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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:MLF1IP-VPS13A (FusionGDB2 ID:53836)

Fusion Gene Summary for MLF1IP-VPS13A

check button Fusion gene summary
Fusion gene informationFusion gene name: MLF1IP-VPS13A
Fusion gene ID: 53836
HgeneTgene
Gene symbol

MLF1IP

VPS13A

Gene ID

79682

23230

Gene namecentromere protein Uvacuolar protein sorting 13 homolog A
SynonymsCENP50|CENPU50|KLIP1|MLF1IP|PBIP1CHAC|CHOREIN
Cytomap

4q35.1

9q21.2

Type of geneprotein-codingprotein-coding
Descriptioncentromere protein UKSHV latent nuclear antigen interacting protein 1MLF1 interacting proteincentromere protein of 50 kDainterphase centromere complex protein 24polo-box-interacting protein 1vacuolar protein sorting-associated protein 13Achorea-acanthocytosis proteinvacuolar protein sorting 13A
Modification date2020031320200313
UniProtAcc..
Ensembl transtripts involved in fusion geneENST00000281453, ENST00000506535, 
ENST00000541971, 		ENST00000376634, 
ENST00000376636, ENST00000360280, 
ENST00000357409, ENST00000423463, 
ENST00000484581, ENST00000376646, 
Fusion gene scores* DoF score2 X 2 X 2=87 X 6 X 4=168
# samples 27
** MAII scorelog2(2/8*10)=1.32192809488736log2(7/168*10)=-1.26303440583379
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: MLF1IP [Title/Abstract] AND VPS13A [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointMLF1IP(185637551)-VPS13A(79910458), # samples:1
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check buttonFusion gene breakpoints across MLF1IP (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonFusion gene breakpoints across VPS13A (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4Non-CancerTCGA-IN-8462-11AMLF1IPchr4

185637551

-VPS13Achr9

79910458

+


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Fusion Gene ORF analysis for MLF1IP-VPS13A

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000281453ENST00000376634MLF1IPchr4

185637551

-VPS13Achr9

79910458

+
In-frameENST00000281453ENST00000376636MLF1IPchr4

185637551

-VPS13Achr9

79910458

+
In-frameENST00000281453ENST00000360280MLF1IPchr4

185637551

-VPS13Achr9

79910458

+
In-frameENST00000281453ENST00000357409MLF1IPchr4

185637551

-VPS13Achr9

79910458

+
5CDS-3UTRENST00000281453ENST00000423463MLF1IPchr4

185637551

-VPS13Achr9

79910458

+
5CDS-intronENST00000281453ENST00000484581MLF1IPchr4

185637551

-VPS13Achr9

79910458

+
5CDS-intronENST00000281453ENST00000376646MLF1IPchr4

185637551

-VPS13Achr9

79910458

+
intron-3CDSENST00000506535ENST00000376634MLF1IPchr4

185637551

-VPS13Achr9

79910458

+
intron-3CDSENST00000506535ENST00000376636MLF1IPchr4

185637551

-VPS13Achr9

79910458

+
intron-3CDSENST00000506535ENST00000360280MLF1IPchr4

185637551

-VPS13Achr9

79910458

+
intron-3CDSENST00000506535ENST00000357409MLF1IPchr4

185637551

-VPS13Achr9

79910458

+
intron-3UTRENST00000506535ENST00000423463MLF1IPchr4

185637551

-VPS13Achr9

79910458

+
intron-intronENST00000506535ENST00000484581MLF1IPchr4

185637551

-VPS13Achr9

79910458

+
intron-intronENST00000506535ENST00000376646MLF1IPchr4

185637551

-VPS13Achr9

79910458

+
In-frameENST00000541971ENST00000376634MLF1IPchr4

185637551

-VPS13Achr9

79910458

+
In-frameENST00000541971ENST00000376636MLF1IPchr4

185637551

-VPS13Achr9

79910458

+
In-frameENST00000541971ENST00000360280MLF1IPchr4

185637551

-VPS13Achr9

79910458

+
In-frameENST00000541971ENST00000357409MLF1IPchr4

185637551

-VPS13Achr9

79910458

+
5CDS-3UTRENST00000541971ENST00000423463MLF1IPchr4

185637551

-VPS13Achr9

79910458

+
5CDS-intronENST00000541971ENST00000484581MLF1IPchr4

185637551

-VPS13Achr9

79910458

+
5CDS-intronENST00000541971ENST00000376646MLF1IPchr4

185637551

-VPS13Achr9

79910458

+

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000281453MLF1IPchr4185637551-ENST00000376634VPS13Achr979910458+7099689863912127
ENST00000281453MLF1IPchr4185637551-ENST00000376636VPS13Achr979910458+8184689867062232
ENST00000281453MLF1IPchr4185637551-ENST00000360280VPS13Achr979910458+12242689867062232
ENST00000281453MLF1IPchr4185637551-ENST00000357409VPS13Achr979910458+6978689864692153
ENST00000541971MLF1IPchr4185637551-ENST00000376634VPS13Achr979910458+7028618063202106
ENST00000541971MLF1IPchr4185637551-ENST00000376636VPS13Achr979910458+8113618066352211
ENST00000541971MLF1IPchr4185637551-ENST00000360280VPS13Achr979910458+12171618066352211
ENST00000541971MLF1IPchr4185637551-ENST00000357409VPS13Achr979910458+6907618063982132

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000281453ENST00000376634MLF1IPchr4185637551-VPS13Achr979910458+0.0001553470.9998447
ENST00000281453ENST00000376636MLF1IPchr4185637551-VPS13Achr979910458+8.09E-050.99991906
ENST00000281453ENST00000360280MLF1IPchr4185637551-VPS13Achr979910458+5.55E-050.99994445
ENST00000281453ENST00000357409MLF1IPchr4185637551-VPS13Achr979910458+0.0001122480.9998877
ENST00000541971ENST00000376634MLF1IPchr4185637551-VPS13Achr979910458+0.0001447970.99985516
ENST00000541971ENST00000376636MLF1IPchr4185637551-VPS13Achr979910458+7.57E-050.9999243
ENST00000541971ENST00000360280MLF1IPchr4185637551-VPS13Achr979910458+5.13E-050.99994874
ENST00000541971ENST00000357409MLF1IPchr4185637551-VPS13Achr979910458+0.0001049720.999895

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Fusion Genomic Features for MLF1IP-VPS13A


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for MLF1IP-VPS13A


check button Go to

FGviewer for the breakpoints of chr4:185637551-chr9:79910458

.
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
..
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneVPS13Achr4:185637551chr9:79910458ENST0000035740931692615_31741169.03096.0RegionRequired for mitochondrial localization
TgeneVPS13Achr4:185637551chr9:79910458ENST0000036028031722615_31741169.03175.0RegionRequired for mitochondrial localization
TgeneVPS13Achr4:185637551chr9:79910458ENST0000037663431692615_31741169.03070.0RegionRequired for mitochondrial localization
TgeneVPS13Achr4:185637551chr9:79910458ENST0000037663630712615_31741130.03136.0RegionRequired for mitochondrial localization
TgeneVPS13Achr4:185637551chr9:79910458ENST0000035740931691256_12891169.03096.0RepeatNote=TPR 4
TgeneVPS13Achr4:185637551chr9:79910458ENST0000035740931691291_13201169.03096.0RepeatNote=TPR 5
TgeneVPS13Achr4:185637551chr9:79910458ENST0000035740931692009_20411169.03096.0RepeatNote=TPR 6
TgeneVPS13Achr4:185637551chr9:79910458ENST0000035740931692568_26011169.03096.0RepeatNote=TPR 7
TgeneVPS13Achr4:185637551chr9:79910458ENST0000035740931692717_27511169.03096.0RepeatNote=TPR 8
TgeneVPS13Achr4:185637551chr9:79910458ENST0000035740931692860_28981169.03096.0RepeatNote=TPR 9
TgeneVPS13Achr4:185637551chr9:79910458ENST0000035740931693086_31191169.03096.0RepeatNote=TPR 10
TgeneVPS13Achr4:185637551chr9:79910458ENST0000036028031721256_12891169.03175.0RepeatNote=TPR 4
TgeneVPS13Achr4:185637551chr9:79910458ENST0000036028031721291_13201169.03175.0RepeatNote=TPR 5
TgeneVPS13Achr4:185637551chr9:79910458ENST0000036028031722009_20411169.03175.0RepeatNote=TPR 6
TgeneVPS13Achr4:185637551chr9:79910458ENST0000036028031722568_26011169.03175.0RepeatNote=TPR 7
TgeneVPS13Achr4:185637551chr9:79910458ENST0000036028031722717_27511169.03175.0RepeatNote=TPR 8
TgeneVPS13Achr4:185637551chr9:79910458ENST0000036028031722860_28981169.03175.0RepeatNote=TPR 9
TgeneVPS13Achr4:185637551chr9:79910458ENST0000036028031723086_31191169.03175.0RepeatNote=TPR 10
TgeneVPS13Achr4:185637551chr9:79910458ENST0000037663431691256_12891169.03070.0RepeatNote=TPR 4
TgeneVPS13Achr4:185637551chr9:79910458ENST0000037663431691291_13201169.03070.0RepeatNote=TPR 5
TgeneVPS13Achr4:185637551chr9:79910458ENST0000037663431692009_20411169.03070.0RepeatNote=TPR 6
TgeneVPS13Achr4:185637551chr9:79910458ENST0000037663431692568_26011169.03070.0RepeatNote=TPR 7
TgeneVPS13Achr4:185637551chr9:79910458ENST0000037663431692717_27511169.03070.0RepeatNote=TPR 8
TgeneVPS13Achr4:185637551chr9:79910458ENST0000037663431692860_28981169.03070.0RepeatNote=TPR 9
TgeneVPS13Achr4:185637551chr9:79910458ENST0000037663431693086_31191169.03070.0RepeatNote=TPR 10
TgeneVPS13Achr4:185637551chr9:79910458ENST0000037663630711256_12891130.03136.0RepeatNote=TPR 4
TgeneVPS13Achr4:185637551chr9:79910458ENST0000037663630711291_13201130.03136.0RepeatNote=TPR 5
TgeneVPS13Achr4:185637551chr9:79910458ENST0000037663630712009_20411130.03136.0RepeatNote=TPR 6
TgeneVPS13Achr4:185637551chr9:79910458ENST0000037663630712568_26011130.03136.0RepeatNote=TPR 7
TgeneVPS13Achr4:185637551chr9:79910458ENST0000037663630712717_27511130.03136.0RepeatNote=TPR 8
TgeneVPS13Achr4:185637551chr9:79910458ENST0000037663630712860_28981130.03136.0RepeatNote=TPR 9
TgeneVPS13Achr4:185637551chr9:79910458ENST0000037663630713086_31191130.03136.0RepeatNote=TPR 10

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneVPS13Achr4:185637551chr9:79910458ENST000003574093169842_8481169.03096.0MotifFFAT
TgeneVPS13Achr4:185637551chr9:79910458ENST000003602803172842_8481169.03175.0MotifFFAT
TgeneVPS13Achr4:185637551chr9:79910458ENST000003766343169842_8481169.03070.0MotifFFAT
TgeneVPS13Achr4:185637551chr9:79910458ENST000003766363071842_8481130.03136.0MotifFFAT
TgeneVPS13Achr4:185637551chr9:79910458ENST000003574093169212_2451169.03096.0RepeatNote=TPR 1
TgeneVPS13Achr4:185637551chr9:79910458ENST000003574093169373_4061169.03096.0RepeatNote=TPR 2
TgeneVPS13Achr4:185637551chr9:79910458ENST000003574093169537_5751169.03096.0RepeatNote=TPR 3
TgeneVPS13Achr4:185637551chr9:79910458ENST000003602803172212_2451169.03175.0RepeatNote=TPR 1
TgeneVPS13Achr4:185637551chr9:79910458ENST000003602803172373_4061169.03175.0RepeatNote=TPR 2
TgeneVPS13Achr4:185637551chr9:79910458ENST000003602803172537_5751169.03175.0RepeatNote=TPR 3
TgeneVPS13Achr4:185637551chr9:79910458ENST000003766343169212_2451169.03070.0RepeatNote=TPR 1
TgeneVPS13Achr4:185637551chr9:79910458ENST000003766343169373_4061169.03070.0RepeatNote=TPR 2
TgeneVPS13Achr4:185637551chr9:79910458ENST000003766343169537_5751169.03070.0RepeatNote=TPR 3
TgeneVPS13Achr4:185637551chr9:79910458ENST000003766363071212_2451130.03136.0RepeatNote=TPR 1
TgeneVPS13Achr4:185637551chr9:79910458ENST000003766363071373_4061130.03136.0RepeatNote=TPR 2
TgeneVPS13Achr4:185637551chr9:79910458ENST000003766363071537_5751130.03136.0RepeatNote=TPR 3


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Fusion Gene Sequence for MLF1IP-VPS13A


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>In-frame_ENST00000281453_ENST00000376634_TCGA-IN-8462-11A_MLF1IP_chr4_185637551_-_VPS13A_chr9_79910458_length(transcript)=7099nt_BP=689nt
CGGATTGGCTGTTCGGAGCGGCGAGGGGCTTGGCGGGAGCTTCCAGTCGCTCGAGAGCGGAGAGCGGCACCATGGCCCCGCGGGGGCGGC
GGCGGCCGCGGCCTCACAGGTCTGAGGGCGCAAGACGTTCAAAGAACACTTTAGAAAGAACACATTCCATGAAAGATAAAGCTGGTCAAA
AGTGCAAGCCTATTGACGTGTTCGACTTTCCTGATAATTCTGATGTCTCAAGCATTGGCAGGCTGGGTGAAAATGAGAAAGATGAAGAAA
CTTATGAGACCTTTGATCCTCCTTTACATAGCACAGCTATATATGCTGATGAAGAAGAATTCTCCAAACATTGTGGACTGTCTCTCTCTT
CAACTCCTCCAGGAAAAGAAGCAAAAAGAAGTTCAGACACTTCTGGAAATGAAGCAAGTGAAATCGAATCTGTAAAAATTAGTGCAAAAA
AGCCAGGAAGAAAGCTCAGGCCCATTAGTGATGACTCTGAAAGCATTGAAGAAAGTGATACAAGGAGAAAAGTTAAATCAGCAGAGAAAA
TAAGTACACAACGTCATGAGGTTATTCGAACCACAGCGTCTTCAGAACTTTCAGAGAAACCAGCTGAGTCTGTCACTTCTAAAAAGACAG
GACCCCTTAGTGCCCAGCCCTCTGTTGAAAAAGAGAACTTGGCAATAGAAAGTCAATCGGCTTTTATAGATAATTTTCAGGCAGCTAAAC
AAGCCTTGGCTGAGGCAACTGTTCAGGCAGCTGGAATGGCTGCTACTGGTGTAAAAGAACTCGCACAAAGGAGTTCCAGAATGGCACTGG
ATATTAACATCAAAGCCCCAGTTGTGGTCATCCCGCAGTCTCCAGTTTCTGAAAATGTTTTTGTTGCTGATTTTGGACTAATTACAATGA
CAAATACCTTTCATATGATAACAGAGAGCCAGAGCTCTCCCCCACCTGTTATTGATTTGATAACAATAAAGCTGAGTGAAATGCGACTAT
ACAGATCTCGATTTATTAATGATGCATACCAGGAAGTACTGGATCTACTCCTGCCATTAAATCTTGAGGTTGTGGTTGAACGAAATTTAT
GCTGGGAGTGGTACCAGGAAGTTCCTTGTTTTAATGTAAATGCTCAGCTGAAACCAATGGAGTTCATTCTTAGTCAAGAAGATATAACAA
CTATTTTTAAAACATTGCATGGCAATATATGGTATGAAAAAGATGGTAGTGCCTCACCTGCTGTAACAAAAGACCAATACAGTGCCACTA
GTGGAGTTACTACTAATGCTTCACACCATTCAGGAGGAGCAACTGTGGTGACAGCTGCTGTGGTAGAAGTACATTCACGTGCCTTACTAG
TTAAGACAACACTAAACATAAGCTTCAAAACTGATGATCTCACCATGGTGCTGTATAGTCCAGGTCCTAAACAGGCTTCCTTTACAGATG
TTCGTGATCCTTCTCTGAAACTTGCTGAATTTAAATTGGAGAATATTATAAGTACTTTAAAAATGTATACAGATGGCTCAACATTTTCTT
CCTTCTCATTAAAAAACTGTATTTTAGATGATAAAAGACCTCATGTCAAGAAAGCAACTCCTCGAATGATAGGACTGACAGTTGGTTTTG
ACAAAAAAGACATGATGGATATAAAGTACAGGAAAGTCAGAGATGGTTGTGTGACTGATGCGGTCTTTCAAGAAATGTATATTTGTGCAA
GCGTAGAATTTCTGCAGACTGTTGCAAATGTCTTTCTTGAGGCCTACACCACAGGCACTGCTGTAGAAACCAGTGTGCAAACATGGACTG
CTAAGGAAGAAGTACCTACACAGGAATCAGTGAAGTGGGAAATTAATGTTATTATTAAAAATCCTGAAATTGTGTTTGTAGCTGACATGA
CAAAAAATGATGCTCCTGCTTTAGTCATTACAACACAATGTGAAATTTGCTATAAAGGTAACCTTGAAAATAGTACAATGACTGCTGCCA
TTAAAGATCTCCAAGTGAGAGCCTGCCCGTTTCTTCCAGTCAAGAGAAAAGGCAAAATCACTACTGTTTTGCAGCCCTGTGACTTGTTTT
ATCAAACTACTCAGAAAGGTACAGATCCACAAGTGATCGATATGTCAGTAAAATCCCTGACACTAAAGGTTTCACCAGTTATTATAAATA
CTATGATTACCATAACTTCAGCACTGTATACAACTAAGGAAACCATCCCAGAAGAAACGGCTTCTTCTACTGCACATTTATGGGAAAAGA
AGGATACAAAGACTTTAAAAATGTGGTTTCTTGAAGAATCAAATGAAACTGAAAAAATAGCTCCCACAACTGAATTGGTACCCAAAGGCG
AGATGATAAAAATGAACATTGATTCTATTTTTATAGTTCTTGAGGCTGGAATTGGTCATAGAACAGTACCTATGCTTCTGGCAAAGTCAC
GTTTTTCAGGGGAAGGCAAAAACTGGAGTTCCCTAATAAATCTGCACTGTCAGCTTGAGCTAGAAGTGCATTATTATAATGAAATGTTTG
GTGTATGGGAGCCTTTGCTTGAACCCTTAGAAATTGATCAGACTGAGGATTTTAGACCATGGAATCTTGGTATCAAGATGAAAAAGAAAG
CAAAAATGGCCATTGTTGAGTCAGATCCTGAAGAAGAAAACTACAAAGTGCCAGAATATAAAACTGTCATCAGTTTCCATTCAAAAGACC
AATTAAACATTACATTATCCAAATGTGGTCTTGTAATGTTAAACAATTTAGTCAAGGCATTTACAGAAGCTGCCACTGGATCTTCAGCTG
ACTTCGTAAAGGATCTAGCACCATTTATGATTTTAAATTCCCTTGGACTTACTATTTCTGTTTCGCCAAGTGATTCTTTTAGTGTACTCA
ACATTCCTATGGCAAAATCATATGTATTGAAAAATGGAGAAAGTTTAAGTATGGATTATATCCGAACCAAGGACAATGATCATTTCAATG
CAATGACCAGCCTAAGCAGCAAACTCTTCTTCATTCTTCTTACACCTGTTAACCATTCTACTGCTGATAAGATTCCTTTAACAAAAGTGG
GACGACGTCTGTACACTGTAAGACACAGAGAGTCTGGCGTTGAAAGATCTATTGTTTGTCAAATTGATACAGTAGAAGGAAGTAAGAAGG
TCACAATTCGCTCCCCAGTGCAGATAAGAAATCATTTTTCAGTCCCACTGTCTGTTTACGAAGGGGATACCTTATTGGGAACTGCCTCAC
CTGAAAATGAATTCAACATACCATTAGGATCTTACCGATCATTCATTTTTCTGAAGCCAGAAGATGAGAACTATCAAATGTGTGAAGGAA
TTGACTTTGAAGAGATTATAAAAAATGATGGTGCTCTTCTAAAGAAGAAATGTAGATCTAAAAACCCTTCTAAGGAATCATTTCTCATTA
ATATTGTTCCAGAAAAAGATAATTTAACATCTCTATCAGTGTATTCAGAAGATGGTTGGGATTTACCATACATAATGCATTTGTGGCCAC
CTATCCTGCTCCGAAATCTTCTTCCTTACAAAATTGCTTATTATATAGAGGGAATTGAAAATTCGGTTTTTACTCTAAGTGAAGGACATT
CAGCCCAGATTTGTACTGCACAGTTGGGTAAAGCCAGGCTACATTTAAAATTACTTGACTATCTCAATCACGATTGGAAAAGTGAATATC
ACATAAAGCCTAATCAGCAAGACATTAGTTTTGTCAGTTTTACTTGTGTTACAGAAATGGAAAAGACTGATTTAGATATTGCTGTCCATA
TGACTTACAATACTGGTCAGACAGTTGTGGCATTTCATAGTCCTTATTGGATGGTCAATAAAACTGGCCGCATGTTACAGTACAAAGCAG
ACGGAATTCATCGAAAGCATCCACCTAATTATAAAAAGCCAGTTCTCTTTTCTTTTCAGCCAAATCACTTTTTTAATAACAATAAGGTTC
AACTTATGGTAACTGATAGTGAGTTGTCCAATCAGTTTTCAATTGATACTGTTGGTAGTCATGGAGCTGTTAAATGTAAAGGCCTGAAAA
TGGACTATCAAGTTGGTGTCACTATAGACCTGAGCAGTTTTAACATTACTAGAATTGTGACATTTACCCCTTTTTATATGATTAAAAACA
AAAGCAAATACCATATATCAGTGGCTGAAGAAGGAAATGATAAATGGCTCTCTCTTGATTTGGAGCAGTGTATCCCCTTTTGGCCTGAGT
ATGCTTCTAGTAAACTTCTTATTCAAGTCGAAAGGAGTGAAGATCCTCCCAAAAGGATATATTTTAACAAGCAGGAAAATTGTATTCTAT
TGCGTCTAGATAACGAGCTTGGAGGTATTATAGCAGAAGTGAATTTGGCCGAGCATTCTACAGTTATTACATTTTTAGATTATCATGATG
GAGCAGCTACATTCCTCTTAATAAATCACACAAAGAATGAACTTGTTCAATACAATCAAAGTTCTCTCAGTGAAATAGAAGATTCCCTCC
CTCCTGGTAAAGCCGTGTTTTATACATGGGCTGATCCGGTGGGCTCTAGAAGGCTGAAGTGGAGATGTAGAAAAAGCCATGGTGAAGTAA
CACAGAAGGATGATATGATGATGCCTATAGATTTGGGGGAAAAGACAATATATTTAGTTTCATTCTTTGAAGGTTTACAACGCATTATTT
TATTCACTGAAGATCCAAGGGTATTTAAAGTAACATATGAAAGTGAGAAAGCAGAGTTAGCAGAGCAAGAAATTGCAGTGGCATTACAAG
ATGTTGGAATTTCTCTTGTCAACAATTACACGAAGCAAGAAGTAGCCTATATAGGCATTACAAGTTCTGATGTGGTTTGGGAAACAAAGC
CCAAGAAGAAGGCAAGATGGAAGCCAATGAGTGTAAAGCACACTGAGAAGTTAGAGAGAGAATTTAAGGAATATACTGAATCTTCTCCTT
CAGAAGATAAGGTTATTCAGTTGGACACTAATGTTCCGGTTCGCCTAACCCCTACTGGTCATAACATGAAAATTCTGCAGCCGCATGTAA
TAGCTCTACGAAGAAATTATCTTCCAGCATTAAAAGTGGAATATAACACATCTGCACATCAATCATCATTTAGAATTCAGATTTACAGAA
TACAGATCCAAAATCAGATACATGGTGCTGTATTTCCCTTTGTGTTTTATCCTGTTAAACCTCCAAAGTCGGTCACCATGGATTCAGCAC
CAAAGCCCTTTACAGATGTCAGTATTGTCATGAGATCTGCAGGACATTCCCAGATATCACGTATTAAGTATTTCAAAGTATTGATTCAAG
AAATGGATCTCAGGTTAGATCTTGGGTTTATCTATGCTTTAACAGACCTTATGACAGAAGCTGAGGTGACTGAAAATACAGAGGTTGAGC
TTTTTCATAAAGATATAGAAGCTTTCAAAGAAGAATATAAAACAGCCTCATTAGTAGATCAATCACAAGTCAGCCTCTATGAATATTTTC
ATATATCTCCTATCAAGTTACATTTAAGTGTTTCACTGAGTTCCGGCAGAGAAGAAGCTAAAGATTCAAAACAAAATGGAGGACTGATTC
CAGTTCATTCTTTAAATCTTTTGCTGAAGAGTATTGGTGCCACACTGACAGATGTACAAGATGTAGTTTTTAAGCTTGCATTTTTTGAAC
TCAACTATCAGTTCCATACAACATCCGATCTACAGTCTGAAGTCATAAGACACTATTCAAAACAGGCCATTAAGCAGATGTATGTACTCA
TTCTTGGACTTGATGTTTTGGGAAATCCATTTGGCTTAATTAGAGAATTTTCTGAAGGTGTAGAAGCATTTTTTTATGAACCTTACCAGG
GAGCCATCCAGGGTCCTGAAGAGTTTGTGGAAGGAATGGCACTAGGACTTAAGGCACTAGTTGGTGGAGCTGTTGGTGGATTGGCTGGTG
CTGCCTCCAAAATCACCGGTGCTATGGCTAAGGGGGTAGCAGCTATGACCATGGATGAAGACTACCAACAGAAGAGAAGAGAAGCCATGA
ATAAGCAACCAGCTGGTTTTAGAGAAGGCATCACTCGTGGAGGAAAAGGCTTAGTTTCTGGATTTGTTAGTGGCATAACAGGAATTGTTA
CAAAACCAATCAAAGGAGCTCAAAAAGGAGGAGCAGCTGGTTTCTTTAAAGGTGTTGGGAAAGGTTTAGTAGGAGCGGTAGCAAGGCCAA
CTGGAGGCATCATAGACATGGCTAGCAGTACATTTCAGGGAATAAAAAGAGCTACAGAGACTTCTGAAGTGGAGAGTCTGCGACCTCCTC
GGTTCTTCAATGAAGATGGAGTTATCAGACCGTACAGGTTGAGGGATGGGACTGGAAATCAAATGTTACAGGCATCAAAAAGTTTGATAT
GAAAAGTTAATGCATGACTTTGCAAGTGAAAGCCAACAGTAGATTTTAGTCTTAAAATTTACAAACTACGTACAGCTGTTTCAGTATTTT
GAATACAAAGAAAACCTTTTGTATTGGTAACTTTTAATAGGAATTTTAATGAATCTGGTTTTTTTATAGGGTGTTCTTAGTTCTGCACTG
GATTTGCTAGATTTGTTGGAAGCCTTTGTACCTTATGTATCCTCGTCATTGGTGGTACTTACTTAACCAATTAAACCATTTCTGTTGTGG
GGTTATTAAACCACTGGTAGCTTTTATACCAGATATATAATCCTTATATCCAATTACACATGAAGAAGGAAAAGCAAAACTCAGGAACAC
TGCTATTGTGAATTACTCTTGGATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTCCTGCTTTATTCTAGTGTAG
TCTTTATAAAACTTGTGGGATTTGATAAGCAGTTCACATGCAAACCAGTATCTTTTAATAATACAAAGTAGCATCTGGAACAATAGACAG
TTTGAAGTTAGAATCTGCTTAGACAACTTTCTTACTTGGTAAATTCGACTTTTTAAAACCTGGATTATGCTGTAGGTAACTAGTAATCAT

>In-frame_ENST00000281453_ENST00000376634_TCGA-IN-8462-11A_MLF1IP_chr4_185637551_-_VPS13A_chr9_79910458_length(amino acids)=2127AA_start in transcript=8_stop in transcript=6391
MFGAARGLAGASSRSRAESGTMAPRGRRRPRPHRSEGARRSKNTLERTHSMKDKAGQKCKPIDVFDFPDNSDVSSIGRLGENEKDEETYE
TFDPPLHSTAIYADEEEFSKHCGLSLSSTPPGKEAKRSSDTSGNEASEIESVKISAKKPGRKLRPISDDSESIEESDTRRKVKSAEKIST
QRHEVIRTTASSELSEKPAESVTSKKTGPLSAQPSVEKENLAIESQSAFIDNFQAAKQALAEATVQAAGMAATGVKELAQRSSRMALDIN
IKAPVVVIPQSPVSENVFVADFGLITMTNTFHMITESQSSPPPVIDLITIKLSEMRLYRSRFINDAYQEVLDLLLPLNLEVVVERNLCWE
WYQEVPCFNVNAQLKPMEFILSQEDITTIFKTLHGNIWYEKDGSASPAVTKDQYSATSGVTTNASHHSGGATVVTAAVVEVHSRALLVKT
TLNISFKTDDLTMVLYSPGPKQASFTDVRDPSLKLAEFKLENIISTLKMYTDGSTFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKK
DMMDIKYRKVRDGCVTDAVFQEMYICASVEFLQTVANVFLEAYTTGTAVETSVQTWTAKEEVPTQESVKWEINVIIKNPEIVFVADMTKN
DAPALVITTQCEICYKGNLENSTMTAAIKDLQVRACPFLPVKRKGKITTVLQPCDLFYQTTQKGTDPQVIDMSVKSLTLKVSPVIINTMI
TITSALYTTKETIPEETASSTAHLWEKKDTKTLKMWFLEESNETEKIAPTTELVPKGEMIKMNIDSIFIVLEAGIGHRTVPMLLAKSRFS
GEGKNWSSLINLHCQLELEVHYYNEMFGVWEPLLEPLEIDQTEDFRPWNLGIKMKKKAKMAIVESDPEEENYKVPEYKTVISFHSKDQLN
ITLSKCGLVMLNNLVKAFTEAATGSSADFVKDLAPFMILNSLGLTISVSPSDSFSVLNIPMAKSYVLKNGESLSMDYIRTKDNDHFNAMT
SLSSKLFFILLTPVNHSTADKIPLTKVGRRLYTVRHRESGVERSIVCQIDTVEGSKKVTIRSPVQIRNHFSVPLSVYEGDTLLGTASPEN
EFNIPLGSYRSFIFLKPEDENYQMCEGIDFEEIIKNDGALLKKKCRSKNPSKESFLINIVPEKDNLTSLSVYSEDGWDLPYIMHLWPPIL
LRNLLPYKIAYYIEGIENSVFTLSEGHSAQICTAQLGKARLHLKLLDYLNHDWKSEYHIKPNQQDISFVSFTCVTEMEKTDLDIAVHMTY
NTGQTVVAFHSPYWMVNKTGRMLQYKADGIHRKHPPNYKKPVLFSFQPNHFFNNNKVQLMVTDSELSNQFSIDTVGSHGAVKCKGLKMDY
QVGVTIDLSSFNITRIVTFTPFYMIKNKSKYHISVAEEGNDKWLSLDLEQCIPFWPEYASSKLLIQVERSEDPPKRIYFNKQENCILLRL
DNELGGIIAEVNLAEHSTVITFLDYHDGAATFLLINHTKNELVQYNQSSLSEIEDSLPPGKAVFYTWADPVGSRRLKWRCRKSHGEVTQK
DDMMMPIDLGEKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAEQEIAVALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKK
KARWKPMSVKHTEKLEREFKEYTESSPSEDKVIQLDTNVPVRLTPTGHNMKILQPHVIALRRNYLPALKVEYNTSAHQSSFRIQIYRIQI
QNQIHGAVFPFVFYPVKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLRLDLGFIYALTDLMTEAEVTENTEVELFH
KDIEAFKEEYKTASLVDQSQVSLYEYFHISPIKLHLSVSLSSGREEAKDSKQNGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNY
QFHTTSDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAAS
KITGAMAKGVAAMTMDEDYQQKRREAMNKQPAGFREGITRGGKGLVSGFVSGITGIVTKPIKGAQKGGAAGFFKGVGKGLVGAVARPTGG

--------------------------------------------------------------
>In-frame_ENST00000281453_ENST00000376636_TCGA-IN-8462-11A_MLF1IP_chr4_185637551_-_VPS13A_chr9_79910458_length(transcript)=8184nt_BP=689nt
CGGATTGGCTGTTCGGAGCGGCGAGGGGCTTGGCGGGAGCTTCCAGTCGCTCGAGAGCGGAGAGCGGCACCATGGCCCCGCGGGGGCGGC
GGCGGCCGCGGCCTCACAGGTCTGAGGGCGCAAGACGTTCAAAGAACACTTTAGAAAGAACACATTCCATGAAAGATAAAGCTGGTCAAA
AGTGCAAGCCTATTGACGTGTTCGACTTTCCTGATAATTCTGATGTCTCAAGCATTGGCAGGCTGGGTGAAAATGAGAAAGATGAAGAAA
CTTATGAGACCTTTGATCCTCCTTTACATAGCACAGCTATATATGCTGATGAAGAAGAATTCTCCAAACATTGTGGACTGTCTCTCTCTT
CAACTCCTCCAGGAAAAGAAGCAAAAAGAAGTTCAGACACTTCTGGAAATGAAGCAAGTGAAATCGAATCTGTAAAAATTAGTGCAAAAA
AGCCAGGAAGAAAGCTCAGGCCCATTAGTGATGACTCTGAAAGCATTGAAGAAAGTGATACAAGGAGAAAAGTTAAATCAGCAGAGAAAA
TAAGTACACAACGTCATGAGGTTATTCGAACCACAGCGTCTTCAGAACTTTCAGAGAAACCAGCTGAGTCTGTCACTTCTAAAAAGACAG
GACCCCTTAGTGCCCAGCCCTCTGTTGAAAAAGAGAACTTGGCAATAGAAAGTCAATCGGCTTTTATAGATAATTTTCAGGCAGCTAAAC
AAGCCTTGGCTGAGGCAACTGTTCAGGCAGCTGGAATGGCTGCTACTGGTGTAAAAGAACTCGCACAAAGGAGTTCCAGAATGGCACTGG
ATATTAACATCAAAGCCCCAGTTGTGGTCATCCCGCAGTCTCCAGTTTCTGAAAATGTTTTTGTTGCTGATTTTGGACTAATTACAATGA
CAAATACCTTTCATATGATAACAGAGAGCCAGAGCTCTCCCCCACCTGTTATTGATTTGATAACAATAAAGCTGAGTGAAATGCGACTAT
ACAGATCTCGATTTATTAATGATGCATACCAGGAAGTACTGGATCTACTCCTGCCATTAAATCTTGAGGTTGTGGTTGAACGAAATTTAT
GCTGGGAGTGGTACCAGGAAGTTCCTTGTTTTAATGTAAATGCTCAGCTGAAACCAATGGAGTTCATTCTTAGTCAAGAAGATATAACAA
CTATTTTTAAAACATTGCATGGCAATATATGGTATGAAAAAGATGGTAGTGCCTCACCTGCTGTAACAAAAGACCAATACAGTGCCACTA
GTGGAGTTACTACTAATGCTTCACACCATTCAGGAGGAGCAACTGTGGTGACAGCTGCTGTGGTAGAAGTACATTCACGTGCCTTACTAG
TTAAGACAACACTAAACATAAGCTTCAAAACTGATGATCTCACCATGGTGCTGTATAGTCCAGGTCCTAAACAGGCTTCCTTTACAGATG
TTCGTGATCCTTCTCTGAAACTTGCTGAATTTAAATTGGAGAATATTATAAGTACTTTAAAAATGTATACAGATGGCTCAACATTTTCTT
CCTTCTCATTAAAAAACTGTATTTTAGATGATAAAAGACCTCATGTCAAGAAAGCAACTCCTCGAATGATAGGACTGACAGTTGGTTTTG
ACAAAAAAGACATGATGGATATAAAGTACAGGAAAGTCAGAGATGGTTGTGTGACTGATGCGGTCTTTCAAGAAATGTATATTTGTGCAA
GCGTAGAATTTCTGCAGACTGTTGCAAATGTCTTTCTTGAGGCCTACACCACAGGCACTGCTGTAGAAACCAGTGTGCAAACATGGACTG
CTAAGGAAGAAGTACCTACACAGGAATCAGTGAAGTGGGAAATTAATGTTATTATTAAAAATCCTGAAATTGTGTTTGTAGCTGACATGA
CAAAAAATGATGCTCCTGCTTTAGTCATTACAACACAATGTGAAATTTGCTATAAAGGTAACCTTGAAAATAGTACAATGACTGCTGCCA
TTAAAGATCTCCAAGTGAGAGCCTGCCCGTTTCTTCCAGTCAAGAGAAAAGGCAAAATCACTACTGTTTTGCAGCCCTGTGACTTGTTTT
ATCAAACTACTCAGAAAGGTACAGATCCACAAGTGATCGATATGTCAGTAAAATCCCTGACACTAAAGGTTTCACCAGTTATTATAAATA
CTATGATTACCATAACTTCAGCACTGTATACAACTAAGGAAACCATCCCAGAAGAAACGGCTTCTTCTACTGCACATTTATGGGAAAAGA
AGGATACAAAGACTTTAAAAATGTGGTTTCTTGAAGAATCAAATGAAACTGAAAAAATAGCTCCCACAACTGAATTGGTACCCAAAGGCG
AGATGATAAAAATGAACATTGATTCTATTTTTATAGTTCTTGAGGCTGGAATTGGTCATAGAACAGTACCTATGCTTCTGGCAAAGTCAC
GTTTTTCAGGGGAAGGCAAAAACTGGAGTTCCCTAATAAATCTGCACTGTCAGCTTGAGCTAGAAGTGCATTATTATAATGAAATGTTTG
GTGTATGGGAGCCTTTGCTTGAACCCTTAGAAATTGATCAGACTGAGGATTTTAGACCATGGAATCTTGGTATCAAGATGAAAAAGAAAG
CAAAAATGGCCATTGTTGAGTCAGATCCTGAAGAAGAAAACTACAAAGTGCCAGAATATAAAACTGTCATCAGTTTCCATTCAAAAGACC
AATTAAACATTACATTATCCAAATGTGGTCTTGTAATGTTAAACAATTTAGTCAAGGCATTTACAGAAGCTGCCACTGGATCTTCAGCTG
ACTTCGTAAAGGATCTAGCACCATTTATGATTTTAAATTCCCTTGGACTTACTATTTCTGTTTCGCCAAGTGATTCTTTTAGTGTACTCA
ACATTCCTATGGCAAAATCATATGTATTGAAAAATGGAGAAAGTTTAAGTATGGATTATATCCGAACCAAGGACAATGATCATTTCAATG
CAATGACCAGCCTAAGCAGCAAACTCTTCTTCATTCTTCTTACACCTGTTAACCATTCTACTGCTGATAAGATTCCTTTAACAAAAGTGG
GACGACGTCTGTACACTGTAAGACACAGAGAGTCTGGCGTTGAAAGATCTATTGTTTGTCAAATTGATACAGTAGAAGGAAGTAAGAAGG
TCACAATTCGCTCCCCAGTGCAGATAAGAAATCATTTTTCAGTCCCACTGTCTGTTTACGAAGGGGATACCTTATTGGGAACTGCCTCAC
CTGAAAATGAATTCAACATACCATTAGGATCTTACCGATCATTCATTTTTCTGAAGCCAGAAGATGAGAACTATCAAATGTGTGAAGGAA
TTGACTTTGAAGAGATTATAAAAAATGATGGTGCTCTTCTAAAGAAGAAATGTAGATCTAAAAACCCTTCTAAGGAATCATTTCTCATTA
ATATTGTTCCAGAAAAAGATAATTTAACATCTCTATCAGTGTATTCAGAAGATGGTTGGGATTTACCATACATAATGCATTTGTGGCCAC
CTATCCTGCTCCGAAATCTTCTTCCTTACAAAATTGCTTATTATATAGAGGGAATTGAAAATTCGGTTTTTACTCTAAGTGAAGGACATT
CAGCCCAGATTTGTACTGCACAGTTGGGTAAAGCCAGGCTACATTTAAAATTACTTGACTATCTCAATCACGATTGGAAAAGTGAATATC
ACATAAAGCCTAATCAGCAAGACATTAGTTTTGTCAGTTTTACTTGTGTTACAGAAATGGAAAAGACTGATTTAGATATTGCTGTCCATA
TGACTTACAATACTGGTCAGACAGTTGTGGCATTTCATAGTCCTTATTGGATGGTCAATAAAACTGGCCGCATGTTACAGTACAAAGCAG
ACGGAATTCATCGAAAGCATCCACCTAATTATAAAAAGCCAGTTCTCTTTTCTTTTCAGCCAAATCACTTTTTTAATAACAATAAGGTTC
AACTTATGGTAACTGATAGTGAGTTGTCCAATCAGTTTTCAATTGATACTGTTGGTAGTCATGGAGCTGTTAAATGTAAAGGCCTGAAAA
TGGACTATCAAGTTGGTGTCACTATAGACCTGAGCAGTTTTAACATTACTAGAATTGTGACATTTACCCCTTTTTATATGATTAAAAACA
AAAGCAAATACCATATATCAGTGGCTGAAGAAGGAAATGATAAATGGCTCTCTCTTGATTTGGAGCAGTGTATCCCCTTTTGGCCTGAGT
ATGCTTCTAGTAAACTTCTTATTCAAGTCGAAAGGAGTGAAGATCCTCCCAAAAGGATATATTTTAACAAGCAGGAAAATTGTATTCTAT
TGCGTCTAGATAACGAGCTTGGAGGTATTATAGCAGAAGTGAATTTGGCCGAGCATTCTACAGTTATTACATTTTTAGATTATCATGATG
GAGCAGCTACATTCCTCTTAATAAATCACACAAAGAATGAACTTGTTCAATACAATCAAAGTTCTCTCAGTGAAATAGAAGATTCCCTCC
CTCCTGGTAAAGCCGTGTTTTATACATGGGCTGATCCGGTGGGCTCTAGAAGGCTGAAGTGGAGATGTAGAAAAAGCCATGGTGAAGTAA
CACAGAAGGATGATATGATGATGCCTATAGATTTGGGGGAAAAGACAATATATTTAGTTTCATTCTTTGAAGGTTTACAACGCATTATTT
TATTCACTGAAGATCCAAGGGTATTTAAAGTAACATATGAAAGTGAGAAAGCAGAGTTAGCAGAGCAAGAAATTGCAGTGGCATTACAAG
ATGTTGGAATTTCTCTTGTCAACAATTACACGAAGCAAGAAGTAGCCTATATAGGCATTACAAGTTCTGATGTGGTTTGGGAAACAAAGC
CCAAGAAGAAGGCAAGATGGAAGCCAATGAGTGTAAAGCACACTGAGAAGTTAGAGAGAGAATTTAAGGAATATACTGAATCTTCTCCTT
CAGAAGATAAGGTTATTCAGTTGGACACTAATGTTCCGGTTCGCCTAACCCCTACTGGTCATAACATGAAAATTCTGCAGCCGCATGTAA
TAGCTCTACGAAGAAATTATCTTCCAGCATTAAAAGTGGAATATAACACATCTGCACATCAATCATCATTTAGAATTCAGATTTACAGAA
TACAGATCCAAAATCAGATACATGGTGCTGTATTTCCCTTTGTGTTTTATCCTGTTAAACCTCCAAAGTCGGTCACCATGGATTCAGCAC
CAAAGCCCTTTACAGATGTCAGTATTGTCATGAGATCTGCAGGACATTCCCAGATATCACGTATTAAGTATTTCAAAGTATTGATTCAAG
AAATGGATCTCAGGTTAGATCTTGGGTTTATCTATGCTTTAACAGACCTTATGACAGAAGCTGAGGTGACTGAAAATACAGAGGTTGAGC
TTTTTCATAAAGATATAGAAGCTTTCAAAGAAGAATATAAAACAGCCTCATTAGTAGATCAATCACAAGTCAGCCTCTATGAATATTTTC
ATATATCTCCTATCAAGTTACATTTAAGTGTTTCACTGAGTTCCGGCAGAGAAGAAGCTAAAGATTCAAAACAAAATGGAGGACTGATTC
CAGTTCATTCTTTAAATCTTTTGCTGAAGAGTATTGGTGCCACACTGACAGATGTACAAGATGTAGTTTTTAAGCTTGCATTTTTTGAAC
TCAACTATCAGTTCCATACAACATCCGATCTACAGTCTGAAGTCATAAGACACTATTCAAAACAGGCCATTAAGCAGATGTATGTACTCA
TTCTTGGACTTGATGTTTTGGGAAATCCATTTGGCTTAATTAGAGAATTTTCTGAAGGTGTAGAAGCATTTTTTTATGAACCTTACCAGG
GAGCCATCCAGGGTCCTGAAGAGTTTGTGGAAGGAATGGCACTAGGACTTAAGGCACTAGTTGGTGGAGCTGTTGGTGGATTGGCTGGTG
CTGCCTCCAAAATCACCGGTGCTATGGCTAAGGGGGTAGCAGCTATGACCATGGATGAAGACTACCAACAGAAGAGAAGAGAAGCCATGA
ATAAGCAACCAGCTGGTTTTAGAGAAGGCATCACTCGTGGAGGAAAAGGCTTAGTTTCTGGATTTGTTAGTGGCATAACAGGAATTGTTA
CAAAACCAATCAAAGGAGCTCAAAAAGGAGGAGCAGCTGGTTTCTTTAAAGGTGTTGGGAAAGGTTTAGTAGGAGCGGTAGCAAGGCCAA
CTGGAGGCATCATAGACATGGCTAGCAGTACATTTCAGGGAATAAAAAGAGCTACAGAGACTTCTGAAGTGGAGAGTCTGCGACCTCCTC
GGTTCTTCAATGAAGATGGAGTTATCAGACCGTACAGGTTGAGGGATGGGACTGGAAATCAAATGTTACAGGTCATGGAAAATGGAAGAT
TTGCAAAATACAAATATTTTACCCATGTCATGATCAATAAGACAGATATGCTAATGATAACCAGACGTGGTGTATTGTTTGTAACAAAGG
GAACATTTGGACAACTCACGTGTGAGTGGCAGTATAGTTTTGATGAATTTACCAAAGAGCCATTCATTGTTCATGGGAGAAGATTGCGCA
TTGAAGCAAAGGAACGAGTGAAGTCTGTATTTCATGCCAGAGAGTTTGGAAAAATAATTAACTTCAAGACCCCAGAGGATGCCAGGTGGA
TCCTCACAAAGCTACAAGAAGCAAGAGAACCTTCTCCGAGCCTCTGACAGAGAACACTGCCTGAAGACACACAGCAATAAGTGATTACAG
CTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATGCTAAAAAACAAAAAC
AAACAAAAAAACAAAAACAAAAAAACAAAACCAGAATCAGGTAAAACAGCTATGTGATTAAAATATTTTAATTCTTCAGCAATTACCCGG
TTTTCTAAATTGAATCATGCATCTATTTATAATTCTAATTATTTTGTAAAAGAAGACAAAATTATGAATCTTAAGTATTTGCTCCATCTT
TTTCTCTGTAATGGTGGAGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTCACATTTTGTACTTCTGTCA
TGCTTATTTCAAACTCCCTGAGTGATGGGTAAGAAATCAAACATTGCCTCAGTGGTATCAAGAGAACTTTGGTGGTGGTTTCTTCAGAAT
CATGAAGTTCTTTTGCCAGATAAATATTTTGATATTATTTTCCTTTTTAATATAAAGGATAGGTTTGAATTGTACTTAAAATGCATAGCA
TTATTAAAAACAATCTTTTAAAATATAATTTATAACATAGATTGAAGCCTCCCCTTAAGAAACCTTAAAGAAATAAGTATCCTACTCAAA
AAAGGAAGTCTGTTTCAGAACTTTAGGGCCTTTGAAATATTTCCTCAAGCCTATTTCATGAGATCTACTTGGTTTACCCAAGTCATGTTT
TTAATAGACTGCTAATATCAAAGGAGAATTTTTAAAGCCTTAACAATGCCTACTTTCCATTCACTGTTAACATGGAATAAACACAATTCC
CAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATCTAACCCAATAACCTGTCC
CGTTGCCAATAGATTGAGAATTTCTGGTTTGCTTACTCTACAGTTATTCAAATGAGAGTCACGCTTTTAAATTTACAGCTCATCACAGAA
ATCATCAGCTATACATTAGTAAAAATAAGGACATGAGGTTTTCTTTCTTGGTTTTTGTCCAAGATCTTTGCACCTTAATATTAATGGACT
GTTTCAGGTAAAAGAGAATGAATGTATGATTGTGAACTGTGAAGAGAATGATGCAGGATCCTATTTAGTTACTGAATAATACAGAGTATT
CAATGCATGTTGTATGTGCCACCAAGTTACTATTAACTGTTTTTGGAATTGAAGACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAG
GCTCCTTAAACCCTCGCTTTGTTGTAAAAGCTAAAATAAACAGCATGCTATATTGTAATTGTATTTCTTGCTGACCAAATCTACTAAATG

>In-frame_ENST00000281453_ENST00000376636_TCGA-IN-8462-11A_MLF1IP_chr4_185637551_-_VPS13A_chr9_79910458_length(amino acids)=2232AA_start in transcript=8_stop in transcript=6706
MFGAARGLAGASSRSRAESGTMAPRGRRRPRPHRSEGARRSKNTLERTHSMKDKAGQKCKPIDVFDFPDNSDVSSIGRLGENEKDEETYE
TFDPPLHSTAIYADEEEFSKHCGLSLSSTPPGKEAKRSSDTSGNEASEIESVKISAKKPGRKLRPISDDSESIEESDTRRKVKSAEKIST
QRHEVIRTTASSELSEKPAESVTSKKTGPLSAQPSVEKENLAIESQSAFIDNFQAAKQALAEATVQAAGMAATGVKELAQRSSRMALDIN
IKAPVVVIPQSPVSENVFVADFGLITMTNTFHMITESQSSPPPVIDLITIKLSEMRLYRSRFINDAYQEVLDLLLPLNLEVVVERNLCWE
WYQEVPCFNVNAQLKPMEFILSQEDITTIFKTLHGNIWYEKDGSASPAVTKDQYSATSGVTTNASHHSGGATVVTAAVVEVHSRALLVKT
TLNISFKTDDLTMVLYSPGPKQASFTDVRDPSLKLAEFKLENIISTLKMYTDGSTFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKK
DMMDIKYRKVRDGCVTDAVFQEMYICASVEFLQTVANVFLEAYTTGTAVETSVQTWTAKEEVPTQESVKWEINVIIKNPEIVFVADMTKN
DAPALVITTQCEICYKGNLENSTMTAAIKDLQVRACPFLPVKRKGKITTVLQPCDLFYQTTQKGTDPQVIDMSVKSLTLKVSPVIINTMI
TITSALYTTKETIPEETASSTAHLWEKKDTKTLKMWFLEESNETEKIAPTTELVPKGEMIKMNIDSIFIVLEAGIGHRTVPMLLAKSRFS
GEGKNWSSLINLHCQLELEVHYYNEMFGVWEPLLEPLEIDQTEDFRPWNLGIKMKKKAKMAIVESDPEEENYKVPEYKTVISFHSKDQLN
ITLSKCGLVMLNNLVKAFTEAATGSSADFVKDLAPFMILNSLGLTISVSPSDSFSVLNIPMAKSYVLKNGESLSMDYIRTKDNDHFNAMT
SLSSKLFFILLTPVNHSTADKIPLTKVGRRLYTVRHRESGVERSIVCQIDTVEGSKKVTIRSPVQIRNHFSVPLSVYEGDTLLGTASPEN
EFNIPLGSYRSFIFLKPEDENYQMCEGIDFEEIIKNDGALLKKKCRSKNPSKESFLINIVPEKDNLTSLSVYSEDGWDLPYIMHLWPPIL
LRNLLPYKIAYYIEGIENSVFTLSEGHSAQICTAQLGKARLHLKLLDYLNHDWKSEYHIKPNQQDISFVSFTCVTEMEKTDLDIAVHMTY
NTGQTVVAFHSPYWMVNKTGRMLQYKADGIHRKHPPNYKKPVLFSFQPNHFFNNNKVQLMVTDSELSNQFSIDTVGSHGAVKCKGLKMDY
QVGVTIDLSSFNITRIVTFTPFYMIKNKSKYHISVAEEGNDKWLSLDLEQCIPFWPEYASSKLLIQVERSEDPPKRIYFNKQENCILLRL
DNELGGIIAEVNLAEHSTVITFLDYHDGAATFLLINHTKNELVQYNQSSLSEIEDSLPPGKAVFYTWADPVGSRRLKWRCRKSHGEVTQK
DDMMMPIDLGEKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAEQEIAVALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKK
KARWKPMSVKHTEKLEREFKEYTESSPSEDKVIQLDTNVPVRLTPTGHNMKILQPHVIALRRNYLPALKVEYNTSAHQSSFRIQIYRIQI
QNQIHGAVFPFVFYPVKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLRLDLGFIYALTDLMTEAEVTENTEVELFH
KDIEAFKEEYKTASLVDQSQVSLYEYFHISPIKLHLSVSLSSGREEAKDSKQNGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNY
QFHTTSDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAAS
KITGAMAKGVAAMTMDEDYQQKRREAMNKQPAGFREGITRGGKGLVSGFVSGITGIVTKPIKGAQKGGAAGFFKGVGKGLVGAVARPTGG
IIDMASSTFQGIKRATETSEVESLRPPRFFNEDGVIRPYRLRDGTGNQMLQVMENGRFAKYKYFTHVMINKTDMLMITRRGVLFVTKGTF

--------------------------------------------------------------
>In-frame_ENST00000281453_ENST00000360280_TCGA-IN-8462-11A_MLF1IP_chr4_185637551_-_VPS13A_chr9_79910458_length(transcript)=12242nt_BP=689nt
CGGATTGGCTGTTCGGAGCGGCGAGGGGCTTGGCGGGAGCTTCCAGTCGCTCGAGAGCGGAGAGCGGCACCATGGCCCCGCGGGGGCGGC
GGCGGCCGCGGCCTCACAGGTCTGAGGGCGCAAGACGTTCAAAGAACACTTTAGAAAGAACACATTCCATGAAAGATAAAGCTGGTCAAA
AGTGCAAGCCTATTGACGTGTTCGACTTTCCTGATAATTCTGATGTCTCAAGCATTGGCAGGCTGGGTGAAAATGAGAAAGATGAAGAAA
CTTATGAGACCTTTGATCCTCCTTTACATAGCACAGCTATATATGCTGATGAAGAAGAATTCTCCAAACATTGTGGACTGTCTCTCTCTT
CAACTCCTCCAGGAAAAGAAGCAAAAAGAAGTTCAGACACTTCTGGAAATGAAGCAAGTGAAATCGAATCTGTAAAAATTAGTGCAAAAA
AGCCAGGAAGAAAGCTCAGGCCCATTAGTGATGACTCTGAAAGCATTGAAGAAAGTGATACAAGGAGAAAAGTTAAATCAGCAGAGAAAA
TAAGTACACAACGTCATGAGGTTATTCGAACCACAGCGTCTTCAGAACTTTCAGAGAAACCAGCTGAGTCTGTCACTTCTAAAAAGACAG
GACCCCTTAGTGCCCAGCCCTCTGTTGAAAAAGAGAACTTGGCAATAGAAAGTCAATCGGCTTTTATAGATAATTTTCAGGCAGCTAAAC
AAGCCTTGGCTGAGGCAACTGTTCAGGCAGCTGGAATGGCTGCTACTGGTGTAAAAGAACTCGCACAAAGGAGTTCCAGAATGGCACTGG
ATATTAACATCAAAGCCCCAGTTGTGGTCATCCCGCAGTCTCCAGTTTCTGAAAATGTTTTTGTTGCTGATTTTGGACTAATTACAATGA
CAAATACCTTTCATATGATAACAGAGAGCCAGAGCTCTCCCCCACCTGTTATTGATTTGATAACAATAAAGCTGAGTGAAATGCGACTAT
ACAGATCTCGATTTATTAATGATGCATACCAGGAAGTACTGGATCTACTCCTGCCATTAAATCTTGAGGTTGTGGTTGAACGAAATTTAT
GCTGGGAGTGGTACCAGGAAGTTCCTTGTTTTAATGTAAATGCTCAGCTGAAACCAATGGAGTTCATTCTTAGTCAAGAAGATATAACAA
CTATTTTTAAAACATTGCATGGCAATATATGGTATGAAAAAGATGGTAGTGCCTCACCTGCTGTAACAAAAGACCAATACAGTGCCACTA
GTGGAGTTACTACTAATGCTTCACACCATTCAGGAGGAGCAACTGTGGTGACAGCTGCTGTGGTAGAAGTACATTCACGTGCCTTACTAG
TTAAGACAACACTAAACATAAGCTTCAAAACTGATGATCTCACCATGGTGCTGTATAGTCCAGGTCCTAAACAGGCTTCCTTTACAGATG
TTCGTGATCCTTCTCTGAAACTTGCTGAATTTAAATTGGAGAATATTATAAGTACTTTAAAAATGTATACAGATGGCTCAACATTTTCTT
CCTTCTCATTAAAAAACTGTATTTTAGATGATAAAAGACCTCATGTCAAGAAAGCAACTCCTCGAATGATAGGACTGACAGTTGGTTTTG
ACAAAAAAGACATGATGGATATAAAGTACAGGAAAGTCAGAGATGGTTGTGTGACTGATGCGGTCTTTCAAGAAATGTATATTTGTGCAA
GCGTAGAATTTCTGCAGACTGTTGCAAATGTCTTTCTTGAGGCCTACACCACAGGCACTGCTGTAGAAACCAGTGTGCAAACATGGACTG
CTAAGGAAGAAGTACCTACACAGGAATCAGTGAAGTGGGAAATTAATGTTATTATTAAAAATCCTGAAATTGTGTTTGTAGCTGACATGA
CAAAAAATGATGCTCCTGCTTTAGTCATTACAACACAATGTGAAATTTGCTATAAAGGTAACCTTGAAAATAGTACAATGACTGCTGCCA
TTAAAGATCTCCAAGTGAGAGCCTGCCCGTTTCTTCCAGTCAAGAGAAAAGGCAAAATCACTACTGTTTTGCAGCCCTGTGACTTGTTTT
ATCAAACTACTCAGAAAGGTACAGATCCACAAGTGATCGATATGTCAGTAAAATCCCTGACACTAAAGGTTTCACCAGTTATTATAAATA
CTATGATTACCATAACTTCAGCACTGTATACAACTAAGGAAACCATCCCAGAAGAAACGGCTTCTTCTACTGCACATTTATGGGAAAAGA
AGGATACAAAGACTTTAAAAATGTGGTTTCTTGAAGAATCAAATGAAACTGAAAAAATAGCTCCCACAACTGAATTGGTACCCAAAGGCG
AGATGATAAAAATGAACATTGATTCTATTTTTATAGTTCTTGAGGCTGGAATTGGTCATAGAACAGTACCTATGCTTCTGGCAAAGTCAC
GTTTTTCAGGGGAAGGCAAAAACTGGAGTTCCCTAATAAATCTGCACTGTCAGCTTGAGCTAGAAGTGCATTATTATAATGAAATGTTTG
GTGTATGGGAGCCTTTGCTTGAACCCTTAGAAATTGATCAGACTGAGGATTTTAGACCATGGAATCTTGGTATCAAGATGAAAAAGAAAG
CAAAAATGGCCATTGTTGAGTCAGATCCTGAAGAAGAAAACTACAAAGTGCCAGAATATAAAACTGTCATCAGTTTCCATTCAAAAGACC
AATTAAACATTACATTATCCAAATGTGGTCTTGTAATGTTAAACAATTTAGTCAAGGCATTTACAGAAGCTGCCACTGGATCTTCAGCTG
ACTTCGTAAAGGATCTAGCACCATTTATGATTTTAAATTCCCTTGGACTTACTATTTCTGTTTCGCCAAGTGATTCTTTTAGTGTACTCA
ACATTCCTATGGCAAAATCATATGTATTGAAAAATGGAGAAAGTTTAAGTATGGATTATATCCGAACCAAGGACAATGATCATTTCAATG
CAATGACCAGCCTAAGCAGCAAACTCTTCTTCATTCTTCTTACACCTGTTAACCATTCTACTGCTGATAAGATTCCTTTAACAAAAGTGG
GACGACGTCTGTACACTGTAAGACACAGAGAGTCTGGCGTTGAAAGATCTATTGTTTGTCAAATTGATACAGTAGAAGGAAGTAAGAAGG
TCACAATTCGCTCCCCAGTGCAGATAAGAAATCATTTTTCAGTCCCACTGTCTGTTTACGAAGGGGATACCTTATTGGGAACTGCCTCAC
CTGAAAATGAATTCAACATACCATTAGGATCTTACCGATCATTCATTTTTCTGAAGCCAGAAGATGAGAACTATCAAATGTGTGAAGGAA
TTGACTTTGAAGAGATTATAAAAAATGATGGTGCTCTTCTAAAGAAGAAATGTAGATCTAAAAACCCTTCTAAGGAATCATTTCTCATTA
ATATTGTTCCAGAAAAAGATAATTTAACATCTCTATCAGTGTATTCAGAAGATGGTTGGGATTTACCATACATAATGCATTTGTGGCCAC
CTATCCTGCTCCGAAATCTTCTTCCTTACAAAATTGCTTATTATATAGAGGGAATTGAAAATTCGGTTTTTACTCTAAGTGAAGGACATT
CAGCCCAGATTTGTACTGCACAGTTGGGTAAAGCCAGGCTACATTTAAAATTACTTGACTATCTCAATCACGATTGGAAAAGTGAATATC
ACATAAAGCCTAATCAGCAAGACATTAGTTTTGTCAGTTTTACTTGTGTTACAGAAATGGAAAAGACTGATTTAGATATTGCTGTCCATA
TGACTTACAATACTGGTCAGACAGTTGTGGCATTTCATAGTCCTTATTGGATGGTCAATAAAACTGGCCGCATGTTACAGTACAAAGCAG
ACGGAATTCATCGAAAGCATCCACCTAATTATAAAAAGCCAGTTCTCTTTTCTTTTCAGCCAAATCACTTTTTTAATAACAATAAGGTTC
AACTTATGGTAACTGATAGTGAGTTGTCCAATCAGTTTTCAATTGATACTGTTGGTAGTCATGGAGCTGTTAAATGTAAAGGCCTGAAAA
TGGACTATCAAGTTGGTGTCACTATAGACCTGAGCAGTTTTAACATTACTAGAATTGTGACATTTACCCCTTTTTATATGATTAAAAACA
AAAGCAAATACCATATATCAGTGGCTGAAGAAGGAAATGATAAATGGCTCTCTCTTGATTTGGAGCAGTGTATCCCCTTTTGGCCTGAGT
ATGCTTCTAGTAAACTTCTTATTCAAGTCGAAAGGAGTGAAGATCCTCCCAAAAGGATATATTTTAACAAGCAGGAAAATTGTATTCTAT
TGCGTCTAGATAACGAGCTTGGAGGTATTATAGCAGAAGTGAATTTGGCCGAGCATTCTACAGTTATTACATTTTTAGATTATCATGATG
GAGCAGCTACATTCCTCTTAATAAATCACACAAAGAATGAACTTGTTCAATACAATCAAAGTTCTCTCAGTGAAATAGAAGATTCCCTCC
CTCCTGGTAAAGCCGTGTTTTATACATGGGCTGATCCGGTGGGCTCTAGAAGGCTGAAGTGGAGATGTAGAAAAAGCCATGGTGAAGTAA
CACAGAAGGATGATATGATGATGCCTATAGATTTGGGGGAAAAGACAATATATTTAGTTTCATTCTTTGAAGGTTTACAACGCATTATTT
TATTCACTGAAGATCCAAGGGTATTTAAAGTAACATATGAAAGTGAGAAAGCAGAGTTAGCAGAGCAAGAAATTGCAGTGGCATTACAAG
ATGTTGGAATTTCTCTTGTCAACAATTACACGAAGCAAGAAGTAGCCTATATAGGCATTACAAGTTCTGATGTGGTTTGGGAAACAAAGC
CCAAGAAGAAGGCAAGATGGAAGCCAATGAGTGTAAAGCACACTGAGAAGTTAGAGAGAGAATTTAAGGAATATACTGAATCTTCTCCTT
CAGAAGATAAGGTTATTCAGTTGGACACTAATGTTCCGGTTCGCCTAACCCCTACTGGTCATAACATGAAAATTCTGCAGCCGCATGTAA
TAGCTCTACGAAGAAATTATCTTCCAGCATTAAAAGTGGAATATAACACATCTGCACATCAATCATCATTTAGAATTCAGATTTACAGAA
TACAGATCCAAAATCAGATACATGGTGCTGTATTTCCCTTTGTGTTTTATCCTGTTAAACCTCCAAAGTCGGTCACCATGGATTCAGCAC
CAAAGCCCTTTACAGATGTCAGTATTGTCATGAGATCTGCAGGACATTCCCAGATATCACGTATTAAGTATTTCAAAGTATTGATTCAAG
AAATGGATCTCAGGTTAGATCTTGGGTTTATCTATGCTTTAACAGACCTTATGACAGAAGCTGAGGTGACTGAAAATACAGAGGTTGAGC
TTTTTCATAAAGATATAGAAGCTTTCAAAGAAGAATATAAAACAGCCTCATTAGTAGATCAATCACAAGTCAGCCTCTATGAATATTTTC
ATATATCTCCTATCAAGTTACATTTAAGTGTTTCACTGAGTTCCGGCAGAGAAGAAGCTAAAGATTCAAAACAAAATGGAGGACTGATTC
CAGTTCATTCTTTAAATCTTTTGCTGAAGAGTATTGGTGCCACACTGACAGATGTACAAGATGTAGTTTTTAAGCTTGCATTTTTTGAAC
TCAACTATCAGTTCCATACAACATCCGATCTACAGTCTGAAGTCATAAGACACTATTCAAAACAGGCCATTAAGCAGATGTATGTACTCA
TTCTTGGACTTGATGTTTTGGGAAATCCATTTGGCTTAATTAGAGAATTTTCTGAAGGTGTAGAAGCATTTTTTTATGAACCTTACCAGG
GAGCCATCCAGGGTCCTGAAGAGTTTGTGGAAGGAATGGCACTAGGACTTAAGGCACTAGTTGGTGGAGCTGTTGGTGGATTGGCTGGTG
CTGCCTCCAAAATCACCGGTGCTATGGCTAAGGGGGTAGCAGCTATGACCATGGATGAAGACTACCAACAGAAGAGAAGAGAAGCCATGA
ATAAGCAACCAGCTGGTTTTAGAGAAGGCATCACTCGTGGAGGAAAAGGCTTAGTTTCTGGATTTGTTAGTGGCATAACAGGAATTGTTA
CAAAACCAATCAAAGGAGCTCAAAAAGGAGGAGCAGCTGGTTTCTTTAAAGGTGTTGGGAAAGGTTTAGTAGGAGCGGTAGCAAGGCCAA
CTGGAGGCATCATAGACATGGCTAGCAGTACATTTCAGGGAATAAAAAGAGCTACAGAGACTTCTGAAGTGGAGAGTCTGCGACCTCCTC
GGTTCTTCAATGAAGATGGAGTTATCAGACCGTACAGGTTGAGGGATGGGACTGGAAATCAAATGTTACAGGTCATGGAAAATGGAAGAT
TTGCAAAATACAAATATTTTACCCATGTCATGATCAATAAGACAGATATGCTAATGATAACCAGACGTGGTGTATTGTTTGTAACAAAGG
GAACATTTGGACAACTCACGTGTGAGTGGCAGTATAGTTTTGATGAATTTACCAAAGAGCCATTCATTGTTCATGGGAGAAGATTGCGCA
TTGAAGCAAAGGAACGAGTGAAGTCTGTATTTCATGCCAGAGAGTTTGGAAAAATAATTAACTTCAAGACCCCAGAGGATGCCAGGTGGA
TCCTCACAAAGCTACAAGAAGCAAGAGAACCTTCTCCGAGCCTCTGACAGAGAACACTGCCTGAAGACACACAGCAATAAGTGATTACAG
CTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTGGATGCTAAAAAACAAAAAC
AAACAAAAAAACAAAAACAAAAAAACAAAACCAGAATCAGGTAAAACAGCTATGTGATTAAAATATTTTAATTCTTCAGCAATTACCCGG
TTTTCTAAATTGAATCATGCATCTATTTATAATTCTAATTATTTTGTAAAAGAAGACAAAATTATGAATCTTAAGTATTTGCTCCATCTT
TTTCTCTGTAATGGTGGAGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTCACATTTTGTACTTCTGTCA
TGCTTATTTCAAACTCCCTGAGTGATGGGTAAGAAATCAAACATTGCCTCAGTGGTATCAAGAGAACTTTGGTGGTGGTTTCTTCAGAAT
CATGAAGTTCTTTTGCCAGATAAATATTTTGATATTATTTTCCTTTTTAATATAAAGGATAGGTTTGAATTGTACTTAAAATGCATAGCA
TTATTAAAAACAATCTTTTAAAATATAATTTATAACATAGATTGAAGCCTCCCCTTAAGAAACCTTAAAGAAATAAGTATCCTACTCAAA
AAAGGAAGTCTGTTTCAGAACTTTAGGGCCTTTGAAATATTTCCTCAAGCCTATTTCATGAGATCTACTTGGTTTACCCAAGTCATGTTT
TTAATAGACTGCTAATATCAAAGGAGAATTTTTAAAGCCTTAACAATGCCTACTTTCCATTCACTGTTAACATGGAATAAACACAATTCC
CAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAATCTAACCCAATAACCTGTCC
CGTTGCCAATAGATTGAGAATTTCTGGTTTGCTTACTCTACAGTTATTCAAATGAGAGTCACGCTTTTAAATTTACAGCTCATCACAGAA
ATCATCAGCTATACATTAGTAAAAATAAGGACATGAGGTTTTCTTTCTTGGTTTTTGTCCAAGATCTTTGCACCTTAATATTAATGGACT
GTTTCAGGTAAAAGAGAATGAATGTATGATTGTGAACTGTGAAGAGAATGATGCAGGATCCTATTTAGTTACTGAATAATACAGAGTATT
CAATGCATGTTGTATGTGCCACCAAGTTACTATTAACTGTTTTTGGAATTGAAGACTCTGTATAGTCAATAGTTGTGAAATTCTTCTCAG
GCTCCTTAAACCCTCGCTTTGTTGTAAAAGCTAAAATAAACAGCATGCTATATTGTAATTGTATTTCTTGCTGACCAAATCTACTAAATG
CTATTGATTTCTCTCTGATTACTAAAACACATTGTTTATTCTCAGTAGTTTCCCCCAAAATGCTTTTTTCTTTGCTGAACTTAAATTGAA
TCAAACCACAAGTTTAAAATCACATGAAAGTGTGTTTCCATGTTGACCTTTGTTTAAAAAAAAAAAAAAGTGCTTATTTTCTCTGTCGCT
AAGCTCCTCCAGTTTTGCTTTTGTCAGAATTAAACTTAACAGTAGAGGTAGTCAGAAAGCTTGCATCAGACTGTCCTCATCCAAAACGAA
ATACTTCATTACCCAATGTTATGATTTCACCATTCTCAGAAAAATTACAGTCCCCTGCCTCCCTGGGTGTAGTGTCGTGAAGTAGAAAAG
CCTTACATAAATAGTAAACATAGAAATTCTTCTGGTGCCCTCTGGCAGCCAGCAGGAGTGGGTCTTGTGACTAATCCACATGGAAAGGAT
AGTGCCTGTCTTTCCTGTTCCCTTGCCATAAGAACCGTGAAATCTCTCCTTTCCCTGCCACTCGTTTACTCATCACCTCCTCCCATCACT
TCCTTGTCTCTAGACTAGAGGGACCCACAGTTTTAAGAGCTACATCATATCATTTGTTGTTTTAGAAGATTGTCTTCATCTAAACAAAAA
CACTAAGAAATCAGTAGATCACTAGATAATGAGTCAGTGTTTTTAGCATCACATTTTACAATTTACAGTTTTTGTTTGATTCTGTAGCCC
ATTTTTCTTGAAGGTTAGAATAAGAATCTTCTTGTATTTGAAAACCATCTGCCCTAAATTACATTTAACTACAAGAAATGGCTCTCTGCT
GGAGAAATTTAAGCTTGTCTTAGTTGTTTGGTAGTGGCTATGGAATGAGAGGTGTTGAGTCTTGTGCCCCTTCCATGTATTATTTGCTAA
CTAACTATATTACTAGGCCCTTAATTCCAGCACAGCATGTCTTCTGGTCTATGATAATTGTGTGAGGACTAAGGCAGAGTGCCTGTTCCC
TGCCAACTCTCCACCAGAAAATCATAATCAGAAAGAGTGACTTTGATTTCTGGTACTTGTGATCAAAAGCAGCTTGTGATTTCTTCACAT
TTGCAAAATACTCTCTGAGCCAAAAGGCACATACAGTTCTCCAGTGTCTTCCCTTTTAGAGTATACATATTTGCTGCTTTTCCTTTAGTG
TTCACAAAAATCCCAAGGTCAGTTTAGTGTGGCTGAGTTGTTGTTATCTGGACCCTAAACAATCATTACCACCTGTAGACAGTTCTTACC
TACCCCTCTCCTCCACAATCCTAGTCCATTTGGAGGCAACTATCCTGTGGCCTCCAAGTGAATAAATCTTTCTTACACTTACTTACGTGA
TATTTTCTATCATAATTATCTCTCTCATTTCTTCCAATAGTAATAGCGGTAATATTGTTCCATTGAATATCTATGCACCTAGCTCATCTC
TTAGAAACATCCCACATAGTAGCATCGTATTACTCTCTGGTAAAAAGAAAGATTAAATTAAAAGGACTCTACACAGTGCTGAATTTCCTG
CACCTAAATTATTCAGTTATCACTTGCCAGTATTAGTTGATCCTTCAGGCTATGCCAAGTGCCCCCTCATGTAGGCCTCTGTATTAAAAA
GATTGGGACAAAATACTTGATTAGTTTGCCTGTAGAAGCTCAAAGTGTGTACCAAATACATTGACAGTGGATGCTTTCATGGCTCAGCCA
ACACAGTTCAGAGGAATCTTTTCGGCTTCCAGGGCATTGCTTGTTACCTTTTGTCAGGATCAACCCAAATCCTCAGGGATGCTGTTTTTC
CACACTGTAAGTCCTAACTCATTAGTGGGTCATGAAATCAACTTAACAGCTCAAGACCAGTATATTTTAAACGTGAAATAATAAAAAATA
GAGGAACAATAGAGCATATAAAATGGTTAAGTATTGGTTCCTGAAATACTGTTTCAGCTAAATATTCTATTTACTGTGTATACTGGGTCA
CAATATAAAGTGTTTCCTGTTATGAAATGCAATTTAAAAAAAGAAAGCTTGAAAGACTGCTGCAGGAGGCACCGGCCATCCAGTGATTGT
TGGAAGAGTCTGGATTGTGTGGAGCCTGACCTTAGATAAGGAGCAGCAGATCCACAACTCAGGAAGTCTAGAGATGCTTAGCACTTCTTC
TTTTGAGTGAGAAGATGGAATCACTCTTGGTTTCTAAAATATTTTTCTTCTCTGCTGTGTATCGGGCAACCTCACATGATTCAGTGGGAC
CAGAAAAAGCATAGAAAAATTAGATCCACACACAGCACCCAAAAAAGGCCATAGTCTTTTGTTTACCTAGATGTATTTTAACCTCTTTAC
CACTAAGCATTTTACTATAATAGAACTGGGGACATACATTGTCCTTTTGAGTCCGTTGAATCTGCACCATCTACCTTTTGGCTGATTCAC
CATACAGGTGGCAAAGGCCTTTAAAAATGGGGAGCTAATACGTAGGGCACATTCTGGTAGGGCCAAAATATTCAGTGTCTGGGGGGTGCT
ATGCAAATATCAATGACTTTTTACTAAAAACAGTGGATTTCCTCATTTCTTTAAGATCCAAGTAGAAAATGTAAATAACTTACATTCTGT
ATGCAGGACTCAATACAGACTTAGTCAATCTGATTTTTTTTGGTGCTTTTCAGTATAGCGCAACTCTAAAAGGAAACCCATTCACCCTCC
TTAGTCCTTTGAAGTATACTTTTGAAATTATACCTTATTGTTAATGGCAACCTAATCAAGCTAGGATTTGTCGGTTAAAATTTTGATTCT
TGTAATCTGTACTGTCAATTTTTGGCCACTCTGGCTGTTACAGCAAACTTTTCTCCCACTGTCATAATTGGTCTAAAGTAGTATTTGTTT
CAGGACTATCCAAAAAGCAAGGCCAGCACATTGAGAAGATGCAGAATCCTACTCTATTACAAACCTCACTCATGTTTCTTTTATTGAAAC
CTTTTTCTACTTTATATTTCCTCTTTTGTAAATTTTTCCATGTCATTTAAAAAATTTTTTACTTTAGAATTACAGATTAGTTCTTTTTTT
AAAGCATTATGGCATTTTCAAAAAAAAAATTATTTTGGTTACCCAAAAAGCTATACAAGAAATATAACTTCAATTTTTTAGGTTGATATG
GGTATATTTTTAAAGTTTTTATTACTTTATACAAATACAAATTAATTTATATTATAGTTTAACACCTGCTATGATGATAGATATCACACT
GCTATGATAGAAAATCCCTGTCTGTCATTGAACTATTCATTTAGTGTTACTCTGATATGTTAATAATGTATTCCTTCTAATGAAGTCCTT
GTAACAAGAAACCCTGTGAGATTGGTATAATGAGATATCAAATAATCAGAAGTATAATTAAAATAGAACATGTTGGAAAATCCCAACATT
TCCTGTTATGCCGTCATACCTCCGGTGTTCAGTTTGTTACTCAAAAGTTCCCAGTTCTTAGGCTGAAAAACATTCAAGTAAAAATGTAGC
ATAGATTACACTGAAATATTTTCAGTATCAATGATTTAATATCCACACAAACTATTAGGAATGGTATCTGGAACTTGTTACAAGGTCAGA
TAAACTGTTACAGAATTTTAGAAATAATTATCTCTGTATGTGACTGTGTATTACATATAAAAATGAATTTTTCAGGAAAAGTGCACTTTA
AAAATACTTTCTCTTGCTAGTTTTTTAAATTGATGAAATAGCCTGTGCTGCTTTGGAATGCTTATTCTTTCTTTGATGAAAATACGGTCA
TTGATTATGATAATTTTAAAAATATCTATTTCTGCATCGCTGCAGGATTTCCTACACTTTTCTGTTCCTCATCCCTCTTTTATGTGTGCT
TGGCTCAGTTGCCTGTTACACAGCCTCTGCCTTGGTTTTGTGTATTCTAAGATAATTTATAAACACAGATATTTACAGTGAAGTTCTTCC
TTTTGAAACTAATCTTATTCTTTTATTCCTCTCTCTAAAAATTGGTTGGCCATGCTCACTAATGATTTTTTTTCTTAACAATAAGCATTT
CTTGGTATTGGTAGATTTGGATTGCATGGTAAGATGACTGCCCATTTTCACCATGTATACCTTTGTCAAATAAAGATTTCTGATCTTTGG

>In-frame_ENST00000281453_ENST00000360280_TCGA-IN-8462-11A_MLF1IP_chr4_185637551_-_VPS13A_chr9_79910458_length(amino acids)=2232AA_start in transcript=8_stop in transcript=6706
MFGAARGLAGASSRSRAESGTMAPRGRRRPRPHRSEGARRSKNTLERTHSMKDKAGQKCKPIDVFDFPDNSDVSSIGRLGENEKDEETYE
TFDPPLHSTAIYADEEEFSKHCGLSLSSTPPGKEAKRSSDTSGNEASEIESVKISAKKPGRKLRPISDDSESIEESDTRRKVKSAEKIST
QRHEVIRTTASSELSEKPAESVTSKKTGPLSAQPSVEKENLAIESQSAFIDNFQAAKQALAEATVQAAGMAATGVKELAQRSSRMALDIN
IKAPVVVIPQSPVSENVFVADFGLITMTNTFHMITESQSSPPPVIDLITIKLSEMRLYRSRFINDAYQEVLDLLLPLNLEVVVERNLCWE
WYQEVPCFNVNAQLKPMEFILSQEDITTIFKTLHGNIWYEKDGSASPAVTKDQYSATSGVTTNASHHSGGATVVTAAVVEVHSRALLVKT
TLNISFKTDDLTMVLYSPGPKQASFTDVRDPSLKLAEFKLENIISTLKMYTDGSTFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKK
DMMDIKYRKVRDGCVTDAVFQEMYICASVEFLQTVANVFLEAYTTGTAVETSVQTWTAKEEVPTQESVKWEINVIIKNPEIVFVADMTKN
DAPALVITTQCEICYKGNLENSTMTAAIKDLQVRACPFLPVKRKGKITTVLQPCDLFYQTTQKGTDPQVIDMSVKSLTLKVSPVIINTMI
TITSALYTTKETIPEETASSTAHLWEKKDTKTLKMWFLEESNETEKIAPTTELVPKGEMIKMNIDSIFIVLEAGIGHRTVPMLLAKSRFS
GEGKNWSSLINLHCQLELEVHYYNEMFGVWEPLLEPLEIDQTEDFRPWNLGIKMKKKAKMAIVESDPEEENYKVPEYKTVISFHSKDQLN
ITLSKCGLVMLNNLVKAFTEAATGSSADFVKDLAPFMILNSLGLTISVSPSDSFSVLNIPMAKSYVLKNGESLSMDYIRTKDNDHFNAMT
SLSSKLFFILLTPVNHSTADKIPLTKVGRRLYTVRHRESGVERSIVCQIDTVEGSKKVTIRSPVQIRNHFSVPLSVYEGDTLLGTASPEN
EFNIPLGSYRSFIFLKPEDENYQMCEGIDFEEIIKNDGALLKKKCRSKNPSKESFLINIVPEKDNLTSLSVYSEDGWDLPYIMHLWPPIL
LRNLLPYKIAYYIEGIENSVFTLSEGHSAQICTAQLGKARLHLKLLDYLNHDWKSEYHIKPNQQDISFVSFTCVTEMEKTDLDIAVHMTY
NTGQTVVAFHSPYWMVNKTGRMLQYKADGIHRKHPPNYKKPVLFSFQPNHFFNNNKVQLMVTDSELSNQFSIDTVGSHGAVKCKGLKMDY
QVGVTIDLSSFNITRIVTFTPFYMIKNKSKYHISVAEEGNDKWLSLDLEQCIPFWPEYASSKLLIQVERSEDPPKRIYFNKQENCILLRL
DNELGGIIAEVNLAEHSTVITFLDYHDGAATFLLINHTKNELVQYNQSSLSEIEDSLPPGKAVFYTWADPVGSRRLKWRCRKSHGEVTQK
DDMMMPIDLGEKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAEQEIAVALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKK
KARWKPMSVKHTEKLEREFKEYTESSPSEDKVIQLDTNVPVRLTPTGHNMKILQPHVIALRRNYLPALKVEYNTSAHQSSFRIQIYRIQI
QNQIHGAVFPFVFYPVKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLRLDLGFIYALTDLMTEAEVTENTEVELFH
KDIEAFKEEYKTASLVDQSQVSLYEYFHISPIKLHLSVSLSSGREEAKDSKQNGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNY
QFHTTSDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAAS
KITGAMAKGVAAMTMDEDYQQKRREAMNKQPAGFREGITRGGKGLVSGFVSGITGIVTKPIKGAQKGGAAGFFKGVGKGLVGAVARPTGG
IIDMASSTFQGIKRATETSEVESLRPPRFFNEDGVIRPYRLRDGTGNQMLQVMENGRFAKYKYFTHVMINKTDMLMITRRGVLFVTKGTF

--------------------------------------------------------------
>In-frame_ENST00000281453_ENST00000357409_TCGA-IN-8462-11A_MLF1IP_chr4_185637551_-_VPS13A_chr9_79910458_length(transcript)=6978nt_BP=689nt
CGGATTGGCTGTTCGGAGCGGCGAGGGGCTTGGCGGGAGCTTCCAGTCGCTCGAGAGCGGAGAGCGGCACCATGGCCCCGCGGGGGCGGC
GGCGGCCGCGGCCTCACAGGTCTGAGGGCGCAAGACGTTCAAAGAACACTTTAGAAAGAACACATTCCATGAAAGATAAAGCTGGTCAAA
AGTGCAAGCCTATTGACGTGTTCGACTTTCCTGATAATTCTGATGTCTCAAGCATTGGCAGGCTGGGTGAAAATGAGAAAGATGAAGAAA
CTTATGAGACCTTTGATCCTCCTTTACATAGCACAGCTATATATGCTGATGAAGAAGAATTCTCCAAACATTGTGGACTGTCTCTCTCTT
CAACTCCTCCAGGAAAAGAAGCAAAAAGAAGTTCAGACACTTCTGGAAATGAAGCAAGTGAAATCGAATCTGTAAAAATTAGTGCAAAAA
AGCCAGGAAGAAAGCTCAGGCCCATTAGTGATGACTCTGAAAGCATTGAAGAAAGTGATACAAGGAGAAAAGTTAAATCAGCAGAGAAAA
TAAGTACACAACGTCATGAGGTTATTCGAACCACAGCGTCTTCAGAACTTTCAGAGAAACCAGCTGAGTCTGTCACTTCTAAAAAGACAG
GACCCCTTAGTGCCCAGCCCTCTGTTGAAAAAGAGAACTTGGCAATAGAAAGTCAATCGGCTTTTATAGATAATTTTCAGGCAGCTAAAC
AAGCCTTGGCTGAGGCAACTGTTCAGGCAGCTGGAATGGCTGCTACTGGTGTAAAAGAACTCGCACAAAGGAGTTCCAGAATGGCACTGG
ATATTAACATCAAAGCCCCAGTTGTGGTCATCCCGCAGTCTCCAGTTTCTGAAAATGTTTTTGTTGCTGATTTTGGACTAATTACAATGA
CAAATACCTTTCATATGATAACAGAGAGCCAGAGCTCTCCCCCACCTGTTATTGATTTGATAACAATAAAGCTGAGTGAAATGCGACTAT
ACAGATCTCGATTTATTAATGATGCATACCAGGAAGTACTGGATCTACTCCTGCCATTAAATCTTGAGGTTGTGGTTGAACGAAATTTAT
GCTGGGAGTGGTACCAGGAAGTTCCTTGTTTTAATGTAAATGCTCAGCTGAAACCAATGGAGTTCATTCTTAGTCAAGAAGATATAACAA
CTATTTTTAAAACATTGCATGGCAATATATGGTATGAAAAAGATGGTAGTGCCTCACCTGCTGTAACAAAAGACCAATACAGTGCCACTA
GTGGAGTTACTACTAATGCTTCACACCATTCAGGAGGAGCAACTGTGGTGACAGCTGCTGTGGTAGAAGTACATTCACGTGCCTTACTAG
TTAAGACAACACTAAACATAAGCTTCAAAACTGATGATCTCACCATGGTGCTGTATAGTCCAGGTCCTAAACAGGCTTCCTTTACAGATG
TTCGTGATCCTTCTCTGAAACTTGCTGAATTTAAATTGGAGAATATTATAAGTACTTTAAAAATGTATACAGATGGCTCAACATTTTCTT
CCTTCTCATTAAAAAACTGTATTTTAGATGATAAAAGACCTCATGTCAAGAAAGCAACTCCTCGAATGATAGGACTGACAGTTGGTTTTG
ACAAAAAAGACATGATGGATATAAAGTACAGGAAAGTCAGAGATGGTTGTGTGACTGATGCGGTCTTTCAAGAAATGTATATTTGTGCAA
GCGTAGAATTTCTGCAGACTGTTGCAAATGTCTTTCTTGAGGCCTACACCACAGGCACTGCTGTAGAAACCAGTGTGCAAACATGGACTG
CTAAGGAAGAAGTACCTACACAGGAATCAGTGAAGTGGGAAATTAATGTTATTATTAAAAATCCTGAAATTGTGTTTGTAGCTGACATGA
CAAAAAATGATGCTCCTGCTTTAGTCATTACAACACAATGTGAAATTTGCTATAAAGGTAACCTTGAAAATAGTACAATGACTGCTGCCA
TTAAAGATCTCCAAGTGAGAGCCTGCCCGTTTCTTCCAGTCAAGAGAAAAGGCAAAATCACTACTGTTTTGCAGCCCTGTGACTTGTTTT
ATCAAACTACTCAGAAAGGTACAGATCCACAAGTGATCGATATGTCAGTAAAATCCCTGACACTAAAGGTTTCACCAGTTATTATAAATA
CTATGATTACCATAACTTCAGCACTGTATACAACTAAGGAAACCATCCCAGAAGAAACGGCTTCTTCTACTGCACATTTATGGGAAAAGA
AGGATACAAAGACTTTAAAAATGTGGTTTCTTGAAGAATCAAATGAAACTGAAAAAATAGCTCCCACAACTGAATTGGTACCCAAAGGCG
AGATGATAAAAATGAACATTGATTCTATTTTTATAGTTCTTGAGGCTGGAATTGGTCATAGAACAGTACCTATGCTTCTGGCAAAGTCAC
GTTTTTCAGGGGAAGGCAAAAACTGGAGTTCCCTAATAAATCTGCACTGTCAGCTTGAGCTAGAAGTGCATTATTATAATGAAATGTTTG
GTGTATGGGAGCCTTTGCTTGAACCCTTAGAAATTGATCAGACTGAGGATTTTAGACCATGGAATCTTGGTATCAAGATGAAAAAGAAAG
CAAAAATGGCCATTGTTGAGTCAGATCCTGAAGAAGAAAACTACAAAGTGCCAGAATATAAAACTGTCATCAGTTTCCATTCAAAAGACC
AATTAAACATTACATTATCCAAATGTGGTCTTGTAATGTTAAACAATTTAGTCAAGGCATTTACAGAAGCTGCCACTGGATCTTCAGCTG
ACTTCGTAAAGGATCTAGCACCATTTATGATTTTAAATTCCCTTGGACTTACTATTTCTGTTTCGCCAAGTGATTCTTTTAGTGTACTCA
ACATTCCTATGGCAAAATCATATGTATTGAAAAATGGAGAAAGTTTAAGTATGGATTATATCCGAACCAAGGACAATGATCATTTCAATG
CAATGACCAGCCTAAGCAGCAAACTCTTCTTCATTCTTCTTACACCTGTTAACCATTCTACTGCTGATAAGATTCCTTTAACAAAAGTGG
GACGACGTCTGTACACTGTAAGACACAGAGAGTCTGGCGTTGAAAGATCTATTGTTTGTCAAATTGATACAGTAGAAGGAAGTAAGAAGG
TCACAATTCGCTCCCCAGTGCAGATAAGAAATCATTTTTCAGTCCCACTGTCTGTTTACGAAGGGGATACCTTATTGGGAACTGCCTCAC
CTGAAAATGAATTCAACATACCATTAGGATCTTACCGATCATTCATTTTTCTGAAGCCAGAAGATGAGAACTATCAAATGTGTGAAGGAA
TTGACTTTGAAGAGATTATAAAAAATGATGGTGCTCTTCTAAAGAAGAAATGTAGATCTAAAAACCCTTCTAAGGAATCATTTCTCATTA
ATATTGTTCCAGAAAAAGATAATTTAACATCTCTATCAGTGTATTCAGAAGATGGTTGGGATTTACCATACATAATGCATTTGTGGCCAC
CTATCCTGCTCCGAAATCTTCTTCCTTACAAAATTGCTTATTATATAGAGGGAATTGAAAATTCGGTTTTTACTCTAAGTGAAGGACATT
CAGCCCAGATTTGTACTGCACAGTTGGGTAAAGCCAGGCTACATTTAAAATTACTTGACTATCTCAATCACGATTGGAAAAGTGAATATC
ACATAAAGCCTAATCAGCAAGACATTAGTTTTGTCAGTTTTACTTGTGTTACAGAAATGGAAAAGACTGATTTAGATATTGCTGTCCATA
TGACTTACAATACTGGTCAGACAGTTGTGGCATTTCATAGTCCTTATTGGATGGTCAATAAAACTGGCCGCATGTTACAGTACAAAGCAG
ACGGAATTCATCGAAAGCATCCACCTAATTATAAAAAGCCAGTTCTCTTTTCTTTTCAGCCAAATCACTTTTTTAATAACAATAAGGTTC
AACTTATGGTAACTGATAGTGAGTTGTCCAATCAGTTTTCAATTGATACTGTTGGTAGTCATGGAGCTGTTAAATGTAAAGGCCTGAAAA
TGGACTATCAAGTTGGTGTCACTATAGACCTGAGCAGTTTTAACATTACTAGAATTGTGACATTTACCCCTTTTTATATGATTAAAAACA
AAAGCAAATACCATATATCAGTGGCTGAAGAAGGAAATGATAAATGGCTCTCTCTTGATTTGGAGCAGTGTATCCCCTTTTGGCCTGAGT
ATGCTTCTAGTAAACTTCTTATTCAAGTCGAAAGGAGTGAAGATCCTCCCAAAAGGATATATTTTAACAAGCAGGAAAATTGTATTCTAT
TGCGTCTAGATAACGAGCTTGGAGGTATTATAGCAGAAGTGAATTTGGCCGAGCATTCTACAGTTATTACATTTTTAGATTATCATGATG
GAGCAGCTACATTCCTCTTAATAAATCACACAAAGAATGAACTTGTTCAATACAATCAAAGTTCTCTCAGTGAAATAGAAGATTCCCTCC
CTCCTGGTAAAGCCGTGTTTTATACATGGGCTGATCCGGTGGGCTCTAGAAGGCTGAAGTGGAGATGTAGAAAAAGCCATGGTGAAGTAA
CACAGAAGGATGATATGATGATGCCTATAGATTTGGGGGAAAAGACAATATATTTAGTTTCATTCTTTGAAGGTTTACAACGCATTATTT
TATTCACTGAAGATCCAAGGGTATTTAAAGTAACATATGAAAGTGAGAAAGCAGAGTTAGCAGAGCAAGAAATTGCAGTGGCATTACAAG
ATGTTGGAATTTCTCTTGTCAACAATTACACGAAGCAAGAAGTAGCCTATATAGGCATTACAAGTTCTGATGTGGTTTGGGAAACAAAGC
CCAAGAAGAAGGCAAGATGGAAGCCAATGAGTGTAAAGCACACTGAGAAGTTAGAGAGAGAATTTAAGGAATATACTGAATCTTCTCCTT
CAGAAGATAAGGTTATTCAGTTGGACACTAATGTTCCGGTTCGCCTAACCCCTACTGGTCATAACATGAAAATTCTGCAGCCGCATGTAA
TAGCTCTACGAAGAAATTATCTTCCAGCATTAAAAGTGGAATATAACACATCTGCACATCAATCATCATTTAGAATTCAGATTTACAGAA
TACAGATCCAAAATCAGATACATGGTGCTGTATTTCCCTTTGTGTTTTATCCTGTTAAACCTCCAAAGTCGGTCACCATGGATTCAGCAC
CAAAGCCCTTTACAGATGTCAGTATTGTCATGAGATCTGCAGGACATTCCCAGATATCACGTATTAAGTATTTCAAAGTATTGATTCAAG
AAATGGATCTCAGGTTAGATCTTGGGTTTATCTATGCTTTAACAGACCTTATGACAGAAGCTGAGGTGACTGAAAATACAGAGGTTGAGC
TTTTTCATAAAGATATAGAAGCTTTCAAAGAAGAATATAAAACAGCCTCATTAGTAGATCAATCACAAGTCAGCCTCTATGAATATTTTC
ATATATCTCCTATCAAGTTACATTTAAGTGTTTCACTGAGTTCCGGCAGAGAAGAAGCTAAAGATTCAAAACAAAATGGAGGACTGATTC
CAGTTCATTCTTTAAATCTTTTGCTGAAGAGTATTGGTGCCACACTGACAGATGTACAAGATGTAGTTTTTAAGCTTGCATTTTTTGAAC
TCAACTATCAGTTCCATACAACATCCGATCTACAGTCTGAAGTCATAAGACACTATTCAAAACAGGCCATTAAGCAGATGTATGTACTCA
TTCTTGGACTTGATGTTTTGGGAAATCCATTTGGCTTAATTAGAGAATTTTCTGAAGGTGTAGAAGCATTTTTTTATGAACCTTACCAGG
GAGCCATCCAGGGTCCTGAAGAGTTTGTGGAAGGAATGGCACTAGGACTTAAGGCACTAGTTGGTGGAGCTGTTGGTGGATTGGCTGGTG
CTGCCTCCAAAATCACCGGTGCTATGGCTAAGGGGGTAGCAGCTATGACCATGGATGAAGACTACCAACAGAAGAGAAGAGAAGCCATGA
ATAAGCAACCAGCTGGTTTTAGAGAAGGCATCACTCGTGGAGGAAAAGGCTTAGTTTCTGGATTTGTTAGTGGCATAACAGGAATTGTTA
CAAAACCAATCAAAGGAGCTCAAAAAGGAGGAGCAGCTGGTTTCTTTAAAGGTGTTGGGAAAGGTTTAGTAGGAGCGGTAGCAAGGCCAA
CTGGAGGCATCATAGACATGGCTAGCAGTACATTTCAGGGAATAAAAAGAGCTACAGAGACTTCTGAAGTGGAGAGTCTGCGACCTCCTC
GGTTCTTCAATGAAGATGGAGTTATCAGACCGTACAGGTTGAGGGATGGGACTGGAAATCAAATGTTACAGAAAATTCAATTCTACAGGG
AGTGGATTATGACTCACAGTAGCAGTAGTGATGATGATGATGATGATGATGATGATGATGAGTCAGATCTAAACCATTAAAATTCATATG
TTCTTTATTTTACTTGGAATGTTTCATTAACATGTTTTGTATGACTTATACCATAATGCCCATATGTCCATTTATAGGGAGGTAAAACAC
ATTTTCTTTTAAAATGTTTTCCTACACATTTTCATAAAGCAAAATAATTGTATTATTTAAGCACAGAAAAAAATGTATCTTACATCCAAA
GTAGGGAGGGCATCCAACATATTATAGATTTGCTTTTATATATTTTATAGCTTTGTATTGCATAGTTTGTCTTTAAGAGTTCAAGTTAGA
CTTAAATATAATTTTGATGTTCACTGGTTTTATTTTAAATTGCCTTCTTATTTGTTAGCAAAATGCCTTTTTTTAATGGTCTCTGTAAAT
TTTCTGGGCTTTAATGTAATGCCACTGTGTAAAAAAAAAGGAAGAAAATAGTAATAGCCATTTAATGTTTTATATTTATCATTTTAAAGA

>In-frame_ENST00000281453_ENST00000357409_TCGA-IN-8462-11A_MLF1IP_chr4_185637551_-_VPS13A_chr9_79910458_length(amino acids)=2153AA_start in transcript=8_stop in transcript=6469
MFGAARGLAGASSRSRAESGTMAPRGRRRPRPHRSEGARRSKNTLERTHSMKDKAGQKCKPIDVFDFPDNSDVSSIGRLGENEKDEETYE
TFDPPLHSTAIYADEEEFSKHCGLSLSSTPPGKEAKRSSDTSGNEASEIESVKISAKKPGRKLRPISDDSESIEESDTRRKVKSAEKIST
QRHEVIRTTASSELSEKPAESVTSKKTGPLSAQPSVEKENLAIESQSAFIDNFQAAKQALAEATVQAAGMAATGVKELAQRSSRMALDIN
IKAPVVVIPQSPVSENVFVADFGLITMTNTFHMITESQSSPPPVIDLITIKLSEMRLYRSRFINDAYQEVLDLLLPLNLEVVVERNLCWE
WYQEVPCFNVNAQLKPMEFILSQEDITTIFKTLHGNIWYEKDGSASPAVTKDQYSATSGVTTNASHHSGGATVVTAAVVEVHSRALLVKT
TLNISFKTDDLTMVLYSPGPKQASFTDVRDPSLKLAEFKLENIISTLKMYTDGSTFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKK
DMMDIKYRKVRDGCVTDAVFQEMYICASVEFLQTVANVFLEAYTTGTAVETSVQTWTAKEEVPTQESVKWEINVIIKNPEIVFVADMTKN
DAPALVITTQCEICYKGNLENSTMTAAIKDLQVRACPFLPVKRKGKITTVLQPCDLFYQTTQKGTDPQVIDMSVKSLTLKVSPVIINTMI
TITSALYTTKETIPEETASSTAHLWEKKDTKTLKMWFLEESNETEKIAPTTELVPKGEMIKMNIDSIFIVLEAGIGHRTVPMLLAKSRFS
GEGKNWSSLINLHCQLELEVHYYNEMFGVWEPLLEPLEIDQTEDFRPWNLGIKMKKKAKMAIVESDPEEENYKVPEYKTVISFHSKDQLN
ITLSKCGLVMLNNLVKAFTEAATGSSADFVKDLAPFMILNSLGLTISVSPSDSFSVLNIPMAKSYVLKNGESLSMDYIRTKDNDHFNAMT
SLSSKLFFILLTPVNHSTADKIPLTKVGRRLYTVRHRESGVERSIVCQIDTVEGSKKVTIRSPVQIRNHFSVPLSVYEGDTLLGTASPEN
EFNIPLGSYRSFIFLKPEDENYQMCEGIDFEEIIKNDGALLKKKCRSKNPSKESFLINIVPEKDNLTSLSVYSEDGWDLPYIMHLWPPIL
LRNLLPYKIAYYIEGIENSVFTLSEGHSAQICTAQLGKARLHLKLLDYLNHDWKSEYHIKPNQQDISFVSFTCVTEMEKTDLDIAVHMTY
NTGQTVVAFHSPYWMVNKTGRMLQYKADGIHRKHPPNYKKPVLFSFQPNHFFNNNKVQLMVTDSELSNQFSIDTVGSHGAVKCKGLKMDY
QVGVTIDLSSFNITRIVTFTPFYMIKNKSKYHISVAEEGNDKWLSLDLEQCIPFWPEYASSKLLIQVERSEDPPKRIYFNKQENCILLRL
DNELGGIIAEVNLAEHSTVITFLDYHDGAATFLLINHTKNELVQYNQSSLSEIEDSLPPGKAVFYTWADPVGSRRLKWRCRKSHGEVTQK
DDMMMPIDLGEKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAEQEIAVALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKK
KARWKPMSVKHTEKLEREFKEYTESSPSEDKVIQLDTNVPVRLTPTGHNMKILQPHVIALRRNYLPALKVEYNTSAHQSSFRIQIYRIQI
QNQIHGAVFPFVFYPVKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLRLDLGFIYALTDLMTEAEVTENTEVELFH
KDIEAFKEEYKTASLVDQSQVSLYEYFHISPIKLHLSVSLSSGREEAKDSKQNGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNY
QFHTTSDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAAS
KITGAMAKGVAAMTMDEDYQQKRREAMNKQPAGFREGITRGGKGLVSGFVSGITGIVTKPIKGAQKGGAAGFFKGVGKGLVGAVARPTGG

--------------------------------------------------------------
>In-frame_ENST00000541971_ENST00000376634_TCGA-IN-8462-11A_MLF1IP_chr4_185637551_-_VPS13A_chr9_79910458_length(transcript)=7028nt_BP=618nt
ATGGCCCCGCGGGGGCGGCGGCGGCCGCGGCCTCACAGGTCTGAGGGCGCAAGACGTTCAAAGAACACTTTAGAAAGAACACATTCCATG
AAAGATAAAGCTGGTCAAAAGTGCAAGCCTATTGACGTGTTCGACTTTCCTGATAATTCTGATGTCTCAAGCATTGGCAGGCTGGGTGAA
AATGAGAAAGATGAAGAAACTTATGAGACCTTTGATCCTCCTTTACATAGCACAGCTATATATGCTGATGAAGAAGAATTCTCCAAACAT
TGTGGACTGTCTCTCTCTTCAACTCCTCCAGGAAAAGAAGCAAAAAGAAGTTCAGACACTTCTGGAAATGAAGCAAGTGAAATCGAATCT
GTAAAAATTAGTGCAAAAAAGCCAGGAAGAAAGCTCAGGCCCATTAGTGATGACTCTGAAAGCATTGAAGAAAGTGATACAAGGAGAAAA
GTTAAATCAGCAGAGAAAATAAGTACACAACGTCATGAGGTTATTCGAACCACAGCGTCTTCAGAACTTTCAGAGAAACCAGCTGAGTCT
GTCACTTCTAAAAAGACAGGACCCCTTAGTGCCCAGCCCTCTGTTGAAAAAGAGAACTTGGCAATAGAAAGTCAATCGGCTTTTATAGAT
AATTTTCAGGCAGCTAAACAAGCCTTGGCTGAGGCAACTGTTCAGGCAGCTGGAATGGCTGCTACTGGTGTAAAAGAACTCGCACAAAGG
AGTTCCAGAATGGCACTGGATATTAACATCAAAGCCCCAGTTGTGGTCATCCCGCAGTCTCCAGTTTCTGAAAATGTTTTTGTTGCTGAT
TTTGGACTAATTACAATGACAAATACCTTTCATATGATAACAGAGAGCCAGAGCTCTCCCCCACCTGTTATTGATTTGATAACAATAAAG
CTGAGTGAAATGCGACTATACAGATCTCGATTTATTAATGATGCATACCAGGAAGTACTGGATCTACTCCTGCCATTAAATCTTGAGGTT
GTGGTTGAACGAAATTTATGCTGGGAGTGGTACCAGGAAGTTCCTTGTTTTAATGTAAATGCTCAGCTGAAACCAATGGAGTTCATTCTT
AGTCAAGAAGATATAACAACTATTTTTAAAACATTGCATGGCAATATATGGTATGAAAAAGATGGTAGTGCCTCACCTGCTGTAACAAAA
GACCAATACAGTGCCACTAGTGGAGTTACTACTAATGCTTCACACCATTCAGGAGGAGCAACTGTGGTGACAGCTGCTGTGGTAGAAGTA
CATTCACGTGCCTTACTAGTTAAGACAACACTAAACATAAGCTTCAAAACTGATGATCTCACCATGGTGCTGTATAGTCCAGGTCCTAAA
CAGGCTTCCTTTACAGATGTTCGTGATCCTTCTCTGAAACTTGCTGAATTTAAATTGGAGAATATTATAAGTACTTTAAAAATGTATACA
GATGGCTCAACATTTTCTTCCTTCTCATTAAAAAACTGTATTTTAGATGATAAAAGACCTCATGTCAAGAAAGCAACTCCTCGAATGATA
GGACTGACAGTTGGTTTTGACAAAAAAGACATGATGGATATAAAGTACAGGAAAGTCAGAGATGGTTGTGTGACTGATGCGGTCTTTCAA
GAAATGTATATTTGTGCAAGCGTAGAATTTCTGCAGACTGTTGCAAATGTCTTTCTTGAGGCCTACACCACAGGCACTGCTGTAGAAACC
AGTGTGCAAACATGGACTGCTAAGGAAGAAGTACCTACACAGGAATCAGTGAAGTGGGAAATTAATGTTATTATTAAAAATCCTGAAATT
GTGTTTGTAGCTGACATGACAAAAAATGATGCTCCTGCTTTAGTCATTACAACACAATGTGAAATTTGCTATAAAGGTAACCTTGAAAAT
AGTACAATGACTGCTGCCATTAAAGATCTCCAAGTGAGAGCCTGCCCGTTTCTTCCAGTCAAGAGAAAAGGCAAAATCACTACTGTTTTG
CAGCCCTGTGACTTGTTTTATCAAACTACTCAGAAAGGTACAGATCCACAAGTGATCGATATGTCAGTAAAATCCCTGACACTAAAGGTT
TCACCAGTTATTATAAATACTATGATTACCATAACTTCAGCACTGTATACAACTAAGGAAACCATCCCAGAAGAAACGGCTTCTTCTACT
GCACATTTATGGGAAAAGAAGGATACAAAGACTTTAAAAATGTGGTTTCTTGAAGAATCAAATGAAACTGAAAAAATAGCTCCCACAACT
GAATTGGTACCCAAAGGCGAGATGATAAAAATGAACATTGATTCTATTTTTATAGTTCTTGAGGCTGGAATTGGTCATAGAACAGTACCT
ATGCTTCTGGCAAAGTCACGTTTTTCAGGGGAAGGCAAAAACTGGAGTTCCCTAATAAATCTGCACTGTCAGCTTGAGCTAGAAGTGCAT
TATTATAATGAAATGTTTGGTGTATGGGAGCCTTTGCTTGAACCCTTAGAAATTGATCAGACTGAGGATTTTAGACCATGGAATCTTGGT
ATCAAGATGAAAAAGAAAGCAAAAATGGCCATTGTTGAGTCAGATCCTGAAGAAGAAAACTACAAAGTGCCAGAATATAAAACTGTCATC
AGTTTCCATTCAAAAGACCAATTAAACATTACATTATCCAAATGTGGTCTTGTAATGTTAAACAATTTAGTCAAGGCATTTACAGAAGCT
GCCACTGGATCTTCAGCTGACTTCGTAAAGGATCTAGCACCATTTATGATTTTAAATTCCCTTGGACTTACTATTTCTGTTTCGCCAAGT
GATTCTTTTAGTGTACTCAACATTCCTATGGCAAAATCATATGTATTGAAAAATGGAGAAAGTTTAAGTATGGATTATATCCGAACCAAG
GACAATGATCATTTCAATGCAATGACCAGCCTAAGCAGCAAACTCTTCTTCATTCTTCTTACACCTGTTAACCATTCTACTGCTGATAAG
ATTCCTTTAACAAAAGTGGGACGACGTCTGTACACTGTAAGACACAGAGAGTCTGGCGTTGAAAGATCTATTGTTTGTCAAATTGATACA
GTAGAAGGAAGTAAGAAGGTCACAATTCGCTCCCCAGTGCAGATAAGAAATCATTTTTCAGTCCCACTGTCTGTTTACGAAGGGGATACC
TTATTGGGAACTGCCTCACCTGAAAATGAATTCAACATACCATTAGGATCTTACCGATCATTCATTTTTCTGAAGCCAGAAGATGAGAAC
TATCAAATGTGTGAAGGAATTGACTTTGAAGAGATTATAAAAAATGATGGTGCTCTTCTAAAGAAGAAATGTAGATCTAAAAACCCTTCT
AAGGAATCATTTCTCATTAATATTGTTCCAGAAAAAGATAATTTAACATCTCTATCAGTGTATTCAGAAGATGGTTGGGATTTACCATAC
ATAATGCATTTGTGGCCACCTATCCTGCTCCGAAATCTTCTTCCTTACAAAATTGCTTATTATATAGAGGGAATTGAAAATTCGGTTTTT
ACTCTAAGTGAAGGACATTCAGCCCAGATTTGTACTGCACAGTTGGGTAAAGCCAGGCTACATTTAAAATTACTTGACTATCTCAATCAC
GATTGGAAAAGTGAATATCACATAAAGCCTAATCAGCAAGACATTAGTTTTGTCAGTTTTACTTGTGTTACAGAAATGGAAAAGACTGAT
TTAGATATTGCTGTCCATATGACTTACAATACTGGTCAGACAGTTGTGGCATTTCATAGTCCTTATTGGATGGTCAATAAAACTGGCCGC
ATGTTACAGTACAAAGCAGACGGAATTCATCGAAAGCATCCACCTAATTATAAAAAGCCAGTTCTCTTTTCTTTTCAGCCAAATCACTTT
TTTAATAACAATAAGGTTCAACTTATGGTAACTGATAGTGAGTTGTCCAATCAGTTTTCAATTGATACTGTTGGTAGTCATGGAGCTGTT
AAATGTAAAGGCCTGAAAATGGACTATCAAGTTGGTGTCACTATAGACCTGAGCAGTTTTAACATTACTAGAATTGTGACATTTACCCCT
TTTTATATGATTAAAAACAAAAGCAAATACCATATATCAGTGGCTGAAGAAGGAAATGATAAATGGCTCTCTCTTGATTTGGAGCAGTGT
ATCCCCTTTTGGCCTGAGTATGCTTCTAGTAAACTTCTTATTCAAGTCGAAAGGAGTGAAGATCCTCCCAAAAGGATATATTTTAACAAG
CAGGAAAATTGTATTCTATTGCGTCTAGATAACGAGCTTGGAGGTATTATAGCAGAAGTGAATTTGGCCGAGCATTCTACAGTTATTACA
TTTTTAGATTATCATGATGGAGCAGCTACATTCCTCTTAATAAATCACACAAAGAATGAACTTGTTCAATACAATCAAAGTTCTCTCAGT
GAAATAGAAGATTCCCTCCCTCCTGGTAAAGCCGTGTTTTATACATGGGCTGATCCGGTGGGCTCTAGAAGGCTGAAGTGGAGATGTAGA
AAAAGCCATGGTGAAGTAACACAGAAGGATGATATGATGATGCCTATAGATTTGGGGGAAAAGACAATATATTTAGTTTCATTCTTTGAA
GGTTTACAACGCATTATTTTATTCACTGAAGATCCAAGGGTATTTAAAGTAACATATGAAAGTGAGAAAGCAGAGTTAGCAGAGCAAGAA
ATTGCAGTGGCATTACAAGATGTTGGAATTTCTCTTGTCAACAATTACACGAAGCAAGAAGTAGCCTATATAGGCATTACAAGTTCTGAT
GTGGTTTGGGAAACAAAGCCCAAGAAGAAGGCAAGATGGAAGCCAATGAGTGTAAAGCACACTGAGAAGTTAGAGAGAGAATTTAAGGAA
TATACTGAATCTTCTCCTTCAGAAGATAAGGTTATTCAGTTGGACACTAATGTTCCGGTTCGCCTAACCCCTACTGGTCATAACATGAAA
ATTCTGCAGCCGCATGTAATAGCTCTACGAAGAAATTATCTTCCAGCATTAAAAGTGGAATATAACACATCTGCACATCAATCATCATTT
AGAATTCAGATTTACAGAATACAGATCCAAAATCAGATACATGGTGCTGTATTTCCCTTTGTGTTTTATCCTGTTAAACCTCCAAAGTCG
GTCACCATGGATTCAGCACCAAAGCCCTTTACAGATGTCAGTATTGTCATGAGATCTGCAGGACATTCCCAGATATCACGTATTAAGTAT
TTCAAAGTATTGATTCAAGAAATGGATCTCAGGTTAGATCTTGGGTTTATCTATGCTTTAACAGACCTTATGACAGAAGCTGAGGTGACT
GAAAATACAGAGGTTGAGCTTTTTCATAAAGATATAGAAGCTTTCAAAGAAGAATATAAAACAGCCTCATTAGTAGATCAATCACAAGTC
AGCCTCTATGAATATTTTCATATATCTCCTATCAAGTTACATTTAAGTGTTTCACTGAGTTCCGGCAGAGAAGAAGCTAAAGATTCAAAA
CAAAATGGAGGACTGATTCCAGTTCATTCTTTAAATCTTTTGCTGAAGAGTATTGGTGCCACACTGACAGATGTACAAGATGTAGTTTTT
AAGCTTGCATTTTTTGAACTCAACTATCAGTTCCATACAACATCCGATCTACAGTCTGAAGTCATAAGACACTATTCAAAACAGGCCATT
AAGCAGATGTATGTACTCATTCTTGGACTTGATGTTTTGGGAAATCCATTTGGCTTAATTAGAGAATTTTCTGAAGGTGTAGAAGCATTT
TTTTATGAACCTTACCAGGGAGCCATCCAGGGTCCTGAAGAGTTTGTGGAAGGAATGGCACTAGGACTTAAGGCACTAGTTGGTGGAGCT
GTTGGTGGATTGGCTGGTGCTGCCTCCAAAATCACCGGTGCTATGGCTAAGGGGGTAGCAGCTATGACCATGGATGAAGACTACCAACAG
AAGAGAAGAGAAGCCATGAATAAGCAACCAGCTGGTTTTAGAGAAGGCATCACTCGTGGAGGAAAAGGCTTAGTTTCTGGATTTGTTAGT
GGCATAACAGGAATTGTTACAAAACCAATCAAAGGAGCTCAAAAAGGAGGAGCAGCTGGTTTCTTTAAAGGTGTTGGGAAAGGTTTAGTA
GGAGCGGTAGCAAGGCCAACTGGAGGCATCATAGACATGGCTAGCAGTACATTTCAGGGAATAAAAAGAGCTACAGAGACTTCTGAAGTG
GAGAGTCTGCGACCTCCTCGGTTCTTCAATGAAGATGGAGTTATCAGACCGTACAGGTTGAGGGATGGGACTGGAAATCAAATGTTACAG
GCATCAAAAAGTTTGATATGAAAAGTTAATGCATGACTTTGCAAGTGAAAGCCAACAGTAGATTTTAGTCTTAAAATTTACAAACTACGT
ACAGCTGTTTCAGTATTTTGAATACAAAGAAAACCTTTTGTATTGGTAACTTTTAATAGGAATTTTAATGAATCTGGTTTTTTTATAGGG
TGTTCTTAGTTCTGCACTGGATTTGCTAGATTTGTTGGAAGCCTTTGTACCTTATGTATCCTCGTCATTGGTGGTACTTACTTAACCAAT
TAAACCATTTCTGTTGTGGGGTTATTAAACCACTGGTAGCTTTTATACCAGATATATAATCCTTATATCCAATTACACATGAAGAAGGAA
AAGCAAAACTCAGGAACACTGCTATTGTGAATTACTCTTGGATTCTTGTGCTTTGCCTTTGAAAATGCTTAAATGGCCATGACCCTCTTC
CTGCTTTATTCTAGTGTAGTCTTTATAAAACTTGTGGGATTTGATAAGCAGTTCACATGCAAACCAGTATCTTTTAATAATACAAAGTAG
CATCTGGAACAATAGACAGTTTGAAGTTAGAATCTGCTTAGACAACTTTCTTACTTGGTAAATTCGACTTTTTAAAACCTGGATTATGCT
GTAGGTAACTAGTAATCATATATAGGCTATACCAGTGTCATGTTGTTTCTGTGGTTTAGAGGTGGAATACTAAATTAAATCATTTGTTTG

>In-frame_ENST00000541971_ENST00000376634_TCGA-IN-8462-11A_MLF1IP_chr4_185637551_-_VPS13A_chr9_79910458_length(amino acids)=2106AA_start in transcript=0_stop in transcript=6320
MAPRGRRRPRPHRSEGARRSKNTLERTHSMKDKAGQKCKPIDVFDFPDNSDVSSIGRLGENEKDEETYETFDPPLHSTAIYADEEEFSKH
CGLSLSSTPPGKEAKRSSDTSGNEASEIESVKISAKKPGRKLRPISDDSESIEESDTRRKVKSAEKISTQRHEVIRTTASSELSEKPAES
VTSKKTGPLSAQPSVEKENLAIESQSAFIDNFQAAKQALAEATVQAAGMAATGVKELAQRSSRMALDINIKAPVVVIPQSPVSENVFVAD
FGLITMTNTFHMITESQSSPPPVIDLITIKLSEMRLYRSRFINDAYQEVLDLLLPLNLEVVVERNLCWEWYQEVPCFNVNAQLKPMEFIL
SQEDITTIFKTLHGNIWYEKDGSASPAVTKDQYSATSGVTTNASHHSGGATVVTAAVVEVHSRALLVKTTLNISFKTDDLTMVLYSPGPK
QASFTDVRDPSLKLAEFKLENIISTLKMYTDGSTFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMMDIKYRKVRDGCVTDAVFQ
EMYICASVEFLQTVANVFLEAYTTGTAVETSVQTWTAKEEVPTQESVKWEINVIIKNPEIVFVADMTKNDAPALVITTQCEICYKGNLEN
STMTAAIKDLQVRACPFLPVKRKGKITTVLQPCDLFYQTTQKGTDPQVIDMSVKSLTLKVSPVIINTMITITSALYTTKETIPEETASST
AHLWEKKDTKTLKMWFLEESNETEKIAPTTELVPKGEMIKMNIDSIFIVLEAGIGHRTVPMLLAKSRFSGEGKNWSSLINLHCQLELEVH
YYNEMFGVWEPLLEPLEIDQTEDFRPWNLGIKMKKKAKMAIVESDPEEENYKVPEYKTVISFHSKDQLNITLSKCGLVMLNNLVKAFTEA
ATGSSADFVKDLAPFMILNSLGLTISVSPSDSFSVLNIPMAKSYVLKNGESLSMDYIRTKDNDHFNAMTSLSSKLFFILLTPVNHSTADK
IPLTKVGRRLYTVRHRESGVERSIVCQIDTVEGSKKVTIRSPVQIRNHFSVPLSVYEGDTLLGTASPENEFNIPLGSYRSFIFLKPEDEN
YQMCEGIDFEEIIKNDGALLKKKCRSKNPSKESFLINIVPEKDNLTSLSVYSEDGWDLPYIMHLWPPILLRNLLPYKIAYYIEGIENSVF
TLSEGHSAQICTAQLGKARLHLKLLDYLNHDWKSEYHIKPNQQDISFVSFTCVTEMEKTDLDIAVHMTYNTGQTVVAFHSPYWMVNKTGR
MLQYKADGIHRKHPPNYKKPVLFSFQPNHFFNNNKVQLMVTDSELSNQFSIDTVGSHGAVKCKGLKMDYQVGVTIDLSSFNITRIVTFTP
FYMIKNKSKYHISVAEEGNDKWLSLDLEQCIPFWPEYASSKLLIQVERSEDPPKRIYFNKQENCILLRLDNELGGIIAEVNLAEHSTVIT
FLDYHDGAATFLLINHTKNELVQYNQSSLSEIEDSLPPGKAVFYTWADPVGSRRLKWRCRKSHGEVTQKDDMMMPIDLGEKTIYLVSFFE
GLQRIILFTEDPRVFKVTYESEKAELAEQEIAVALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVKHTEKLEREFKE
YTESSPSEDKVIQLDTNVPVRLTPTGHNMKILQPHVIALRRNYLPALKVEYNTSAHQSSFRIQIYRIQIQNQIHGAVFPFVFYPVKPPKS
VTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLRLDLGFIYALTDLMTEAEVTENTEVELFHKDIEAFKEEYKTASLVDQSQV
SLYEYFHISPIKLHLSVSLSSGREEAKDSKQNGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNYQFHTTSDLQSEVIRHYSKQAI
KQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITGAMAKGVAAMTMDEDYQQ
KRREAMNKQPAGFREGITRGGKGLVSGFVSGITGIVTKPIKGAQKGGAAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKRATETSEV

--------------------------------------------------------------
>In-frame_ENST00000541971_ENST00000376636_TCGA-IN-8462-11A_MLF1IP_chr4_185637551_-_VPS13A_chr9_79910458_length(transcript)=8113nt_BP=618nt
ATGGCCCCGCGGGGGCGGCGGCGGCCGCGGCCTCACAGGTCTGAGGGCGCAAGACGTTCAAAGAACACTTTAGAAAGAACACATTCCATG
AAAGATAAAGCTGGTCAAAAGTGCAAGCCTATTGACGTGTTCGACTTTCCTGATAATTCTGATGTCTCAAGCATTGGCAGGCTGGGTGAA
AATGAGAAAGATGAAGAAACTTATGAGACCTTTGATCCTCCTTTACATAGCACAGCTATATATGCTGATGAAGAAGAATTCTCCAAACAT
TGTGGACTGTCTCTCTCTTCAACTCCTCCAGGAAAAGAAGCAAAAAGAAGTTCAGACACTTCTGGAAATGAAGCAAGTGAAATCGAATCT
GTAAAAATTAGTGCAAAAAAGCCAGGAAGAAAGCTCAGGCCCATTAGTGATGACTCTGAAAGCATTGAAGAAAGTGATACAAGGAGAAAA
GTTAAATCAGCAGAGAAAATAAGTACACAACGTCATGAGGTTATTCGAACCACAGCGTCTTCAGAACTTTCAGAGAAACCAGCTGAGTCT
GTCACTTCTAAAAAGACAGGACCCCTTAGTGCCCAGCCCTCTGTTGAAAAAGAGAACTTGGCAATAGAAAGTCAATCGGCTTTTATAGAT
AATTTTCAGGCAGCTAAACAAGCCTTGGCTGAGGCAACTGTTCAGGCAGCTGGAATGGCTGCTACTGGTGTAAAAGAACTCGCACAAAGG
AGTTCCAGAATGGCACTGGATATTAACATCAAAGCCCCAGTTGTGGTCATCCCGCAGTCTCCAGTTTCTGAAAATGTTTTTGTTGCTGAT
TTTGGACTAATTACAATGACAAATACCTTTCATATGATAACAGAGAGCCAGAGCTCTCCCCCACCTGTTATTGATTTGATAACAATAAAG
CTGAGTGAAATGCGACTATACAGATCTCGATTTATTAATGATGCATACCAGGAAGTACTGGATCTACTCCTGCCATTAAATCTTGAGGTT
GTGGTTGAACGAAATTTATGCTGGGAGTGGTACCAGGAAGTTCCTTGTTTTAATGTAAATGCTCAGCTGAAACCAATGGAGTTCATTCTT
AGTCAAGAAGATATAACAACTATTTTTAAAACATTGCATGGCAATATATGGTATGAAAAAGATGGTAGTGCCTCACCTGCTGTAACAAAA
GACCAATACAGTGCCACTAGTGGAGTTACTACTAATGCTTCACACCATTCAGGAGGAGCAACTGTGGTGACAGCTGCTGTGGTAGAAGTA
CATTCACGTGCCTTACTAGTTAAGACAACACTAAACATAAGCTTCAAAACTGATGATCTCACCATGGTGCTGTATAGTCCAGGTCCTAAA
CAGGCTTCCTTTACAGATGTTCGTGATCCTTCTCTGAAACTTGCTGAATTTAAATTGGAGAATATTATAAGTACTTTAAAAATGTATACA
GATGGCTCAACATTTTCTTCCTTCTCATTAAAAAACTGTATTTTAGATGATAAAAGACCTCATGTCAAGAAAGCAACTCCTCGAATGATA
GGACTGACAGTTGGTTTTGACAAAAAAGACATGATGGATATAAAGTACAGGAAAGTCAGAGATGGTTGTGTGACTGATGCGGTCTTTCAA
GAAATGTATATTTGTGCAAGCGTAGAATTTCTGCAGACTGTTGCAAATGTCTTTCTTGAGGCCTACACCACAGGCACTGCTGTAGAAACC
AGTGTGCAAACATGGACTGCTAAGGAAGAAGTACCTACACAGGAATCAGTGAAGTGGGAAATTAATGTTATTATTAAAAATCCTGAAATT
GTGTTTGTAGCTGACATGACAAAAAATGATGCTCCTGCTTTAGTCATTACAACACAATGTGAAATTTGCTATAAAGGTAACCTTGAAAAT
AGTACAATGACTGCTGCCATTAAAGATCTCCAAGTGAGAGCCTGCCCGTTTCTTCCAGTCAAGAGAAAAGGCAAAATCACTACTGTTTTG
CAGCCCTGTGACTTGTTTTATCAAACTACTCAGAAAGGTACAGATCCACAAGTGATCGATATGTCAGTAAAATCCCTGACACTAAAGGTT
TCACCAGTTATTATAAATACTATGATTACCATAACTTCAGCACTGTATACAACTAAGGAAACCATCCCAGAAGAAACGGCTTCTTCTACT
GCACATTTATGGGAAAAGAAGGATACAAAGACTTTAAAAATGTGGTTTCTTGAAGAATCAAATGAAACTGAAAAAATAGCTCCCACAACT
GAATTGGTACCCAAAGGCGAGATGATAAAAATGAACATTGATTCTATTTTTATAGTTCTTGAGGCTGGAATTGGTCATAGAACAGTACCT
ATGCTTCTGGCAAAGTCACGTTTTTCAGGGGAAGGCAAAAACTGGAGTTCCCTAATAAATCTGCACTGTCAGCTTGAGCTAGAAGTGCAT
TATTATAATGAAATGTTTGGTGTATGGGAGCCTTTGCTTGAACCCTTAGAAATTGATCAGACTGAGGATTTTAGACCATGGAATCTTGGT
ATCAAGATGAAAAAGAAAGCAAAAATGGCCATTGTTGAGTCAGATCCTGAAGAAGAAAACTACAAAGTGCCAGAATATAAAACTGTCATC
AGTTTCCATTCAAAAGACCAATTAAACATTACATTATCCAAATGTGGTCTTGTAATGTTAAACAATTTAGTCAAGGCATTTACAGAAGCT
GCCACTGGATCTTCAGCTGACTTCGTAAAGGATCTAGCACCATTTATGATTTTAAATTCCCTTGGACTTACTATTTCTGTTTCGCCAAGT
GATTCTTTTAGTGTACTCAACATTCCTATGGCAAAATCATATGTATTGAAAAATGGAGAAAGTTTAAGTATGGATTATATCCGAACCAAG
GACAATGATCATTTCAATGCAATGACCAGCCTAAGCAGCAAACTCTTCTTCATTCTTCTTACACCTGTTAACCATTCTACTGCTGATAAG
ATTCCTTTAACAAAAGTGGGACGACGTCTGTACACTGTAAGACACAGAGAGTCTGGCGTTGAAAGATCTATTGTTTGTCAAATTGATACA
GTAGAAGGAAGTAAGAAGGTCACAATTCGCTCCCCAGTGCAGATAAGAAATCATTTTTCAGTCCCACTGTCTGTTTACGAAGGGGATACC
TTATTGGGAACTGCCTCACCTGAAAATGAATTCAACATACCATTAGGATCTTACCGATCATTCATTTTTCTGAAGCCAGAAGATGAGAAC
TATCAAATGTGTGAAGGAATTGACTTTGAAGAGATTATAAAAAATGATGGTGCTCTTCTAAAGAAGAAATGTAGATCTAAAAACCCTTCT
AAGGAATCATTTCTCATTAATATTGTTCCAGAAAAAGATAATTTAACATCTCTATCAGTGTATTCAGAAGATGGTTGGGATTTACCATAC
ATAATGCATTTGTGGCCACCTATCCTGCTCCGAAATCTTCTTCCTTACAAAATTGCTTATTATATAGAGGGAATTGAAAATTCGGTTTTT
ACTCTAAGTGAAGGACATTCAGCCCAGATTTGTACTGCACAGTTGGGTAAAGCCAGGCTACATTTAAAATTACTTGACTATCTCAATCAC
GATTGGAAAAGTGAATATCACATAAAGCCTAATCAGCAAGACATTAGTTTTGTCAGTTTTACTTGTGTTACAGAAATGGAAAAGACTGAT
TTAGATATTGCTGTCCATATGACTTACAATACTGGTCAGACAGTTGTGGCATTTCATAGTCCTTATTGGATGGTCAATAAAACTGGCCGC
ATGTTACAGTACAAAGCAGACGGAATTCATCGAAAGCATCCACCTAATTATAAAAAGCCAGTTCTCTTTTCTTTTCAGCCAAATCACTTT
TTTAATAACAATAAGGTTCAACTTATGGTAACTGATAGTGAGTTGTCCAATCAGTTTTCAATTGATACTGTTGGTAGTCATGGAGCTGTT
AAATGTAAAGGCCTGAAAATGGACTATCAAGTTGGTGTCACTATAGACCTGAGCAGTTTTAACATTACTAGAATTGTGACATTTACCCCT
TTTTATATGATTAAAAACAAAAGCAAATACCATATATCAGTGGCTGAAGAAGGAAATGATAAATGGCTCTCTCTTGATTTGGAGCAGTGT
ATCCCCTTTTGGCCTGAGTATGCTTCTAGTAAACTTCTTATTCAAGTCGAAAGGAGTGAAGATCCTCCCAAAAGGATATATTTTAACAAG
CAGGAAAATTGTATTCTATTGCGTCTAGATAACGAGCTTGGAGGTATTATAGCAGAAGTGAATTTGGCCGAGCATTCTACAGTTATTACA
TTTTTAGATTATCATGATGGAGCAGCTACATTCCTCTTAATAAATCACACAAAGAATGAACTTGTTCAATACAATCAAAGTTCTCTCAGT
GAAATAGAAGATTCCCTCCCTCCTGGTAAAGCCGTGTTTTATACATGGGCTGATCCGGTGGGCTCTAGAAGGCTGAAGTGGAGATGTAGA
AAAAGCCATGGTGAAGTAACACAGAAGGATGATATGATGATGCCTATAGATTTGGGGGAAAAGACAATATATTTAGTTTCATTCTTTGAA
GGTTTACAACGCATTATTTTATTCACTGAAGATCCAAGGGTATTTAAAGTAACATATGAAAGTGAGAAAGCAGAGTTAGCAGAGCAAGAA
ATTGCAGTGGCATTACAAGATGTTGGAATTTCTCTTGTCAACAATTACACGAAGCAAGAAGTAGCCTATATAGGCATTACAAGTTCTGAT
GTGGTTTGGGAAACAAAGCCCAAGAAGAAGGCAAGATGGAAGCCAATGAGTGTAAAGCACACTGAGAAGTTAGAGAGAGAATTTAAGGAA
TATACTGAATCTTCTCCTTCAGAAGATAAGGTTATTCAGTTGGACACTAATGTTCCGGTTCGCCTAACCCCTACTGGTCATAACATGAAA
ATTCTGCAGCCGCATGTAATAGCTCTACGAAGAAATTATCTTCCAGCATTAAAAGTGGAATATAACACATCTGCACATCAATCATCATTT
AGAATTCAGATTTACAGAATACAGATCCAAAATCAGATACATGGTGCTGTATTTCCCTTTGTGTTTTATCCTGTTAAACCTCCAAAGTCG
GTCACCATGGATTCAGCACCAAAGCCCTTTACAGATGTCAGTATTGTCATGAGATCTGCAGGACATTCCCAGATATCACGTATTAAGTAT
TTCAAAGTATTGATTCAAGAAATGGATCTCAGGTTAGATCTTGGGTTTATCTATGCTTTAACAGACCTTATGACAGAAGCTGAGGTGACT
GAAAATACAGAGGTTGAGCTTTTTCATAAAGATATAGAAGCTTTCAAAGAAGAATATAAAACAGCCTCATTAGTAGATCAATCACAAGTC
AGCCTCTATGAATATTTTCATATATCTCCTATCAAGTTACATTTAAGTGTTTCACTGAGTTCCGGCAGAGAAGAAGCTAAAGATTCAAAA
CAAAATGGAGGACTGATTCCAGTTCATTCTTTAAATCTTTTGCTGAAGAGTATTGGTGCCACACTGACAGATGTACAAGATGTAGTTTTT
AAGCTTGCATTTTTTGAACTCAACTATCAGTTCCATACAACATCCGATCTACAGTCTGAAGTCATAAGACACTATTCAAAACAGGCCATT
AAGCAGATGTATGTACTCATTCTTGGACTTGATGTTTTGGGAAATCCATTTGGCTTAATTAGAGAATTTTCTGAAGGTGTAGAAGCATTT
TTTTATGAACCTTACCAGGGAGCCATCCAGGGTCCTGAAGAGTTTGTGGAAGGAATGGCACTAGGACTTAAGGCACTAGTTGGTGGAGCT
GTTGGTGGATTGGCTGGTGCTGCCTCCAAAATCACCGGTGCTATGGCTAAGGGGGTAGCAGCTATGACCATGGATGAAGACTACCAACAG
AAGAGAAGAGAAGCCATGAATAAGCAACCAGCTGGTTTTAGAGAAGGCATCACTCGTGGAGGAAAAGGCTTAGTTTCTGGATTTGTTAGT
GGCATAACAGGAATTGTTACAAAACCAATCAAAGGAGCTCAAAAAGGAGGAGCAGCTGGTTTCTTTAAAGGTGTTGGGAAAGGTTTAGTA
GGAGCGGTAGCAAGGCCAACTGGAGGCATCATAGACATGGCTAGCAGTACATTTCAGGGAATAAAAAGAGCTACAGAGACTTCTGAAGTG
GAGAGTCTGCGACCTCCTCGGTTCTTCAATGAAGATGGAGTTATCAGACCGTACAGGTTGAGGGATGGGACTGGAAATCAAATGTTACAG
GTCATGGAAAATGGAAGATTTGCAAAATACAAATATTTTACCCATGTCATGATCAATAAGACAGATATGCTAATGATAACCAGACGTGGT
GTATTGTTTGTAACAAAGGGAACATTTGGACAACTCACGTGTGAGTGGCAGTATAGTTTTGATGAATTTACCAAAGAGCCATTCATTGTT
CATGGGAGAAGATTGCGCATTGAAGCAAAGGAACGAGTGAAGTCTGTATTTCATGCCAGAGAGTTTGGAAAAATAATTAACTTCAAGACC
CCAGAGGATGCCAGGTGGATCCTCACAAAGCTACAAGAAGCAAGAGAACCTTCTCCGAGCCTCTGACAGAGAACACTGCCTGAAGACACA
CAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTG
GATGCTAAAAAACAAAAACAAACAAAAAAACAAAAACAAAAAAACAAAACCAGAATCAGGTAAAACAGCTATGTGATTAAAATATTTTAA
TTCTTCAGCAATTACCCGGTTTTCTAAATTGAATCATGCATCTATTTATAATTCTAATTATTTTGTAAAAGAAGACAAAATTATGAATCT
TAAGTATTTGCTCCATCTTTTTCTCTGTAATGGTGGAGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
ACATTTTGTACTTCTGTCATGCTTATTTCAAACTCCCTGAGTGATGGGTAAGAAATCAAACATTGCCTCAGTGGTATCAAGAGAACTTTG
GTGGTGGTTTCTTCAGAATCATGAAGTTCTTTTGCCAGATAAATATTTTGATATTATTTTCCTTTTTAATATAAAGGATAGGTTTGAATT
GTACTTAAAATGCATAGCATTATTAAAAACAATCTTTTAAAATATAATTTATAACATAGATTGAAGCCTCCCCTTAAGAAACCTTAAAGA
AATAAGTATCCTACTCAAAAAAGGAAGTCTGTTTCAGAACTTTAGGGCCTTTGAAATATTTCCTCAAGCCTATTTCATGAGATCTACTTG
GTTTACCCAAGTCATGTTTTTAATAGACTGCTAATATCAAAGGAGAATTTTTAAAGCCTTAACAATGCCTACTTTCCATTCACTGTTAAC
ATGGAATAAACACAATTCCCAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAAT
CTAACCCAATAACCTGTCCCGTTGCCAATAGATTGAGAATTTCTGGTTTGCTTACTCTACAGTTATTCAAATGAGAGTCACGCTTTTAAA
TTTACAGCTCATCACAGAAATCATCAGCTATACATTAGTAAAAATAAGGACATGAGGTTTTCTTTCTTGGTTTTTGTCCAAGATCTTTGC
ACCTTAATATTAATGGACTGTTTCAGGTAAAAGAGAATGAATGTATGATTGTGAACTGTGAAGAGAATGATGCAGGATCCTATTTAGTTA
CTGAATAATACAGAGTATTCAATGCATGTTGTATGTGCCACCAAGTTACTATTAACTGTTTTTGGAATTGAAGACTCTGTATAGTCAATA
GTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCTTTGTTGTAAAAGCTAAAATAAACAGCATGCTATATTGTAATTGTATTTCTTGC
TGACCAAATCTACTAAATGCTATTGATTTCTCTCTGATTACTAAAACACATTGTTTATTCTCAGTAGTTTCCCCCAAAATGCTTTTTTCT

>In-frame_ENST00000541971_ENST00000376636_TCGA-IN-8462-11A_MLF1IP_chr4_185637551_-_VPS13A_chr9_79910458_length(amino acids)=2211AA_start in transcript=0_stop in transcript=6635
MAPRGRRRPRPHRSEGARRSKNTLERTHSMKDKAGQKCKPIDVFDFPDNSDVSSIGRLGENEKDEETYETFDPPLHSTAIYADEEEFSKH
CGLSLSSTPPGKEAKRSSDTSGNEASEIESVKISAKKPGRKLRPISDDSESIEESDTRRKVKSAEKISTQRHEVIRTTASSELSEKPAES
VTSKKTGPLSAQPSVEKENLAIESQSAFIDNFQAAKQALAEATVQAAGMAATGVKELAQRSSRMALDINIKAPVVVIPQSPVSENVFVAD
FGLITMTNTFHMITESQSSPPPVIDLITIKLSEMRLYRSRFINDAYQEVLDLLLPLNLEVVVERNLCWEWYQEVPCFNVNAQLKPMEFIL
SQEDITTIFKTLHGNIWYEKDGSASPAVTKDQYSATSGVTTNASHHSGGATVVTAAVVEVHSRALLVKTTLNISFKTDDLTMVLYSPGPK
QASFTDVRDPSLKLAEFKLENIISTLKMYTDGSTFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMMDIKYRKVRDGCVTDAVFQ
EMYICASVEFLQTVANVFLEAYTTGTAVETSVQTWTAKEEVPTQESVKWEINVIIKNPEIVFVADMTKNDAPALVITTQCEICYKGNLEN
STMTAAIKDLQVRACPFLPVKRKGKITTVLQPCDLFYQTTQKGTDPQVIDMSVKSLTLKVSPVIINTMITITSALYTTKETIPEETASST
AHLWEKKDTKTLKMWFLEESNETEKIAPTTELVPKGEMIKMNIDSIFIVLEAGIGHRTVPMLLAKSRFSGEGKNWSSLINLHCQLELEVH
YYNEMFGVWEPLLEPLEIDQTEDFRPWNLGIKMKKKAKMAIVESDPEEENYKVPEYKTVISFHSKDQLNITLSKCGLVMLNNLVKAFTEA
ATGSSADFVKDLAPFMILNSLGLTISVSPSDSFSVLNIPMAKSYVLKNGESLSMDYIRTKDNDHFNAMTSLSSKLFFILLTPVNHSTADK
IPLTKVGRRLYTVRHRESGVERSIVCQIDTVEGSKKVTIRSPVQIRNHFSVPLSVYEGDTLLGTASPENEFNIPLGSYRSFIFLKPEDEN
YQMCEGIDFEEIIKNDGALLKKKCRSKNPSKESFLINIVPEKDNLTSLSVYSEDGWDLPYIMHLWPPILLRNLLPYKIAYYIEGIENSVF
TLSEGHSAQICTAQLGKARLHLKLLDYLNHDWKSEYHIKPNQQDISFVSFTCVTEMEKTDLDIAVHMTYNTGQTVVAFHSPYWMVNKTGR
MLQYKADGIHRKHPPNYKKPVLFSFQPNHFFNNNKVQLMVTDSELSNQFSIDTVGSHGAVKCKGLKMDYQVGVTIDLSSFNITRIVTFTP
FYMIKNKSKYHISVAEEGNDKWLSLDLEQCIPFWPEYASSKLLIQVERSEDPPKRIYFNKQENCILLRLDNELGGIIAEVNLAEHSTVIT
FLDYHDGAATFLLINHTKNELVQYNQSSLSEIEDSLPPGKAVFYTWADPVGSRRLKWRCRKSHGEVTQKDDMMMPIDLGEKTIYLVSFFE
GLQRIILFTEDPRVFKVTYESEKAELAEQEIAVALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVKHTEKLEREFKE
YTESSPSEDKVIQLDTNVPVRLTPTGHNMKILQPHVIALRRNYLPALKVEYNTSAHQSSFRIQIYRIQIQNQIHGAVFPFVFYPVKPPKS
VTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLRLDLGFIYALTDLMTEAEVTENTEVELFHKDIEAFKEEYKTASLVDQSQV
SLYEYFHISPIKLHLSVSLSSGREEAKDSKQNGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNYQFHTTSDLQSEVIRHYSKQAI
KQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITGAMAKGVAAMTMDEDYQQ
KRREAMNKQPAGFREGITRGGKGLVSGFVSGITGIVTKPIKGAQKGGAAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKRATETSEV
ESLRPPRFFNEDGVIRPYRLRDGTGNQMLQVMENGRFAKYKYFTHVMINKTDMLMITRRGVLFVTKGTFGQLTCEWQYSFDEFTKEPFIV

--------------------------------------------------------------
>In-frame_ENST00000541971_ENST00000360280_TCGA-IN-8462-11A_MLF1IP_chr4_185637551_-_VPS13A_chr9_79910458_length(transcript)=12171nt_BP=618nt
ATGGCCCCGCGGGGGCGGCGGCGGCCGCGGCCTCACAGGTCTGAGGGCGCAAGACGTTCAAAGAACACTTTAGAAAGAACACATTCCATG
AAAGATAAAGCTGGTCAAAAGTGCAAGCCTATTGACGTGTTCGACTTTCCTGATAATTCTGATGTCTCAAGCATTGGCAGGCTGGGTGAA
AATGAGAAAGATGAAGAAACTTATGAGACCTTTGATCCTCCTTTACATAGCACAGCTATATATGCTGATGAAGAAGAATTCTCCAAACAT
TGTGGACTGTCTCTCTCTTCAACTCCTCCAGGAAAAGAAGCAAAAAGAAGTTCAGACACTTCTGGAAATGAAGCAAGTGAAATCGAATCT
GTAAAAATTAGTGCAAAAAAGCCAGGAAGAAAGCTCAGGCCCATTAGTGATGACTCTGAAAGCATTGAAGAAAGTGATACAAGGAGAAAA
GTTAAATCAGCAGAGAAAATAAGTACACAACGTCATGAGGTTATTCGAACCACAGCGTCTTCAGAACTTTCAGAGAAACCAGCTGAGTCT
GTCACTTCTAAAAAGACAGGACCCCTTAGTGCCCAGCCCTCTGTTGAAAAAGAGAACTTGGCAATAGAAAGTCAATCGGCTTTTATAGAT
AATTTTCAGGCAGCTAAACAAGCCTTGGCTGAGGCAACTGTTCAGGCAGCTGGAATGGCTGCTACTGGTGTAAAAGAACTCGCACAAAGG
AGTTCCAGAATGGCACTGGATATTAACATCAAAGCCCCAGTTGTGGTCATCCCGCAGTCTCCAGTTTCTGAAAATGTTTTTGTTGCTGAT
TTTGGACTAATTACAATGACAAATACCTTTCATATGATAACAGAGAGCCAGAGCTCTCCCCCACCTGTTATTGATTTGATAACAATAAAG
CTGAGTGAAATGCGACTATACAGATCTCGATTTATTAATGATGCATACCAGGAAGTACTGGATCTACTCCTGCCATTAAATCTTGAGGTT
GTGGTTGAACGAAATTTATGCTGGGAGTGGTACCAGGAAGTTCCTTGTTTTAATGTAAATGCTCAGCTGAAACCAATGGAGTTCATTCTT
AGTCAAGAAGATATAACAACTATTTTTAAAACATTGCATGGCAATATATGGTATGAAAAAGATGGTAGTGCCTCACCTGCTGTAACAAAA
GACCAATACAGTGCCACTAGTGGAGTTACTACTAATGCTTCACACCATTCAGGAGGAGCAACTGTGGTGACAGCTGCTGTGGTAGAAGTA
CATTCACGTGCCTTACTAGTTAAGACAACACTAAACATAAGCTTCAAAACTGATGATCTCACCATGGTGCTGTATAGTCCAGGTCCTAAA
CAGGCTTCCTTTACAGATGTTCGTGATCCTTCTCTGAAACTTGCTGAATTTAAATTGGAGAATATTATAAGTACTTTAAAAATGTATACA
GATGGCTCAACATTTTCTTCCTTCTCATTAAAAAACTGTATTTTAGATGATAAAAGACCTCATGTCAAGAAAGCAACTCCTCGAATGATA
GGACTGACAGTTGGTTTTGACAAAAAAGACATGATGGATATAAAGTACAGGAAAGTCAGAGATGGTTGTGTGACTGATGCGGTCTTTCAA
GAAATGTATATTTGTGCAAGCGTAGAATTTCTGCAGACTGTTGCAAATGTCTTTCTTGAGGCCTACACCACAGGCACTGCTGTAGAAACC
AGTGTGCAAACATGGACTGCTAAGGAAGAAGTACCTACACAGGAATCAGTGAAGTGGGAAATTAATGTTATTATTAAAAATCCTGAAATT
GTGTTTGTAGCTGACATGACAAAAAATGATGCTCCTGCTTTAGTCATTACAACACAATGTGAAATTTGCTATAAAGGTAACCTTGAAAAT
AGTACAATGACTGCTGCCATTAAAGATCTCCAAGTGAGAGCCTGCCCGTTTCTTCCAGTCAAGAGAAAAGGCAAAATCACTACTGTTTTG
CAGCCCTGTGACTTGTTTTATCAAACTACTCAGAAAGGTACAGATCCACAAGTGATCGATATGTCAGTAAAATCCCTGACACTAAAGGTT
TCACCAGTTATTATAAATACTATGATTACCATAACTTCAGCACTGTATACAACTAAGGAAACCATCCCAGAAGAAACGGCTTCTTCTACT
GCACATTTATGGGAAAAGAAGGATACAAAGACTTTAAAAATGTGGTTTCTTGAAGAATCAAATGAAACTGAAAAAATAGCTCCCACAACT
GAATTGGTACCCAAAGGCGAGATGATAAAAATGAACATTGATTCTATTTTTATAGTTCTTGAGGCTGGAATTGGTCATAGAACAGTACCT
ATGCTTCTGGCAAAGTCACGTTTTTCAGGGGAAGGCAAAAACTGGAGTTCCCTAATAAATCTGCACTGTCAGCTTGAGCTAGAAGTGCAT
TATTATAATGAAATGTTTGGTGTATGGGAGCCTTTGCTTGAACCCTTAGAAATTGATCAGACTGAGGATTTTAGACCATGGAATCTTGGT
ATCAAGATGAAAAAGAAAGCAAAAATGGCCATTGTTGAGTCAGATCCTGAAGAAGAAAACTACAAAGTGCCAGAATATAAAACTGTCATC
AGTTTCCATTCAAAAGACCAATTAAACATTACATTATCCAAATGTGGTCTTGTAATGTTAAACAATTTAGTCAAGGCATTTACAGAAGCT
GCCACTGGATCTTCAGCTGACTTCGTAAAGGATCTAGCACCATTTATGATTTTAAATTCCCTTGGACTTACTATTTCTGTTTCGCCAAGT
GATTCTTTTAGTGTACTCAACATTCCTATGGCAAAATCATATGTATTGAAAAATGGAGAAAGTTTAAGTATGGATTATATCCGAACCAAG
GACAATGATCATTTCAATGCAATGACCAGCCTAAGCAGCAAACTCTTCTTCATTCTTCTTACACCTGTTAACCATTCTACTGCTGATAAG
ATTCCTTTAACAAAAGTGGGACGACGTCTGTACACTGTAAGACACAGAGAGTCTGGCGTTGAAAGATCTATTGTTTGTCAAATTGATACA
GTAGAAGGAAGTAAGAAGGTCACAATTCGCTCCCCAGTGCAGATAAGAAATCATTTTTCAGTCCCACTGTCTGTTTACGAAGGGGATACC
TTATTGGGAACTGCCTCACCTGAAAATGAATTCAACATACCATTAGGATCTTACCGATCATTCATTTTTCTGAAGCCAGAAGATGAGAAC
TATCAAATGTGTGAAGGAATTGACTTTGAAGAGATTATAAAAAATGATGGTGCTCTTCTAAAGAAGAAATGTAGATCTAAAAACCCTTCT
AAGGAATCATTTCTCATTAATATTGTTCCAGAAAAAGATAATTTAACATCTCTATCAGTGTATTCAGAAGATGGTTGGGATTTACCATAC
ATAATGCATTTGTGGCCACCTATCCTGCTCCGAAATCTTCTTCCTTACAAAATTGCTTATTATATAGAGGGAATTGAAAATTCGGTTTTT
ACTCTAAGTGAAGGACATTCAGCCCAGATTTGTACTGCACAGTTGGGTAAAGCCAGGCTACATTTAAAATTACTTGACTATCTCAATCAC
GATTGGAAAAGTGAATATCACATAAAGCCTAATCAGCAAGACATTAGTTTTGTCAGTTTTACTTGTGTTACAGAAATGGAAAAGACTGAT
TTAGATATTGCTGTCCATATGACTTACAATACTGGTCAGACAGTTGTGGCATTTCATAGTCCTTATTGGATGGTCAATAAAACTGGCCGC
ATGTTACAGTACAAAGCAGACGGAATTCATCGAAAGCATCCACCTAATTATAAAAAGCCAGTTCTCTTTTCTTTTCAGCCAAATCACTTT
TTTAATAACAATAAGGTTCAACTTATGGTAACTGATAGTGAGTTGTCCAATCAGTTTTCAATTGATACTGTTGGTAGTCATGGAGCTGTT
AAATGTAAAGGCCTGAAAATGGACTATCAAGTTGGTGTCACTATAGACCTGAGCAGTTTTAACATTACTAGAATTGTGACATTTACCCCT
TTTTATATGATTAAAAACAAAAGCAAATACCATATATCAGTGGCTGAAGAAGGAAATGATAAATGGCTCTCTCTTGATTTGGAGCAGTGT
ATCCCCTTTTGGCCTGAGTATGCTTCTAGTAAACTTCTTATTCAAGTCGAAAGGAGTGAAGATCCTCCCAAAAGGATATATTTTAACAAG
CAGGAAAATTGTATTCTATTGCGTCTAGATAACGAGCTTGGAGGTATTATAGCAGAAGTGAATTTGGCCGAGCATTCTACAGTTATTACA
TTTTTAGATTATCATGATGGAGCAGCTACATTCCTCTTAATAAATCACACAAAGAATGAACTTGTTCAATACAATCAAAGTTCTCTCAGT
GAAATAGAAGATTCCCTCCCTCCTGGTAAAGCCGTGTTTTATACATGGGCTGATCCGGTGGGCTCTAGAAGGCTGAAGTGGAGATGTAGA
AAAAGCCATGGTGAAGTAACACAGAAGGATGATATGATGATGCCTATAGATTTGGGGGAAAAGACAATATATTTAGTTTCATTCTTTGAA
GGTTTACAACGCATTATTTTATTCACTGAAGATCCAAGGGTATTTAAAGTAACATATGAAAGTGAGAAAGCAGAGTTAGCAGAGCAAGAA
ATTGCAGTGGCATTACAAGATGTTGGAATTTCTCTTGTCAACAATTACACGAAGCAAGAAGTAGCCTATATAGGCATTACAAGTTCTGAT
GTGGTTTGGGAAACAAAGCCCAAGAAGAAGGCAAGATGGAAGCCAATGAGTGTAAAGCACACTGAGAAGTTAGAGAGAGAATTTAAGGAA
TATACTGAATCTTCTCCTTCAGAAGATAAGGTTATTCAGTTGGACACTAATGTTCCGGTTCGCCTAACCCCTACTGGTCATAACATGAAA
ATTCTGCAGCCGCATGTAATAGCTCTACGAAGAAATTATCTTCCAGCATTAAAAGTGGAATATAACACATCTGCACATCAATCATCATTT
AGAATTCAGATTTACAGAATACAGATCCAAAATCAGATACATGGTGCTGTATTTCCCTTTGTGTTTTATCCTGTTAAACCTCCAAAGTCG
GTCACCATGGATTCAGCACCAAAGCCCTTTACAGATGTCAGTATTGTCATGAGATCTGCAGGACATTCCCAGATATCACGTATTAAGTAT
TTCAAAGTATTGATTCAAGAAATGGATCTCAGGTTAGATCTTGGGTTTATCTATGCTTTAACAGACCTTATGACAGAAGCTGAGGTGACT
GAAAATACAGAGGTTGAGCTTTTTCATAAAGATATAGAAGCTTTCAAAGAAGAATATAAAACAGCCTCATTAGTAGATCAATCACAAGTC
AGCCTCTATGAATATTTTCATATATCTCCTATCAAGTTACATTTAAGTGTTTCACTGAGTTCCGGCAGAGAAGAAGCTAAAGATTCAAAA
CAAAATGGAGGACTGATTCCAGTTCATTCTTTAAATCTTTTGCTGAAGAGTATTGGTGCCACACTGACAGATGTACAAGATGTAGTTTTT
AAGCTTGCATTTTTTGAACTCAACTATCAGTTCCATACAACATCCGATCTACAGTCTGAAGTCATAAGACACTATTCAAAACAGGCCATT
AAGCAGATGTATGTACTCATTCTTGGACTTGATGTTTTGGGAAATCCATTTGGCTTAATTAGAGAATTTTCTGAAGGTGTAGAAGCATTT
TTTTATGAACCTTACCAGGGAGCCATCCAGGGTCCTGAAGAGTTTGTGGAAGGAATGGCACTAGGACTTAAGGCACTAGTTGGTGGAGCT
GTTGGTGGATTGGCTGGTGCTGCCTCCAAAATCACCGGTGCTATGGCTAAGGGGGTAGCAGCTATGACCATGGATGAAGACTACCAACAG
AAGAGAAGAGAAGCCATGAATAAGCAACCAGCTGGTTTTAGAGAAGGCATCACTCGTGGAGGAAAAGGCTTAGTTTCTGGATTTGTTAGT
GGCATAACAGGAATTGTTACAAAACCAATCAAAGGAGCTCAAAAAGGAGGAGCAGCTGGTTTCTTTAAAGGTGTTGGGAAAGGTTTAGTA
GGAGCGGTAGCAAGGCCAACTGGAGGCATCATAGACATGGCTAGCAGTACATTTCAGGGAATAAAAAGAGCTACAGAGACTTCTGAAGTG
GAGAGTCTGCGACCTCCTCGGTTCTTCAATGAAGATGGAGTTATCAGACCGTACAGGTTGAGGGATGGGACTGGAAATCAAATGTTACAG
GTCATGGAAAATGGAAGATTTGCAAAATACAAATATTTTACCCATGTCATGATCAATAAGACAGATATGCTAATGATAACCAGACGTGGT
GTATTGTTTGTAACAAAGGGAACATTTGGACAACTCACGTGTGAGTGGCAGTATAGTTTTGATGAATTTACCAAAGAGCCATTCATTGTT
CATGGGAGAAGATTGCGCATTGAAGCAAAGGAACGAGTGAAGTCTGTATTTCATGCCAGAGAGTTTGGAAAAATAATTAACTTCAAGACC
CCAGAGGATGCCAGGTGGATCCTCACAAAGCTACAAGAAGCAAGAGAACCTTCTCCGAGCCTCTGACAGAGAACACTGCCTGAAGACACA
CAGCAATAAGTGATTACAGCTCCTAGACTACCTTCCAAAACCTGTTTGGGAAGCATATTACAGAAATGATTTCAAGTACCCTGTATTCTG
GATGCTAAAAAACAAAAACAAACAAAAAAACAAAAACAAAAAAACAAAACCAGAATCAGGTAAAACAGCTATGTGATTAAAATATTTTAA
TTCTTCAGCAATTACCCGGTTTTCTAAATTGAATCATGCATCTATTTATAATTCTAATTATTTTGTAAAAGAAGACAAAATTATGAATCT
TAAGTATTTGCTCCATCTTTTTCTCTGTAATGGTGGAGAGGCTGCCCATAATTCATCTCCACATGGAGCCAAGTTTAATGTTTCTAGTTC
ACATTTTGTACTTCTGTCATGCTTATTTCAAACTCCCTGAGTGATGGGTAAGAAATCAAACATTGCCTCAGTGGTATCAAGAGAACTTTG
GTGGTGGTTTCTTCAGAATCATGAAGTTCTTTTGCCAGATAAATATTTTGATATTATTTTCCTTTTTAATATAAAGGATAGGTTTGAATT
GTACTTAAAATGCATAGCATTATTAAAAACAATCTTTTAAAATATAATTTATAACATAGATTGAAGCCTCCCCTTAAGAAACCTTAAAGA
AATAAGTATCCTACTCAAAAAAGGAAGTCTGTTTCAGAACTTTAGGGCCTTTGAAATATTTCCTCAAGCCTATTTCATGAGATCTACTTG
GTTTACCCAAGTCATGTTTTTAATAGACTGCTAATATCAAAGGAGAATTTTTAAAGCCTTAACAATGCCTACTTTCCATTCACTGTTAAC
ATGGAATAAACACAATTCCCAACATCTTAGATAGTGTATTATGCTTCCAACAGACAGTCCCTCTCATATAAAGTTTATGTACCCTAAAAT
CTAACCCAATAACCTGTCCCGTTGCCAATAGATTGAGAATTTCTGGTTTGCTTACTCTACAGTTATTCAAATGAGAGTCACGCTTTTAAA
TTTACAGCTCATCACAGAAATCATCAGCTATACATTAGTAAAAATAAGGACATGAGGTTTTCTTTCTTGGTTTTTGTCCAAGATCTTTGC
ACCTTAATATTAATGGACTGTTTCAGGTAAAAGAGAATGAATGTATGATTGTGAACTGTGAAGAGAATGATGCAGGATCCTATTTAGTTA
CTGAATAATACAGAGTATTCAATGCATGTTGTATGTGCCACCAAGTTACTATTAACTGTTTTTGGAATTGAAGACTCTGTATAGTCAATA
GTTGTGAAATTCTTCTCAGGCTCCTTAAACCCTCGCTTTGTTGTAAAAGCTAAAATAAACAGCATGCTATATTGTAATTGTATTTCTTGC
TGACCAAATCTACTAAATGCTATTGATTTCTCTCTGATTACTAAAACACATTGTTTATTCTCAGTAGTTTCCCCCAAAATGCTTTTTTCT
TTGCTGAACTTAAATTGAATCAAACCACAAGTTTAAAATCACATGAAAGTGTGTTTCCATGTTGACCTTTGTTTAAAAAAAAAAAAAAGT
GCTTATTTTCTCTGTCGCTAAGCTCCTCCAGTTTTGCTTTTGTCAGAATTAAACTTAACAGTAGAGGTAGTCAGAAAGCTTGCATCAGAC
TGTCCTCATCCAAAACGAAATACTTCATTACCCAATGTTATGATTTCACCATTCTCAGAAAAATTACAGTCCCCTGCCTCCCTGGGTGTA
GTGTCGTGAAGTAGAAAAGCCTTACATAAATAGTAAACATAGAAATTCTTCTGGTGCCCTCTGGCAGCCAGCAGGAGTGGGTCTTGTGAC
TAATCCACATGGAAAGGATAGTGCCTGTCTTTCCTGTTCCCTTGCCATAAGAACCGTGAAATCTCTCCTTTCCCTGCCACTCGTTTACTC
ATCACCTCCTCCCATCACTTCCTTGTCTCTAGACTAGAGGGACCCACAGTTTTAAGAGCTACATCATATCATTTGTTGTTTTAGAAGATT
GTCTTCATCTAAACAAAAACACTAAGAAATCAGTAGATCACTAGATAATGAGTCAGTGTTTTTAGCATCACATTTTACAATTTACAGTTT
TTGTTTGATTCTGTAGCCCATTTTTCTTGAAGGTTAGAATAAGAATCTTCTTGTATTTGAAAACCATCTGCCCTAAATTACATTTAACTA
CAAGAAATGGCTCTCTGCTGGAGAAATTTAAGCTTGTCTTAGTTGTTTGGTAGTGGCTATGGAATGAGAGGTGTTGAGTCTTGTGCCCCT
TCCATGTATTATTTGCTAACTAACTATATTACTAGGCCCTTAATTCCAGCACAGCATGTCTTCTGGTCTATGATAATTGTGTGAGGACTA
AGGCAGAGTGCCTGTTCCCTGCCAACTCTCCACCAGAAAATCATAATCAGAAAGAGTGACTTTGATTTCTGGTACTTGTGATCAAAAGCA
GCTTGTGATTTCTTCACATTTGCAAAATACTCTCTGAGCCAAAAGGCACATACAGTTCTCCAGTGTCTTCCCTTTTAGAGTATACATATT
TGCTGCTTTTCCTTTAGTGTTCACAAAAATCCCAAGGTCAGTTTAGTGTGGCTGAGTTGTTGTTATCTGGACCCTAAACAATCATTACCA
CCTGTAGACAGTTCTTACCTACCCCTCTCCTCCACAATCCTAGTCCATTTGGAGGCAACTATCCTGTGGCCTCCAAGTGAATAAATCTTT
CTTACACTTACTTACGTGATATTTTCTATCATAATTATCTCTCTCATTTCTTCCAATAGTAATAGCGGTAATATTGTTCCATTGAATATC
TATGCACCTAGCTCATCTCTTAGAAACATCCCACATAGTAGCATCGTATTACTCTCTGGTAAAAAGAAAGATTAAATTAAAAGGACTCTA
CACAGTGCTGAATTTCCTGCACCTAAATTATTCAGTTATCACTTGCCAGTATTAGTTGATCCTTCAGGCTATGCCAAGTGCCCCCTCATG
TAGGCCTCTGTATTAAAAAGATTGGGACAAAATACTTGATTAGTTTGCCTGTAGAAGCTCAAAGTGTGTACCAAATACATTGACAGTGGA
TGCTTTCATGGCTCAGCCAACACAGTTCAGAGGAATCTTTTCGGCTTCCAGGGCATTGCTTGTTACCTTTTGTCAGGATCAACCCAAATC
CTCAGGGATGCTGTTTTTCCACACTGTAAGTCCTAACTCATTAGTGGGTCATGAAATCAACTTAACAGCTCAAGACCAGTATATTTTAAA
CGTGAAATAATAAAAAATAGAGGAACAATAGAGCATATAAAATGGTTAAGTATTGGTTCCTGAAATACTGTTTCAGCTAAATATTCTATT
TACTGTGTATACTGGGTCACAATATAAAGTGTTTCCTGTTATGAAATGCAATTTAAAAAAAGAAAGCTTGAAAGACTGCTGCAGGAGGCA
CCGGCCATCCAGTGATTGTTGGAAGAGTCTGGATTGTGTGGAGCCTGACCTTAGATAAGGAGCAGCAGATCCACAACTCAGGAAGTCTAG
AGATGCTTAGCACTTCTTCTTTTGAGTGAGAAGATGGAATCACTCTTGGTTTCTAAAATATTTTTCTTCTCTGCTGTGTATCGGGCAACC
TCACATGATTCAGTGGGACCAGAAAAAGCATAGAAAAATTAGATCCACACACAGCACCCAAAAAAGGCCATAGTCTTTTGTTTACCTAGA
TGTATTTTAACCTCTTTACCACTAAGCATTTTACTATAATAGAACTGGGGACATACATTGTCCTTTTGAGTCCGTTGAATCTGCACCATC
TACCTTTTGGCTGATTCACCATACAGGTGGCAAAGGCCTTTAAAAATGGGGAGCTAATACGTAGGGCACATTCTGGTAGGGCCAAAATAT
TCAGTGTCTGGGGGGTGCTATGCAAATATCAATGACTTTTTACTAAAAACAGTGGATTTCCTCATTTCTTTAAGATCCAAGTAGAAAATG
TAAATAACTTACATTCTGTATGCAGGACTCAATACAGACTTAGTCAATCTGATTTTTTTTGGTGCTTTTCAGTATAGCGCAACTCTAAAA
GGAAACCCATTCACCCTCCTTAGTCCTTTGAAGTATACTTTTGAAATTATACCTTATTGTTAATGGCAACCTAATCAAGCTAGGATTTGT
CGGTTAAAATTTTGATTCTTGTAATCTGTACTGTCAATTTTTGGCCACTCTGGCTGTTACAGCAAACTTTTCTCCCACTGTCATAATTGG
TCTAAAGTAGTATTTGTTTCAGGACTATCCAAAAAGCAAGGCCAGCACATTGAGAAGATGCAGAATCCTACTCTATTACAAACCTCACTC
ATGTTTCTTTTATTGAAACCTTTTTCTACTTTATATTTCCTCTTTTGTAAATTTTTCCATGTCATTTAAAAAATTTTTTACTTTAGAATT
ACAGATTAGTTCTTTTTTTAAAGCATTATGGCATTTTCAAAAAAAAAATTATTTTGGTTACCCAAAAAGCTATACAAGAAATATAACTTC
AATTTTTTAGGTTGATATGGGTATATTTTTAAAGTTTTTATTACTTTATACAAATACAAATTAATTTATATTATAGTTTAACACCTGCTA
TGATGATAGATATCACACTGCTATGATAGAAAATCCCTGTCTGTCATTGAACTATTCATTTAGTGTTACTCTGATATGTTAATAATGTAT
TCCTTCTAATGAAGTCCTTGTAACAAGAAACCCTGTGAGATTGGTATAATGAGATATCAAATAATCAGAAGTATAATTAAAATAGAACAT
GTTGGAAAATCCCAACATTTCCTGTTATGCCGTCATACCTCCGGTGTTCAGTTTGTTACTCAAAAGTTCCCAGTTCTTAGGCTGAAAAAC
ATTCAAGTAAAAATGTAGCATAGATTACACTGAAATATTTTCAGTATCAATGATTTAATATCCACACAAACTATTAGGAATGGTATCTGG
AACTTGTTACAAGGTCAGATAAACTGTTACAGAATTTTAGAAATAATTATCTCTGTATGTGACTGTGTATTACATATAAAAATGAATTTT
TCAGGAAAAGTGCACTTTAAAAATACTTTCTCTTGCTAGTTTTTTAAATTGATGAAATAGCCTGTGCTGCTTTGGAATGCTTATTCTTTC
TTTGATGAAAATACGGTCATTGATTATGATAATTTTAAAAATATCTATTTCTGCATCGCTGCAGGATTTCCTACACTTTTCTGTTCCTCA
TCCCTCTTTTATGTGTGCTTGGCTCAGTTGCCTGTTACACAGCCTCTGCCTTGGTTTTGTGTATTCTAAGATAATTTATAAACACAGATA
TTTACAGTGAAGTTCTTCCTTTTGAAACTAATCTTATTCTTTTATTCCTCTCTCTAAAAATTGGTTGGCCATGCTCACTAATGATTTTTT
TTCTTAACAATAAGCATTTCTTGGTATTGGTAGATTTGGATTGCATGGTAAGATGACTGCCCATTTTCACCATGTATACCTTTGTCAAAT

>In-frame_ENST00000541971_ENST00000360280_TCGA-IN-8462-11A_MLF1IP_chr4_185637551_-_VPS13A_chr9_79910458_length(amino acids)=2211AA_start in transcript=0_stop in transcript=6635
MAPRGRRRPRPHRSEGARRSKNTLERTHSMKDKAGQKCKPIDVFDFPDNSDVSSIGRLGENEKDEETYETFDPPLHSTAIYADEEEFSKH
CGLSLSSTPPGKEAKRSSDTSGNEASEIESVKISAKKPGRKLRPISDDSESIEESDTRRKVKSAEKISTQRHEVIRTTASSELSEKPAES
VTSKKTGPLSAQPSVEKENLAIESQSAFIDNFQAAKQALAEATVQAAGMAATGVKELAQRSSRMALDINIKAPVVVIPQSPVSENVFVAD
FGLITMTNTFHMITESQSSPPPVIDLITIKLSEMRLYRSRFINDAYQEVLDLLLPLNLEVVVERNLCWEWYQEVPCFNVNAQLKPMEFIL
SQEDITTIFKTLHGNIWYEKDGSASPAVTKDQYSATSGVTTNASHHSGGATVVTAAVVEVHSRALLVKTTLNISFKTDDLTMVLYSPGPK
QASFTDVRDPSLKLAEFKLENIISTLKMYTDGSTFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMMDIKYRKVRDGCVTDAVFQ
EMYICASVEFLQTVANVFLEAYTTGTAVETSVQTWTAKEEVPTQESVKWEINVIIKNPEIVFVADMTKNDAPALVITTQCEICYKGNLEN
STMTAAIKDLQVRACPFLPVKRKGKITTVLQPCDLFYQTTQKGTDPQVIDMSVKSLTLKVSPVIINTMITITSALYTTKETIPEETASST
AHLWEKKDTKTLKMWFLEESNETEKIAPTTELVPKGEMIKMNIDSIFIVLEAGIGHRTVPMLLAKSRFSGEGKNWSSLINLHCQLELEVH
YYNEMFGVWEPLLEPLEIDQTEDFRPWNLGIKMKKKAKMAIVESDPEEENYKVPEYKTVISFHSKDQLNITLSKCGLVMLNNLVKAFTEA
ATGSSADFVKDLAPFMILNSLGLTISVSPSDSFSVLNIPMAKSYVLKNGESLSMDYIRTKDNDHFNAMTSLSSKLFFILLTPVNHSTADK
IPLTKVGRRLYTVRHRESGVERSIVCQIDTVEGSKKVTIRSPVQIRNHFSVPLSVYEGDTLLGTASPENEFNIPLGSYRSFIFLKPEDEN
YQMCEGIDFEEIIKNDGALLKKKCRSKNPSKESFLINIVPEKDNLTSLSVYSEDGWDLPYIMHLWPPILLRNLLPYKIAYYIEGIENSVF
TLSEGHSAQICTAQLGKARLHLKLLDYLNHDWKSEYHIKPNQQDISFVSFTCVTEMEKTDLDIAVHMTYNTGQTVVAFHSPYWMVNKTGR
MLQYKADGIHRKHPPNYKKPVLFSFQPNHFFNNNKVQLMVTDSELSNQFSIDTVGSHGAVKCKGLKMDYQVGVTIDLSSFNITRIVTFTP
FYMIKNKSKYHISVAEEGNDKWLSLDLEQCIPFWPEYASSKLLIQVERSEDPPKRIYFNKQENCILLRLDNELGGIIAEVNLAEHSTVIT
FLDYHDGAATFLLINHTKNELVQYNQSSLSEIEDSLPPGKAVFYTWADPVGSRRLKWRCRKSHGEVTQKDDMMMPIDLGEKTIYLVSFFE
GLQRIILFTEDPRVFKVTYESEKAELAEQEIAVALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVKHTEKLEREFKE
YTESSPSEDKVIQLDTNVPVRLTPTGHNMKILQPHVIALRRNYLPALKVEYNTSAHQSSFRIQIYRIQIQNQIHGAVFPFVFYPVKPPKS
VTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLRLDLGFIYALTDLMTEAEVTENTEVELFHKDIEAFKEEYKTASLVDQSQV
SLYEYFHISPIKLHLSVSLSSGREEAKDSKQNGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNYQFHTTSDLQSEVIRHYSKQAI
KQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITGAMAKGVAAMTMDEDYQQ
KRREAMNKQPAGFREGITRGGKGLVSGFVSGITGIVTKPIKGAQKGGAAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKRATETSEV
ESLRPPRFFNEDGVIRPYRLRDGTGNQMLQVMENGRFAKYKYFTHVMINKTDMLMITRRGVLFVTKGTFGQLTCEWQYSFDEFTKEPFIV

--------------------------------------------------------------
>In-frame_ENST00000541971_ENST00000357409_TCGA-IN-8462-11A_MLF1IP_chr4_185637551_-_VPS13A_chr9_79910458_length(transcript)=6907nt_BP=618nt
ATGGCCCCGCGGGGGCGGCGGCGGCCGCGGCCTCACAGGTCTGAGGGCGCAAGACGTTCAAAGAACACTTTAGAAAGAACACATTCCATG
AAAGATAAAGCTGGTCAAAAGTGCAAGCCTATTGACGTGTTCGACTTTCCTGATAATTCTGATGTCTCAAGCATTGGCAGGCTGGGTGAA
AATGAGAAAGATGAAGAAACTTATGAGACCTTTGATCCTCCTTTACATAGCACAGCTATATATGCTGATGAAGAAGAATTCTCCAAACAT
TGTGGACTGTCTCTCTCTTCAACTCCTCCAGGAAAAGAAGCAAAAAGAAGTTCAGACACTTCTGGAAATGAAGCAAGTGAAATCGAATCT
GTAAAAATTAGTGCAAAAAAGCCAGGAAGAAAGCTCAGGCCCATTAGTGATGACTCTGAAAGCATTGAAGAAAGTGATACAAGGAGAAAA
GTTAAATCAGCAGAGAAAATAAGTACACAACGTCATGAGGTTATTCGAACCACAGCGTCTTCAGAACTTTCAGAGAAACCAGCTGAGTCT
GTCACTTCTAAAAAGACAGGACCCCTTAGTGCCCAGCCCTCTGTTGAAAAAGAGAACTTGGCAATAGAAAGTCAATCGGCTTTTATAGAT
AATTTTCAGGCAGCTAAACAAGCCTTGGCTGAGGCAACTGTTCAGGCAGCTGGAATGGCTGCTACTGGTGTAAAAGAACTCGCACAAAGG
AGTTCCAGAATGGCACTGGATATTAACATCAAAGCCCCAGTTGTGGTCATCCCGCAGTCTCCAGTTTCTGAAAATGTTTTTGTTGCTGAT
TTTGGACTAATTACAATGACAAATACCTTTCATATGATAACAGAGAGCCAGAGCTCTCCCCCACCTGTTATTGATTTGATAACAATAAAG
CTGAGTGAAATGCGACTATACAGATCTCGATTTATTAATGATGCATACCAGGAAGTACTGGATCTACTCCTGCCATTAAATCTTGAGGTT
GTGGTTGAACGAAATTTATGCTGGGAGTGGTACCAGGAAGTTCCTTGTTTTAATGTAAATGCTCAGCTGAAACCAATGGAGTTCATTCTT
AGTCAAGAAGATATAACAACTATTTTTAAAACATTGCATGGCAATATATGGTATGAAAAAGATGGTAGTGCCTCACCTGCTGTAACAAAA
GACCAATACAGTGCCACTAGTGGAGTTACTACTAATGCTTCACACCATTCAGGAGGAGCAACTGTGGTGACAGCTGCTGTGGTAGAAGTA
CATTCACGTGCCTTACTAGTTAAGACAACACTAAACATAAGCTTCAAAACTGATGATCTCACCATGGTGCTGTATAGTCCAGGTCCTAAA
CAGGCTTCCTTTACAGATGTTCGTGATCCTTCTCTGAAACTTGCTGAATTTAAATTGGAGAATATTATAAGTACTTTAAAAATGTATACA
GATGGCTCAACATTTTCTTCCTTCTCATTAAAAAACTGTATTTTAGATGATAAAAGACCTCATGTCAAGAAAGCAACTCCTCGAATGATA
GGACTGACAGTTGGTTTTGACAAAAAAGACATGATGGATATAAAGTACAGGAAAGTCAGAGATGGTTGTGTGACTGATGCGGTCTTTCAA
GAAATGTATATTTGTGCAAGCGTAGAATTTCTGCAGACTGTTGCAAATGTCTTTCTTGAGGCCTACACCACAGGCACTGCTGTAGAAACC
AGTGTGCAAACATGGACTGCTAAGGAAGAAGTACCTACACAGGAATCAGTGAAGTGGGAAATTAATGTTATTATTAAAAATCCTGAAATT
GTGTTTGTAGCTGACATGACAAAAAATGATGCTCCTGCTTTAGTCATTACAACACAATGTGAAATTTGCTATAAAGGTAACCTTGAAAAT
AGTACAATGACTGCTGCCATTAAAGATCTCCAAGTGAGAGCCTGCCCGTTTCTTCCAGTCAAGAGAAAAGGCAAAATCACTACTGTTTTG
CAGCCCTGTGACTTGTTTTATCAAACTACTCAGAAAGGTACAGATCCACAAGTGATCGATATGTCAGTAAAATCCCTGACACTAAAGGTT
TCACCAGTTATTATAAATACTATGATTACCATAACTTCAGCACTGTATACAACTAAGGAAACCATCCCAGAAGAAACGGCTTCTTCTACT
GCACATTTATGGGAAAAGAAGGATACAAAGACTTTAAAAATGTGGTTTCTTGAAGAATCAAATGAAACTGAAAAAATAGCTCCCACAACT
GAATTGGTACCCAAAGGCGAGATGATAAAAATGAACATTGATTCTATTTTTATAGTTCTTGAGGCTGGAATTGGTCATAGAACAGTACCT
ATGCTTCTGGCAAAGTCACGTTTTTCAGGGGAAGGCAAAAACTGGAGTTCCCTAATAAATCTGCACTGTCAGCTTGAGCTAGAAGTGCAT
TATTATAATGAAATGTTTGGTGTATGGGAGCCTTTGCTTGAACCCTTAGAAATTGATCAGACTGAGGATTTTAGACCATGGAATCTTGGT
ATCAAGATGAAAAAGAAAGCAAAAATGGCCATTGTTGAGTCAGATCCTGAAGAAGAAAACTACAAAGTGCCAGAATATAAAACTGTCATC
AGTTTCCATTCAAAAGACCAATTAAACATTACATTATCCAAATGTGGTCTTGTAATGTTAAACAATTTAGTCAAGGCATTTACAGAAGCT
GCCACTGGATCTTCAGCTGACTTCGTAAAGGATCTAGCACCATTTATGATTTTAAATTCCCTTGGACTTACTATTTCTGTTTCGCCAAGT
GATTCTTTTAGTGTACTCAACATTCCTATGGCAAAATCATATGTATTGAAAAATGGAGAAAGTTTAAGTATGGATTATATCCGAACCAAG
GACAATGATCATTTCAATGCAATGACCAGCCTAAGCAGCAAACTCTTCTTCATTCTTCTTACACCTGTTAACCATTCTACTGCTGATAAG
ATTCCTTTAACAAAAGTGGGACGACGTCTGTACACTGTAAGACACAGAGAGTCTGGCGTTGAAAGATCTATTGTTTGTCAAATTGATACA
GTAGAAGGAAGTAAGAAGGTCACAATTCGCTCCCCAGTGCAGATAAGAAATCATTTTTCAGTCCCACTGTCTGTTTACGAAGGGGATACC
TTATTGGGAACTGCCTCACCTGAAAATGAATTCAACATACCATTAGGATCTTACCGATCATTCATTTTTCTGAAGCCAGAAGATGAGAAC
TATCAAATGTGTGAAGGAATTGACTTTGAAGAGATTATAAAAAATGATGGTGCTCTTCTAAAGAAGAAATGTAGATCTAAAAACCCTTCT
AAGGAATCATTTCTCATTAATATTGTTCCAGAAAAAGATAATTTAACATCTCTATCAGTGTATTCAGAAGATGGTTGGGATTTACCATAC
ATAATGCATTTGTGGCCACCTATCCTGCTCCGAAATCTTCTTCCTTACAAAATTGCTTATTATATAGAGGGAATTGAAAATTCGGTTTTT
ACTCTAAGTGAAGGACATTCAGCCCAGATTTGTACTGCACAGTTGGGTAAAGCCAGGCTACATTTAAAATTACTTGACTATCTCAATCAC
GATTGGAAAAGTGAATATCACATAAAGCCTAATCAGCAAGACATTAGTTTTGTCAGTTTTACTTGTGTTACAGAAATGGAAAAGACTGAT
TTAGATATTGCTGTCCATATGACTTACAATACTGGTCAGACAGTTGTGGCATTTCATAGTCCTTATTGGATGGTCAATAAAACTGGCCGC
ATGTTACAGTACAAAGCAGACGGAATTCATCGAAAGCATCCACCTAATTATAAAAAGCCAGTTCTCTTTTCTTTTCAGCCAAATCACTTT
TTTAATAACAATAAGGTTCAACTTATGGTAACTGATAGTGAGTTGTCCAATCAGTTTTCAATTGATACTGTTGGTAGTCATGGAGCTGTT
AAATGTAAAGGCCTGAAAATGGACTATCAAGTTGGTGTCACTATAGACCTGAGCAGTTTTAACATTACTAGAATTGTGACATTTACCCCT
TTTTATATGATTAAAAACAAAAGCAAATACCATATATCAGTGGCTGAAGAAGGAAATGATAAATGGCTCTCTCTTGATTTGGAGCAGTGT
ATCCCCTTTTGGCCTGAGTATGCTTCTAGTAAACTTCTTATTCAAGTCGAAAGGAGTGAAGATCCTCCCAAAAGGATATATTTTAACAAG
CAGGAAAATTGTATTCTATTGCGTCTAGATAACGAGCTTGGAGGTATTATAGCAGAAGTGAATTTGGCCGAGCATTCTACAGTTATTACA
TTTTTAGATTATCATGATGGAGCAGCTACATTCCTCTTAATAAATCACACAAAGAATGAACTTGTTCAATACAATCAAAGTTCTCTCAGT
GAAATAGAAGATTCCCTCCCTCCTGGTAAAGCCGTGTTTTATACATGGGCTGATCCGGTGGGCTCTAGAAGGCTGAAGTGGAGATGTAGA
AAAAGCCATGGTGAAGTAACACAGAAGGATGATATGATGATGCCTATAGATTTGGGGGAAAAGACAATATATTTAGTTTCATTCTTTGAA
GGTTTACAACGCATTATTTTATTCACTGAAGATCCAAGGGTATTTAAAGTAACATATGAAAGTGAGAAAGCAGAGTTAGCAGAGCAAGAA
ATTGCAGTGGCATTACAAGATGTTGGAATTTCTCTTGTCAACAATTACACGAAGCAAGAAGTAGCCTATATAGGCATTACAAGTTCTGAT
GTGGTTTGGGAAACAAAGCCCAAGAAGAAGGCAAGATGGAAGCCAATGAGTGTAAAGCACACTGAGAAGTTAGAGAGAGAATTTAAGGAA
TATACTGAATCTTCTCCTTCAGAAGATAAGGTTATTCAGTTGGACACTAATGTTCCGGTTCGCCTAACCCCTACTGGTCATAACATGAAA
ATTCTGCAGCCGCATGTAATAGCTCTACGAAGAAATTATCTTCCAGCATTAAAAGTGGAATATAACACATCTGCACATCAATCATCATTT
AGAATTCAGATTTACAGAATACAGATCCAAAATCAGATACATGGTGCTGTATTTCCCTTTGTGTTTTATCCTGTTAAACCTCCAAAGTCG
GTCACCATGGATTCAGCACCAAAGCCCTTTACAGATGTCAGTATTGTCATGAGATCTGCAGGACATTCCCAGATATCACGTATTAAGTAT
TTCAAAGTATTGATTCAAGAAATGGATCTCAGGTTAGATCTTGGGTTTATCTATGCTTTAACAGACCTTATGACAGAAGCTGAGGTGACT
GAAAATACAGAGGTTGAGCTTTTTCATAAAGATATAGAAGCTTTCAAAGAAGAATATAAAACAGCCTCATTAGTAGATCAATCACAAGTC
AGCCTCTATGAATATTTTCATATATCTCCTATCAAGTTACATTTAAGTGTTTCACTGAGTTCCGGCAGAGAAGAAGCTAAAGATTCAAAA
CAAAATGGAGGACTGATTCCAGTTCATTCTTTAAATCTTTTGCTGAAGAGTATTGGTGCCACACTGACAGATGTACAAGATGTAGTTTTT
AAGCTTGCATTTTTTGAACTCAACTATCAGTTCCATACAACATCCGATCTACAGTCTGAAGTCATAAGACACTATTCAAAACAGGCCATT
AAGCAGATGTATGTACTCATTCTTGGACTTGATGTTTTGGGAAATCCATTTGGCTTAATTAGAGAATTTTCTGAAGGTGTAGAAGCATTT
TTTTATGAACCTTACCAGGGAGCCATCCAGGGTCCTGAAGAGTTTGTGGAAGGAATGGCACTAGGACTTAAGGCACTAGTTGGTGGAGCT
GTTGGTGGATTGGCTGGTGCTGCCTCCAAAATCACCGGTGCTATGGCTAAGGGGGTAGCAGCTATGACCATGGATGAAGACTACCAACAG
AAGAGAAGAGAAGCCATGAATAAGCAACCAGCTGGTTTTAGAGAAGGCATCACTCGTGGAGGAAAAGGCTTAGTTTCTGGATTTGTTAGT
GGCATAACAGGAATTGTTACAAAACCAATCAAAGGAGCTCAAAAAGGAGGAGCAGCTGGTTTCTTTAAAGGTGTTGGGAAAGGTTTAGTA
GGAGCGGTAGCAAGGCCAACTGGAGGCATCATAGACATGGCTAGCAGTACATTTCAGGGAATAAAAAGAGCTACAGAGACTTCTGAAGTG
GAGAGTCTGCGACCTCCTCGGTTCTTCAATGAAGATGGAGTTATCAGACCGTACAGGTTGAGGGATGGGACTGGAAATCAAATGTTACAG
AAAATTCAATTCTACAGGGAGTGGATTATGACTCACAGTAGCAGTAGTGATGATGATGATGATGATGATGATGATGATGAGTCAGATCTA
AACCATTAAAATTCATATGTTCTTTATTTTACTTGGAATGTTTCATTAACATGTTTTGTATGACTTATACCATAATGCCCATATGTCCAT
TTATAGGGAGGTAAAACACATTTTCTTTTAAAATGTTTTCCTACACATTTTCATAAAGCAAAATAATTGTATTATTTAAGCACAGAAAAA
AATGTATCTTACATCCAAAGTAGGGAGGGCATCCAACATATTATAGATTTGCTTTTATATATTTTATAGCTTTGTATTGCATAGTTTGTC
TTTAAGAGTTCAAGTTAGACTTAAATATAATTTTGATGTTCACTGGTTTTATTTTAAATTGCCTTCTTATTTGTTAGCAAAATGCCTTTT
TTTAATGGTCTCTGTAAATTTTCTGGGCTTTAATGTAATGCCACTGTGTAAAAAAAAAGGAAGAAAATAGTAATAGCCATTTAATGTTTT

>In-frame_ENST00000541971_ENST00000357409_TCGA-IN-8462-11A_MLF1IP_chr4_185637551_-_VPS13A_chr9_79910458_length(amino acids)=2132AA_start in transcript=0_stop in transcript=6398
MAPRGRRRPRPHRSEGARRSKNTLERTHSMKDKAGQKCKPIDVFDFPDNSDVSSIGRLGENEKDEETYETFDPPLHSTAIYADEEEFSKH
CGLSLSSTPPGKEAKRSSDTSGNEASEIESVKISAKKPGRKLRPISDDSESIEESDTRRKVKSAEKISTQRHEVIRTTASSELSEKPAES
VTSKKTGPLSAQPSVEKENLAIESQSAFIDNFQAAKQALAEATVQAAGMAATGVKELAQRSSRMALDINIKAPVVVIPQSPVSENVFVAD
FGLITMTNTFHMITESQSSPPPVIDLITIKLSEMRLYRSRFINDAYQEVLDLLLPLNLEVVVERNLCWEWYQEVPCFNVNAQLKPMEFIL
SQEDITTIFKTLHGNIWYEKDGSASPAVTKDQYSATSGVTTNASHHSGGATVVTAAVVEVHSRALLVKTTLNISFKTDDLTMVLYSPGPK
QASFTDVRDPSLKLAEFKLENIISTLKMYTDGSTFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMMDIKYRKVRDGCVTDAVFQ
EMYICASVEFLQTVANVFLEAYTTGTAVETSVQTWTAKEEVPTQESVKWEINVIIKNPEIVFVADMTKNDAPALVITTQCEICYKGNLEN
STMTAAIKDLQVRACPFLPVKRKGKITTVLQPCDLFYQTTQKGTDPQVIDMSVKSLTLKVSPVIINTMITITSALYTTKETIPEETASST
AHLWEKKDTKTLKMWFLEESNETEKIAPTTELVPKGEMIKMNIDSIFIVLEAGIGHRTVPMLLAKSRFSGEGKNWSSLINLHCQLELEVH
YYNEMFGVWEPLLEPLEIDQTEDFRPWNLGIKMKKKAKMAIVESDPEEENYKVPEYKTVISFHSKDQLNITLSKCGLVMLNNLVKAFTEA
ATGSSADFVKDLAPFMILNSLGLTISVSPSDSFSVLNIPMAKSYVLKNGESLSMDYIRTKDNDHFNAMTSLSSKLFFILLTPVNHSTADK
IPLTKVGRRLYTVRHRESGVERSIVCQIDTVEGSKKVTIRSPVQIRNHFSVPLSVYEGDTLLGTASPENEFNIPLGSYRSFIFLKPEDEN
YQMCEGIDFEEIIKNDGALLKKKCRSKNPSKESFLINIVPEKDNLTSLSVYSEDGWDLPYIMHLWPPILLRNLLPYKIAYYIEGIENSVF
TLSEGHSAQICTAQLGKARLHLKLLDYLNHDWKSEYHIKPNQQDISFVSFTCVTEMEKTDLDIAVHMTYNTGQTVVAFHSPYWMVNKTGR
MLQYKADGIHRKHPPNYKKPVLFSFQPNHFFNNNKVQLMVTDSELSNQFSIDTVGSHGAVKCKGLKMDYQVGVTIDLSSFNITRIVTFTP
FYMIKNKSKYHISVAEEGNDKWLSLDLEQCIPFWPEYASSKLLIQVERSEDPPKRIYFNKQENCILLRLDNELGGIIAEVNLAEHSTVIT
FLDYHDGAATFLLINHTKNELVQYNQSSLSEIEDSLPPGKAVFYTWADPVGSRRLKWRCRKSHGEVTQKDDMMMPIDLGEKTIYLVSFFE
GLQRIILFTEDPRVFKVTYESEKAELAEQEIAVALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVKHTEKLEREFKE
YTESSPSEDKVIQLDTNVPVRLTPTGHNMKILQPHVIALRRNYLPALKVEYNTSAHQSSFRIQIYRIQIQNQIHGAVFPFVFYPVKPPKS
VTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLRLDLGFIYALTDLMTEAEVTENTEVELFHKDIEAFKEEYKTASLVDQSQV
SLYEYFHISPIKLHLSVSLSSGREEAKDSKQNGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNYQFHTTSDLQSEVIRHYSKQAI
KQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITGAMAKGVAAMTMDEDYQQ
KRREAMNKQPAGFREGITRGGKGLVSGFVSGITGIVTKPIKGAQKGGAAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKRATETSEV

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Fusion Gene PPI Analysis for MLF1IP-VPS13A


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for MLF1IP-VPS13A


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for MLF1IP-VPS13A


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
TgeneVPS13AC0393576Chorea Acanthocytosis Syndrome4CTD_human;GENOMICS_ENGLAND;UNIPROT
TgeneVPS13AC0525045Mood Disorders1PSYGENET