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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:MPV17-SIGIRR (FusionGDB2 ID:54473) |
Fusion Gene Summary for MPV17-SIGIRR |
Fusion gene summary |
Fusion gene information | Fusion gene name: MPV17-SIGIRR | Fusion gene ID: 54473 | Hgene | Tgene | Gene symbol | MPV17 | SIGIRR | Gene ID | 4358 | 59307 |
Gene name | mitochondrial inner membrane protein MPV17 | single Ig and TIR domain containing | |
Synonyms | CMT2EE|MTDPS6|SYM1 | IL-1R8|TIR8 | |
Cytomap | 2p23.3 | 11p15.5 | |
Type of gene | protein-coding | protein-coding | |
Description | protein Mpv17MPV17, mitochondrial inner membrane proteinMpV17 mitochondrial inner membrane proteinMpv17, human homolog of glomerulosclerosis and nephrotic syndrome | single Ig IL-1-related receptorinterleukin-1 receptor 8 long isoformsingle Ig IL-1R-related moleculesingle immunoglobulin and toll-interleukin 1 receptor (TIR) domainsingle immunoglobulin domain IL1R1 relatedsingle immunoglobulin domain-containing IL | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000233545, ENST00000402310, ENST00000380044, ENST00000357186, ENST00000402722, ENST00000405983, ENST00000405076, ENST00000403262, ENST00000399052, | ENST00000431843, ENST00000397632, ENST00000332725, ENST00000531205, ENST00000382520, ENST00000529486, | |
Fusion gene scores | * DoF score | 3 X 2 X 2=12 | 3 X 3 X 2=18 |
# samples | 3 | 4 | |
** MAII score | log2(3/12*10)=1.32192809488736 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(4/18*10)=1.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: MPV17 [Title/Abstract] AND SIGIRR [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | MPV17(27545315)-SIGIRR(406059), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | MPV17-SIGIRR seems lost the major protein functional domain in Tgene partner, which is a IUPHAR drug target due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene breakpoints across MPV17 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across SIGIRR (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | STAD | TCGA-BR-A4QI-01A | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
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Fusion Gene ORF analysis for MPV17-SIGIRR |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000233545 | ENST00000431843 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
In-frame | ENST00000233545 | ENST00000397632 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
In-frame | ENST00000233545 | ENST00000332725 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
Frame-shift | ENST00000233545 | ENST00000531205 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
Frame-shift | ENST00000233545 | ENST00000382520 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
5CDS-intron | ENST00000233545 | ENST00000529486 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
In-frame | ENST00000402310 | ENST00000431843 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
In-frame | ENST00000402310 | ENST00000397632 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
In-frame | ENST00000402310 | ENST00000332725 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
Frame-shift | ENST00000402310 | ENST00000531205 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
Frame-shift | ENST00000402310 | ENST00000382520 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
5CDS-intron | ENST00000402310 | ENST00000529486 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
In-frame | ENST00000380044 | ENST00000431843 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
In-frame | ENST00000380044 | ENST00000397632 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
In-frame | ENST00000380044 | ENST00000332725 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
Frame-shift | ENST00000380044 | ENST00000531205 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
Frame-shift | ENST00000380044 | ENST00000382520 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
5CDS-intron | ENST00000380044 | ENST00000529486 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
intron-3CDS | ENST00000357186 | ENST00000431843 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
intron-3CDS | ENST00000357186 | ENST00000397632 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
intron-3CDS | ENST00000357186 | ENST00000332725 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
intron-3CDS | ENST00000357186 | ENST00000531205 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
intron-3CDS | ENST00000357186 | ENST00000382520 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
intron-intron | ENST00000357186 | ENST00000529486 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
In-frame | ENST00000402722 | ENST00000431843 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
In-frame | ENST00000402722 | ENST00000397632 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
In-frame | ENST00000402722 | ENST00000332725 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
Frame-shift | ENST00000402722 | ENST00000531205 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
Frame-shift | ENST00000402722 | ENST00000382520 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
5CDS-intron | ENST00000402722 | ENST00000529486 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
In-frame | ENST00000405983 | ENST00000431843 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
In-frame | ENST00000405983 | ENST00000397632 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
In-frame | ENST00000405983 | ENST00000332725 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
Frame-shift | ENST00000405983 | ENST00000531205 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
Frame-shift | ENST00000405983 | ENST00000382520 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
5CDS-intron | ENST00000405983 | ENST00000529486 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
In-frame | ENST00000405076 | ENST00000431843 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
In-frame | ENST00000405076 | ENST00000397632 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
In-frame | ENST00000405076 | ENST00000332725 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
Frame-shift | ENST00000405076 | ENST00000531205 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
Frame-shift | ENST00000405076 | ENST00000382520 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
5CDS-intron | ENST00000405076 | ENST00000529486 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
In-frame | ENST00000403262 | ENST00000431843 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
In-frame | ENST00000403262 | ENST00000397632 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
In-frame | ENST00000403262 | ENST00000332725 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
Frame-shift | ENST00000403262 | ENST00000531205 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
Frame-shift | ENST00000403262 | ENST00000382520 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
5CDS-intron | ENST00000403262 | ENST00000529486 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
In-frame | ENST00000399052 | ENST00000431843 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
In-frame | ENST00000399052 | ENST00000397632 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
In-frame | ENST00000399052 | ENST00000332725 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
Frame-shift | ENST00000399052 | ENST00000531205 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
Frame-shift | ENST00000399052 | ENST00000382520 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
5CDS-intron | ENST00000399052 | ENST00000529486 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000233545 | MPV17 | chr2 | 27545315 | - | ENST00000431843 | SIGIRR | chr11 | 406059 | - | 461 | 117 | 114 | 443 | 109 |
ENST00000233545 | MPV17 | chr2 | 27545315 | - | ENST00000397632 | SIGIRR | chr11 | 406059 | - | 461 | 117 | 114 | 443 | 109 |
ENST00000233545 | MPV17 | chr2 | 27545315 | - | ENST00000332725 | SIGIRR | chr11 | 406059 | - | 461 | 117 | 114 | 443 | 109 |
ENST00000402310 | MPV17 | chr2 | 27545315 | - | ENST00000431843 | SIGIRR | chr11 | 406059 | - | 422 | 78 | 75 | 404 | 109 |
ENST00000402310 | MPV17 | chr2 | 27545315 | - | ENST00000397632 | SIGIRR | chr11 | 406059 | - | 422 | 78 | 75 | 404 | 109 |
ENST00000402310 | MPV17 | chr2 | 27545315 | - | ENST00000332725 | SIGIRR | chr11 | 406059 | - | 422 | 78 | 75 | 404 | 109 |
ENST00000380044 | MPV17 | chr2 | 27545315 | - | ENST00000431843 | SIGIRR | chr11 | 406059 | - | 470 | 126 | 123 | 452 | 109 |
ENST00000380044 | MPV17 | chr2 | 27545315 | - | ENST00000397632 | SIGIRR | chr11 | 406059 | - | 470 | 126 | 123 | 452 | 109 |
ENST00000380044 | MPV17 | chr2 | 27545315 | - | ENST00000332725 | SIGIRR | chr11 | 406059 | - | 470 | 126 | 123 | 452 | 109 |
ENST00000402722 | MPV17 | chr2 | 27545315 | - | ENST00000431843 | SIGIRR | chr11 | 406059 | - | 449 | 105 | 102 | 431 | 109 |
ENST00000402722 | MPV17 | chr2 | 27545315 | - | ENST00000397632 | SIGIRR | chr11 | 406059 | - | 449 | 105 | 102 | 431 | 109 |
ENST00000402722 | MPV17 | chr2 | 27545315 | - | ENST00000332725 | SIGIRR | chr11 | 406059 | - | 449 | 105 | 102 | 431 | 109 |
ENST00000405983 | MPV17 | chr2 | 27545315 | - | ENST00000431843 | SIGIRR | chr11 | 406059 | - | 431 | 87 | 84 | 413 | 109 |
ENST00000405983 | MPV17 | chr2 | 27545315 | - | ENST00000397632 | SIGIRR | chr11 | 406059 | - | 431 | 87 | 84 | 413 | 109 |
ENST00000405983 | MPV17 | chr2 | 27545315 | - | ENST00000332725 | SIGIRR | chr11 | 406059 | - | 431 | 87 | 84 | 413 | 109 |
ENST00000405076 | MPV17 | chr2 | 27545315 | - | ENST00000431843 | SIGIRR | chr11 | 406059 | - | 470 | 126 | 123 | 452 | 109 |
ENST00000405076 | MPV17 | chr2 | 27545315 | - | ENST00000397632 | SIGIRR | chr11 | 406059 | - | 470 | 126 | 123 | 452 | 109 |
ENST00000405076 | MPV17 | chr2 | 27545315 | - | ENST00000332725 | SIGIRR | chr11 | 406059 | - | 470 | 126 | 123 | 452 | 109 |
ENST00000403262 | MPV17 | chr2 | 27545315 | - | ENST00000431843 | SIGIRR | chr11 | 406059 | - | 435 | 91 | 88 | 417 | 109 |
ENST00000403262 | MPV17 | chr2 | 27545315 | - | ENST00000397632 | SIGIRR | chr11 | 406059 | - | 435 | 91 | 88 | 417 | 109 |
ENST00000403262 | MPV17 | chr2 | 27545315 | - | ENST00000332725 | SIGIRR | chr11 | 406059 | - | 435 | 91 | 88 | 417 | 109 |
ENST00000399052 | MPV17 | chr2 | 27545315 | - | ENST00000431843 | SIGIRR | chr11 | 406059 | - | 465 | 121 | 118 | 447 | 109 |
ENST00000399052 | MPV17 | chr2 | 27545315 | - | ENST00000397632 | SIGIRR | chr11 | 406059 | - | 465 | 121 | 118 | 447 | 109 |
ENST00000399052 | MPV17 | chr2 | 27545315 | - | ENST00000332725 | SIGIRR | chr11 | 406059 | - | 465 | 121 | 118 | 447 | 109 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000233545 | ENST00000431843 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - | 0.65700436 | 0.34299564 |
ENST00000233545 | ENST00000397632 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - | 0.65700436 | 0.34299564 |
ENST00000233545 | ENST00000332725 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - | 0.65700436 | 0.34299564 |
ENST00000402310 | ENST00000431843 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - | 0.588387 | 0.41161302 |
ENST00000402310 | ENST00000397632 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - | 0.588387 | 0.41161302 |
ENST00000402310 | ENST00000332725 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - | 0.588387 | 0.41161302 |
ENST00000380044 | ENST00000431843 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - | 0.52852947 | 0.47147056 |
ENST00000380044 | ENST00000397632 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - | 0.52852947 | 0.47147056 |
ENST00000380044 | ENST00000332725 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - | 0.52852947 | 0.47147056 |
ENST00000402722 | ENST00000431843 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - | 0.57009083 | 0.42990917 |
ENST00000402722 | ENST00000397632 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - | 0.57009083 | 0.42990917 |
ENST00000402722 | ENST00000332725 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - | 0.57009083 | 0.42990917 |
ENST00000405983 | ENST00000431843 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - | 0.60416985 | 0.3958302 |
ENST00000405983 | ENST00000397632 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - | 0.60416985 | 0.3958302 |
ENST00000405983 | ENST00000332725 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - | 0.60416985 | 0.3958302 |
ENST00000405076 | ENST00000431843 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - | 0.52852947 | 0.47147056 |
ENST00000405076 | ENST00000397632 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - | 0.52852947 | 0.47147056 |
ENST00000405076 | ENST00000332725 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - | 0.52852947 | 0.47147056 |
ENST00000403262 | ENST00000431843 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - | 0.5631207 | 0.43687922 |
ENST00000403262 | ENST00000397632 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - | 0.5631207 | 0.43687922 |
ENST00000403262 | ENST00000332725 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - | 0.5631207 | 0.43687922 |
ENST00000399052 | ENST00000431843 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - | 0.5526677 | 0.44733226 |
ENST00000399052 | ENST00000397632 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - | 0.5526677 | 0.44733226 |
ENST00000399052 | ENST00000332725 | MPV17 | chr2 | 27545315 | - | SIGIRR | chr11 | 406059 | - | 0.5526677 | 0.44733226 |
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Fusion Genomic Features for MPV17-SIGIRR |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for MPV17-SIGIRR |
Go to FGviewer for the breakpoints of chr2:27545315-chr11:406059 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | MPV17 | chr2:27545315 | chr11:406059 | ENST00000233545 | - | 1 | 7 | 131_151 | 23.333333333333332 | 177.0 | Transmembrane | Helical |
Hgene | MPV17 | chr2:27545315 | chr11:406059 | ENST00000233545 | - | 1 | 7 | 18_38 | 23.333333333333332 | 177.0 | Transmembrane | Helical |
Hgene | MPV17 | chr2:27545315 | chr11:406059 | ENST00000233545 | - | 1 | 7 | 53_73 | 23.333333333333332 | 177.0 | Transmembrane | Helical |
Hgene | MPV17 | chr2:27545315 | chr11:406059 | ENST00000233545 | - | 1 | 7 | 94_114 | 23.333333333333332 | 177.0 | Transmembrane | Helical |
Hgene | MPV17 | chr2:27545315 | chr11:406059 | ENST00000380044 | - | 2 | 8 | 131_151 | 23.333333333333332 | 177.0 | Transmembrane | Helical |
Hgene | MPV17 | chr2:27545315 | chr11:406059 | ENST00000380044 | - | 2 | 8 | 18_38 | 23.333333333333332 | 177.0 | Transmembrane | Helical |
Hgene | MPV17 | chr2:27545315 | chr11:406059 | ENST00000380044 | - | 2 | 8 | 53_73 | 23.333333333333332 | 177.0 | Transmembrane | Helical |
Hgene | MPV17 | chr2:27545315 | chr11:406059 | ENST00000380044 | - | 2 | 8 | 94_114 | 23.333333333333332 | 177.0 | Transmembrane | Helical |
Tgene | SIGIRR | chr2:27545315 | chr11:406059 | ENST00000332725 | 8 | 10 | 163_307 | 356.3333333333333 | 411.0 | Domain | TIR | |
Tgene | SIGIRR | chr2:27545315 | chr11:406059 | ENST00000332725 | 8 | 10 | 9_109 | 356.3333333333333 | 411.0 | Domain | Note=Ig-like C2-type | |
Tgene | SIGIRR | chr2:27545315 | chr11:406059 | ENST00000397632 | 8 | 10 | 163_307 | 356.3333333333333 | 411.0 | Domain | TIR | |
Tgene | SIGIRR | chr2:27545315 | chr11:406059 | ENST00000397632 | 8 | 10 | 9_109 | 356.3333333333333 | 411.0 | Domain | Note=Ig-like C2-type | |
Tgene | SIGIRR | chr2:27545315 | chr11:406059 | ENST00000431843 | 8 | 10 | 163_307 | 356.3333333333333 | 411.0 | Domain | TIR | |
Tgene | SIGIRR | chr2:27545315 | chr11:406059 | ENST00000431843 | 8 | 10 | 9_109 | 356.3333333333333 | 411.0 | Domain | Note=Ig-like C2-type | |
Tgene | SIGIRR | chr2:27545315 | chr11:406059 | ENST00000332725 | 8 | 10 | 140_410 | 356.3333333333333 | 411.0 | Topological domain | Cytoplasmic | |
Tgene | SIGIRR | chr2:27545315 | chr11:406059 | ENST00000332725 | 8 | 10 | 1_118 | 356.3333333333333 | 411.0 | Topological domain | Extracellular | |
Tgene | SIGIRR | chr2:27545315 | chr11:406059 | ENST00000397632 | 8 | 10 | 140_410 | 356.3333333333333 | 411.0 | Topological domain | Cytoplasmic | |
Tgene | SIGIRR | chr2:27545315 | chr11:406059 | ENST00000397632 | 8 | 10 | 1_118 | 356.3333333333333 | 411.0 | Topological domain | Extracellular | |
Tgene | SIGIRR | chr2:27545315 | chr11:406059 | ENST00000431843 | 8 | 10 | 140_410 | 356.3333333333333 | 411.0 | Topological domain | Cytoplasmic | |
Tgene | SIGIRR | chr2:27545315 | chr11:406059 | ENST00000431843 | 8 | 10 | 1_118 | 356.3333333333333 | 411.0 | Topological domain | Extracellular | |
Tgene | SIGIRR | chr2:27545315 | chr11:406059 | ENST00000332725 | 8 | 10 | 119_139 | 356.3333333333333 | 411.0 | Transmembrane | Helical%3B Signal-anchor for type III membrane protein | |
Tgene | SIGIRR | chr2:27545315 | chr11:406059 | ENST00000397632 | 8 | 10 | 119_139 | 356.3333333333333 | 411.0 | Transmembrane | Helical%3B Signal-anchor for type III membrane protein | |
Tgene | SIGIRR | chr2:27545315 | chr11:406059 | ENST00000431843 | 8 | 10 | 119_139 | 356.3333333333333 | 411.0 | Transmembrane | Helical%3B Signal-anchor for type III membrane protein |
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Fusion Gene Sequence for MPV17-SIGIRR |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000233545_ENST00000431843_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(transcript)=461nt_BP=117nt GAGGGACGGTGGGGGTGACCCCCTCTCCTCTTGGCTTGACAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACC CGTGGAAAGTACAGGTCCTGACAGCTGGTGTCCGGGGGCCTGTCTTTGGAGAGCCATCAGCTCCACCGCACACCAGTGGGGTCTCGCTGG GAGAGAGCCGGAGCAGCGAAGTGGACGTCTCGGATCTCGGCTCGCGAAACTACAGTGCCCGCACAGACTTCTACTGCCTGGTGTCCAAGG ATGATATGTAGCTCCCACCCCAGAGTGCAGGATCATAGGGACAGCGGGGGCCAGGGCAGCGGCGTCGCTCCTCTGCTCAACAGGACCACA ACCCCTGCCAGCAGCCCTGGGACCCTGCCAGCAGCCCTGGGAAAAGGCTGTGGCCTCAGGGCGCCTCCCAGTGCCAGAAAATAAAGTCCT >In-frame_ENST00000233545_ENST00000431843_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(amino acids)=109AA_start in transcript=114_stop in transcript=443 MVSGGLSLESHQLHRTPVGSRWERAGAAKWTSRISARETTVPAQTSTAWCPRMICSSHPRVQDHRDSGGQGSGVAPLLNRTTTPASSPGT -------------------------------------------------------------- >In-frame_ENST00000233545_ENST00000397632_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(transcript)=461nt_BP=117nt GAGGGACGGTGGGGGTGACCCCCTCTCCTCTTGGCTTGACAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACC CGTGGAAAGTACAGGTCCTGACAGCTGGTGTCCGGGGGCCTGTCTTTGGAGAGCCATCAGCTCCACCGCACACCAGTGGGGTCTCGCTGG GAGAGAGCCGGAGCAGCGAAGTGGACGTCTCGGATCTCGGCTCGCGAAACTACAGTGCCCGCACAGACTTCTACTGCCTGGTGTCCAAGG ATGATATGTAGCTCCCACCCCAGAGTGCAGGATCATAGGGACAGCGGGGGCCAGGGCAGCGGCGTCGCTCCTCTGCTCAACAGGACCACA ACCCCTGCCAGCAGCCCTGGGACCCTGCCAGCAGCCCTGGGAAAAGGCTGTGGCCTCAGGGCGCCTCCCAGTGCCAGAAAATAAAGTCCT >In-frame_ENST00000233545_ENST00000397632_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(amino acids)=109AA_start in transcript=114_stop in transcript=443 MVSGGLSLESHQLHRTPVGSRWERAGAAKWTSRISARETTVPAQTSTAWCPRMICSSHPRVQDHRDSGGQGSGVAPLLNRTTTPASSPGT -------------------------------------------------------------- >In-frame_ENST00000233545_ENST00000332725_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(transcript)=461nt_BP=117nt GAGGGACGGTGGGGGTGACCCCCTCTCCTCTTGGCTTGACAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACC CGTGGAAAGTACAGGTCCTGACAGCTGGTGTCCGGGGGCCTGTCTTTGGAGAGCCATCAGCTCCACCGCACACCAGTGGGGTCTCGCTGG GAGAGAGCCGGAGCAGCGAAGTGGACGTCTCGGATCTCGGCTCGCGAAACTACAGTGCCCGCACAGACTTCTACTGCCTGGTGTCCAAGG ATGATATGTAGCTCCCACCCCAGAGTGCAGGATCATAGGGACAGCGGGGGCCAGGGCAGCGGCGTCGCTCCTCTGCTCAACAGGACCACA ACCCCTGCCAGCAGCCCTGGGACCCTGCCAGCAGCCCTGGGAAAAGGCTGTGGCCTCAGGGCGCCTCCCAGTGCCAGAAAATAAAGTCCT >In-frame_ENST00000233545_ENST00000332725_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(amino acids)=109AA_start in transcript=114_stop in transcript=443 MVSGGLSLESHQLHRTPVGSRWERAGAAKWTSRISARETTVPAQTSTAWCPRMICSSHPRVQDHRDSGGQGSGVAPLLNRTTTPASSPGT -------------------------------------------------------------- >In-frame_ENST00000402310_ENST00000431843_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(transcript)=422nt_BP=78nt CAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCTGGTGTCCGGGGGC CTGTCTTTGGAGAGCCATCAGCTCCACCGCACACCAGTGGGGTCTCGCTGGGAGAGAGCCGGAGCAGCGAAGTGGACGTCTCGGATCTCG GCTCGCGAAACTACAGTGCCCGCACAGACTTCTACTGCCTGGTGTCCAAGGATGATATGTAGCTCCCACCCCAGAGTGCAGGATCATAGG GACAGCGGGGGCCAGGGCAGCGGCGTCGCTCCTCTGCTCAACAGGACCACAACCCCTGCCAGCAGCCCTGGGACCCTGCCAGCAGCCCTG >In-frame_ENST00000402310_ENST00000431843_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(amino acids)=109AA_start in transcript=75_stop in transcript=404 MVSGGLSLESHQLHRTPVGSRWERAGAAKWTSRISARETTVPAQTSTAWCPRMICSSHPRVQDHRDSGGQGSGVAPLLNRTTTPASSPGT -------------------------------------------------------------- >In-frame_ENST00000402310_ENST00000397632_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(transcript)=422nt_BP=78nt CAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCTGGTGTCCGGGGGC CTGTCTTTGGAGAGCCATCAGCTCCACCGCACACCAGTGGGGTCTCGCTGGGAGAGAGCCGGAGCAGCGAAGTGGACGTCTCGGATCTCG GCTCGCGAAACTACAGTGCCCGCACAGACTTCTACTGCCTGGTGTCCAAGGATGATATGTAGCTCCCACCCCAGAGTGCAGGATCATAGG GACAGCGGGGGCCAGGGCAGCGGCGTCGCTCCTCTGCTCAACAGGACCACAACCCCTGCCAGCAGCCCTGGGACCCTGCCAGCAGCCCTG >In-frame_ENST00000402310_ENST00000397632_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(amino acids)=109AA_start in transcript=75_stop in transcript=404 MVSGGLSLESHQLHRTPVGSRWERAGAAKWTSRISARETTVPAQTSTAWCPRMICSSHPRVQDHRDSGGQGSGVAPLLNRTTTPASSPGT -------------------------------------------------------------- >In-frame_ENST00000402310_ENST00000332725_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(transcript)=422nt_BP=78nt CAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCTGGTGTCCGGGGGC CTGTCTTTGGAGAGCCATCAGCTCCACCGCACACCAGTGGGGTCTCGCTGGGAGAGAGCCGGAGCAGCGAAGTGGACGTCTCGGATCTCG GCTCGCGAAACTACAGTGCCCGCACAGACTTCTACTGCCTGGTGTCCAAGGATGATATGTAGCTCCCACCCCAGAGTGCAGGATCATAGG GACAGCGGGGGCCAGGGCAGCGGCGTCGCTCCTCTGCTCAACAGGACCACAACCCCTGCCAGCAGCCCTGGGACCCTGCCAGCAGCCCTG >In-frame_ENST00000402310_ENST00000332725_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(amino acids)=109AA_start in transcript=75_stop in transcript=404 MVSGGLSLESHQLHRTPVGSRWERAGAAKWTSRISARETTVPAQTSTAWCPRMICSSHPRVQDHRDSGGQGSGVAPLLNRTTTPASSPGT -------------------------------------------------------------- >In-frame_ENST00000380044_ENST00000431843_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(transcript)=470nt_BP=126nt GCGGAAGTTCCTAGGCCAGCCTGTCACGTGGGAGGGAGGCTCGGCGCTCAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGG CCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCTGGTGTCCGGGGGCCTGTCTTTGGAGAGCCATCAGCTCCACCGCACACCAGTGGGG TCTCGCTGGGAGAGAGCCGGAGCAGCGAAGTGGACGTCTCGGATCTCGGCTCGCGAAACTACAGTGCCCGCACAGACTTCTACTGCCTGG TGTCCAAGGATGATATGTAGCTCCCACCCCAGAGTGCAGGATCATAGGGACAGCGGGGGCCAGGGCAGCGGCGTCGCTCCTCTGCTCAAC AGGACCACAACCCCTGCCAGCAGCCCTGGGACCCTGCCAGCAGCCCTGGGAAAAGGCTGTGGCCTCAGGGCGCCTCCCAGTGCCAGAAAA >In-frame_ENST00000380044_ENST00000431843_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(amino acids)=109AA_start in transcript=123_stop in transcript=452 MVSGGLSLESHQLHRTPVGSRWERAGAAKWTSRISARETTVPAQTSTAWCPRMICSSHPRVQDHRDSGGQGSGVAPLLNRTTTPASSPGT -------------------------------------------------------------- >In-frame_ENST00000380044_ENST00000397632_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(transcript)=470nt_BP=126nt GCGGAAGTTCCTAGGCCAGCCTGTCACGTGGGAGGGAGGCTCGGCGCTCAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGG CCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCTGGTGTCCGGGGGCCTGTCTTTGGAGAGCCATCAGCTCCACCGCACACCAGTGGGG TCTCGCTGGGAGAGAGCCGGAGCAGCGAAGTGGACGTCTCGGATCTCGGCTCGCGAAACTACAGTGCCCGCACAGACTTCTACTGCCTGG TGTCCAAGGATGATATGTAGCTCCCACCCCAGAGTGCAGGATCATAGGGACAGCGGGGGCCAGGGCAGCGGCGTCGCTCCTCTGCTCAAC AGGACCACAACCCCTGCCAGCAGCCCTGGGACCCTGCCAGCAGCCCTGGGAAAAGGCTGTGGCCTCAGGGCGCCTCCCAGTGCCAGAAAA >In-frame_ENST00000380044_ENST00000397632_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(amino acids)=109AA_start in transcript=123_stop in transcript=452 MVSGGLSLESHQLHRTPVGSRWERAGAAKWTSRISARETTVPAQTSTAWCPRMICSSHPRVQDHRDSGGQGSGVAPLLNRTTTPASSPGT -------------------------------------------------------------- >In-frame_ENST00000380044_ENST00000332725_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(transcript)=470nt_BP=126nt GCGGAAGTTCCTAGGCCAGCCTGTCACGTGGGAGGGAGGCTCGGCGCTCAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGG CCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCTGGTGTCCGGGGGCCTGTCTTTGGAGAGCCATCAGCTCCACCGCACACCAGTGGGG TCTCGCTGGGAGAGAGCCGGAGCAGCGAAGTGGACGTCTCGGATCTCGGCTCGCGAAACTACAGTGCCCGCACAGACTTCTACTGCCTGG TGTCCAAGGATGATATGTAGCTCCCACCCCAGAGTGCAGGATCATAGGGACAGCGGGGGCCAGGGCAGCGGCGTCGCTCCTCTGCTCAAC AGGACCACAACCCCTGCCAGCAGCCCTGGGACCCTGCCAGCAGCCCTGGGAAAAGGCTGTGGCCTCAGGGCGCCTCCCAGTGCCAGAAAA >In-frame_ENST00000380044_ENST00000332725_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(amino acids)=109AA_start in transcript=123_stop in transcript=452 MVSGGLSLESHQLHRTPVGSRWERAGAAKWTSRISARETTVPAQTSTAWCPRMICSSHPRVQDHRDSGGQGSGVAPLLNRTTTPASSPGT -------------------------------------------------------------- >In-frame_ENST00000402722_ENST00000431843_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(transcript)=449nt_BP=105nt TGTCACGTGGGAGGGAGGCTCGGCGCTCAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTAC AGGTCCTGACAGCTGGTGTCCGGGGGCCTGTCTTTGGAGAGCCATCAGCTCCACCGCACACCAGTGGGGTCTCGCTGGGAGAGAGCCGGA GCAGCGAAGTGGACGTCTCGGATCTCGGCTCGCGAAACTACAGTGCCCGCACAGACTTCTACTGCCTGGTGTCCAAGGATGATATGTAGC TCCCACCCCAGAGTGCAGGATCATAGGGACAGCGGGGGCCAGGGCAGCGGCGTCGCTCCTCTGCTCAACAGGACCACAACCCCTGCCAGC >In-frame_ENST00000402722_ENST00000431843_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(amino acids)=109AA_start in transcript=102_stop in transcript=431 MVSGGLSLESHQLHRTPVGSRWERAGAAKWTSRISARETTVPAQTSTAWCPRMICSSHPRVQDHRDSGGQGSGVAPLLNRTTTPASSPGT -------------------------------------------------------------- >In-frame_ENST00000402722_ENST00000397632_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(transcript)=449nt_BP=105nt TGTCACGTGGGAGGGAGGCTCGGCGCTCAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTAC AGGTCCTGACAGCTGGTGTCCGGGGGCCTGTCTTTGGAGAGCCATCAGCTCCACCGCACACCAGTGGGGTCTCGCTGGGAGAGAGCCGGA GCAGCGAAGTGGACGTCTCGGATCTCGGCTCGCGAAACTACAGTGCCCGCACAGACTTCTACTGCCTGGTGTCCAAGGATGATATGTAGC TCCCACCCCAGAGTGCAGGATCATAGGGACAGCGGGGGCCAGGGCAGCGGCGTCGCTCCTCTGCTCAACAGGACCACAACCCCTGCCAGC >In-frame_ENST00000402722_ENST00000397632_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(amino acids)=109AA_start in transcript=102_stop in transcript=431 MVSGGLSLESHQLHRTPVGSRWERAGAAKWTSRISARETTVPAQTSTAWCPRMICSSHPRVQDHRDSGGQGSGVAPLLNRTTTPASSPGT -------------------------------------------------------------- >In-frame_ENST00000402722_ENST00000332725_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(transcript)=449nt_BP=105nt TGTCACGTGGGAGGGAGGCTCGGCGCTCAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTAC AGGTCCTGACAGCTGGTGTCCGGGGGCCTGTCTTTGGAGAGCCATCAGCTCCACCGCACACCAGTGGGGTCTCGCTGGGAGAGAGCCGGA GCAGCGAAGTGGACGTCTCGGATCTCGGCTCGCGAAACTACAGTGCCCGCACAGACTTCTACTGCCTGGTGTCCAAGGATGATATGTAGC TCCCACCCCAGAGTGCAGGATCATAGGGACAGCGGGGGCCAGGGCAGCGGCGTCGCTCCTCTGCTCAACAGGACCACAACCCCTGCCAGC >In-frame_ENST00000402722_ENST00000332725_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(amino acids)=109AA_start in transcript=102_stop in transcript=431 MVSGGLSLESHQLHRTPVGSRWERAGAAKWTSRISARETTVPAQTSTAWCPRMICSSHPRVQDHRDSGGQGSGVAPLLNRTTTPASSPGT -------------------------------------------------------------- >In-frame_ENST00000405983_ENST00000431843_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(transcript)=431nt_BP=87nt CTCGGCGCTCAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCTGGTG TCCGGGGGCCTGTCTTTGGAGAGCCATCAGCTCCACCGCACACCAGTGGGGTCTCGCTGGGAGAGAGCCGGAGCAGCGAAGTGGACGTCT CGGATCTCGGCTCGCGAAACTACAGTGCCCGCACAGACTTCTACTGCCTGGTGTCCAAGGATGATATGTAGCTCCCACCCCAGAGTGCAG GATCATAGGGACAGCGGGGGCCAGGGCAGCGGCGTCGCTCCTCTGCTCAACAGGACCACAACCCCTGCCAGCAGCCCTGGGACCCTGCCA >In-frame_ENST00000405983_ENST00000431843_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(amino acids)=109AA_start in transcript=84_stop in transcript=413 MVSGGLSLESHQLHRTPVGSRWERAGAAKWTSRISARETTVPAQTSTAWCPRMICSSHPRVQDHRDSGGQGSGVAPLLNRTTTPASSPGT -------------------------------------------------------------- >In-frame_ENST00000405983_ENST00000397632_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(transcript)=431nt_BP=87nt CTCGGCGCTCAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCTGGTG TCCGGGGGCCTGTCTTTGGAGAGCCATCAGCTCCACCGCACACCAGTGGGGTCTCGCTGGGAGAGAGCCGGAGCAGCGAAGTGGACGTCT CGGATCTCGGCTCGCGAAACTACAGTGCCCGCACAGACTTCTACTGCCTGGTGTCCAAGGATGATATGTAGCTCCCACCCCAGAGTGCAG GATCATAGGGACAGCGGGGGCCAGGGCAGCGGCGTCGCTCCTCTGCTCAACAGGACCACAACCCCTGCCAGCAGCCCTGGGACCCTGCCA >In-frame_ENST00000405983_ENST00000397632_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(amino acids)=109AA_start in transcript=84_stop in transcript=413 MVSGGLSLESHQLHRTPVGSRWERAGAAKWTSRISARETTVPAQTSTAWCPRMICSSHPRVQDHRDSGGQGSGVAPLLNRTTTPASSPGT -------------------------------------------------------------- >In-frame_ENST00000405983_ENST00000332725_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(transcript)=431nt_BP=87nt CTCGGCGCTCAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCTGGTG TCCGGGGGCCTGTCTTTGGAGAGCCATCAGCTCCACCGCACACCAGTGGGGTCTCGCTGGGAGAGAGCCGGAGCAGCGAAGTGGACGTCT CGGATCTCGGCTCGCGAAACTACAGTGCCCGCACAGACTTCTACTGCCTGGTGTCCAAGGATGATATGTAGCTCCCACCCCAGAGTGCAG GATCATAGGGACAGCGGGGGCCAGGGCAGCGGCGTCGCTCCTCTGCTCAACAGGACCACAACCCCTGCCAGCAGCCCTGGGACCCTGCCA >In-frame_ENST00000405983_ENST00000332725_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(amino acids)=109AA_start in transcript=84_stop in transcript=413 MVSGGLSLESHQLHRTPVGSRWERAGAAKWTSRISARETTVPAQTSTAWCPRMICSSHPRVQDHRDSGGQGSGVAPLLNRTTTPASSPGT -------------------------------------------------------------- >In-frame_ENST00000405076_ENST00000431843_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(transcript)=470nt_BP=126nt GCGGAAGTTCCTAGGCCAGCCTGTCACGTGGGAGGGAGGCTCGGCGCTCAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGG CCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCTGGTGTCCGGGGGCCTGTCTTTGGAGAGCCATCAGCTCCACCGCACACCAGTGGGG TCTCGCTGGGAGAGAGCCGGAGCAGCGAAGTGGACGTCTCGGATCTCGGCTCGCGAAACTACAGTGCCCGCACAGACTTCTACTGCCTGG TGTCCAAGGATGATATGTAGCTCCCACCCCAGAGTGCAGGATCATAGGGACAGCGGGGGCCAGGGCAGCGGCGTCGCTCCTCTGCTCAAC AGGACCACAACCCCTGCCAGCAGCCCTGGGACCCTGCCAGCAGCCCTGGGAAAAGGCTGTGGCCTCAGGGCGCCTCCCAGTGCCAGAAAA >In-frame_ENST00000405076_ENST00000431843_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(amino acids)=109AA_start in transcript=123_stop in transcript=452 MVSGGLSLESHQLHRTPVGSRWERAGAAKWTSRISARETTVPAQTSTAWCPRMICSSHPRVQDHRDSGGQGSGVAPLLNRTTTPASSPGT -------------------------------------------------------------- >In-frame_ENST00000405076_ENST00000397632_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(transcript)=470nt_BP=126nt GCGGAAGTTCCTAGGCCAGCCTGTCACGTGGGAGGGAGGCTCGGCGCTCAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGG CCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCTGGTGTCCGGGGGCCTGTCTTTGGAGAGCCATCAGCTCCACCGCACACCAGTGGGG TCTCGCTGGGAGAGAGCCGGAGCAGCGAAGTGGACGTCTCGGATCTCGGCTCGCGAAACTACAGTGCCCGCACAGACTTCTACTGCCTGG TGTCCAAGGATGATATGTAGCTCCCACCCCAGAGTGCAGGATCATAGGGACAGCGGGGGCCAGGGCAGCGGCGTCGCTCCTCTGCTCAAC AGGACCACAACCCCTGCCAGCAGCCCTGGGACCCTGCCAGCAGCCCTGGGAAAAGGCTGTGGCCTCAGGGCGCCTCCCAGTGCCAGAAAA >In-frame_ENST00000405076_ENST00000397632_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(amino acids)=109AA_start in transcript=123_stop in transcript=452 MVSGGLSLESHQLHRTPVGSRWERAGAAKWTSRISARETTVPAQTSTAWCPRMICSSHPRVQDHRDSGGQGSGVAPLLNRTTTPASSPGT -------------------------------------------------------------- >In-frame_ENST00000405076_ENST00000332725_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(transcript)=470nt_BP=126nt GCGGAAGTTCCTAGGCCAGCCTGTCACGTGGGAGGGAGGCTCGGCGCTCAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGG CCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCTGGTGTCCGGGGGCCTGTCTTTGGAGAGCCATCAGCTCCACCGCACACCAGTGGGG TCTCGCTGGGAGAGAGCCGGAGCAGCGAAGTGGACGTCTCGGATCTCGGCTCGCGAAACTACAGTGCCCGCACAGACTTCTACTGCCTGG TGTCCAAGGATGATATGTAGCTCCCACCCCAGAGTGCAGGATCATAGGGACAGCGGGGGCCAGGGCAGCGGCGTCGCTCCTCTGCTCAAC AGGACCACAACCCCTGCCAGCAGCCCTGGGACCCTGCCAGCAGCCCTGGGAAAAGGCTGTGGCCTCAGGGCGCCTCCCAGTGCCAGAAAA >In-frame_ENST00000405076_ENST00000332725_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(amino acids)=109AA_start in transcript=123_stop in transcript=452 MVSGGLSLESHQLHRTPVGSRWERAGAAKWTSRISARETTVPAQTSTAWCPRMICSSHPRVQDHRDSGGQGSGVAPLLNRTTTPASSPGT -------------------------------------------------------------- >In-frame_ENST00000403262_ENST00000431843_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(transcript)=435nt_BP=91nt GAGGCTCGGCGCTCAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCT GGTGTCCGGGGGCCTGTCTTTGGAGAGCCATCAGCTCCACCGCACACCAGTGGGGTCTCGCTGGGAGAGAGCCGGAGCAGCGAAGTGGAC GTCTCGGATCTCGGCTCGCGAAACTACAGTGCCCGCACAGACTTCTACTGCCTGGTGTCCAAGGATGATATGTAGCTCCCACCCCAGAGT GCAGGATCATAGGGACAGCGGGGGCCAGGGCAGCGGCGTCGCTCCTCTGCTCAACAGGACCACAACCCCTGCCAGCAGCCCTGGGACCCT >In-frame_ENST00000403262_ENST00000431843_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(amino acids)=109AA_start in transcript=88_stop in transcript=417 MVSGGLSLESHQLHRTPVGSRWERAGAAKWTSRISARETTVPAQTSTAWCPRMICSSHPRVQDHRDSGGQGSGVAPLLNRTTTPASSPGT -------------------------------------------------------------- >In-frame_ENST00000403262_ENST00000397632_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(transcript)=435nt_BP=91nt GAGGCTCGGCGCTCAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCT GGTGTCCGGGGGCCTGTCTTTGGAGAGCCATCAGCTCCACCGCACACCAGTGGGGTCTCGCTGGGAGAGAGCCGGAGCAGCGAAGTGGAC GTCTCGGATCTCGGCTCGCGAAACTACAGTGCCCGCACAGACTTCTACTGCCTGGTGTCCAAGGATGATATGTAGCTCCCACCCCAGAGT GCAGGATCATAGGGACAGCGGGGGCCAGGGCAGCGGCGTCGCTCCTCTGCTCAACAGGACCACAACCCCTGCCAGCAGCCCTGGGACCCT >In-frame_ENST00000403262_ENST00000397632_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(amino acids)=109AA_start in transcript=88_stop in transcript=417 MVSGGLSLESHQLHRTPVGSRWERAGAAKWTSRISARETTVPAQTSTAWCPRMICSSHPRVQDHRDSGGQGSGVAPLLNRTTTPASSPGT -------------------------------------------------------------- >In-frame_ENST00000403262_ENST00000332725_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(transcript)=435nt_BP=91nt GAGGCTCGGCGCTCAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCT GGTGTCCGGGGGCCTGTCTTTGGAGAGCCATCAGCTCCACCGCACACCAGTGGGGTCTCGCTGGGAGAGAGCCGGAGCAGCGAAGTGGAC GTCTCGGATCTCGGCTCGCGAAACTACAGTGCCCGCACAGACTTCTACTGCCTGGTGTCCAAGGATGATATGTAGCTCCCACCCCAGAGT GCAGGATCATAGGGACAGCGGGGGCCAGGGCAGCGGCGTCGCTCCTCTGCTCAACAGGACCACAACCCCTGCCAGCAGCCCTGGGACCCT >In-frame_ENST00000403262_ENST00000332725_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(amino acids)=109AA_start in transcript=88_stop in transcript=417 MVSGGLSLESHQLHRTPVGSRWERAGAAKWTSRISARETTVPAQTSTAWCPRMICSSHPRVQDHRDSGGQGSGVAPLLNRTTTPASSPGT -------------------------------------------------------------- >In-frame_ENST00000399052_ENST00000431843_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(transcript)=465nt_BP=121nt AGTTCCTAGGCCAGCCTGTCACGTGGGAGGGAGGCTCGGCGCTCAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCT CACCCGTGGAAAGTACAGGTCCTGACAGCTGGTGTCCGGGGGCCTGTCTTTGGAGAGCCATCAGCTCCACCGCACACCAGTGGGGTCTCG CTGGGAGAGAGCCGGAGCAGCGAAGTGGACGTCTCGGATCTCGGCTCGCGAAACTACAGTGCCCGCACAGACTTCTACTGCCTGGTGTCC AAGGATGATATGTAGCTCCCACCCCAGAGTGCAGGATCATAGGGACAGCGGGGGCCAGGGCAGCGGCGTCGCTCCTCTGCTCAACAGGAC CACAACCCCTGCCAGCAGCCCTGGGACCCTGCCAGCAGCCCTGGGAAAAGGCTGTGGCCTCAGGGCGCCTCCCAGTGCCAGAAAATAAAG >In-frame_ENST00000399052_ENST00000431843_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(amino acids)=109AA_start in transcript=118_stop in transcript=447 MVSGGLSLESHQLHRTPVGSRWERAGAAKWTSRISARETTVPAQTSTAWCPRMICSSHPRVQDHRDSGGQGSGVAPLLNRTTTPASSPGT -------------------------------------------------------------- >In-frame_ENST00000399052_ENST00000397632_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(transcript)=465nt_BP=121nt AGTTCCTAGGCCAGCCTGTCACGTGGGAGGGAGGCTCGGCGCTCAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCT CACCCGTGGAAAGTACAGGTCCTGACAGCTGGTGTCCGGGGGCCTGTCTTTGGAGAGCCATCAGCTCCACCGCACACCAGTGGGGTCTCG CTGGGAGAGAGCCGGAGCAGCGAAGTGGACGTCTCGGATCTCGGCTCGCGAAACTACAGTGCCCGCACAGACTTCTACTGCCTGGTGTCC AAGGATGATATGTAGCTCCCACCCCAGAGTGCAGGATCATAGGGACAGCGGGGGCCAGGGCAGCGGCGTCGCTCCTCTGCTCAACAGGAC CACAACCCCTGCCAGCAGCCCTGGGACCCTGCCAGCAGCCCTGGGAAAAGGCTGTGGCCTCAGGGCGCCTCCCAGTGCCAGAAAATAAAG >In-frame_ENST00000399052_ENST00000397632_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(amino acids)=109AA_start in transcript=118_stop in transcript=447 MVSGGLSLESHQLHRTPVGSRWERAGAAKWTSRISARETTVPAQTSTAWCPRMICSSHPRVQDHRDSGGQGSGVAPLLNRTTTPASSPGT -------------------------------------------------------------- >In-frame_ENST00000399052_ENST00000332725_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(transcript)=465nt_BP=121nt AGTTCCTAGGCCAGCCTGTCACGTGGGAGGGAGGCTCGGCGCTCAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCT CACCCGTGGAAAGTACAGGTCCTGACAGCTGGTGTCCGGGGGCCTGTCTTTGGAGAGCCATCAGCTCCACCGCACACCAGTGGGGTCTCG CTGGGAGAGAGCCGGAGCAGCGAAGTGGACGTCTCGGATCTCGGCTCGCGAAACTACAGTGCCCGCACAGACTTCTACTGCCTGGTGTCC AAGGATGATATGTAGCTCCCACCCCAGAGTGCAGGATCATAGGGACAGCGGGGGCCAGGGCAGCGGCGTCGCTCCTCTGCTCAACAGGAC CACAACCCCTGCCAGCAGCCCTGGGACCCTGCCAGCAGCCCTGGGAAAAGGCTGTGGCCTCAGGGCGCCTCCCAGTGCCAGAAAATAAAG >In-frame_ENST00000399052_ENST00000332725_TCGA-BR-A4QI-01A_MPV17_chr2_27545315_-_SIGIRR_chr11_406059_length(amino acids)=109AA_start in transcript=118_stop in transcript=447 MVSGGLSLESHQLHRTPVGSRWERAGAAKWTSRISARETTVPAQTSTAWCPRMICSSHPRVQDHRDSGGQGSGVAPLLNRTTTPASSPGT -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for MPV17-SIGIRR |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for MPV17-SIGIRR |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for MPV17-SIGIRR |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | MPV17 | C1850406 | NAVAJO NEUROHEPATOPATHY | 18 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
Hgene | MPV17 | C0008370 | Cholestasis | 1 | GENOMICS_ENGLAND |
Hgene | MPV17 | C0009197 | Cochlear Diseases | 1 | CTD_human |
Hgene | MPV17 | C0017668 | Focal glomerulosclerosis | 1 | CTD_human |
Hgene | MPV17 | C0022283 | Incontinentia Pigmenti Achromians | 1 | CTD_human |
Hgene | MPV17 | C0033687 | Proteinuria | 1 | CTD_human |
Hgene | MPV17 | C0036305 | Schamberg Disease | 1 | CTD_human |
Hgene | MPV17 | C0085605 | Liver Failure | 1 | GENOMICS_ENGLAND |
Hgene | MPV17 | C0086432 | Hyalinosis, Segmental Glomerular | 1 | CTD_human |
Hgene | MPV17 | C0344307 | Absence of pain sensation | 1 | GENOMICS_ENGLAND |
Hgene | MPV17 | C0549567 | Pigmentation Disorders | 1 | CTD_human |
Hgene | MPV17 | C0751651 | Mitochondrial Diseases | 1 | CTD_human |
Hgene | MPV17 | C0949855 | Electron Transport Chain Deficiencies, Mitochondrial | 1 | CTD_human |
Hgene | MPV17 | C0949856 | Oxidative Phosphorylation Deficiencies | 1 | CTD_human |
Hgene | MPV17 | C0949857 | Mitochondrial Respiratory Chain Deficiencies | 1 | CTD_human |