyltransferase 3long chain base biosynthesis protein 2blong chain base biosynthesis protein 3serine palmitoyltransferase, long chain base subunit 2-like (aminotransferase 2)serine-palmitoyl-CoA transferase 3 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | A1Z1Q3 | . | |
Ensembl transtripts involved in fusion gene | ENST00000217246, ENST00000310348, ENST00000464883, ENST00000402914, ENST00000378058, ENST00000407045, | ENST00000399002, ENST00000378194, ENST00000476791, | |
Fusion gene scores | * DoF score | 22 X 20 X 10=4400 | 1 X 2 X 2=4 |
# samples | 25 | 2 | |
** MAII score | log2(25/4400*10)=-4.13750352374993 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(2/4*10)=2.32192809488736 | |
Context | PubMed: MACROD2 [Title/Abstract] AND SPTLC3 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | MACROD2(14066374)-SPTLC3(13090759), # samples:3 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | MACROD2 | GO:0042278 | purine nucleoside metabolic process | 21257746 |
Hgene | MACROD2 | GO:0051725 | protein de-ADP-ribosylation | 23474712 |
Tgene | SPTLC3 | GO:0046520 | sphingoid biosynthetic process | 19648650 |
Fusion gene breakpoints across MACROD2 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across SPTLC3 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | SKCM | TCGA-EE-A29D-06A | MACROD2 | chr20 | 14066374 | + | SPTLC3 | chr20 | 13090759 | + |
ChimerDB4 | SKCM | TCGA-EE-A29D-06A | MACROD2 | chr20 | 14066374 | + | SPTLC3 | chr20 | 13090759 | + |
ChimerDB4 | SKCM | TCGA-EE-A29D-06A | MACROD2 | chr20 | 14066374 | - | SPTLC3 | chr20 | 13090759 | + |
ChimerDB4 | PCPG | TCGA-QT-A5XJ-01A | MACROD2 | chr20 | 14474154 | - | SPTLC3 | chr20 | 13071731 | + |
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Fusion Gene ORF analysis for MACROD2-SPTLC3 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000217246 | ENST00000399002 | MACROD2 | chr20 | 14066374 | + | SPTLC3 | chr20 | 13090759 | + |
In-frame | ENST00000217246 | ENST00000378194 | MACROD2 | chr20 | 14066374 | + | SPTLC3 | chr20 | 13090759 | + |
5CDS-intron | ENST00000217246 | ENST00000476791 | MACROD2 | chr20 | 14066374 | + | SPTLC3 | chr20 | 13090759 | + |
In-frame | ENST00000310348 | ENST00000399002 | MACROD2 | chr20 | 14066374 | + | SPTLC3 | chr20 | 13090759 | + |
In-frame | ENST00000310348 | ENST00000378194 | MACROD2 | chr20 | 14066374 | + | SPTLC3 | chr20 | 13090759 | + |
5CDS-intron | ENST00000310348 | ENST00000476791 | MACROD2 | chr20 | 14066374 | + | SPTLC3 | chr20 | 13090759 | + |
intron-3CDS | ENST00000464883 | ENST00000399002 | MACROD2 | chr20 | 14066374 | + | SPTLC3 | chr20 | 13090759 | + |
intron-3CDS | ENST00000464883 | ENST00000378194 | MACROD2 | chr20 | 14066374 | + | SPTLC3 | chr20 | 13090759 | + |
intron-intron | ENST00000464883 | ENST00000476791 | MACROD2 | chr20 | 14066374 | + | SPTLC3 | chr20 | 13090759 | + |
intron-3CDS | ENST00000402914 | ENST00000399002 | MACROD2 | chr20 | 14066374 | + | SPTLC3 | chr20 | 13090759 | + |
intron-3CDS | ENST00000402914 | ENST00000378194 | MACROD2 | chr20 | 14066374 | + | SPTLC3 | chr20 | 13090759 | + |
intron-intron | ENST00000402914 | ENST00000476791 | MACROD2 | chr20 | 14066374 | + | SPTLC3 | chr20 | 13090759 | + |
intron-3CDS | ENST00000378058 | ENST00000399002 | MACROD2 | chr20 | 14066374 | + | SPTLC3 | chr20 | 13090759 | + |
intron-3CDS | ENST00000378058 | ENST00000378194 | MACROD2 | chr20 | 14066374 | + | SPTLC3 | chr20 | 13090759 | + |
intron-intron | ENST00000378058 | ENST00000476791 | MACROD2 | chr20 | 14066374 | + | SPTLC3 | chr20 | 13090759 | + |
intron-3CDS | ENST00000407045 | ENST00000399002 | MACROD2 | chr20 | 14066374 | + | SPTLC3 | chr20 | 13090759 | + |
intron-3CDS | ENST00000407045 | ENST00000378194 | MACROD2 | chr20 | 14066374 | + | SPTLC3 | chr20 | 13090759 | + |
intron-intron | ENST00000407045 | ENST00000476791 | MACROD2 | chr20 | 14066374 | + | SPTLC3 | chr20 | 13090759 | + |
In-frame | ENST00000217246 | ENST00000399002 | MACROD2 | chr20 | 14474154 | - | SPTLC3 | chr20 | 13071731 | + |
In-frame | ENST00000217246 | ENST00000378194 | MACROD2 | chr20 | 14474154 | - | SPTLC3 | chr20 | 13071731 | + |
5CDS-intron | ENST00000217246 | ENST00000476791 | MACROD2 | chr20 | 14474154 | - | SPTLC3 | chr20 | 13071731 | + |
In-frame | ENST00000310348 | ENST00000399002 | MACROD2 | chr20 | 14474154 | - | SPTLC3 | chr20 | 13071731 | + |
In-frame | ENST00000310348 | ENST00000378194 | MACROD2 | chr20 | 14474154 | - | SPTLC3 | chr20 | 13071731 | + |
5CDS-intron | ENST00000310348 | ENST00000476791 | MACROD2 | chr20 | 14474154 | - | SPTLC3 | chr20 | 13071731 | + |
intron-3CDS | ENST00000464883 | ENST00000399002 | MACROD2 | chr20 | 14474154 | - | SPTLC3 | chr20 | 13071731 | + |
intron-3CDS | ENST00000464883 | ENST00000378194 | MACROD2 | chr20 | 14474154 | - | SPTLC3 | chr20 | 13071731 | + |
intron-intron | ENST00000464883 | ENST00000476791 | MACROD2 | chr20 | 14474154 | - | SPTLC3 | chr20 | 13071731 | + |
intron-3CDS | ENST00000402914 | ENST00000399002 | MACROD2 | chr20 | 14474154 | - | SPTLC3 | chr20 | 13071731 | + |
intron-3CDS | ENST00000402914 | ENST00000378194 | MACROD2 | chr20 | 14474154 | - | SPTLC3 | chr20 | 13071731 | + |
intron-intron | ENST00000402914 | ENST00000476791 | MACROD2 | chr20 | 14474154 | - | SPTLC3 | chr20 | 13071731 | + |
intron-3CDS | ENST00000378058 | ENST00000399002 | MACROD2 | chr20 | 14474154 | - | SPTLC3 | chr20 | 13071731 | + |
intron-3CDS | ENST00000378058 | ENST00000378194 | MACROD2 | chr20 | 14474154 | - | SPTLC3 | chr20 | 13071731 | + |
intron-intron | ENST00000378058 | ENST00000476791 | MACROD2 | chr20 | 14474154 | - | SPTLC3 | chr20 | 13071731 | + |
intron-3CDS | ENST00000407045 | ENST00000399002 | MACROD2 | chr20 | 14474154 | - | SPTLC3 | chr20 | 13071731 | + |
intron-3CDS | ENST00000407045 | ENST00000378194 | MACROD2 | chr20 | 14474154 | - | SPTLC3 | chr20 | 13071731 | + |
intron-intron | ENST00000407045 | ENST00000476791 | MACROD2 | chr20 | 14474154 | - | SPTLC3 | chr20 | 13071731 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000217246 | MACROD2 | chr20 | 14066374 | + | ENST00000399002 | SPTLC3 | chr20 | 13090759 | + | 3396 | 666 | 341 | 1498 | 385 |
ENST00000217246 | MACROD2 | chr20 | 14066374 | + | ENST00000378194 | SPTLC3 | chr20 | 13090759 | + | 1361 | 666 | 733 | 1233 | 166 |
ENST00000310348 | MACROD2 | chr20 | 14066374 | + | ENST00000399002 | SPTLC3 | chr20 | 13090759 | + | 3001 | 271 | 0 | 1103 | 367 |
ENST00000310348 | MACROD2 | chr20 | 14066374 | + | ENST00000378194 | SPTLC3 | chr20 | 13090759 | + | 966 | 271 | 338 | 838 | 166 |
ENST00000217246 | MACROD2 | chr20 | 14474154 | - | ENST00000399002 | SPTLC3 | chr20 | 13071731 | + | 3645 | 696 | 341 | 1747 | 468 |
ENST00000217246 | MACROD2 | chr20 | 14474154 | - | ENST00000378194 | SPTLC3 | chr20 | 13071731 | + | 1610 | 696 | 341 | 1078 | 245 |
ENST00000310348 | MACROD2 | chr20 | 14474154 | - | ENST00000399002 | SPTLC3 | chr20 | 13071731 | + | 3250 | 301 | 0 | 1352 | 450 |
ENST00000310348 | MACROD2 | chr20 | 14474154 | - | ENST00000378194 | SPTLC3 | chr20 | 13071731 | + | 1215 | 301 | 0 | 683 | 227 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000217246 | ENST00000399002 | MACROD2 | chr20 | 14066374 | + | SPTLC3 | chr20 | 13090759 | + | 0.000627034 | 0.999373 |
ENST00000217246 | ENST00000378194 | MACROD2 | chr20 | 14066374 | + | SPTLC3 | chr20 | 13090759 | + | 0.015354791 | 0.9846452 |
ENST00000310348 | ENST00000399002 | MACROD2 | chr20 | 14066374 | + | SPTLC3 | chr20 | 13090759 | + | 0.000415259 | 0.99958473 |
ENST00000310348 | ENST00000378194 | MACROD2 | chr20 | 14066374 | + | SPTLC3 | chr20 | 13090759 | + | 0.010395538 | 0.9896045 |
ENST00000217246 | ENST00000399002 | MACROD2 | chr20 | 14474154 | - | SPTLC3 | chr20 | 13071731 | + | 0.000969061 | 0.99903095 |
ENST00000217246 | ENST00000378194 | MACROD2 | chr20 | 14474154 | - | SPTLC3 | chr20 | 13071731 | + | 0.006601544 | 0.9933984 |
ENST00000310348 | ENST00000399002 | MACROD2 | chr20 | 14474154 | - | SPTLC3 | chr20 | 13071731 | + | 0.000652974 | 0.99934703 |
ENST00000310348 | ENST00000378194 | MACROD2 | chr20 | 14474154 | - | SPTLC3 | chr20 | 13071731 | + | 0.003197805 | 0.9968022 |
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Fusion Genomic Features for MACROD2-SPTLC3 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for MACROD2-SPTLC3 |
Go to FGviewer for the breakpoints of chr20:14066374-chr20:13090759 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
MACROD2 | . |
FUNCTION: Removes ADP-ribose from asparatate and glutamate residues in proteins bearing a single ADP-ribose moiety (PubMed:23474714, PubMed:23474712). Inactive towards proteins bearing poly-ADP-ribose (PubMed:23474714, PubMed:23474712). Deacetylates O-acetyl-ADP ribose, a signaling molecule generated by the deacetylation of acetylated lysine residues in histones and other proteins (PubMed:21257746). {ECO:0000269|PubMed:21257746, ECO:0000269|PubMed:23474712, ECO:0000269|PubMed:23474714}. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000217246 | + | 3 | 17 | 6_9 | 90.33333333333333 | 426.0 | Compositional bias | Note=Poly-Lys |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000310348 | + | 3 | 18 | 6_9 | 90.33333333333333 | 449.0 | Compositional bias | Note=Poly-Lys |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000217246 | - | 4 | 17 | 6_9 | 100.33333333333333 | 426.0 | Compositional bias | Note=Poly-Lys |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000310348 | - | 4 | 18 | 6_9 | 100.33333333333333 | 449.0 | Compositional bias | Note=Poly-Lys |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000217246 | + | 3 | 17 | 77_79 | 90.33333333333333 | 426.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000217246 | + | 3 | 17 | 90_92 | 90.33333333333333 | 426.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000310348 | + | 3 | 18 | 77_79 | 90.33333333333333 | 449.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000310348 | + | 3 | 18 | 90_92 | 90.33333333333333 | 449.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000217246 | - | 4 | 17 | 77_79 | 100.33333333333333 | 426.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000217246 | - | 4 | 17 | 90_92 | 100.33333333333333 | 426.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000217246 | - | 4 | 17 | 97_102 | 100.33333333333333 | 426.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000310348 | - | 4 | 18 | 77_79 | 100.33333333333333 | 449.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000310348 | - | 4 | 18 | 90_92 | 100.33333333333333 | 449.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000310348 | - | 4 | 18 | 97_102 | 100.33333333333333 | 449.0 | Region | Substrate binding |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000217246 | + | 3 | 17 | 247_388 | 90.33333333333333 | 426.0 | Compositional bias | Note=Glu-rich |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000310348 | + | 3 | 18 | 247_388 | 90.33333333333333 | 449.0 | Compositional bias | Note=Glu-rich |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000378058 | + | 1 | 10 | 247_388 | 0.0 | 214.0 | Compositional bias | Note=Glu-rich |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000378058 | + | 1 | 10 | 6_9 | 0.0 | 214.0 | Compositional bias | Note=Poly-Lys |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000402914 | + | 1 | 14 | 247_388 | 0 | 214.0 | Compositional bias | Note=Glu-rich |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000402914 | + | 1 | 14 | 6_9 | 0 | 214.0 | Compositional bias | Note=Poly-Lys |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000407045 | + | 1 | 6 | 247_388 | 0 | 99.0 | Compositional bias | Note=Glu-rich |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000407045 | + | 1 | 6 | 6_9 | 0 | 99.0 | Compositional bias | Note=Poly-Lys |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000217246 | - | 4 | 17 | 247_388 | 100.33333333333333 | 426.0 | Compositional bias | Note=Glu-rich |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000310348 | - | 4 | 18 | 247_388 | 100.33333333333333 | 449.0 | Compositional bias | Note=Glu-rich |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000378058 | - | 1 | 10 | 247_388 | 0.0 | 214.0 | Compositional bias | Note=Glu-rich |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000378058 | - | 1 | 10 | 6_9 | 0.0 | 214.0 | Compositional bias | Note=Poly-Lys |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000402914 | - | 1 | 14 | 247_388 | 0 | 214.0 | Compositional bias | Note=Glu-rich |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000402914 | - | 1 | 14 | 6_9 | 0 | 214.0 | Compositional bias | Note=Poly-Lys |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000407045 | - | 1 | 6 | 247_388 | 0 | 99.0 | Compositional bias | Note=Glu-rich |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000407045 | - | 1 | 6 | 6_9 | 0 | 99.0 | Compositional bias | Note=Poly-Lys |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000217246 | + | 3 | 17 | 59_240 | 90.33333333333333 | 426.0 | Domain | Macro |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000310348 | + | 3 | 18 | 59_240 | 90.33333333333333 | 449.0 | Domain | Macro |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000378058 | + | 1 | 10 | 59_240 | 0.0 | 214.0 | Domain | Macro |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000402914 | + | 1 | 14 | 59_240 | 0 | 214.0 | Domain | Macro |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000407045 | + | 1 | 6 | 59_240 | 0 | 99.0 | Domain | Macro |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000217246 | - | 4 | 17 | 59_240 | 100.33333333333333 | 426.0 | Domain | Macro |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000310348 | - | 4 | 18 | 59_240 | 100.33333333333333 | 449.0 | Domain | Macro |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000378058 | - | 1 | 10 | 59_240 | 0.0 | 214.0 | Domain | Macro |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000402914 | - | 1 | 14 | 59_240 | 0 | 214.0 | Domain | Macro |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000407045 | - | 1 | 6 | 59_240 | 0 | 99.0 | Domain | Macro |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000217246 | + | 3 | 17 | 185_191 | 90.33333333333333 | 426.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000217246 | + | 3 | 17 | 97_102 | 90.33333333333333 | 426.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000310348 | + | 3 | 18 | 185_191 | 90.33333333333333 | 449.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000310348 | + | 3 | 18 | 97_102 | 90.33333333333333 | 449.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000378058 | + | 1 | 10 | 185_191 | 0.0 | 214.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000378058 | + | 1 | 10 | 77_79 | 0.0 | 214.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000378058 | + | 1 | 10 | 90_92 | 0.0 | 214.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000378058 | + | 1 | 10 | 97_102 | 0.0 | 214.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000402914 | + | 1 | 14 | 185_191 | 0 | 214.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000402914 | + | 1 | 14 | 77_79 | 0 | 214.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000402914 | + | 1 | 14 | 90_92 | 0 | 214.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000402914 | + | 1 | 14 | 97_102 | 0 | 214.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000407045 | + | 1 | 6 | 185_191 | 0 | 99.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000407045 | + | 1 | 6 | 77_79 | 0 | 99.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000407045 | + | 1 | 6 | 90_92 | 0 | 99.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14066374 | chr20:13090759 | ENST00000407045 | + | 1 | 6 | 97_102 | 0 | 99.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000217246 | - | 4 | 17 | 185_191 | 100.33333333333333 | 426.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000310348 | - | 4 | 18 | 185_191 | 100.33333333333333 | 449.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000378058 | - | 1 | 10 | 185_191 | 0.0 | 214.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000378058 | - | 1 | 10 | 77_79 | 0.0 | 214.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000378058 | - | 1 | 10 | 90_92 | 0.0 | 214.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000378058 | - | 1 | 10 | 97_102 | 0.0 | 214.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000402914 | - | 1 | 14 | 185_191 | 0 | 214.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000402914 | - | 1 | 14 | 77_79 | 0 | 214.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000402914 | - | 1 | 14 | 90_92 | 0 | 214.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000402914 | - | 1 | 14 | 97_102 | 0 | 214.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000407045 | - | 1 | 6 | 185_191 | 0 | 99.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000407045 | - | 1 | 6 | 77_79 | 0 | 99.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000407045 | - | 1 | 6 | 90_92 | 0 | 99.0 | Region | Substrate binding |
Hgene | MACROD2 | chr20:14474154 | chr20:13071731 | ENST00000407045 | - | 1 | 6 | 97_102 | 0 | 99.0 | Region | Substrate binding |
Tgene | SPTLC3 | chr20:14066374 | chr20:13090759 | ENST00000399002 | 5 | 12 | 59_79 | 275.3333333333333 | 553.0 | Transmembrane | Helical | |
Tgene | SPTLC3 | chr20:14474154 | chr20:13071731 | ENST00000399002 | 3 | 12 | 59_79 | 202.33333333333334 | 553.0 | Transmembrane | Helical |
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Fusion Gene Sequence for MACROD2-SPTLC3 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000217246_ENST00000399002_TCGA-EE-A29D-06A_MACROD2_chr20_14066374_+_SPTLC3_chr20_13090759_length(transcript)=3396nt_BP=666nt GCGTGCGCCCTGGGGCCCAAGTTGGGGCGCGCCGTGGCTAGAACACGGAGAGCGGCGGGCAGTGCAGCCAATGGGAGGCGGCGCTGCCTA GCGGCTGGTAGGCGGTGCCTGCGCGGGTGTTAGGTTAGCGCGAGGCGTGACCTAGTTGACAGGCTCTGAGGTGCTGCTGTGGCGGCGTCC GCGGGGCTGAGGCGGGTGGGAGCCGGAGCCGAGCGCGGGCTGAGGGAGGAGGGCGGCGACTGGAGAGCGGCGAGCGGCGAGCAGCGCAGG ACGCAGAGCCTCTTTCACTTTTTCCCTGCTGAGTGCCCCCTCCCACCCCTCCCACTCCACACACACCCTGTTTGCCCGTGAGCCTGGGGA ACTTGCAGCTTAAAGCCAGCCACCCCCACGGCAACATGTACCCCAGCAACAAGAAGAAAAAGGTGTGGAGAGAGGAGAAAGAACGTTTAT TGAAGATGACCTTAGAAGAGAGACGCAAAGAATACCTAAGAGACTATATTCCCCTGAACAGCATTCTATCATGGAAGGAGGAGATGAAGG GCAAGGGCCAAAATGATGAAGAAAATACTCAGGAAACATCCCAGGTGAAGAAAAGTTTGACTGAAAAAGTTTCTCTCTATAGAGGTGACA TCACATTGCTAGAGGTAGATGCTATAGTCAATGCCGACACACAAAGCCTAGAGAAGCTCCTGAGAGATGCTGTCATCTATGGCCAGCCTC GAACCCGCAGAGCTTGGAAAAAGATTCTCATCCTGGTGGAGGGTGTCTACAGCATGGAAGGTTCCATCGTGCATCTGCCCCAGATCATAG CTCTAAAGAAGAAATACAAGGCTTACCTCTACATAGATGAAGCTCACAGTATTGGGGCCGTGGGCCCAACCGGCCGGGGTGTCACGGAGT TCTTTGGACTAGACCCTCATGAAGTTGATGTGCTCATGGGCACATTCACCAAAAGTTTTGGAGCTTCAGGAGGTTACATAGCTGGAAGGA AGGACCTCGTGGATTATTTACGGGTTCACTCGCATAGTGCTGTTTATGCTTCATCCATGAGCCCACCGATAGCAGAGCAAATCATCAGAT CACTAAAACTTATCATGGGACTGGATGGGACCACTCAAGGGCTGCAGAGAGTACAGCAACTTGCGAAAAACACAAGATACTTCAGACAAA GACTGCAGGAAATGGGATTCATTATCTATGGCAATGAGAATGCTTCTGTTGTTCCTCTGCTTCTTTATATGCCTGGTAAAGTAGCGGCTT TTGCAAGGCATATGCTAGAGAAAAAAATTGGAGTGGTGGTCGTGGGATTTCCAGCCACTCCCCTCGCAGAAGCTCGGGCTCGGTTTTGTG TTTCAGCGGCACATACCCGGGAGATGTTAGACACGGTTTTAGAAGCTCTTGATGAAATGGGTGATCTCTTGCAACTGAAATATTCCCGGC ACAAGAAGTCAGCACGTCCTGAGCTCTATGATGAGACGAGCTTTGAACTCGAAGATTAAGTTTCCTGGTCCTGAATGACACATAAAGACT TTGCGAGAAAGACCTCCCTCCTTGCCTCACAAGGAATATAAATGGATTTCTCCCCCTTCCTCAGGACAATTTTGGTTCCCAGACCAGCTT GATTGAACTGAGGGAGACGTTGTTGTTTTTAATGTCTCCAGCTTGGACTGCAGAGACAAAAACATGATTCCAGATTTAAGTCTCTCTTCT TCCAAGTATTCTACTAGAAATACACACACACACACACACACACTTCTGAGAATATTTTTAATGGCAATAAGCCTGTGTTTTAGCTGCTAC TGTGCAGACCCTTTCAGGGATTCCAACCAAATGCAAATGAGAGAATTTAAAATTTTTATTCAGTAAGTTCACTATGTGTTTACTTATTCC ATCTGCAGATGTAAGTGAGTGTGGTGGACAGTAGCCACCTTCCTTGTTCCACTCATAAAAGCATCAGCTAGATCTCATCTGTATCATGGG AAGTTCCAGGCAGGAGGGTAAAGAAATGTTGTTTCTACCATTTGTCACATTTGGACGTTTTTCACAGACAAGTGTCAAAAGACATAGTTA ATGTTTCGAGGGGGAAAGCAGAACTGATCAACTGCGACTAGAGACGTCTTTGAAGGAAATTTTCCTTTTCCTCTTGCTGGTCTCCTACAG TTTTACAGCTGAGCTTTTGAGGTTTGGAAAATTCAAGATGTTTGTTTCATAAGAAAAGGGGCAGAAAGCAAGCACAAGACACTTTTAGGT CTAGACTAAAATGGTAGTTACAACAATTTGAACCTTGTTGGTGCAGTGCACGGTGAATGCTTACCCTGCACAGCCTCTATTACCTTAAGG AATTAGTTGTCATTTTCCTATTGAATTTTGAGTAAATGGTGAAATTCAGTGTCCTTTAGAATCGACTCCCAAGACTATATTTGAAGAATG CATTGATTCAAGAAGGACATTTAAAAGCAAATTCTGACTTTTTCAAGACCAACACACTTGTTTAGGCCTATTAAATTGTACTATCACTTG TTACATGCCCTCTGAATTGGGAGAAAGTGGGCTTGCACACTTTGAGGTAACTAACTGTAATTTACTTGTGTTCTCTCTTTCTTGCTCTCC TTCTCAACATGAACACAAACCTCTATGGAAAAGTAGCCTCTTGTTAATCTGATCTAGTTTGTATGGAAAAAGCCCATGGAGAACCTTATC TTTAACAAGCTCCCAGAGGGTGCCCAGATTTGGAAATTCTAGAGAGCAGTGGTGACCTTTTAGCAAAGCTTCTGTAACAGTTCGAATGAG TTGCAGAACATTCCACTCCATCAAATGACACTGTAAACAAATCACTTCAAGAGAGGCTTGGTTTTGTGTGGCACAGATGGACCCAAGCTT TCATGCTGTGCACTGAGATAGAAACTCCACCCGCAGCGCCTGCGATGGATGGAGCAGTGTGCCCTGATGCTCAAAGCGTATTAAAGGAAA AAAAGTGATCAGCATGGAAAGTTTTTATGGGGAAATTATAACTCCAAGTGGGTGCATTGGTTTAAAAATGGATCACAATGATAGAGTTCT TCATGAATGTTTACAAGTTGTAAGGAATACCGTTAGTGAAAGAGGAAAAGAAGTGGGTTCTGAAAATGCAGTTTCCCATCCAATGATTTT GATAACAAAATTCCAACTTTTCTCAATGAAACTGATGCAGTATTATTTGTGCAAATAAAATGTGTCATAAATATGCAAAGAAAGGGAGAC ATACTGTTCTTATCTTGAATATGTGCATTTAAATGAATTGTCCAAAATGCATAAATGCCTTGCGTTCTATAAAGGAAACAGGAGGTCAAA >In-frame_ENST00000217246_ENST00000399002_TCGA-EE-A29D-06A_MACROD2_chr20_14066374_+_SPTLC3_chr20_13090759_length(amino acids)=385AA_start in transcript=341_stop in transcript=1498 MPVSLGNLQLKASHPHGNMYPSNKKKKVWREEKERLLKMTLEERRKEYLRDYIPLNSILSWKEEMKGKGQNDEENTQETSQVKKSLTEKV SLYRGDITLLEVDAIVNADTQSLEKLLRDAVIYGQPRTRRAWKKILILVEGVYSMEGSIVHLPQIIALKKKYKAYLYIDEAHSIGAVGPT GRGVTEFFGLDPHEVDVLMGTFTKSFGASGGYIAGRKDLVDYLRVHSHSAVYASSMSPPIAEQIIRSLKLIMGLDGTTQGLQRVQQLAKN TRYFRQRLQEMGFIIYGNENASVVPLLLYMPGKVAAFARHMLEKKIGVVVVGFPATPLAEARARFCVSAAHTREMLDTVLEALDEMGDLL -------------------------------------------------------------- >In-frame_ENST00000217246_ENST00000378194_TCGA-EE-A29D-06A_MACROD2_chr20_14066374_+_SPTLC3_chr20_13090759_length(transcript)=1361nt_BP=666nt GCGTGCGCCCTGGGGCCCAAGTTGGGGCGCGCCGTGGCTAGAACACGGAGAGCGGCGGGCAGTGCAGCCAATGGGAGGCGGCGCTGCCTA GCGGCTGGTAGGCGGTGCCTGCGCGGGTGTTAGGTTAGCGCGAGGCGTGACCTAGTTGACAGGCTCTGAGGTGCTGCTGTGGCGGCGTCC GCGGGGCTGAGGCGGGTGGGAGCCGGAGCCGAGCGCGGGCTGAGGGAGGAGGGCGGCGACTGGAGAGCGGCGAGCGGCGAGCAGCGCAGG ACGCAGAGCCTCTTTCACTTTTTCCCTGCTGAGTGCCCCCTCCCACCCCTCCCACTCCACACACACCCTGTTTGCCCGTGAGCCTGGGGA ACTTGCAGCTTAAAGCCAGCCACCCCCACGGCAACATGTACCCCAGCAACAAGAAGAAAAAGGTGTGGAGAGAGGAGAAAGAACGTTTAT TGAAGATGACCTTAGAAGAGAGACGCAAAGAATACCTAAGAGACTATATTCCCCTGAACAGCATTCTATCATGGAAGGAGGAGATGAAGG GCAAGGGCCAAAATGATGAAGAAAATACTCAGGAAACATCCCAGGTGAAGAAAAGTTTGACTGAAAAAGTTTCTCTCTATAGAGGTGACA TCACATTGCTAGAGGTAGATGCTATAGTCAATGCCGACACACAAAGCCTAGAGAAGCTCCTGAGAGATGCTGTCATCTATGGCCAGCCTC GAACCCGCAGAGCTTGGAAAAAGATTCTCATCCTGGTGGAGGGTGTCTACAGGACCTCGTGGATTATTTACGGGTTCACTCGCATAGTGC TGTTTATGCTTCATCCATGAGCCCACCGATAGCAGAGCAAATCATCAGATCACTAAAACTTATCATGGGACTGGATGGGACCACTCAAGG GCTGCAGAGAGTACAGCAACTTGCGAAAAACACAAGATACTTCAGACAAAGACTGCAGGAAATGGGATTCATTATCTATGGCAATGAGAA TGCTTCTGTTGTTCCTCTGCTTCTTTATATGCCTGGTAAAGTAGCGGCTTTTGCAAGGCATATGCTAGAGAAAAAAATTGGAGTGGTGGT CGTGGGATTTCCAGCCACTCCCCTCGCAGAAGCTCGGGCTCGGTTTTGTGTTTCAGCGGCACATACCCGGGAGATGTTAGACACGGTGAG TACACCACAGGCCAACGGGATCTCAGTACCAGTACCTTGGATTCAAAGCAAGTCCTTTTGTTGAGACAGCTTGGGGTTCTCTGGGTTTCT CTTGGGTTATTTAGGAAAACAACACTGACAAAAGTCACTGCCAAAAAACAAGAGCTCGTCAACAACAGCCAACACTGTGACCACTCAGTA >In-frame_ENST00000217246_ENST00000378194_TCGA-EE-A29D-06A_MACROD2_chr20_14066374_+_SPTLC3_chr20_13090759_length(amino acids)=166AA_start in transcript=733_stop in transcript=1233 MEKDSHPGGGCLQDLVDYLRVHSHSAVYASSMSPPIAEQIIRSLKLIMGLDGTTQGLQRVQQLAKNTRYFRQRLQEMGFIIYGNENASVV -------------------------------------------------------------- >In-frame_ENST00000310348_ENST00000399002_TCGA-EE-A29D-06A_MACROD2_chr20_14066374_+_SPTLC3_chr20_13090759_length(transcript)=3001nt_BP=271nt ATGTACCCCAGCAACAAGAAGAAAAAGGTGTGGAGAGAGGAGAAAGAACGTTTATTGAAGATGACCTTAGAAGAGAGACGCAAAGAATAC CTAAGAGACTATATTCCCCTGAACAGCATTCTATCATGGAAGGAGGAGATGAAGGGCAAGGGCCAAAATGATGAAGAAAATACTCAGGAA ACATCCCAGGTGAAGAAAAGTTTGACTGAAAAAGTTTCTCTCTATAGAGGTGACATCACATTGCTAGAGGTAGATGCTATAGTCAATGCC GACACACAAAGCCTAGAGAAGCTCCTGAGAGATGCTGTCATCTATGGCCAGCCTCGAACCCGCAGAGCTTGGAAAAAGATTCTCATCCTG GTGGAGGGTGTCTACAGCATGGAAGGTTCCATCGTGCATCTGCCCCAGATCATAGCTCTAAAGAAGAAATACAAGGCTTACCTCTACATA GATGAAGCTCACAGTATTGGGGCCGTGGGCCCAACCGGCCGGGGTGTCACGGAGTTCTTTGGACTAGACCCTCATGAAGTTGATGTGCTC ATGGGCACATTCACCAAAAGTTTTGGAGCTTCAGGAGGTTACATAGCTGGAAGGAAGGACCTCGTGGATTATTTACGGGTTCACTCGCAT AGTGCTGTTTATGCTTCATCCATGAGCCCACCGATAGCAGAGCAAATCATCAGATCACTAAAACTTATCATGGGACTGGATGGGACCACT CAAGGGCTGCAGAGAGTACAGCAACTTGCGAAAAACACAAGATACTTCAGACAAAGACTGCAGGAAATGGGATTCATTATCTATGGCAAT GAGAATGCTTCTGTTGTTCCTCTGCTTCTTTATATGCCTGGTAAAGTAGCGGCTTTTGCAAGGCATATGCTAGAGAAAAAAATTGGAGTG GTGGTCGTGGGATTTCCAGCCACTCCCCTCGCAGAAGCTCGGGCTCGGTTTTGTGTTTCAGCGGCACATACCCGGGAGATGTTAGACACG GTTTTAGAAGCTCTTGATGAAATGGGTGATCTCTTGCAACTGAAATATTCCCGGCACAAGAAGTCAGCACGTCCTGAGCTCTATGATGAG ACGAGCTTTGAACTCGAAGATTAAGTTTCCTGGTCCTGAATGACACATAAAGACTTTGCGAGAAAGACCTCCCTCCTTGCCTCACAAGGA ATATAAATGGATTTCTCCCCCTTCCTCAGGACAATTTTGGTTCCCAGACCAGCTTGATTGAACTGAGGGAGACGTTGTTGTTTTTAATGT CTCCAGCTTGGACTGCAGAGACAAAAACATGATTCCAGATTTAAGTCTCTCTTCTTCCAAGTATTCTACTAGAAATACACACACACACAC ACACACACTTCTGAGAATATTTTTAATGGCAATAAGCCTGTGTTTTAGCTGCTACTGTGCAGACCCTTTCAGGGATTCCAACCAAATGCA AATGAGAGAATTTAAAATTTTTATTCAGTAAGTTCACTATGTGTTTACTTATTCCATCTGCAGATGTAAGTGAGTGTGGTGGACAGTAGC CACCTTCCTTGTTCCACTCATAAAAGCATCAGCTAGATCTCATCTGTATCATGGGAAGTTCCAGGCAGGAGGGTAAAGAAATGTTGTTTC TACCATTTGTCACATTTGGACGTTTTTCACAGACAAGTGTCAAAAGACATAGTTAATGTTTCGAGGGGGAAAGCAGAACTGATCAACTGC GACTAGAGACGTCTTTGAAGGAAATTTTCCTTTTCCTCTTGCTGGTCTCCTACAGTTTTACAGCTGAGCTTTTGAGGTTTGGAAAATTCA AGATGTTTGTTTCATAAGAAAAGGGGCAGAAAGCAAGCACAAGACACTTTTAGGTCTAGACTAAAATGGTAGTTACAACAATTTGAACCT TGTTGGTGCAGTGCACGGTGAATGCTTACCCTGCACAGCCTCTATTACCTTAAGGAATTAGTTGTCATTTTCCTATTGAATTTTGAGTAA ATGGTGAAATTCAGTGTCCTTTAGAATCGACTCCCAAGACTATATTTGAAGAATGCATTGATTCAAGAAGGACATTTAAAAGCAAATTCT GACTTTTTCAAGACCAACACACTTGTTTAGGCCTATTAAATTGTACTATCACTTGTTACATGCCCTCTGAATTGGGAGAAAGTGGGCTTG CACACTTTGAGGTAACTAACTGTAATTTACTTGTGTTCTCTCTTTCTTGCTCTCCTTCTCAACATGAACACAAACCTCTATGGAAAAGTA GCCTCTTGTTAATCTGATCTAGTTTGTATGGAAAAAGCCCATGGAGAACCTTATCTTTAACAAGCTCCCAGAGGGTGCCCAGATTTGGAA ATTCTAGAGAGCAGTGGTGACCTTTTAGCAAAGCTTCTGTAACAGTTCGAATGAGTTGCAGAACATTCCACTCCATCAAATGACACTGTA AACAAATCACTTCAAGAGAGGCTTGGTTTTGTGTGGCACAGATGGACCCAAGCTTTCATGCTGTGCACTGAGATAGAAACTCCACCCGCA GCGCCTGCGATGGATGGAGCAGTGTGCCCTGATGCTCAAAGCGTATTAAAGGAAAAAAAGTGATCAGCATGGAAAGTTTTTATGGGGAAA TTATAACTCCAAGTGGGTGCATTGGTTTAAAAATGGATCACAATGATAGAGTTCTTCATGAATGTTTACAAGTTGTAAGGAATACCGTTA GTGAAAGAGGAAAAGAAGTGGGTTCTGAAAATGCAGTTTCCCATCCAATGATTTTGATAACAAAATTCCAACTTTTCTCAATGAAACTGA TGCAGTATTATTTGTGCAAATAAAATGTGTCATAAATATGCAAAGAAAGGGAGACATACTGTTCTTATCTTGAATATGTGCATTTAAATG AATTGTCCAAAATGCATAAATGCCTTGCGTTCTATAAAGGAAACAGGAGGTCAAAAAGACAGCGAGATATCTAGTCCTTCCACAAGGTAT >In-frame_ENST00000310348_ENST00000399002_TCGA-EE-A29D-06A_MACROD2_chr20_14066374_+_SPTLC3_chr20_13090759_length(amino acids)=367AA_start in transcript=0_stop in transcript=1103 MYPSNKKKKVWREEKERLLKMTLEERRKEYLRDYIPLNSILSWKEEMKGKGQNDEENTQETSQVKKSLTEKVSLYRGDITLLEVDAIVNA DTQSLEKLLRDAVIYGQPRTRRAWKKILILVEGVYSMEGSIVHLPQIIALKKKYKAYLYIDEAHSIGAVGPTGRGVTEFFGLDPHEVDVL MGTFTKSFGASGGYIAGRKDLVDYLRVHSHSAVYASSMSPPIAEQIIRSLKLIMGLDGTTQGLQRVQQLAKNTRYFRQRLQEMGFIIYGN ENASVVPLLLYMPGKVAAFARHMLEKKIGVVVVGFPATPLAEARARFCVSAAHTREMLDTVLEALDEMGDLLQLKYSRHKKSARPELYDE -------------------------------------------------------------- >In-frame_ENST00000310348_ENST00000378194_TCGA-EE-A29D-06A_MACROD2_chr20_14066374_+_SPTLC3_chr20_13090759_length(transcript)=966nt_BP=271nt ATGTACCCCAGCAACAAGAAGAAAAAGGTGTGGAGAGAGGAGAAAGAACGTTTATTGAAGATGACCTTAGAAGAGAGACGCAAAGAATAC CTAAGAGACTATATTCCCCTGAACAGCATTCTATCATGGAAGGAGGAGATGAAGGGCAAGGGCCAAAATGATGAAGAAAATACTCAGGAA ACATCCCAGGTGAAGAAAAGTTTGACTGAAAAAGTTTCTCTCTATAGAGGTGACATCACATTGCTAGAGGTAGATGCTATAGTCAATGCC GACACACAAAGCCTAGAGAAGCTCCTGAGAGATGCTGTCATCTATGGCCAGCCTCGAACCCGCAGAGCTTGGAAAAAGATTCTCATCCTG GTGGAGGGTGTCTACAGGACCTCGTGGATTATTTACGGGTTCACTCGCATAGTGCTGTTTATGCTTCATCCATGAGCCCACCGATAGCAG AGCAAATCATCAGATCACTAAAACTTATCATGGGACTGGATGGGACCACTCAAGGGCTGCAGAGAGTACAGCAACTTGCGAAAAACACAA GATACTTCAGACAAAGACTGCAGGAAATGGGATTCATTATCTATGGCAATGAGAATGCTTCTGTTGTTCCTCTGCTTCTTTATATGCCTG GTAAAGTAGCGGCTTTTGCAAGGCATATGCTAGAGAAAAAAATTGGAGTGGTGGTCGTGGGATTTCCAGCCACTCCCCTCGCAGAAGCTC GGGCTCGGTTTTGTGTTTCAGCGGCACATACCCGGGAGATGTTAGACACGGTGAGTACACCACAGGCCAACGGGATCTCAGTACCAGTAC CTTGGATTCAAAGCAAGTCCTTTTGTTGAGACAGCTTGGGGTTCTCTGGGTTTCTCTTGGGTTATTTAGGAAAACAACACTGACAAAAGT >In-frame_ENST00000310348_ENST00000378194_TCGA-EE-A29D-06A_MACROD2_chr20_14066374_+_SPTLC3_chr20_13090759_length(amino acids)=166AA_start in transcript=338_stop in transcript=838 MEKDSHPGGGCLQDLVDYLRVHSHSAVYASSMSPPIAEQIIRSLKLIMGLDGTTQGLQRVQQLAKNTRYFRQRLQEMGFIIYGNENASVV -------------------------------------------------------------- >In-frame_ENST00000217246_ENST00000399002_TCGA-QT-A5XJ-01A_MACROD2_chr20_14474154_-_SPTLC3_chr20_13071731_length(transcript)=3645nt_BP=696nt GCGTGCGCCCTGGGGCCCAAGTTGGGGCGCGCCGTGGCTAGAACACGGAGAGCGGCGGGCAGTGCAGCCAATGGGAGGCGGCGCTGCCTA GCGGCTGGTAGGCGGTGCCTGCGCGGGTGTTAGGTTAGCGCGAGGCGTGACCTAGTTGACAGGCTCTGAGGTGCTGCTGTGGCGGCGTCC GCGGGGCTGAGGCGGGTGGGAGCCGGAGCCGAGCGCGGGCTGAGGGAGGAGGGCGGCGACTGGAGAGCGGCGAGCGGCGAGCAGCGCAGG ACGCAGAGCCTCTTTCACTTTTTCCCTGCTGAGTGCCCCCTCCCACCCCTCCCACTCCACACACACCCTGTTTGCCCGTGAGCCTGGGGA ACTTGCAGCTTAAAGCCAGCCACCCCCACGGCAACATGTACCCCAGCAACAAGAAGAAAAAGGTGTGGAGAGAGGAGAAAGAACGTTTAT TGAAGATGACCTTAGAAGAGAGACGCAAAGAATACCTAAGAGACTATATTCCCCTGAACAGCATTCTATCATGGAAGGAGGAGATGAAGG GCAAGGGCCAAAATGATGAAGAAAATACTCAGGAAACATCCCAGGTGAAGAAAAGTTTGACTGAAAAAGTTTCTCTCTATAGAGGTGACA TCACATTGCTAGAGGTAGATGCTATAGTCAATGCCGCAAATGCCAGTCTTCTTGGAGGAGGAGGTGGCACCTTGGATAAGCACAAGGAGT TGGAGGACCTTGTGGCTAAGTTCCTGAATGTGGAAGCAGCTATGGTCTTTGGGATGGGATTCGCAACTAACTCAATGAATATCCCAGCAT TAGTTGGAAAGGGATGCCTCATTTTAAGTGATGAGTTAAACCACACATCGCTTGTGCTTGGGGCCCGACTCTCAGGTGCAACCATAAGAA TCTTCAAACACAACAACACACAAAGCCTAGAGAAGCTCCTGAGAGATGCTGTCATCTATGGCCAGCCTCGAACCCGCAGAGCTTGGAAAA AGATTCTCATCCTGGTGGAGGGTGTCTACAGCATGGAAGGTTCCATCGTGCATCTGCCCCAGATCATAGCTCTAAAGAAGAAATACAAGG CTTACCTCTACATAGATGAAGCTCACAGTATTGGGGCCGTGGGCCCAACCGGCCGGGGTGTCACGGAGTTCTTTGGACTAGACCCTCATG AAGTTGATGTGCTCATGGGCACATTCACCAAAAGTTTTGGAGCTTCAGGAGGTTACATAGCTGGAAGGAAGGACCTCGTGGATTATTTAC GGGTTCACTCGCATAGTGCTGTTTATGCTTCATCCATGAGCCCACCGATAGCAGAGCAAATCATCAGATCACTAAAACTTATCATGGGAC TGGATGGGACCACTCAAGGGCTGCAGAGAGTACAGCAACTTGCGAAAAACACAAGATACTTCAGACAAAGACTGCAGGAAATGGGATTCA TTATCTATGGCAATGAGAATGCTTCTGTTGTTCCTCTGCTTCTTTATATGCCTGGTAAAGTAGCGGCTTTTGCAAGGCATATGCTAGAGA AAAAAATTGGAGTGGTGGTCGTGGGATTTCCAGCCACTCCCCTCGCAGAAGCTCGGGCTCGGTTTTGTGTTTCAGCGGCACATACCCGGG AGATGTTAGACACGGTTTTAGAAGCTCTTGATGAAATGGGTGATCTCTTGCAACTGAAATATTCCCGGCACAAGAAGTCAGCACGTCCTG AGCTCTATGATGAGACGAGCTTTGAACTCGAAGATTAAGTTTCCTGGTCCTGAATGACACATAAAGACTTTGCGAGAAAGACCTCCCTCC TTGCCTCACAAGGAATATAAATGGATTTCTCCCCCTTCCTCAGGACAATTTTGGTTCCCAGACCAGCTTGATTGAACTGAGGGAGACGTT GTTGTTTTTAATGTCTCCAGCTTGGACTGCAGAGACAAAAACATGATTCCAGATTTAAGTCTCTCTTCTTCCAAGTATTCTACTAGAAAT ACACACACACACACACACACACTTCTGAGAATATTTTTAATGGCAATAAGCCTGTGTTTTAGCTGCTACTGTGCAGACCCTTTCAGGGAT TCCAACCAAATGCAAATGAGAGAATTTAAAATTTTTATTCAGTAAGTTCACTATGTGTTTACTTATTCCATCTGCAGATGTAAGTGAGTG TGGTGGACAGTAGCCACCTTCCTTGTTCCACTCATAAAAGCATCAGCTAGATCTCATCTGTATCATGGGAAGTTCCAGGCAGGAGGGTAA AGAAATGTTGTTTCTACCATTTGTCACATTTGGACGTTTTTCACAGACAAGTGTCAAAAGACATAGTTAATGTTTCGAGGGGGAAAGCAG AACTGATCAACTGCGACTAGAGACGTCTTTGAAGGAAATTTTCCTTTTCCTCTTGCTGGTCTCCTACAGTTTTACAGCTGAGCTTTTGAG GTTTGGAAAATTCAAGATGTTTGTTTCATAAGAAAAGGGGCAGAAAGCAAGCACAAGACACTTTTAGGTCTAGACTAAAATGGTAGTTAC AACAATTTGAACCTTGTTGGTGCAGTGCACGGTGAATGCTTACCCTGCACAGCCTCTATTACCTTAAGGAATTAGTTGTCATTTTCCTAT TGAATTTTGAGTAAATGGTGAAATTCAGTGTCCTTTAGAATCGACTCCCAAGACTATATTTGAAGAATGCATTGATTCAAGAAGGACATT TAAAAGCAAATTCTGACTTTTTCAAGACCAACACACTTGTTTAGGCCTATTAAATTGTACTATCACTTGTTACATGCCCTCTGAATTGGG AGAAAGTGGGCTTGCACACTTTGAGGTAACTAACTGTAATTTACTTGTGTTCTCTCTTTCTTGCTCTCCTTCTCAACATGAACACAAACC TCTATGGAAAAGTAGCCTCTTGTTAATCTGATCTAGTTTGTATGGAAAAAGCCCATGGAGAACCTTATCTTTAACAAGCTCCCAGAGGGT GCCCAGATTTGGAAATTCTAGAGAGCAGTGGTGACCTTTTAGCAAAGCTTCTGTAACAGTTCGAATGAGTTGCAGAACATTCCACTCCAT CAAATGACACTGTAAACAAATCACTTCAAGAGAGGCTTGGTTTTGTGTGGCACAGATGGACCCAAGCTTTCATGCTGTGCACTGAGATAG AAACTCCACCCGCAGCGCCTGCGATGGATGGAGCAGTGTGCCCTGATGCTCAAAGCGTATTAAAGGAAAAAAAGTGATCAGCATGGAAAG TTTTTATGGGGAAATTATAACTCCAAGTGGGTGCATTGGTTTAAAAATGGATCACAATGATAGAGTTCTTCATGAATGTTTACAAGTTGT AAGGAATACCGTTAGTGAAAGAGGAAAAGAAGTGGGTTCTGAAAATGCAGTTTCCCATCCAATGATTTTGATAACAAAATTCCAACTTTT CTCAATGAAACTGATGCAGTATTATTTGTGCAAATAAAATGTGTCATAAATATGCAAAGAAAGGGAGACATACTGTTCTTATCTTGAATA TGTGCATTTAAATGAATTGTCCAAAATGCATAAATGCCTTGCGTTCTATAAAGGAAACAGGAGGTCAAAAAGACAGCGAGATATCTAGTC >In-frame_ENST00000217246_ENST00000399002_TCGA-QT-A5XJ-01A_MACROD2_chr20_14474154_-_SPTLC3_chr20_13071731_length(amino acids)=468AA_start in transcript=341_stop in transcript=1747 MPVSLGNLQLKASHPHGNMYPSNKKKKVWREEKERLLKMTLEERRKEYLRDYIPLNSILSWKEEMKGKGQNDEENTQETSQVKKSLTEKV SLYRGDITLLEVDAIVNAANASLLGGGGGTLDKHKELEDLVAKFLNVEAAMVFGMGFATNSMNIPALVGKGCLILSDELNHTSLVLGARL SGATIRIFKHNNTQSLEKLLRDAVIYGQPRTRRAWKKILILVEGVYSMEGSIVHLPQIIALKKKYKAYLYIDEAHSIGAVGPTGRGVTEF FGLDPHEVDVLMGTFTKSFGASGGYIAGRKDLVDYLRVHSHSAVYASSMSPPIAEQIIRSLKLIMGLDGTTQGLQRVQQLAKNTRYFRQR LQEMGFIIYGNENASVVPLLLYMPGKVAAFARHMLEKKIGVVVVGFPATPLAEARARFCVSAAHTREMLDTVLEALDEMGDLLQLKYSRH -------------------------------------------------------------- >In-frame_ENST00000217246_ENST00000378194_TCGA-QT-A5XJ-01A_MACROD2_chr20_14474154_-_SPTLC3_chr20_13071731_length(transcript)=1610nt_BP=696nt GCGTGCGCCCTGGGGCCCAAGTTGGGGCGCGCCGTGGCTAGAACACGGAGAGCGGCGGGCAGTGCAGCCAATGGGAGGCGGCGCTGCCTA GCGGCTGGTAGGCGGTGCCTGCGCGGGTGTTAGGTTAGCGCGAGGCGTGACCTAGTTGACAGGCTCTGAGGTGCTGCTGTGGCGGCGTCC GCGGGGCTGAGGCGGGTGGGAGCCGGAGCCGAGCGCGGGCTGAGGGAGGAGGGCGGCGACTGGAGAGCGGCGAGCGGCGAGCAGCGCAGG ACGCAGAGCCTCTTTCACTTTTTCCCTGCTGAGTGCCCCCTCCCACCCCTCCCACTCCACACACACCCTGTTTGCCCGTGAGCCTGGGGA ACTTGCAGCTTAAAGCCAGCCACCCCCACGGCAACATGTACCCCAGCAACAAGAAGAAAAAGGTGTGGAGAGAGGAGAAAGAACGTTTAT TGAAGATGACCTTAGAAGAGAGACGCAAAGAATACCTAAGAGACTATATTCCCCTGAACAGCATTCTATCATGGAAGGAGGAGATGAAGG GCAAGGGCCAAAATGATGAAGAAAATACTCAGGAAACATCCCAGGTGAAGAAAAGTTTGACTGAAAAAGTTTCTCTCTATAGAGGTGACA TCACATTGCTAGAGGTAGATGCTATAGTCAATGCCGCAAATGCCAGTCTTCTTGGAGGAGGAGGTGGCACCTTGGATAAGCACAAGGAGT TGGAGGACCTTGTGGCTAAGTTCCTGAATGTGGAAGCAGCTATGGTCTTTGGGATGGGATTCGCAACTAACTCAATGAATATCCCAGCAT TAGTTGGAAAGGGATGCCTCATTTTAAGTGATGAGTTAAACCACACATCGCTTGTGCTTGGGGCCCGACTCTCAGGTGCAACCATAAGAA TCTTCAAACACAACAACACACAAAGCCTAGAGAAGCTCCTGAGAGATGCTGTCATCTATGGCCAGCCTCGAACCCGCAGAGCTTGGAAAA AGATTCTCATCCTGGTGGAGGGTGTCTACAGGACCTCGTGGATTATTTACGGGTTCACTCGCATAGTGCTGTTTATGCTTCATCCATGAG CCCACCGATAGCAGAGCAAATCATCAGATCACTAAAACTTATCATGGGACTGGATGGGACCACTCAAGGGCTGCAGAGAGTACAGCAACT TGCGAAAAACACAAGATACTTCAGACAAAGACTGCAGGAAATGGGATTCATTATCTATGGCAATGAGAATGCTTCTGTTGTTCCTCTGCT TCTTTATATGCCTGGTAAAGTAGCGGCTTTTGCAAGGCATATGCTAGAGAAAAAAATTGGAGTGGTGGTCGTGGGATTTCCAGCCACTCC CCTCGCAGAAGCTCGGGCTCGGTTTTGTGTTTCAGCGGCACATACCCGGGAGATGTTAGACACGGTGAGTACACCACAGGCCAACGGGAT CTCAGTACCAGTACCTTGGATTCAAAGCAAGTCCTTTTGTTGAGACAGCTTGGGGTTCTCTGGGTTTCTCTTGGGTTATTTAGGAAAACA >In-frame_ENST00000217246_ENST00000378194_TCGA-QT-A5XJ-01A_MACROD2_chr20_14474154_-_SPTLC3_chr20_13071731_length(amino acids)=245AA_start in transcript=341_stop in transcript=1078 MPVSLGNLQLKASHPHGNMYPSNKKKKVWREEKERLLKMTLEERRKEYLRDYIPLNSILSWKEEMKGKGQNDEENTQETSQVKKSLTEKV SLYRGDITLLEVDAIVNAANASLLGGGGGTLDKHKELEDLVAKFLNVEAAMVFGMGFATNSMNIPALVGKGCLILSDELNHTSLVLGARL -------------------------------------------------------------- >In-frame_ENST00000310348_ENST00000399002_TCGA-QT-A5XJ-01A_MACROD2_chr20_14474154_-_SPTLC3_chr20_13071731_length(transcript)=3250nt_BP=301nt ATGTACCCCAGCAACAAGAAGAAAAAGGTGTGGAGAGAGGAGAAAGAACGTTTATTGAAGATGACCTTAGAAGAGAGACGCAAAGAATAC CTAAGAGACTATATTCCCCTGAACAGCATTCTATCATGGAAGGAGGAGATGAAGGGCAAGGGCCAAAATGATGAAGAAAATACTCAGGAA ACATCCCAGGTGAAGAAAAGTTTGACTGAAAAAGTTTCTCTCTATAGAGGTGACATCACATTGCTAGAGGTAGATGCTATAGTCAATGCC GCAAATGCCAGTCTTCTTGGAGGAGGAGGTGGCACCTTGGATAAGCACAAGGAGTTGGAGGACCTTGTGGCTAAGTTCCTGAATGTGGAA GCAGCTATGGTCTTTGGGATGGGATTCGCAACTAACTCAATGAATATCCCAGCATTAGTTGGAAAGGGATGCCTCATTTTAAGTGATGAG TTAAACCACACATCGCTTGTGCTTGGGGCCCGACTCTCAGGTGCAACCATAAGAATCTTCAAACACAACAACACACAAAGCCTAGAGAAG CTCCTGAGAGATGCTGTCATCTATGGCCAGCCTCGAACCCGCAGAGCTTGGAAAAAGATTCTCATCCTGGTGGAGGGTGTCTACAGCATG GAAGGTTCCATCGTGCATCTGCCCCAGATCATAGCTCTAAAGAAGAAATACAAGGCTTACCTCTACATAGATGAAGCTCACAGTATTGGG GCCGTGGGCCCAACCGGCCGGGGTGTCACGGAGTTCTTTGGACTAGACCCTCATGAAGTTGATGTGCTCATGGGCACATTCACCAAAAGT TTTGGAGCTTCAGGAGGTTACATAGCTGGAAGGAAGGACCTCGTGGATTATTTACGGGTTCACTCGCATAGTGCTGTTTATGCTTCATCC ATGAGCCCACCGATAGCAGAGCAAATCATCAGATCACTAAAACTTATCATGGGACTGGATGGGACCACTCAAGGGCTGCAGAGAGTACAG CAACTTGCGAAAAACACAAGATACTTCAGACAAAGACTGCAGGAAATGGGATTCATTATCTATGGCAATGAGAATGCTTCTGTTGTTCCT CTGCTTCTTTATATGCCTGGTAAAGTAGCGGCTTTTGCAAGGCATATGCTAGAGAAAAAAATTGGAGTGGTGGTCGTGGGATTTCCAGCC ACTCCCCTCGCAGAAGCTCGGGCTCGGTTTTGTGTTTCAGCGGCACATACCCGGGAGATGTTAGACACGGTTTTAGAAGCTCTTGATGAA ATGGGTGATCTCTTGCAACTGAAATATTCCCGGCACAAGAAGTCAGCACGTCCTGAGCTCTATGATGAGACGAGCTTTGAACTCGAAGAT TAAGTTTCCTGGTCCTGAATGACACATAAAGACTTTGCGAGAAAGACCTCCCTCCTTGCCTCACAAGGAATATAAATGGATTTCTCCCCC TTCCTCAGGACAATTTTGGTTCCCAGACCAGCTTGATTGAACTGAGGGAGACGTTGTTGTTTTTAATGTCTCCAGCTTGGACTGCAGAGA CAAAAACATGATTCCAGATTTAAGTCTCTCTTCTTCCAAGTATTCTACTAGAAATACACACACACACACACACACACTTCTGAGAATATT TTTAATGGCAATAAGCCTGTGTTTTAGCTGCTACTGTGCAGACCCTTTCAGGGATTCCAACCAAATGCAAATGAGAGAATTTAAAATTTT TATTCAGTAAGTTCACTATGTGTTTACTTATTCCATCTGCAGATGTAAGTGAGTGTGGTGGACAGTAGCCACCTTCCTTGTTCCACTCAT AAAAGCATCAGCTAGATCTCATCTGTATCATGGGAAGTTCCAGGCAGGAGGGTAAAGAAATGTTGTTTCTACCATTTGTCACATTTGGAC GTTTTTCACAGACAAGTGTCAAAAGACATAGTTAATGTTTCGAGGGGGAAAGCAGAACTGATCAACTGCGACTAGAGACGTCTTTGAAGG AAATTTTCCTTTTCCTCTTGCTGGTCTCCTACAGTTTTACAGCTGAGCTTTTGAGGTTTGGAAAATTCAAGATGTTTGTTTCATAAGAAA AGGGGCAGAAAGCAAGCACAAGACACTTTTAGGTCTAGACTAAAATGGTAGTTACAACAATTTGAACCTTGTTGGTGCAGTGCACGGTGA ATGCTTACCCTGCACAGCCTCTATTACCTTAAGGAATTAGTTGTCATTTTCCTATTGAATTTTGAGTAAATGGTGAAATTCAGTGTCCTT TAGAATCGACTCCCAAGACTATATTTGAAGAATGCATTGATTCAAGAAGGACATTTAAAAGCAAATTCTGACTTTTTCAAGACCAACACA CTTGTTTAGGCCTATTAAATTGTACTATCACTTGTTACATGCCCTCTGAATTGGGAGAAAGTGGGCTTGCACACTTTGAGGTAACTAACT GTAATTTACTTGTGTTCTCTCTTTCTTGCTCTCCTTCTCAACATGAACACAAACCTCTATGGAAAAGTAGCCTCTTGTTAATCTGATCTA GTTTGTATGGAAAAAGCCCATGGAGAACCTTATCTTTAACAAGCTCCCAGAGGGTGCCCAGATTTGGAAATTCTAGAGAGCAGTGGTGAC CTTTTAGCAAAGCTTCTGTAACAGTTCGAATGAGTTGCAGAACATTCCACTCCATCAAATGACACTGTAAACAAATCACTTCAAGAGAGG CTTGGTTTTGTGTGGCACAGATGGACCCAAGCTTTCATGCTGTGCACTGAGATAGAAACTCCACCCGCAGCGCCTGCGATGGATGGAGCA GTGTGCCCTGATGCTCAAAGCGTATTAAAGGAAAAAAAGTGATCAGCATGGAAAGTTTTTATGGGGAAATTATAACTCCAAGTGGGTGCA TTGGTTTAAAAATGGATCACAATGATAGAGTTCTTCATGAATGTTTACAAGTTGTAAGGAATACCGTTAGTGAAAGAGGAAAAGAAGTGG GTTCTGAAAATGCAGTTTCCCATCCAATGATTTTGATAACAAAATTCCAACTTTTCTCAATGAAACTGATGCAGTATTATTTGTGCAAAT AAAATGTGTCATAAATATGCAAAGAAAGGGAGACATACTGTTCTTATCTTGAATATGTGCATTTAAATGAATTGTCCAAAATGCATAAAT GCCTTGCGTTCTATAAAGGAAACAGGAGGTCAAAAAGACAGCGAGATATCTAGTCCTTCCACAAGGTATGGAAAGCAATAAACATCTTCC >In-frame_ENST00000310348_ENST00000399002_TCGA-QT-A5XJ-01A_MACROD2_chr20_14474154_-_SPTLC3_chr20_13071731_length(amino acids)=450AA_start in transcript=0_stop in transcript=1352 MYPSNKKKKVWREEKERLLKMTLEERRKEYLRDYIPLNSILSWKEEMKGKGQNDEENTQETSQVKKSLTEKVSLYRGDITLLEVDAIVNA ANASLLGGGGGTLDKHKELEDLVAKFLNVEAAMVFGMGFATNSMNIPALVGKGCLILSDELNHTSLVLGARLSGATIRIFKHNNTQSLEK LLRDAVIYGQPRTRRAWKKILILVEGVYSMEGSIVHLPQIIALKKKYKAYLYIDEAHSIGAVGPTGRGVTEFFGLDPHEVDVLMGTFTKS FGASGGYIAGRKDLVDYLRVHSHSAVYASSMSPPIAEQIIRSLKLIMGLDGTTQGLQRVQQLAKNTRYFRQRLQEMGFIIYGNENASVVP LLLYMPGKVAAFARHMLEKKIGVVVVGFPATPLAEARARFCVSAAHTREMLDTVLEALDEMGDLLQLKYSRHKKSARPELYDETSFELED -------------------------------------------------------------- >In-frame_ENST00000310348_ENST00000378194_TCGA-QT-A5XJ-01A_MACROD2_chr20_14474154_-_SPTLC3_chr20_13071731_length(transcript)=1215nt_BP=301nt ATGTACCCCAGCAACAAGAAGAAAAAGGTGTGGAGAGAGGAGAAAGAACGTTTATTGAAGATGACCTTAGAAGAGAGACGCAAAGAATAC CTAAGAGACTATATTCCCCTGAACAGCATTCTATCATGGAAGGAGGAGATGAAGGGCAAGGGCCAAAATGATGAAGAAAATACTCAGGAA ACATCCCAGGTGAAGAAAAGTTTGACTGAAAAAGTTTCTCTCTATAGAGGTGACATCACATTGCTAGAGGTAGATGCTATAGTCAATGCC GCAAATGCCAGTCTTCTTGGAGGAGGAGGTGGCACCTTGGATAAGCACAAGGAGTTGGAGGACCTTGTGGCTAAGTTCCTGAATGTGGAA GCAGCTATGGTCTTTGGGATGGGATTCGCAACTAACTCAATGAATATCCCAGCATTAGTTGGAAAGGGATGCCTCATTTTAAGTGATGAG TTAAACCACACATCGCTTGTGCTTGGGGCCCGACTCTCAGGTGCAACCATAAGAATCTTCAAACACAACAACACACAAAGCCTAGAGAAG CTCCTGAGAGATGCTGTCATCTATGGCCAGCCTCGAACCCGCAGAGCTTGGAAAAAGATTCTCATCCTGGTGGAGGGTGTCTACAGGACC TCGTGGATTATTTACGGGTTCACTCGCATAGTGCTGTTTATGCTTCATCCATGAGCCCACCGATAGCAGAGCAAATCATCAGATCACTAA AACTTATCATGGGACTGGATGGGACCACTCAAGGGCTGCAGAGAGTACAGCAACTTGCGAAAAACACAAGATACTTCAGACAAAGACTGC AGGAAATGGGATTCATTATCTATGGCAATGAGAATGCTTCTGTTGTTCCTCTGCTTCTTTATATGCCTGGTAAAGTAGCGGCTTTTGCAA GGCATATGCTAGAGAAAAAAATTGGAGTGGTGGTCGTGGGATTTCCAGCCACTCCCCTCGCAGAAGCTCGGGCTCGGTTTTGTGTTTCAG CGGCACATACCCGGGAGATGTTAGACACGGTGAGTACACCACAGGCCAACGGGATCTCAGTACCAGTACCTTGGATTCAAAGCAAGTCCT TTTGTTGAGACAGCTTGGGGTTCTCTGGGTTTCTCTTGGGTTATTTAGGAAAACAACACTGACAAAAGTCACTGCCAAAAAACAAGAGCT >In-frame_ENST00000310348_ENST00000378194_TCGA-QT-A5XJ-01A_MACROD2_chr20_14474154_-_SPTLC3_chr20_13071731_length(amino acids)=227AA_start in transcript=0_stop in transcript=683 MYPSNKKKKVWREEKERLLKMTLEERRKEYLRDYIPLNSILSWKEEMKGKGQNDEENTQETSQVKKSLTEKVSLYRGDITLLEVDAIVNA ANASLLGGGGGTLDKHKELEDLVAKFLNVEAAMVFGMGFATNSMNIPALVGKGCLILSDELNHTSLVLGARLSGATIRIFKHNNTQSLEK -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for MACROD2-SPTLC3 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for MACROD2-SPTLC3 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for MACROD2-SPTLC3 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | MACROD2 | C0004352 | Autistic Disorder | 1 | CTD_human |
Hgene | MACROD2 | C0013146 | Drug abuse | 1 | CTD_human |
Hgene | MACROD2 | C0013170 | Drug habituation | 1 | CTD_human |
Hgene | MACROD2 | C0013222 | Drug Use Disorders | 1 | CTD_human |
Hgene | MACROD2 | C0023903 | Liver neoplasms | 1 | CTD_human |
Hgene | MACROD2 | C0029231 | Organic Mental Disorders, Substance-Induced | 1 | CTD_human |
Hgene | MACROD2 | C0038580 | Substance Dependence | 1 | CTD_human |
Hgene | MACROD2 | C0038586 | Substance Use Disorders | 1 | CTD_human |
Hgene | MACROD2 | C0236969 | Substance-Related Disorders | 1 | CTD_human |
Hgene | MACROD2 | C0345904 | Malignant neoplasm of liver | 1 | CTD_human |
Hgene | MACROD2 | C0740858 | Substance abuse problem | 1 | CTD_human |
Hgene | MACROD2 | C1510472 | Drug Dependence | 1 | CTD_human |
Hgene | MACROD2 | C4316881 | Prescription Drug Abuse | 1 | CTD_human |