|
Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:MSRA-SOAT1 (FusionGDB2 ID:55086) |
Fusion Gene Summary for MSRA-SOAT1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: MSRA-SOAT1 | Fusion gene ID: 55086 | Hgene | Tgene | Gene symbol | MSRA | SOAT1 | Gene ID | 4482 | 6646 |
Gene name | methionine sulfoxide reductase A | sterol O-acyltransferase 1 | |
Synonyms | PMSR | ACACT|ACAT|ACAT-1|ACAT1|SOAT|STAT | |
Cytomap | 8p23.1 | 1q25.2 | |
Type of gene | protein-coding | protein-coding | |
Description | mitochondrial peptide methionine sulfoxide reductasecytosolic methionine-S-sulfoxide reductasepeptide Met(O) reductasepeptide met (O) reductasepeptide-methionine (S)-S-oxide reductase | sterol O-acyltransferase 1acyl-coenzyme A:cholesterol acyltransferase 1sterol O-acyltransferase (acyl-Coenzyme A: cholesterol acyltransferase) 1 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | P35610 | |
Ensembl transtripts involved in fusion gene | ENST00000317173, ENST00000441698, ENST00000518255, ENST00000521209, ENST00000528246, ENST00000382490, ENST00000517594, | ENST00000539888, ENST00000535686, ENST00000540564, ENST00000367619, | |
Fusion gene scores | * DoF score | 12 X 9 X 6=648 | 2 X 2 X 2=8 |
# samples | 13 | 2 | |
** MAII score | log2(13/648*10)=-2.31748218985617 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(2/8*10)=1.32192809488736 | |
Context | PubMed: MSRA [Title/Abstract] AND SOAT1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | MSRA(10285718)-SOAT1(179318058), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | SOAT1 | GO:0008203 | cholesterol metabolic process | 9756919|16647063 |
Tgene | SOAT1 | GO:0034435 | cholesterol esterification | 16647063 |
Fusion gene breakpoints across MSRA (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across SOAT1 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS5.0 | N/A | CB529586 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
Top |
Fusion Gene ORF analysis for MSRA-SOAT1 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000317173 | ENST00000539888 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
In-frame | ENST00000317173 | ENST00000535686 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
In-frame | ENST00000317173 | ENST00000540564 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
In-frame | ENST00000317173 | ENST00000367619 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
Frame-shift | ENST00000441698 | ENST00000539888 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
Frame-shift | ENST00000441698 | ENST00000535686 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
Frame-shift | ENST00000441698 | ENST00000540564 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
Frame-shift | ENST00000441698 | ENST00000367619 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
intron-3CDS | ENST00000518255 | ENST00000539888 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
intron-3CDS | ENST00000518255 | ENST00000535686 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
intron-3CDS | ENST00000518255 | ENST00000540564 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
intron-3CDS | ENST00000518255 | ENST00000367619 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
intron-3CDS | ENST00000521209 | ENST00000539888 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
intron-3CDS | ENST00000521209 | ENST00000535686 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
intron-3CDS | ENST00000521209 | ENST00000540564 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
intron-3CDS | ENST00000521209 | ENST00000367619 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
In-frame | ENST00000528246 | ENST00000539888 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
In-frame | ENST00000528246 | ENST00000535686 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
In-frame | ENST00000528246 | ENST00000540564 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
In-frame | ENST00000528246 | ENST00000367619 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
Frame-shift | ENST00000382490 | ENST00000539888 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
Frame-shift | ENST00000382490 | ENST00000535686 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
Frame-shift | ENST00000382490 | ENST00000540564 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
Frame-shift | ENST00000382490 | ENST00000367619 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
intron-3CDS | ENST00000517594 | ENST00000539888 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
intron-3CDS | ENST00000517594 | ENST00000535686 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
intron-3CDS | ENST00000517594 | ENST00000540564 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
intron-3CDS | ENST00000517594 | ENST00000367619 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000317173 | MSRA | chr8 | 10285718 | - | ENST00000539888 | SOAT1 | chr1 | 179318058 | - | 1999 | 1475 | 249 | 824 | 191 |
ENST00000317173 | MSRA | chr8 | 10285718 | - | ENST00000535686 | SOAT1 | chr1 | 179318058 | - | 2054 | 1475 | 249 | 824 | 191 |
ENST00000317173 | MSRA | chr8 | 10285718 | - | ENST00000540564 | SOAT1 | chr1 | 179318058 | - | 2195 | 1475 | 249 | 824 | 191 |
ENST00000317173 | MSRA | chr8 | 10285718 | - | ENST00000367619 | SOAT1 | chr1 | 179318058 | - | 6872 | 1475 | 249 | 824 | 191 |
ENST00000528246 | MSRA | chr8 | 10285718 | - | ENST00000539888 | SOAT1 | chr1 | 179318058 | - | 2169 | 1645 | 1574 | 2002 | 142 |
ENST00000528246 | MSRA | chr8 | 10285718 | - | ENST00000535686 | SOAT1 | chr1 | 179318058 | - | 2224 | 1645 | 1574 | 2002 | 142 |
ENST00000528246 | MSRA | chr8 | 10285718 | - | ENST00000540564 | SOAT1 | chr1 | 179318058 | - | 2365 | 1645 | 1574 | 2002 | 142 |
ENST00000528246 | MSRA | chr8 | 10285718 | - | ENST00000367619 | SOAT1 | chr1 | 179318058 | - | 7042 | 1645 | 1574 | 2002 | 142 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000317173 | ENST00000539888 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - | 0.006346672 | 0.9936533 |
ENST00000317173 | ENST00000535686 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - | 0.00629249 | 0.99370754 |
ENST00000317173 | ENST00000540564 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - | 0.005325139 | 0.9946748 |
ENST00000317173 | ENST00000367619 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - | 0.001766881 | 0.9982331 |
ENST00000528246 | ENST00000539888 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - | 0.22926816 | 0.7707318 |
ENST00000528246 | ENST00000535686 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - | 0.2555321 | 0.7444679 |
ENST00000528246 | ENST00000540564 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - | 0.22516045 | 0.7748395 |
ENST00000528246 | ENST00000367619 | MSRA | chr8 | 10285718 | - | SOAT1 | chr1 | 179318058 | - | 0.091814704 | 0.9081853 |
Top |
Fusion Genomic Features for MSRA-SOAT1 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
Top |
Fusion Protein Features for MSRA-SOAT1 |
Go to FGviewer for the breakpoints of chr8:10285718-chr1:179318058 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | SOAT1 |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Catalyzes the formation of fatty acid-cholesterol esters, which are less soluble in membranes than cholesterol (PubMed:16154994, PubMed:16647063, PubMed:9020103, PubMed:32433614, PubMed:32433613). Plays a role in lipoprotein assembly and dietary cholesterol absorption (PubMed:16154994, PubMed:9020103). Utilizes oleoyl-CoA ((9Z)-octadecenoyl-CoA) preferentially as susbstrate: shows a higher activity towards an acyl-CoA substrate with a double bond at the delta-9 position (9Z) than towards saturated acyl-CoA or an unsaturated acyl-CoA with a double bond at the delta-7 (7Z) or delta-11 (11Z) positions (PubMed:11294643, PubMed:32433614). {ECO:0000269|PubMed:11294643, ECO:0000269|PubMed:16154994, ECO:0000269|PubMed:16647063, ECO:0000269|PubMed:32433613, ECO:0000269|PubMed:32433614, ECO:0000269|PubMed:9020103}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000367619 | 0 | 16 | 403_409 | 0 | 551.0 | Motif | FYXDWWN motif | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000539888 | 0 | 15 | 403_409 | 0 | 486.0 | Motif | FYXDWWN motif | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000540564 | 0 | 15 | 403_409 | 0 | 493.0 | Motif | FYXDWWN motif | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000367619 | 0 | 16 | 161_180 | 0 | 551.0 | Topological domain | Lumenal | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000367619 | 0 | 16 | 1_138 | 0 | 551.0 | Topological domain | Cytoplasmic | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000367619 | 0 | 16 | 207_218 | 0 | 551.0 | Topological domain | Cytoplasmic | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000367619 | 0 | 16 | 245_252 | 0 | 551.0 | Topological domain | Lumenal | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000367619 | 0 | 16 | 277_319 | 0 | 551.0 | Topological domain | Cytoplasmic | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000367619 | 0 | 16 | 353_369 | 0 | 551.0 | Topological domain | Lumenal | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000367619 | 0 | 16 | 396_443 | 0 | 551.0 | Topological domain | Cytoplasmic | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000367619 | 0 | 16 | 469_474 | 0 | 551.0 | Topological domain | Lumenal | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000367619 | 0 | 16 | 491_496 | 0 | 551.0 | Topological domain | Cytoplasmic | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000367619 | 0 | 16 | 529_550 | 0 | 551.0 | Topological domain | Lumenal | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000539888 | 0 | 15 | 161_180 | 0 | 486.0 | Topological domain | Lumenal | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000539888 | 0 | 15 | 1_138 | 0 | 486.0 | Topological domain | Cytoplasmic | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000539888 | 0 | 15 | 207_218 | 0 | 486.0 | Topological domain | Cytoplasmic | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000539888 | 0 | 15 | 245_252 | 0 | 486.0 | Topological domain | Lumenal | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000539888 | 0 | 15 | 277_319 | 0 | 486.0 | Topological domain | Cytoplasmic | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000539888 | 0 | 15 | 353_369 | 0 | 486.0 | Topological domain | Lumenal | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000539888 | 0 | 15 | 396_443 | 0 | 486.0 | Topological domain | Cytoplasmic | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000539888 | 0 | 15 | 469_474 | 0 | 486.0 | Topological domain | Lumenal | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000539888 | 0 | 15 | 491_496 | 0 | 486.0 | Topological domain | Cytoplasmic | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000539888 | 0 | 15 | 529_550 | 0 | 486.0 | Topological domain | Lumenal | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000540564 | 0 | 15 | 161_180 | 0 | 493.0 | Topological domain | Lumenal | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000540564 | 0 | 15 | 1_138 | 0 | 493.0 | Topological domain | Cytoplasmic | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000540564 | 0 | 15 | 207_218 | 0 | 493.0 | Topological domain | Cytoplasmic | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000540564 | 0 | 15 | 245_252 | 0 | 493.0 | Topological domain | Lumenal | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000540564 | 0 | 15 | 277_319 | 0 | 493.0 | Topological domain | Cytoplasmic | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000540564 | 0 | 15 | 353_369 | 0 | 493.0 | Topological domain | Lumenal | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000540564 | 0 | 15 | 396_443 | 0 | 493.0 | Topological domain | Cytoplasmic | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000540564 | 0 | 15 | 469_474 | 0 | 493.0 | Topological domain | Lumenal | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000540564 | 0 | 15 | 491_496 | 0 | 493.0 | Topological domain | Cytoplasmic | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000540564 | 0 | 15 | 529_550 | 0 | 493.0 | Topological domain | Lumenal | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000367619 | 0 | 16 | 139_160 | 0 | 551.0 | Transmembrane | Helical%3B Name%3D1 | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000367619 | 0 | 16 | 181_206 | 0 | 551.0 | Transmembrane | Helical%3B Name%3D2 | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000367619 | 0 | 16 | 219_244 | 0 | 551.0 | Transmembrane | Helical%3B Name%3D3 | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000367619 | 0 | 16 | 253_276 | 0 | 551.0 | Transmembrane | Helical%3B Name%3D4 | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000367619 | 0 | 16 | 320_352 | 0 | 551.0 | Transmembrane | Helical%3B Name%3D5 | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000367619 | 0 | 16 | 370_395 | 0 | 551.0 | Transmembrane | Helical%3B Name%3D6 | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000367619 | 0 | 16 | 444_468 | 0 | 551.0 | Transmembrane | Helical%3B Name%3D7 | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000367619 | 0 | 16 | 475_490 | 0 | 551.0 | Transmembrane | Helical%3B Name%3D8 | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000367619 | 0 | 16 | 497_528 | 0 | 551.0 | Transmembrane | Helical%3B Name%3D9 | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000539888 | 0 | 15 | 139_160 | 0 | 486.0 | Transmembrane | Helical%3B Name%3D1 | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000539888 | 0 | 15 | 181_206 | 0 | 486.0 | Transmembrane | Helical%3B Name%3D2 | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000539888 | 0 | 15 | 219_244 | 0 | 486.0 | Transmembrane | Helical%3B Name%3D3 | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000539888 | 0 | 15 | 253_276 | 0 | 486.0 | Transmembrane | Helical%3B Name%3D4 | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000539888 | 0 | 15 | 320_352 | 0 | 486.0 | Transmembrane | Helical%3B Name%3D5 | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000539888 | 0 | 15 | 370_395 | 0 | 486.0 | Transmembrane | Helical%3B Name%3D6 | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000539888 | 0 | 15 | 444_468 | 0 | 486.0 | Transmembrane | Helical%3B Name%3D7 | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000539888 | 0 | 15 | 475_490 | 0 | 486.0 | Transmembrane | Helical%3B Name%3D8 | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000539888 | 0 | 15 | 497_528 | 0 | 486.0 | Transmembrane | Helical%3B Name%3D9 | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000540564 | 0 | 15 | 139_160 | 0 | 493.0 | Transmembrane | Helical%3B Name%3D1 | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000540564 | 0 | 15 | 181_206 | 0 | 493.0 | Transmembrane | Helical%3B Name%3D2 | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000540564 | 0 | 15 | 219_244 | 0 | 493.0 | Transmembrane | Helical%3B Name%3D3 | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000540564 | 0 | 15 | 253_276 | 0 | 493.0 | Transmembrane | Helical%3B Name%3D4 | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000540564 | 0 | 15 | 320_352 | 0 | 493.0 | Transmembrane | Helical%3B Name%3D5 | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000540564 | 0 | 15 | 370_395 | 0 | 493.0 | Transmembrane | Helical%3B Name%3D6 | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000540564 | 0 | 15 | 444_468 | 0 | 493.0 | Transmembrane | Helical%3B Name%3D7 | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000540564 | 0 | 15 | 475_490 | 0 | 493.0 | Transmembrane | Helical%3B Name%3D8 | |
Tgene | SOAT1 | chr8:10285718 | chr1:179318058 | ENST00000540564 | 0 | 15 | 497_528 | 0 | 493.0 | Transmembrane | Helical%3B Name%3D9 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Top |
Fusion Gene Sequence for MSRA-SOAT1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000317173_ENST00000539888_CB529586_MSRA_chr8_10285718_-_SOAT1_chr1_179318058_length(transcript)=1999nt_BP=1475nt GGAACTCGCCGGGCCACACCCCCTGTCCAGGGAAGGAACACGCCCCCGGTGACAGCCGGTACGGCCCCGGGTTTGGGCAACCTCGATTAC GGGCGGCCTCCAGCCCCGCCAGCAGCGCCCCGCGCCCGCCCGCCCGCGCCCCTGCCGCCCCCCGGTTCCGGCCGCGGACCCCACTCTCTG CCGTTCCGGCTGCGGCTCCGCTGCCGGTAGCGCCGTCCCCCGGGACCACCCTTCGGCTGGCGCCCTCCCATGCTCTCGGCCACCCGGAGG GCTTGCCAGCTCCTCCTCCTCCACAGCCTCTTTCCCGTCCCGAGGATGGGCAACTCGGCCTCGAACATCGTCAGCCCCCAGGAGGCCTTG CCGGGCCGGAAGGAACAGACCCCTGTAGCGGCCAAACATCATGTCAATGGCAACAGAACAGTCGAACCTTTCCCAGAGGGAACACAGATG GCTGTATTTGGAATGGGATGTTTCTGGGGAGCTGAAAGGAAATTCTGGGTCTTGAAAGGAGTGTATTCAACTCAAGTTGGTTTTGCAGGA GGCTATACTTCAAATCCTACTTATAAAGAAGTCTGCTCAGAAAAAACTGGCCATGCAGAAGTCGTCCGAGTGGTGTACCAGCCAGAACAC ATGAGTTTTGAGGAACTGCTCAAGGTCTTCTGGGAGAATCACGACCCGACCCAAGGTATGCGCCAGGGGAACGACCATGGCACTCAGTAC CGCTCGGCCATCTACCCGACCTCTGCCAAGCAAATGGAGGCAGCCCTGAGCTCCAAAGAGAACTACCAAAAGACTATGCGGAAGACTACC ACCAGCAGTACCTGAGCAAGAACCCCAATGGCTACTGCGGCCTTGGGGGCACCGGCGTGTCCTGCCCAGTGGGTATTAAAAAATAATTTC TCCCCACATGGTGGGCCTTTGAGGTTCCAGTAAAAATGCTTTCAACAAATTGGGCAATGCTTGTGTGATTCACAATCGTGGCATTTAAAG TGCACAAAGTACAAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTA TCTCCTAATAAGTTATGGTGGGAGTGGAGCTGTGCAGTTTCCTGTGTCTTCTGGGGTCTGAGTGAAGATAGCAGGGATGCTGTGTTCACC CTTCTTGGTAGAAGCTAAGGTGTGAGCTGGGAGGTTGCTGGACAGGATGGGGGACCCCAGAAGTCCTTTATCTGTGCTCTCTGCCCGCCA GTGCCTTACAATTTGCAAACGTGTATAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATACATAAGGGGCTT TCTCTCCCTTTTCAGCCCTCTCTGTGCAGAGAAAAGATGTGAGTCCGCTTGATGAATTCTAATGCTTTGCTTAGAGCTATGAGAAATGTT TGTTTTAATAAAAACCTACAGTCCAATAATGCCAATTACAAGGACTTTCTCTGGTTTTTCTCCAAGAGATTCAAATCTGCTGCCATGTTA GCTGTCTTTGCTGTATCTGCTGTAGTACACGAATATGCCTTGGCTGTTTGCTTGAGCTTTTTCTATCCCGTGCTCTTCGTGCTCTTCATG TTCTTTGGAATGGCTTTCAACTTCATTGTCAATGATAGTCGGAAAAAGCCGATTTGGAATGTTCTGATGTGGACTTCTCTTTTCTTGGGC AATGGAGTCTTACTCTGCTTTTATTCTCAAGAATGGTATGCACGTCAGCACTGTCCTCTGAAAAATCCCACATTTTTGGATTATGTCCGG CCACGTTCCTGGACTTGTCGTTACGTGTTTTAGAAGCTTGGACTTTGTTTCCTCCTTGTCACTGAAGATTGGGTAGCTCCCTGATTTGGA GCCAGCTGTTTCCAGTTGTTACTGAAGTTATCTGTGTTATTTGGACCACTCCAGGCTTTACAGATGACTCACTCCATTCCTAGGTCACTT >In-frame_ENST00000317173_ENST00000539888_CB529586_MSRA_chr8_10285718_-_SOAT1_chr1_179318058_length(amino acids)=191AA_start in transcript=249_stop in transcript=824 MLSATRRACQLLLLHSLFPVPRMGNSASNIVSPQEALPGRKEQTPVAAKHHVNGNRTVEPFPEGTQMAVFGMGCFWGAERKFWVLKGVYS TQVGFAGGYTSNPTYKEVCSEKTGHAEVVRVVYQPEHMSFEELLKVFWENHDPTQGMRQGNDHGTQYRSAIYPTSAKQMEAALSSKENYQ -------------------------------------------------------------- >In-frame_ENST00000317173_ENST00000535686_CB529586_MSRA_chr8_10285718_-_SOAT1_chr1_179318058_length(transcript)=2054nt_BP=1475nt GGAACTCGCCGGGCCACACCCCCTGTCCAGGGAAGGAACACGCCCCCGGTGACAGCCGGTACGGCCCCGGGTTTGGGCAACCTCGATTAC GGGCGGCCTCCAGCCCCGCCAGCAGCGCCCCGCGCCCGCCCGCCCGCGCCCCTGCCGCCCCCCGGTTCCGGCCGCGGACCCCACTCTCTG CCGTTCCGGCTGCGGCTCCGCTGCCGGTAGCGCCGTCCCCCGGGACCACCCTTCGGCTGGCGCCCTCCCATGCTCTCGGCCACCCGGAGG GCTTGCCAGCTCCTCCTCCTCCACAGCCTCTTTCCCGTCCCGAGGATGGGCAACTCGGCCTCGAACATCGTCAGCCCCCAGGAGGCCTTG CCGGGCCGGAAGGAACAGACCCCTGTAGCGGCCAAACATCATGTCAATGGCAACAGAACAGTCGAACCTTTCCCAGAGGGAACACAGATG GCTGTATTTGGAATGGGATGTTTCTGGGGAGCTGAAAGGAAATTCTGGGTCTTGAAAGGAGTGTATTCAACTCAAGTTGGTTTTGCAGGA GGCTATACTTCAAATCCTACTTATAAAGAAGTCTGCTCAGAAAAAACTGGCCATGCAGAAGTCGTCCGAGTGGTGTACCAGCCAGAACAC ATGAGTTTTGAGGAACTGCTCAAGGTCTTCTGGGAGAATCACGACCCGACCCAAGGTATGCGCCAGGGGAACGACCATGGCACTCAGTAC CGCTCGGCCATCTACCCGACCTCTGCCAAGCAAATGGAGGCAGCCCTGAGCTCCAAAGAGAACTACCAAAAGACTATGCGGAAGACTACC ACCAGCAGTACCTGAGCAAGAACCCCAATGGCTACTGCGGCCTTGGGGGCACCGGCGTGTCCTGCCCAGTGGGTATTAAAAAATAATTTC TCCCCACATGGTGGGCCTTTGAGGTTCCAGTAAAAATGCTTTCAACAAATTGGGCAATGCTTGTGTGATTCACAATCGTGGCATTTAAAG TGCACAAAGTACAAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTA TCTCCTAATAAGTTATGGTGGGAGTGGAGCTGTGCAGTTTCCTGTGTCTTCTGGGGTCTGAGTGAAGATAGCAGGGATGCTGTGTTCACC CTTCTTGGTAGAAGCTAAGGTGTGAGCTGGGAGGTTGCTGGACAGGATGGGGGACCCCAGAAGTCCTTTATCTGTGCTCTCTGCCCGCCA GTGCCTTACAATTTGCAAACGTGTATAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATACATAAGGGGCTT TCTCTCCCTTTTCAGCCCTCTCTGTGCAGAGAAAAGATGTGAGTCCGCTTGATGAATTCTAATGCTTTGCTTAGAGCTATGAGAAATGTT TGTTTTAATAAAAACCTACAGTCCAATAATGCCAATTACAAGGACTTTCTCTGGTTTTTCTCCAAGAGATTCAAATCTGCTGCCATGTTA GCTGTCTTTGCTGTATCTGCTGTAGTACACGAATATGCCTTGGCTGTTTGCTTGAGCTTTTTCTATCCCGTGCTCTTCGTGCTCTTCATG TTCTTTGGAATGGCTTTCAACTTCATTGTCAATGATAGTCGGAAAAAGCCGATTTGGAATGTTCTGATGTGGACTTCTCTTTTCTTGGGC AATGGAGTCTTACTCTGCTTTTATTCTCAAGAATGGTATGCACGTCAGCACTGTCCTCTGAAAAATCCCACATTTTTGGATTATGTCCGG CCACGTTCCTGGACTTGTCGTTACGTGTTTTAGAAGCTTGGACTTTGTTTCCTCCTTGTCACTGAAGATTGGGTAGCTCCCTGATTTGGA GCCAGCTGTTTCCAGTTGTTACTGAAGTTATCTGTGTTATTTGGACCACTCCAGGCTTTACAGATGACTCACTCCATTCCTAGGTCACTT >In-frame_ENST00000317173_ENST00000535686_CB529586_MSRA_chr8_10285718_-_SOAT1_chr1_179318058_length(amino acids)=191AA_start in transcript=249_stop in transcript=824 MLSATRRACQLLLLHSLFPVPRMGNSASNIVSPQEALPGRKEQTPVAAKHHVNGNRTVEPFPEGTQMAVFGMGCFWGAERKFWVLKGVYS TQVGFAGGYTSNPTYKEVCSEKTGHAEVVRVVYQPEHMSFEELLKVFWENHDPTQGMRQGNDHGTQYRSAIYPTSAKQMEAALSSKENYQ -------------------------------------------------------------- >In-frame_ENST00000317173_ENST00000540564_CB529586_MSRA_chr8_10285718_-_SOAT1_chr1_179318058_length(transcript)=2195nt_BP=1475nt GGAACTCGCCGGGCCACACCCCCTGTCCAGGGAAGGAACACGCCCCCGGTGACAGCCGGTACGGCCCCGGGTTTGGGCAACCTCGATTAC GGGCGGCCTCCAGCCCCGCCAGCAGCGCCCCGCGCCCGCCCGCCCGCGCCCCTGCCGCCCCCCGGTTCCGGCCGCGGACCCCACTCTCTG CCGTTCCGGCTGCGGCTCCGCTGCCGGTAGCGCCGTCCCCCGGGACCACCCTTCGGCTGGCGCCCTCCCATGCTCTCGGCCACCCGGAGG GCTTGCCAGCTCCTCCTCCTCCACAGCCTCTTTCCCGTCCCGAGGATGGGCAACTCGGCCTCGAACATCGTCAGCCCCCAGGAGGCCTTG CCGGGCCGGAAGGAACAGACCCCTGTAGCGGCCAAACATCATGTCAATGGCAACAGAACAGTCGAACCTTTCCCAGAGGGAACACAGATG GCTGTATTTGGAATGGGATGTTTCTGGGGAGCTGAAAGGAAATTCTGGGTCTTGAAAGGAGTGTATTCAACTCAAGTTGGTTTTGCAGGA GGCTATACTTCAAATCCTACTTATAAAGAAGTCTGCTCAGAAAAAACTGGCCATGCAGAAGTCGTCCGAGTGGTGTACCAGCCAGAACAC ATGAGTTTTGAGGAACTGCTCAAGGTCTTCTGGGAGAATCACGACCCGACCCAAGGTATGCGCCAGGGGAACGACCATGGCACTCAGTAC CGCTCGGCCATCTACCCGACCTCTGCCAAGCAAATGGAGGCAGCCCTGAGCTCCAAAGAGAACTACCAAAAGACTATGCGGAAGACTACC ACCAGCAGTACCTGAGCAAGAACCCCAATGGCTACTGCGGCCTTGGGGGCACCGGCGTGTCCTGCCCAGTGGGTATTAAAAAATAATTTC TCCCCACATGGTGGGCCTTTGAGGTTCCAGTAAAAATGCTTTCAACAAATTGGGCAATGCTTGTGTGATTCACAATCGTGGCATTTAAAG TGCACAAAGTACAAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTA TCTCCTAATAAGTTATGGTGGGAGTGGAGCTGTGCAGTTTCCTGTGTCTTCTGGGGTCTGAGTGAAGATAGCAGGGATGCTGTGTTCACC CTTCTTGGTAGAAGCTAAGGTGTGAGCTGGGAGGTTGCTGGACAGGATGGGGGACCCCAGAAGTCCTTTATCTGTGCTCTCTGCCCGCCA GTGCCTTACAATTTGCAAACGTGTATAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATACATAAGGGGCTT TCTCTCCCTTTTCAGCCCTCTCTGTGCAGAGAAAAGATGTGAGTCCGCTTGATGAATTCTAATGCTTTGCTTAGAGCTATGAGAAATGTT TGTTTTAATAAAAACCTACAGTCCAATAATGCCAATTACAAGGACTTTCTCTGGTTTTTCTCCAAGAGATTCAAATCTGCTGCCATGTTA GCTGTCTTTGCTGTATCTGCTGTAGTACACGAATATGCCTTGGCTGTTTGCTTGAGCTTTTTCTATCCCGTGCTCTTCGTGCTCTTCATG TTCTTTGGAATGGCTTTCAACTTCATTGTCAATGATAGTCGGAAAAAGCCGATTTGGAATGTTCTGATGTGGACTTCTCTTTTCTTGGGC AATGGAGTCTTACTCTGCTTTTATTCTCAAGAATGGTATGCACGTCAGCACTGTCCTCTGAAAAATCCCACATTTTTGGATTATGTCCGG CCACGTTCCTGGACTTGTCGTTACGTGTTTTAGAAGCTTGGACTTTGTTTCCTCCTTGTCACTGAAGATTGGGTAGCTCCCTGATTTGGA GCCAGCTGTTTCCAGTTGTTACTGAAGTTATCTGTGTTATTTGGACCACTCCAGGCTTTACAGATGACTCACTCCATTCCTAGGTCACTT GAAGCCAAACTGTTGGAAGTTCACTGGAGTCTTGTACACTTAAGCAGAGCAGAACTTTTTTTGTGGGGCTGGGTGGGGGGAGAAGACCGA CTAACAGCTGAAGTAATGACAGATTGTTGCTGGGTCATATCAGCTTTATCCCTTGGTAATTATATCTGTTTTGTTTCTTGACTCTGTCCA >In-frame_ENST00000317173_ENST00000540564_CB529586_MSRA_chr8_10285718_-_SOAT1_chr1_179318058_length(amino acids)=191AA_start in transcript=249_stop in transcript=824 MLSATRRACQLLLLHSLFPVPRMGNSASNIVSPQEALPGRKEQTPVAAKHHVNGNRTVEPFPEGTQMAVFGMGCFWGAERKFWVLKGVYS TQVGFAGGYTSNPTYKEVCSEKTGHAEVVRVVYQPEHMSFEELLKVFWENHDPTQGMRQGNDHGTQYRSAIYPTSAKQMEAALSSKENYQ -------------------------------------------------------------- >In-frame_ENST00000317173_ENST00000367619_CB529586_MSRA_chr8_10285718_-_SOAT1_chr1_179318058_length(transcript)=6872nt_BP=1475nt GGAACTCGCCGGGCCACACCCCCTGTCCAGGGAAGGAACACGCCCCCGGTGACAGCCGGTACGGCCCCGGGTTTGGGCAACCTCGATTAC GGGCGGCCTCCAGCCCCGCCAGCAGCGCCCCGCGCCCGCCCGCCCGCGCCCCTGCCGCCCCCCGGTTCCGGCCGCGGACCCCACTCTCTG CCGTTCCGGCTGCGGCTCCGCTGCCGGTAGCGCCGTCCCCCGGGACCACCCTTCGGCTGGCGCCCTCCCATGCTCTCGGCCACCCGGAGG GCTTGCCAGCTCCTCCTCCTCCACAGCCTCTTTCCCGTCCCGAGGATGGGCAACTCGGCCTCGAACATCGTCAGCCCCCAGGAGGCCTTG CCGGGCCGGAAGGAACAGACCCCTGTAGCGGCCAAACATCATGTCAATGGCAACAGAACAGTCGAACCTTTCCCAGAGGGAACACAGATG GCTGTATTTGGAATGGGATGTTTCTGGGGAGCTGAAAGGAAATTCTGGGTCTTGAAAGGAGTGTATTCAACTCAAGTTGGTTTTGCAGGA GGCTATACTTCAAATCCTACTTATAAAGAAGTCTGCTCAGAAAAAACTGGCCATGCAGAAGTCGTCCGAGTGGTGTACCAGCCAGAACAC ATGAGTTTTGAGGAACTGCTCAAGGTCTTCTGGGAGAATCACGACCCGACCCAAGGTATGCGCCAGGGGAACGACCATGGCACTCAGTAC CGCTCGGCCATCTACCCGACCTCTGCCAAGCAAATGGAGGCAGCCCTGAGCTCCAAAGAGAACTACCAAAAGACTATGCGGAAGACTACC ACCAGCAGTACCTGAGCAAGAACCCCAATGGCTACTGCGGCCTTGGGGGCACCGGCGTGTCCTGCCCAGTGGGTATTAAAAAATAATTTC TCCCCACATGGTGGGCCTTTGAGGTTCCAGTAAAAATGCTTTCAACAAATTGGGCAATGCTTGTGTGATTCACAATCGTGGCATTTAAAG TGCACAAAGTACAAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTA TCTCCTAATAAGTTATGGTGGGAGTGGAGCTGTGCAGTTTCCTGTGTCTTCTGGGGTCTGAGTGAAGATAGCAGGGATGCTGTGTTCACC CTTCTTGGTAGAAGCTAAGGTGTGAGCTGGGAGGTTGCTGGACAGGATGGGGGACCCCAGAAGTCCTTTATCTGTGCTCTCTGCCCGCCA GTGCCTTACAATTTGCAAACGTGTATAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATACATAAGGGGCTT TCTCTCCCTTTTCAGCCCTCTCTGTGCAGAGAAAAGATGTGAGTCCGCTTGATGAATTCTAATGCTTTGCTTAGAGCTATGAGAAATGTT TGTTTTAATAAAAACCTACAGTCCAATAATGCCAATTACAAGGACTTTCTCTGGTTTTTCTCCAAGAGATTCAAATCTGCTGCCATGTTA GCTGTCTTTGCTGTATCTGCTGTAGTACACGAATATGCCTTGGCTGTTTGCTTGAGCTTTTTCTATCCCGTGCTCTTCGTGCTCTTCATG TTCTTTGGAATGGCTTTCAACTTCATTGTCAATGATAGTCGGAAAAAGCCGATTTGGAATGTTCTGATGTGGACTTCTCTTTTCTTGGGC AATGGAGTCTTACTCTGCTTTTATTCTCAAGAATGGTATGCACGTCAGCACTGTCCTCTGAAAAATCCCACATTTTTGGATTATGTCCGG CCACGTTCCTGGACTTGTCGTTACGTGTTTTAGAAGCTTGGACTTTGTTTCCTCCTTGTCACTGAAGATTGGGTAGCTCCCTGATTTGGA GCCAGCTGTTTCCAGTTGTTACTGAAGTTATCTGTGTTATTTGGACCACTCCAGGCTTTACAGATGACTCACTCCATTCCTAGGTCACTT GAAGCCAAACTGTTGGAAGTTCACTGGAGTCTTGTACACTTAAGCAGAGCAGAACTTTTTTTGTGGGGCTGGGTGGGGGGAGAAGACCGA CTAACAGCTGAAGTAATGACAGATTGTTGCTGGGTCATATCAGCTTTATCCCTTGGTAATTATATCTGTTTTGTTTCTTGACTCTGTCCA ATCAGAGAATAAACATCATAGTTTCTTGGCCACTGAATTAGCCAAAACACTTAGGAAGAAATCACTTAAATACCTCTGGCTTAGAAATTT TTTCATGCACACTGTTGGAATGTATGCTAATTGAACATGCAATTGGGGAAGAAAAAATGTAGAATGATTTTTGCTATTTCTAGTAGAAAG AAAATGTCTGTTTTCCAAAGATAATGTTATACATCCTATTTTGTAATTTTTTTGAAAAAAGTTCAATGTTCAGTTTTCCTTAGTTTTTAC CTTGTTTTCTCTATAGGTCATGATTTCTGTGAAGCAAAAAGATGCCTTTTACCATGAATTCTTGAGTTTACATCAATAATATTGTATATT AAGGGGATCAGAAGTAGGAAGGAAAAAATAAGAGATAGCAGAGGAAAAAGAAAAACATTTCCTCTTATAACTTCTGAAGTAATTTGTAAA AAAGATTTGTAGAGTCAATCATGTGTTTAAATTATTTTATCACAAACTTAACATGGAAGATATTCCTTTTTAACTTTGTGGTAACTTCTT TGAAGTTATTTAGAAATATCCTTTGGAACAATTATTTTATTGTCTAATAAATATTGACTTCTCTTGAATTATTTTGCAGACTAGTGAGTC TGTACCATAAGTATTAATCACCTCCACTCATATTAAAGTGATCATTAAGAATCCAGAAGCTGGCTTCTGCATTTGCTCAGTTATACTTTT AATGGTAGTATGTTTTTAGGTGGAATAAATTAATATGTGATTGGTTTCAAGGAAATGTACTCTATTATGTAATACTTCCATTTTATAAGA TGCCCATTTCTAATACAATGTGTGTAGGAATTATTTGTATGTATGAGGTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACC ATGTAGTTCAACTTTCCACTCAAAGTAAGATTTATGAATTATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGG TATTGTTTGGAATTGTTTTAAAGTCAGTTTGAGTCTCACAAGAAGGTAAGTAGAGTTTCTTAATAGTCACAACTTAATTTGAACCACAAG TATCCAGCTTAATCACGTATCTTACTCACGATACCACTGGTCCAGATGAGTTTAGGTAATTTTCAAACATTAAATCCAACTTCAACGGAA ACAAATACACTCAAGGGAAGTTATTTTTAAAAAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGTAATGG AATCATAACCTGCTAACTAGTTTGCTTTAATATGGCTTGTAATTCTTGACATTTTTCTTAAAATTAAAACGAATTTTTATTTTGAATTTA TAACTGCATTTTAAATATATTGGGGACAGATTGCGCTGAGACCTGGTTATGAGCAAGCCAATCTTTTGAATCTAGAGAATGGAATTCTTA GGTTTATATTTCTGTTAAGAAATACTATAAATATGACTCTTATGAGAAGACTTTGTTGCTCTGTAGTGTTTCTGAATACTGTATTTGTTG GATTGATCAAGGCTATTTTTCAAAAAGCTCTCTGCTTCCTGTTTGTTTGTTTGTTTGTTTTTGAGACAGAGTCTTGCTCTGTCGCCGGGG CTGGAGTGCAATGGCGTGAACTCAGCTCACTGCAACCTCTGCCTCCCTGGTTCAAGCTATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGG ATTACAGGGCCACGCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCCTGTTGGTCAGGCTGGTCTCAAACTCCTGACCTT GTGATCTGCCCACCTCAGCCTCCCAAAGTGCTGGGAAGACAGGCGTTAGCCACCGTGCCCGGCCTCTGTTTCCTGTTATTAGTGATTTTC CTGCCCAAGATTGCAACAACAAATATGTAGAACTACAGACTGTTTAGAATGCTGAGACTGTTCTAAGAAACTTTCAAAAACAGTAGCACT TCAAGGAATGGTCACTTTCTATGAAAGAAACTGGTTTGATAGCCATAATCTTATTGCTAGCTGCTTTTAGCAAAAGTCTTTTCTTGAAAC CACCACCTATACTCTTTAAACAAATAAAAACTAAAATCTCTTGCTAATGTTTCAGGAAGATTTATTTTTTCTATTTTGCTATTGTGGCGA AAATTATTTTCAGTTATAGGATACTTTTTTCCTTCTGAAAAGTAATAAGCTTAAAGTTTTTGTTTCTGTAAGATGTAATGATAGTAACTA TTATTTTGGGCATATTAACCAACAGAACAATTATGTAGTATGTATATCACTTTCTCATTAGATCTCTAACTTGACCTTCTAGTACCTTTA TGTGTGAGGATAAATTTGTTAGATCCTTTTATTCTCAATCTTGGATAATGATGCAAAATGGAATTTTGTTTTGTTTGTTGGTAGATTCAC ATACTAAAACTTTGCAGGTAAAGTTGCTTGCCTCATGTTAGAATTTAATTAGAAAACTGAGGCTGCCTTTTTTTTTTTTTTTTTTTTTTT TTAAGACAGAGTCTTGTTCTGTCGCCCAGGCCAGTTTTTTTTTTCTTGTACAGATGGGGTTTTACCATGTTGCTCAGGCTGGTCTCAAAC TCCTGGAGTCAAGGGATCTATTTGCCTCAGCCTCTCAAAGTGCTGGGATTACAGGTGTGAGCCACGGCTCCTGGCTCCTTGCTCCAGAAT CAGTTTTTTAATGGAAGATAGCTCATACTTTGTTTTTGTTTTTAAAGAGACAGGGTCTCACTCTGTTGCCCAGGCTGGTAGTAGCGTGAT CATAGCTCACTGCAGTCTCAAACTCCTGGACTCAAATAGTGCTCTGGAGTACCTAGAACTACAAGTGCCTACCACCACACCCAGCTAATT TATTTGTTTTTTTTTTTTTAGAGATGGGGGGGGTCTCCCTATGTTGCCCAGGCTGGTCTCAAACTCTTCACCTCAAGCAAAACTCCCACT GCAGAAAGCTTTGGGATTACAGGCATGAGCCACCATGCCAAGCCCATACTTATTGTTAATAAAGTTTCAGTGACTTGCTTACTAATCTTA TGCAAAATTTCATGTAATTTATGTAATACTACATAACAATGCTACATATGGTATGTATACATACACTGTATACACACAAAGGTCTGTTCT GGGTATTTTATGTATCTTATCTCTAGGCTTTATGGCTCTGAAATGGAGGGAACTGGACATAAATGTTTCAAGGAATAAAGTGAATGTTTT GTTTGTTTGTTTGTTTTGAGACGGAGTCTCAGTCACCAGGCTGGAGTGCAGTGCTGTGATCTCAGCTCACTGCAACCTCTGCCTCCTGGG TTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGCATTACAGGTGCCTGCCACCATGTCCAGCTAATTTTTGTGTTTTTAGTAGA GATGGGGTTTCACCATGATGGTCAGGCTGGTCTCGAACTCCTGACCTCATGATCCGCCAGCCTCAGCCTCCCATAGTGCTGGGATTATAG GCATGAGCCATGCTCCCGGCCAAAGTGAATGTTTTGGGTGAAGTTTATATAAGGATTTGACTTTTGTATCATTATTAAAGTTTCTGTCAG GTAATACAGTGTTGGCCCTCTGTTGAAATAAAATGTTACATATCGCTGGGTGTAGTGGCTCATGCCTTTAATCCCAGTACTTTGGGAGGC CAAGGCAGGAGGATTGCTTGAGCTCAGAAGTTTGAGACCAGCCTGGGCAACATAGCAAAACCTTGTCACTATAAAAAATACAAAAATTAG CCAGGCGTGGTGGTGCACGCCTGTAGTCTCAGCTACTCAGTCGGCTGAGGTGGGAAGATGGCTTCAAGCCGGGAGATGGAGGCTTCAGTG ACCTGTGACCTGTGATCACACCACTTAATTCCTCAAAACATTTATGTCCCAGTTCCCTCCATTTCAGAGCCATGGGCAACAGAGCGAGAC CCTGTCTCAAAAAAAAAATTACATATAAGCCCGGTTTAAAGAGAGGATAATATGCAACCACCCTAGTTGAAACAGAGTGTATCACTTCTT TCTCACCCTAAATTTAATGCCTAGTTTGAAAATCAGTAGACAATAATAAAGTTGATAAGCTTTAGGTTGGTAGGAAAGCTATGTAATCTA TATAGTGTACTAAATCCTTATATGTTTTTGGTAAAAAAAGACTTTAATAGCTAATTTGGACTTCAGAAAATGGGTTAATTTCACGAGTGC ATATCACTTTTGACTATATTAGTCAAGCATATTATTAAAGTTTAAAAAACTCTAAAACTTCTGTACTGTTTTTTTCTTAAGTGCTCTCTT CCTTATTTCTACATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTTTAAGCTAGTAGATACTGCACCATGT CTTGTGGTGGTGTTTTCTTAATGAAATGGAAGCTGTACTTCCTGTTTGTTTTTAAATACTTTTGAAACAGACAGTTCATGTACCCCATCA TTTAGAGATGCAGTTTGAATTTCCATGGAAAAAGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCATTTG GGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTTAATCCATAGTGTTCTGAGCACCAGAAGGGTCATGTAAATCTG >In-frame_ENST00000317173_ENST00000367619_CB529586_MSRA_chr8_10285718_-_SOAT1_chr1_179318058_length(amino acids)=191AA_start in transcript=249_stop in transcript=824 MLSATRRACQLLLLHSLFPVPRMGNSASNIVSPQEALPGRKEQTPVAAKHHVNGNRTVEPFPEGTQMAVFGMGCFWGAERKFWVLKGVYS TQVGFAGGYTSNPTYKEVCSEKTGHAEVVRVVYQPEHMSFEELLKVFWENHDPTQGMRQGNDHGTQYRSAIYPTSAKQMEAALSSKENYQ -------------------------------------------------------------- >In-frame_ENST00000528246_ENST00000539888_CB529586_MSRA_chr8_10285718_-_SOAT1_chr1_179318058_length(transcript)=2169nt_BP=1645nt GAGTGAGAGAGAGAAAGAGGGAGAGAGAGAGGCAGAGGGAGAGCTGAGGAAAGAAAAAAAGGCAAGACTTGGCACAGCTCAGTCAAATCA GCTTCTTTTGTCTGCTTTCTCGGCTTGAGCTTCAGGAAAGAAAACCGTCCTGGGGTACAGAAAAACTCAGAACTTTTTGGTTTTCAAACT TAGAAGGCTTTTTAAGTCTCTTGGGCTATTTGAAAGTGTTGGTACATACAATGACGTTTAGTCACCAGTATTAAGGGAAATAAAAGCCTT TTTCAAAACGAAGCTTCCATAGTGTCCATGCATTTGGGAAATACTATATTTGATTTTTTGCATGTATGATTATACCATGAGAGACAGGAT TAATATAGAAGATGGCAAGGCAAATTTCTAATTAGAGGGAATATTAATTTTCTACAAAATAAAGTTTGTTCATCAATACAAACCTGCTTT CAAATCAAATCAGAAAGACATCCTTCGGAATGTGTTCAGAACCAATTAGTGACAACACTGAAGACCAGAAAGGCAAGCTGAAGACACCAG ACTTCGCTTGAAGGGCAAACAAGAAATCCAAACATCATGTCAATGGCAACAGAACAGTCGAACCTTTCCCAGAGGGAACACAGATGGCTG TATTTGGAATGGGATGTTTCTGGGGAGCTGAAAGGAAATTCTGGGTCTTGAAAGGAGTGTATTCAACTCAAGTTGGTTTTGCAGGAGGCT ATACTTCAAATCCTACTTATAAAGAAGTCTGCTCAGAAAAAACTGGCCATGCAGAAGTCGTCCGAGTGGTGTACCAGCCAGAACACATGA GTTTTGAGGAACTGCTCAAGGTCTTCTGGGAGAATCACGACCCGACCCAAGGTATGCGCCAGGGGAACGACCATGGCACTCAGTACCGCT CGGCCATCTACCCGACCTCTGCCAAGCAAATGGAGGCAGCCCTGAGCTCCAAAGAGAACTACCAAAAGACTATGCGGAAGACTACCACCA GCAGTACCTGAGCAAGAACCCCAATGGCTACTGCGGCCTTGGGGGCACCGGCGTGTCCTGCCCAGTGGGTATTAAAAAATAATTTCTCCC CACATGGTGGGCCTTTGAGGTTCCAGTAAAAATGCTTTCAACAAATTGGGCAATGCTTGTGTGATTCACAATCGTGGCATTTAAAGTGCA CAAAGTACAAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC CTAATAAGTTATGGTGGGAGTGGAGCTGTGCAGTTTCCTGTGTCTTCTGGGGTCTGAGTGAAGATAGCAGGGATGCTGTGTTCACCCTTC TTGGTAGAAGCTAAGGTGTGAGCTGGGAGGTTGCTGGACAGGATGGGGGACCCCAGAAGTCCTTTATCTGTGCTCTCTGCCCGCCAGTGC CTTACAATTTGCAAACGTGTATAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATACATAAGGGGCTTTCTC TCCCTTTTCAGCCCTCTCTGTGCAGAGAAAAGATGTGAGTCCGCTTGATGAATTCTAATGCTTTGCTTAGAGCTATGAGAAATGTTTGTT TTAATAAAAACCTACAGTCCAATAATTACAAGGACTTTCTCTGGTTTTTCTCCAAGAGATTCAAATCTGCTGCCATGTTAGCTGTCTTTG CTGTATCTGCTGTAGTACACGAATATGCCTTGGCTGTTTGCTTGAGCTTTTTCTATCCCGTGCTCTTCGTGCTCTTCATGTTCTTTGGAA TGGCTTTCAACTTCATTGTCAATGATAGTCGGAAAAAGCCGATTTGGAATGTTCTGATGTGGACTTCTCTTTTCTTGGGCAATGGAGTCT TACTCTGCTTTTATTCTCAAGAATGGTATGCACGTCAGCACTGTCCTCTGAAAAATCCCACATTTTTGGATTATGTCCGGCCACGTTCCT GGACTTGTCGTTACGTGTTTTAGAAGCTTGGACTTTGTTTCCTCCTTGTCACTGAAGATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTT TCCAGTTGTTACTGAAGTTATCTGTGTTATTTGGACCACTCCAGGCTTTACAGATGACTCACTCCATTCCTAGGTCACTTGAAGCCAAAC >In-frame_ENST00000528246_ENST00000539888_CB529586_MSRA_chr8_10285718_-_SOAT1_chr1_179318058_length(amino acids)=142AA_start in transcript=1574_stop in transcript=2002 MMNSNALLRAMRNVCFNKNLQSNNYKDFLWFFSKRFKSAAMLAVFAVSAVVHEYALAVCLSFFYPVLFVLFMFFGMAFNFIVNDSRKKPI -------------------------------------------------------------- >In-frame_ENST00000528246_ENST00000535686_CB529586_MSRA_chr8_10285718_-_SOAT1_chr1_179318058_length(transcript)=2224nt_BP=1645nt GAGTGAGAGAGAGAAAGAGGGAGAGAGAGAGGCAGAGGGAGAGCTGAGGAAAGAAAAAAAGGCAAGACTTGGCACAGCTCAGTCAAATCA GCTTCTTTTGTCTGCTTTCTCGGCTTGAGCTTCAGGAAAGAAAACCGTCCTGGGGTACAGAAAAACTCAGAACTTTTTGGTTTTCAAACT TAGAAGGCTTTTTAAGTCTCTTGGGCTATTTGAAAGTGTTGGTACATACAATGACGTTTAGTCACCAGTATTAAGGGAAATAAAAGCCTT TTTCAAAACGAAGCTTCCATAGTGTCCATGCATTTGGGAAATACTATATTTGATTTTTTGCATGTATGATTATACCATGAGAGACAGGAT TAATATAGAAGATGGCAAGGCAAATTTCTAATTAGAGGGAATATTAATTTTCTACAAAATAAAGTTTGTTCATCAATACAAACCTGCTTT CAAATCAAATCAGAAAGACATCCTTCGGAATGTGTTCAGAACCAATTAGTGACAACACTGAAGACCAGAAAGGCAAGCTGAAGACACCAG ACTTCGCTTGAAGGGCAAACAAGAAATCCAAACATCATGTCAATGGCAACAGAACAGTCGAACCTTTCCCAGAGGGAACACAGATGGCTG TATTTGGAATGGGATGTTTCTGGGGAGCTGAAAGGAAATTCTGGGTCTTGAAAGGAGTGTATTCAACTCAAGTTGGTTTTGCAGGAGGCT ATACTTCAAATCCTACTTATAAAGAAGTCTGCTCAGAAAAAACTGGCCATGCAGAAGTCGTCCGAGTGGTGTACCAGCCAGAACACATGA GTTTTGAGGAACTGCTCAAGGTCTTCTGGGAGAATCACGACCCGACCCAAGGTATGCGCCAGGGGAACGACCATGGCACTCAGTACCGCT CGGCCATCTACCCGACCTCTGCCAAGCAAATGGAGGCAGCCCTGAGCTCCAAAGAGAACTACCAAAAGACTATGCGGAAGACTACCACCA GCAGTACCTGAGCAAGAACCCCAATGGCTACTGCGGCCTTGGGGGCACCGGCGTGTCCTGCCCAGTGGGTATTAAAAAATAATTTCTCCC CACATGGTGGGCCTTTGAGGTTCCAGTAAAAATGCTTTCAACAAATTGGGCAATGCTTGTGTGATTCACAATCGTGGCATTTAAAGTGCA CAAAGTACAAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC CTAATAAGTTATGGTGGGAGTGGAGCTGTGCAGTTTCCTGTGTCTTCTGGGGTCTGAGTGAAGATAGCAGGGATGCTGTGTTCACCCTTC TTGGTAGAAGCTAAGGTGTGAGCTGGGAGGTTGCTGGACAGGATGGGGGACCCCAGAAGTCCTTTATCTGTGCTCTCTGCCCGCCAGTGC CTTACAATTTGCAAACGTGTATAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATACATAAGGGGCTTTCTC TCCCTTTTCAGCCCTCTCTGTGCAGAGAAAAGATGTGAGTCCGCTTGATGAATTCTAATGCTTTGCTTAGAGCTATGAGAAATGTTTGTT TTAATAAAAACCTACAGTCCAATAATTACAAGGACTTTCTCTGGTTTTTCTCCAAGAGATTCAAATCTGCTGCCATGTTAGCTGTCTTTG CTGTATCTGCTGTAGTACACGAATATGCCTTGGCTGTTTGCTTGAGCTTTTTCTATCCCGTGCTCTTCGTGCTCTTCATGTTCTTTGGAA TGGCTTTCAACTTCATTGTCAATGATAGTCGGAAAAAGCCGATTTGGAATGTTCTGATGTGGACTTCTCTTTTCTTGGGCAATGGAGTCT TACTCTGCTTTTATTCTCAAGAATGGTATGCACGTCAGCACTGTCCTCTGAAAAATCCCACATTTTTGGATTATGTCCGGCCACGTTCCT GGACTTGTCGTTACGTGTTTTAGAAGCTTGGACTTTGTTTCCTCCTTGTCACTGAAGATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTT TCCAGTTGTTACTGAAGTTATCTGTGTTATTTGGACCACTCCAGGCTTTACAGATGACTCACTCCATTCCTAGGTCACTTGAAGCCAAAC >In-frame_ENST00000528246_ENST00000535686_CB529586_MSRA_chr8_10285718_-_SOAT1_chr1_179318058_length(amino acids)=142AA_start in transcript=1574_stop in transcript=2002 MMNSNALLRAMRNVCFNKNLQSNNYKDFLWFFSKRFKSAAMLAVFAVSAVVHEYALAVCLSFFYPVLFVLFMFFGMAFNFIVNDSRKKPI -------------------------------------------------------------- >In-frame_ENST00000528246_ENST00000540564_CB529586_MSRA_chr8_10285718_-_SOAT1_chr1_179318058_length(transcript)=2365nt_BP=1645nt GAGTGAGAGAGAGAAAGAGGGAGAGAGAGAGGCAGAGGGAGAGCTGAGGAAAGAAAAAAAGGCAAGACTTGGCACAGCTCAGTCAAATCA GCTTCTTTTGTCTGCTTTCTCGGCTTGAGCTTCAGGAAAGAAAACCGTCCTGGGGTACAGAAAAACTCAGAACTTTTTGGTTTTCAAACT TAGAAGGCTTTTTAAGTCTCTTGGGCTATTTGAAAGTGTTGGTACATACAATGACGTTTAGTCACCAGTATTAAGGGAAATAAAAGCCTT TTTCAAAACGAAGCTTCCATAGTGTCCATGCATTTGGGAAATACTATATTTGATTTTTTGCATGTATGATTATACCATGAGAGACAGGAT TAATATAGAAGATGGCAAGGCAAATTTCTAATTAGAGGGAATATTAATTTTCTACAAAATAAAGTTTGTTCATCAATACAAACCTGCTTT CAAATCAAATCAGAAAGACATCCTTCGGAATGTGTTCAGAACCAATTAGTGACAACACTGAAGACCAGAAAGGCAAGCTGAAGACACCAG ACTTCGCTTGAAGGGCAAACAAGAAATCCAAACATCATGTCAATGGCAACAGAACAGTCGAACCTTTCCCAGAGGGAACACAGATGGCTG TATTTGGAATGGGATGTTTCTGGGGAGCTGAAAGGAAATTCTGGGTCTTGAAAGGAGTGTATTCAACTCAAGTTGGTTTTGCAGGAGGCT ATACTTCAAATCCTACTTATAAAGAAGTCTGCTCAGAAAAAACTGGCCATGCAGAAGTCGTCCGAGTGGTGTACCAGCCAGAACACATGA GTTTTGAGGAACTGCTCAAGGTCTTCTGGGAGAATCACGACCCGACCCAAGGTATGCGCCAGGGGAACGACCATGGCACTCAGTACCGCT CGGCCATCTACCCGACCTCTGCCAAGCAAATGGAGGCAGCCCTGAGCTCCAAAGAGAACTACCAAAAGACTATGCGGAAGACTACCACCA GCAGTACCTGAGCAAGAACCCCAATGGCTACTGCGGCCTTGGGGGCACCGGCGTGTCCTGCCCAGTGGGTATTAAAAAATAATTTCTCCC CACATGGTGGGCCTTTGAGGTTCCAGTAAAAATGCTTTCAACAAATTGGGCAATGCTTGTGTGATTCACAATCGTGGCATTTAAAGTGCA CAAAGTACAAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC CTAATAAGTTATGGTGGGAGTGGAGCTGTGCAGTTTCCTGTGTCTTCTGGGGTCTGAGTGAAGATAGCAGGGATGCTGTGTTCACCCTTC TTGGTAGAAGCTAAGGTGTGAGCTGGGAGGTTGCTGGACAGGATGGGGGACCCCAGAAGTCCTTTATCTGTGCTCTCTGCCCGCCAGTGC CTTACAATTTGCAAACGTGTATAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATACATAAGGGGCTTTCTC TCCCTTTTCAGCCCTCTCTGTGCAGAGAAAAGATGTGAGTCCGCTTGATGAATTCTAATGCTTTGCTTAGAGCTATGAGAAATGTTTGTT TTAATAAAAACCTACAGTCCAATAATTACAAGGACTTTCTCTGGTTTTTCTCCAAGAGATTCAAATCTGCTGCCATGTTAGCTGTCTTTG CTGTATCTGCTGTAGTACACGAATATGCCTTGGCTGTTTGCTTGAGCTTTTTCTATCCCGTGCTCTTCGTGCTCTTCATGTTCTTTGGAA TGGCTTTCAACTTCATTGTCAATGATAGTCGGAAAAAGCCGATTTGGAATGTTCTGATGTGGACTTCTCTTTTCTTGGGCAATGGAGTCT TACTCTGCTTTTATTCTCAAGAATGGTATGCACGTCAGCACTGTCCTCTGAAAAATCCCACATTTTTGGATTATGTCCGGCCACGTTCCT GGACTTGTCGTTACGTGTTTTAGAAGCTTGGACTTTGTTTCCTCCTTGTCACTGAAGATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTT TCCAGTTGTTACTGAAGTTATCTGTGTTATTTGGACCACTCCAGGCTTTACAGATGACTCACTCCATTCCTAGGTCACTTGAAGCCAAAC TGTTGGAAGTTCACTGGAGTCTTGTACACTTAAGCAGAGCAGAACTTTTTTTGTGGGGCTGGGTGGGGGGAGAAGACCGACTAACAGCTG AAGTAATGACAGATTGTTGCTGGGTCATATCAGCTTTATCCCTTGGTAATTATATCTGTTTTGTTTCTTGACTCTGTCCAATCAGAGAAT >In-frame_ENST00000528246_ENST00000540564_CB529586_MSRA_chr8_10285718_-_SOAT1_chr1_179318058_length(amino acids)=142AA_start in transcript=1574_stop in transcript=2002 MMNSNALLRAMRNVCFNKNLQSNNYKDFLWFFSKRFKSAAMLAVFAVSAVVHEYALAVCLSFFYPVLFVLFMFFGMAFNFIVNDSRKKPI -------------------------------------------------------------- >In-frame_ENST00000528246_ENST00000367619_CB529586_MSRA_chr8_10285718_-_SOAT1_chr1_179318058_length(transcript)=7042nt_BP=1645nt GAGTGAGAGAGAGAAAGAGGGAGAGAGAGAGGCAGAGGGAGAGCTGAGGAAAGAAAAAAAGGCAAGACTTGGCACAGCTCAGTCAAATCA GCTTCTTTTGTCTGCTTTCTCGGCTTGAGCTTCAGGAAAGAAAACCGTCCTGGGGTACAGAAAAACTCAGAACTTTTTGGTTTTCAAACT TAGAAGGCTTTTTAAGTCTCTTGGGCTATTTGAAAGTGTTGGTACATACAATGACGTTTAGTCACCAGTATTAAGGGAAATAAAAGCCTT TTTCAAAACGAAGCTTCCATAGTGTCCATGCATTTGGGAAATACTATATTTGATTTTTTGCATGTATGATTATACCATGAGAGACAGGAT TAATATAGAAGATGGCAAGGCAAATTTCTAATTAGAGGGAATATTAATTTTCTACAAAATAAAGTTTGTTCATCAATACAAACCTGCTTT CAAATCAAATCAGAAAGACATCCTTCGGAATGTGTTCAGAACCAATTAGTGACAACACTGAAGACCAGAAAGGCAAGCTGAAGACACCAG ACTTCGCTTGAAGGGCAAACAAGAAATCCAAACATCATGTCAATGGCAACAGAACAGTCGAACCTTTCCCAGAGGGAACACAGATGGCTG TATTTGGAATGGGATGTTTCTGGGGAGCTGAAAGGAAATTCTGGGTCTTGAAAGGAGTGTATTCAACTCAAGTTGGTTTTGCAGGAGGCT ATACTTCAAATCCTACTTATAAAGAAGTCTGCTCAGAAAAAACTGGCCATGCAGAAGTCGTCCGAGTGGTGTACCAGCCAGAACACATGA GTTTTGAGGAACTGCTCAAGGTCTTCTGGGAGAATCACGACCCGACCCAAGGTATGCGCCAGGGGAACGACCATGGCACTCAGTACCGCT CGGCCATCTACCCGACCTCTGCCAAGCAAATGGAGGCAGCCCTGAGCTCCAAAGAGAACTACCAAAAGACTATGCGGAAGACTACCACCA GCAGTACCTGAGCAAGAACCCCAATGGCTACTGCGGCCTTGGGGGCACCGGCGTGTCCTGCCCAGTGGGTATTAAAAAATAATTTCTCCC CACATGGTGGGCCTTTGAGGTTCCAGTAAAAATGCTTTCAACAAATTGGGCAATGCTTGTGTGATTCACAATCGTGGCATTTAAAGTGCA CAAAGTACAAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC CTAATAAGTTATGGTGGGAGTGGAGCTGTGCAGTTTCCTGTGTCTTCTGGGGTCTGAGTGAAGATAGCAGGGATGCTGTGTTCACCCTTC TTGGTAGAAGCTAAGGTGTGAGCTGGGAGGTTGCTGGACAGGATGGGGGACCCCAGAAGTCCTTTATCTGTGCTCTCTGCCCGCCAGTGC CTTACAATTTGCAAACGTGTATAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATACATAAGGGGCTTTCTC TCCCTTTTCAGCCCTCTCTGTGCAGAGAAAAGATGTGAGTCCGCTTGATGAATTCTAATGCTTTGCTTAGAGCTATGAGAAATGTTTGTT TTAATAAAAACCTACAGTCCAATAATTACAAGGACTTTCTCTGGTTTTTCTCCAAGAGATTCAAATCTGCTGCCATGTTAGCTGTCTTTG CTGTATCTGCTGTAGTACACGAATATGCCTTGGCTGTTTGCTTGAGCTTTTTCTATCCCGTGCTCTTCGTGCTCTTCATGTTCTTTGGAA TGGCTTTCAACTTCATTGTCAATGATAGTCGGAAAAAGCCGATTTGGAATGTTCTGATGTGGACTTCTCTTTTCTTGGGCAATGGAGTCT TACTCTGCTTTTATTCTCAAGAATGGTATGCACGTCAGCACTGTCCTCTGAAAAATCCCACATTTTTGGATTATGTCCGGCCACGTTCCT GGACTTGTCGTTACGTGTTTTAGAAGCTTGGACTTTGTTTCCTCCTTGTCACTGAAGATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTT TCCAGTTGTTACTGAAGTTATCTGTGTTATTTGGACCACTCCAGGCTTTACAGATGACTCACTCCATTCCTAGGTCACTTGAAGCCAAAC TGTTGGAAGTTCACTGGAGTCTTGTACACTTAAGCAGAGCAGAACTTTTTTTGTGGGGCTGGGTGGGGGGAGAAGACCGACTAACAGCTG AAGTAATGACAGATTGTTGCTGGGTCATATCAGCTTTATCCCTTGGTAATTATATCTGTTTTGTTTCTTGACTCTGTCCAATCAGAGAAT AAACATCATAGTTTCTTGGCCACTGAATTAGCCAAAACACTTAGGAAGAAATCACTTAAATACCTCTGGCTTAGAAATTTTTTCATGCAC ACTGTTGGAATGTATGCTAATTGAACATGCAATTGGGGAAGAAAAAATGTAGAATGATTTTTGCTATTTCTAGTAGAAAGAAAATGTCTG TTTTCCAAAGATAATGTTATACATCCTATTTTGTAATTTTTTTGAAAAAAGTTCAATGTTCAGTTTTCCTTAGTTTTTACCTTGTTTTCT CTATAGGTCATGATTTCTGTGAAGCAAAAAGATGCCTTTTACCATGAATTCTTGAGTTTACATCAATAATATTGTATATTAAGGGGATCA GAAGTAGGAAGGAAAAAATAAGAGATAGCAGAGGAAAAAGAAAAACATTTCCTCTTATAACTTCTGAAGTAATTTGTAAAAAAGATTTGT AGAGTCAATCATGTGTTTAAATTATTTTATCACAAACTTAACATGGAAGATATTCCTTTTTAACTTTGTGGTAACTTCTTTGAAGTTATT TAGAAATATCCTTTGGAACAATTATTTTATTGTCTAATAAATATTGACTTCTCTTGAATTATTTTGCAGACTAGTGAGTCTGTACCATAA GTATTAATCACCTCCACTCATATTAAAGTGATCATTAAGAATCCAGAAGCTGGCTTCTGCATTTGCTCAGTTATACTTTTAATGGTAGTA TGTTTTTAGGTGGAATAAATTAATATGTGATTGGTTTCAAGGAAATGTACTCTATTATGTAATACTTCCATTTTATAAGATGCCCATTTC TAATACAATGTGTGTAGGAATTATTTGTATGTATGAGGTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCA ACTTTCCACTCAAAGTAAGATTTATGAATTATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATTGTTTGG AATTGTTTTAAAGTCAGTTTGAGTCTCACAAGAAGGTAAGTAGAGTTTCTTAATAGTCACAACTTAATTTGAACCACAAGTATCCAGCTT AATCACGTATCTTACTCACGATACCACTGGTCCAGATGAGTTTAGGTAATTTTCAAACATTAAATCCAACTTCAACGGAAACAAATACAC TCAAGGGAAGTTATTTTTAAAAAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGTAATGGAATCATAACC TGCTAACTAGTTTGCTTTAATATGGCTTGTAATTCTTGACATTTTTCTTAAAATTAAAACGAATTTTTATTTTGAATTTATAACTGCATT TTAAATATATTGGGGACAGATTGCGCTGAGACCTGGTTATGAGCAAGCCAATCTTTTGAATCTAGAGAATGGAATTCTTAGGTTTATATT TCTGTTAAGAAATACTATAAATATGACTCTTATGAGAAGACTTTGTTGCTCTGTAGTGTTTCTGAATACTGTATTTGTTGGATTGATCAA GGCTATTTTTCAAAAAGCTCTCTGCTTCCTGTTTGTTTGTTTGTTTGTTTTTGAGACAGAGTCTTGCTCTGTCGCCGGGGCTGGAGTGCA ATGGCGTGAACTCAGCTCACTGCAACCTCTGCCTCCCTGGTTCAAGCTATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGGC CACGCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCCTGTTGGTCAGGCTGGTCTCAAACTCCTGACCTTGTGATCTGCC CACCTCAGCCTCCCAAAGTGCTGGGAAGACAGGCGTTAGCCACCGTGCCCGGCCTCTGTTTCCTGTTATTAGTGATTTTCCTGCCCAAGA TTGCAACAACAAATATGTAGAACTACAGACTGTTTAGAATGCTGAGACTGTTCTAAGAAACTTTCAAAAACAGTAGCACTTCAAGGAATG GTCACTTTCTATGAAAGAAACTGGTTTGATAGCCATAATCTTATTGCTAGCTGCTTTTAGCAAAAGTCTTTTCTTGAAACCACCACCTAT ACTCTTTAAACAAATAAAAACTAAAATCTCTTGCTAATGTTTCAGGAAGATTTATTTTTTCTATTTTGCTATTGTGGCGAAAATTATTTT CAGTTATAGGATACTTTTTTCCTTCTGAAAAGTAATAAGCTTAAAGTTTTTGTTTCTGTAAGATGTAATGATAGTAACTATTATTTTGGG CATATTAACCAACAGAACAATTATGTAGTATGTATATCACTTTCTCATTAGATCTCTAACTTGACCTTCTAGTACCTTTATGTGTGAGGA TAAATTTGTTAGATCCTTTTATTCTCAATCTTGGATAATGATGCAAAATGGAATTTTGTTTTGTTTGTTGGTAGATTCACATACTAAAAC TTTGCAGGTAAAGTTGCTTGCCTCATGTTAGAATTTAATTAGAAAACTGAGGCTGCCTTTTTTTTTTTTTTTTTTTTTTTTTAAGACAGA GTCTTGTTCTGTCGCCCAGGCCAGTTTTTTTTTTCTTGTACAGATGGGGTTTTACCATGTTGCTCAGGCTGGTCTCAAACTCCTGGAGTC AAGGGATCTATTTGCCTCAGCCTCTCAAAGTGCTGGGATTACAGGTGTGAGCCACGGCTCCTGGCTCCTTGCTCCAGAATCAGTTTTTTA ATGGAAGATAGCTCATACTTTGTTTTTGTTTTTAAAGAGACAGGGTCTCACTCTGTTGCCCAGGCTGGTAGTAGCGTGATCATAGCTCAC TGCAGTCTCAAACTCCTGGACTCAAATAGTGCTCTGGAGTACCTAGAACTACAAGTGCCTACCACCACACCCAGCTAATTTATTTGTTTT TTTTTTTTTAGAGATGGGGGGGGTCTCCCTATGTTGCCCAGGCTGGTCTCAAACTCTTCACCTCAAGCAAAACTCCCACTGCAGAAAGCT TTGGGATTACAGGCATGAGCCACCATGCCAAGCCCATACTTATTGTTAATAAAGTTTCAGTGACTTGCTTACTAATCTTATGCAAAATTT CATGTAATTTATGTAATACTACATAACAATGCTACATATGGTATGTATACATACACTGTATACACACAAAGGTCTGTTCTGGGTATTTTA TGTATCTTATCTCTAGGCTTTATGGCTCTGAAATGGAGGGAACTGGACATAAATGTTTCAAGGAATAAAGTGAATGTTTTGTTTGTTTGT TTGTTTTGAGACGGAGTCTCAGTCACCAGGCTGGAGTGCAGTGCTGTGATCTCAGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGAT TCTCCTGCCTCAGCCTCCCGAGTAGCTGGCATTACAGGTGCCTGCCACCATGTCCAGCTAATTTTTGTGTTTTTAGTAGAGATGGGGTTT CACCATGATGGTCAGGCTGGTCTCGAACTCCTGACCTCATGATCCGCCAGCCTCAGCCTCCCATAGTGCTGGGATTATAGGCATGAGCCA TGCTCCCGGCCAAAGTGAATGTTTTGGGTGAAGTTTATATAAGGATTTGACTTTTGTATCATTATTAAAGTTTCTGTCAGGTAATACAGT GTTGGCCCTCTGTTGAAATAAAATGTTACATATCGCTGGGTGTAGTGGCTCATGCCTTTAATCCCAGTACTTTGGGAGGCCAAGGCAGGA GGATTGCTTGAGCTCAGAAGTTTGAGACCAGCCTGGGCAACATAGCAAAACCTTGTCACTATAAAAAATACAAAAATTAGCCAGGCGTGG TGGTGCACGCCTGTAGTCTCAGCTACTCAGTCGGCTGAGGTGGGAAGATGGCTTCAAGCCGGGAGATGGAGGCTTCAGTGACCTGTGACC TGTGATCACACCACTTAATTCCTCAAAACATTTATGTCCCAGTTCCCTCCATTTCAGAGCCATGGGCAACAGAGCGAGACCCTGTCTCAA AAAAAAAATTACATATAAGCCCGGTTTAAAGAGAGGATAATATGCAACCACCCTAGTTGAAACAGAGTGTATCACTTCTTTCTCACCCTA AATTTAATGCCTAGTTTGAAAATCAGTAGACAATAATAAAGTTGATAAGCTTTAGGTTGGTAGGAAAGCTATGTAATCTATATAGTGTAC TAAATCCTTATATGTTTTTGGTAAAAAAAGACTTTAATAGCTAATTTGGACTTCAGAAAATGGGTTAATTTCACGAGTGCATATCACTTT TGACTATATTAGTCAAGCATATTATTAAAGTTTAAAAAACTCTAAAACTTCTGTACTGTTTTTTTCTTAAGTGCTCTCTTCCTTATTTCT ACATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTTTAAGCTAGTAGATACTGCACCATGTCTTGTGGTGG TGTTTTCTTAATGAAATGGAAGCTGTACTTCCTGTTTGTTTTTAAATACTTTTGAAACAGACAGTTCATGTACCCCATCATTTAGAGATG CAGTTTGAATTTCCATGGAAAAAGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCATTTGGGGTAATGCA GCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTTAATCCATAGTGTTCTGAGCACCAGAAGGGTCATGTAAATCTGAAGTTGTTAT >In-frame_ENST00000528246_ENST00000367619_CB529586_MSRA_chr8_10285718_-_SOAT1_chr1_179318058_length(amino acids)=142AA_start in transcript=1574_stop in transcript=2002 MMNSNALLRAMRNVCFNKNLQSNNYKDFLWFFSKRFKSAAMLAVFAVSAVVHEYALAVCLSFFYPVLFVLFMFFGMAFNFIVNDSRKKPI -------------------------------------------------------------- |
Top |
Fusion Gene PPI Analysis for MSRA-SOAT1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
Related Drugs for MSRA-SOAT1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Tgene | SOAT1 | P35610 | DB00973 | Ezetimibe | Inhibitor | Small molecule | Approved |
Tgene | SOAT1 | P35610 | DB00973 | Ezetimibe | Inhibitor | Small molecule | Approved |
Tgene | SOAT1 | P35610 | DB00973 | Ezetimibe | Inhibitor | Small molecule | Approved |
Tgene | SOAT1 | P35610 | DB00973 | Ezetimibe | Inhibitor | Small molecule | Approved |
Tgene | SOAT1 | P35610 | DB00973 | Ezetimibe | Inhibitor | Small molecule | Approved |
Tgene | SOAT1 | P35610 | DB00973 | Ezetimibe | Inhibitor | Small molecule | Approved |
Tgene | SOAT1 | P35610 | DB00973 | Ezetimibe | Inhibitor | Small molecule | Approved |
Top |
Related Diseases for MSRA-SOAT1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | MSRA | C0036341 | Schizophrenia | 2 | PSYGENET |
Hgene | MSRA | C0013146 | Drug abuse | 1 | CTD_human |
Hgene | MSRA | C0013170 | Drug habituation | 1 | CTD_human |
Hgene | MSRA | C0013222 | Drug Use Disorders | 1 | CTD_human |
Hgene | MSRA | C0029231 | Organic Mental Disorders, Substance-Induced | 1 | CTD_human |
Hgene | MSRA | C0038580 | Substance Dependence | 1 | CTD_human |
Hgene | MSRA | C0038586 | Substance Use Disorders | 1 | CTD_human |
Hgene | MSRA | C0236969 | Substance-Related Disorders | 1 | CTD_human |
Hgene | MSRA | C0740858 | Substance abuse problem | 1 | CTD_human |
Hgene | MSRA | C1510472 | Drug Dependence | 1 | CTD_human |
Hgene | MSRA | C4316881 | Prescription Drug Abuse | 1 | CTD_human |
Tgene | SOAT1 | C0023893 | Liver Cirrhosis, Experimental | 1 | CTD_human |