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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:NDRG2-SPARC (FusionGDB2 ID:57654) |
Fusion Gene Summary for NDRG2-SPARC |
Fusion gene summary |
Fusion gene information | Fusion gene name: NDRG2-SPARC | Fusion gene ID: 57654 | Hgene | Tgene | Gene symbol | NDRG2 | SPARC | Gene ID | 57447 | 6678 |
Gene name | NDRG family member 2 | secreted protein acidic and cysteine rich | |
Synonyms | SYLD | BM-40|OI17|ON|ONT | |
Cytomap | 14q11.2 | 5q33.1 | |
Type of gene | protein-coding | protein-coding | |
Description | protein NDRG2N-myc downstream regulator 2N-myc downstream-regulated gene 2 proteinNDR1-related protein NDR2cytoplasmic protein Ndr1syld709613 protein | SPARCbasement-membrane protein 40secreted protein, acidic, cysteine-rich (osteonectin) | |
Modification date | 20200313 | 20200329 | |
UniProtAcc | Q9UN36 | SMAP2,SMOC2 | |
Ensembl transtripts involved in fusion gene | ENST00000403829, ENST00000298687, ENST00000350792, ENST00000397858, ENST00000554104, ENST00000555158, ENST00000553503, ENST00000397853, ENST00000360463, ENST00000556147, ENST00000397856, ENST00000397855, ENST00000554143, ENST00000397851, ENST00000397847, ENST00000298684, ENST00000397844, ENST00000554277, | ENST00000231061, ENST00000537849, | |
Fusion gene scores | * DoF score | 17 X 14 X 3=714 | 34 X 31 X 7=7378 |
# samples | 18 | 38 | |
** MAII score | log2(18/714*10)=-1.98792716769943 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(38/7378*10)=-4.27915846536387 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: NDRG2 [Title/Abstract] AND SPARC [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | NDRG2(21486922)-SPARC(151049345), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | NDRG2-SPARC seems lost the major protein functional domain in Hgene partner, which is a tumor suppressor due to the frame-shifted ORF. NDRG2-SPARC seems lost the major protein functional domain in Tgene partner, which is a tumor suppressor due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | SPARC | GO:0001937 | negative regulation of endothelial cell proliferation | 12867428 |
Tgene | SPARC | GO:0010595 | positive regulation of endothelial cell migration | 12867428 |
Tgene | SPARC | GO:0016525 | negative regulation of angiogenesis | 12867428 |
Tgene | SPARC | GO:0022604 | regulation of cell morphogenesis | 15389586 |
Fusion gene breakpoints across NDRG2 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across SPARC (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | LGG | TCGA-HT-7680-01A | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
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Fusion Gene ORF analysis for NDRG2-SPARC |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000403829 | ENST00000231061 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
5CDS-intron | ENST00000403829 | ENST00000537849 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
Frame-shift | ENST00000298687 | ENST00000231061 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
5CDS-intron | ENST00000298687 | ENST00000537849 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
Frame-shift | ENST00000350792 | ENST00000231061 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
5CDS-intron | ENST00000350792 | ENST00000537849 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
In-frame | ENST00000397858 | ENST00000231061 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
5CDS-intron | ENST00000397858 | ENST00000537849 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
Frame-shift | ENST00000554104 | ENST00000231061 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
5CDS-intron | ENST00000554104 | ENST00000537849 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
Frame-shift | ENST00000555158 | ENST00000231061 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
5CDS-intron | ENST00000555158 | ENST00000537849 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
Frame-shift | ENST00000553503 | ENST00000231061 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
5CDS-intron | ENST00000553503 | ENST00000537849 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
Frame-shift | ENST00000397853 | ENST00000231061 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
5CDS-intron | ENST00000397853 | ENST00000537849 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
In-frame | ENST00000360463 | ENST00000231061 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
5CDS-intron | ENST00000360463 | ENST00000537849 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
In-frame | ENST00000556147 | ENST00000231061 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
5CDS-intron | ENST00000556147 | ENST00000537849 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
Frame-shift | ENST00000397856 | ENST00000231061 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
5CDS-intron | ENST00000397856 | ENST00000537849 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
Frame-shift | ENST00000397855 | ENST00000231061 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
5CDS-intron | ENST00000397855 | ENST00000537849 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
In-frame | ENST00000554143 | ENST00000231061 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
5CDS-intron | ENST00000554143 | ENST00000537849 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
In-frame | ENST00000397851 | ENST00000231061 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
5CDS-intron | ENST00000397851 | ENST00000537849 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
intron-3CDS | ENST00000397847 | ENST00000231061 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
intron-intron | ENST00000397847 | ENST00000537849 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
In-frame | ENST00000298684 | ENST00000231061 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
5CDS-intron | ENST00000298684 | ENST00000537849 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
Frame-shift | ENST00000397844 | ENST00000231061 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
5CDS-intron | ENST00000397844 | ENST00000537849 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
intron-3CDS | ENST00000554277 | ENST00000231061 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
intron-intron | ENST00000554277 | ENST00000537849 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000403829 | NDRG2 | chr14 | 21486922 | - | ENST00000231061 | SPARC | chr5 | 151049345 | - | 3879 | 822 | 9 | 1403 | 464 |
ENST00000397858 | NDRG2 | chr14 | 21486922 | - | ENST00000231061 | SPARC | chr5 | 151049345 | - | 3976 | 919 | 106 | 1500 | 464 |
ENST00000360463 | NDRG2 | chr14 | 21486922 | - | ENST00000231061 | SPARC | chr5 | 151049345 | - | 3977 | 920 | 149 | 1501 | 450 |
ENST00000556147 | NDRG2 | chr14 | 21486922 | - | ENST00000231061 | SPARC | chr5 | 151049345 | - | 4811 | 1754 | 911 | 2335 | 474 |
ENST00000554143 | NDRG2 | chr14 | 21486922 | - | ENST00000231061 | SPARC | chr5 | 151049345 | - | 3911 | 854 | 83 | 1435 | 450 |
ENST00000397851 | NDRG2 | chr14 | 21486922 | - | ENST00000231061 | SPARC | chr5 | 151049345 | - | 3953 | 896 | 83 | 1477 | 464 |
ENST00000298684 | NDRG2 | chr14 | 21486922 | - | ENST00000231061 | SPARC | chr5 | 151049345 | - | 3753 | 696 | 12 | 1277 | 421 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000403829 | ENST00000231061 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - | 0.000912377 | 0.9990876 |
ENST00000397858 | ENST00000231061 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - | 0.001227489 | 0.99877244 |
ENST00000360463 | ENST00000231061 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - | 0.000939825 | 0.9990602 |
ENST00000556147 | ENST00000231061 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - | 0.000996888 | 0.9990031 |
ENST00000554143 | ENST00000231061 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - | 0.000812446 | 0.9991875 |
ENST00000397851 | ENST00000231061 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - | 0.001105991 | 0.99889404 |
ENST00000298684 | ENST00000231061 | NDRG2 | chr14 | 21486922 | - | SPARC | chr5 | 151049345 | - | 0.001139995 | 0.99886 |
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Fusion Genomic Features for NDRG2-SPARC |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for NDRG2-SPARC |
Go to FGviewer for the breakpoints of chr14:21486922-chr5:151049345 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
NDRG2 | SPARC |
FUNCTION: Contributes to the regulation of the Wnt signaling pathway. Down-regulates CTNNB1-mediated transcriptional activation of target genes, such as CCND1, and may thereby act as tumor suppressor. May be involved in dendritic cell and neuron differentiation. {ECO:0000269|PubMed:12845671, ECO:0000269|PubMed:16103061, ECO:0000269|PubMed:21247902}. | 446 |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | SPARC | chr14:21486922 | chr5:151049345 | ENST00000231061 | 4 | 10 | 274_285 | 110.0 | 304.0 | Calcium binding | . | |
Tgene | SPARC | chr14:21486922 | chr5:151049345 | ENST00000231061 | 4 | 10 | 261_296 | 110.0 | 304.0 | Domain | Note=EF-hand |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | SPARC | chr14:21486922 | chr5:151049345 | ENST00000231061 | 4 | 10 | 22_69 | 110.0 | 304.0 | Compositional bias | Note=Asp/Glu-rich (acidic%3B binds calcium) | |
Tgene | SPARC | chr14:21486922 | chr5:151049345 | ENST00000231061 | 4 | 10 | 71_93 | 110.0 | 304.0 | Domain | Note=Follistatin-like | |
Tgene | SPARC | chr14:21486922 | chr5:151049345 | ENST00000231061 | 4 | 10 | 89_151 | 110.0 | 304.0 | Domain | Kazal-like |
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Fusion Gene Sequence for NDRG2-SPARC |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000403829_ENST00000231061_TCGA-HT-7680-01A_NDRG2_chr14_21486922_-_SPARC_chr5_151049345_length(transcript)=3879nt_BP=822nt CTCACCGGGTTGGGGACAGGGATGGAAAATGGTGGTTCCATGCAGGCCACCATGGCGGAGCTGCAGGAGGTGCAGATCACAGAGGAGAAG CCACTGTTGCCAGGACAGACGCCTGAGGCGGCCAAGACTCACTCTGTGGAGACACCATACGGCTCTGTCACTTTCACTGTCTATGGCACC CCCAAACCCAAACGCCCAGCGATCCTTACCTACCACGATGTGGGACTCAACTATAAATCTTGCTTCCAGCCACTGTTTCAGTTCGAGGAC ATGCAGGAAATCATTCAGAACTTTGTGCGGGTTCATGTGGATGCCCCTGGAATGGAAGAGGGAGCCCCTGTGTTCCCTTTGGGATATCAG TACCCATCTCTGGACCAGCTTGCAGACATGATCCCTTGCGTCCTGCAGTACCTAAATTTCTCTACAATAATTGGAGTTGGTGTTGGAGCT GGAGCCTACATCCTGGCGAGATATGCTCTTAACCACCCGGACACTGTTGAAGGTCTTGTCCTCATCAACATTGATCCCAATGCCAAGGGT TGGATGGATTGGGCAGCCCACAAGCTAACAGGCCTCACCTCTTCCATTCCGGAGATGATCCTTGGACATCTTTTCAGCCAGGAAGAGCTC TCTGGAAATTCTGAGTTGATACAAAAGTACAGAAATATCATTACACATGCACCCAACCTGGATAACATTGAATTGTACTGGAACAGCTAC AACAACCGCCGAGACCTGAACTTTGAGCGTGGAGGTGATATCACCCTCAGGTGTCCTGTGATGCTGGTGGTAGGAGACCAAGCACCTCAT GAAGATGCAGTGGTGTGCAGCAATGACAACAAGACCTTCGACTCTTCCTGCCACTTCTTTGCCACAAAGTGCACCCTGGAGGGCACCAAG AAGGGCCACAAGCTCCACCTGGACTACATCGGGCCTTGCAAATACATCCCCCCTTGCCTGGACTCTGAGCTGACCGAATTCCCCCTGCGC ATGCGGGACTGGCTCAAGAACGTCCTGGTCACCCTGTATGAGAGGGATGAGGACAACAACCTTCTGACTGAGAAGCAGAAGCTGCGGGTG AAGAAGATCCATGAGAATGAGAAGCGCCTGGAGGCAGGAGACCACCCCGTGGAGCTGCTGGCCCGGGACTTCGAGAAGAACTATAACATG TACATCTTCCCTGTACACTGGCAGTTCGGCCAGCTGGACCAGCACCCCATTGACGGGTACCTCTCCCACACCGAGCTGGCTCCACTGCGT GCTCCCCTCATCCCCATGGAGCATTGCACCACCCGCTTTTTCGAGACCTGTGACCTGGACAATGACAAGTACATCGCCCTGGATGAGTGG GCCGGCTGCTTCGGCATCAAGCAGAAGGATATCGACAAGGATCTTGTGATCTAAATCCACTCCTTCCACAGTACCGGATTCTCTCTTTAA CCCTCCCCTTCGTGTTTCCCCCAATGTTTAAAATGTTTGGATGGTTTGTTGTTCTGCCTGGAGACAAGGTGCTAACATAGATTTAAGTGA ATACATTAACGGTGCTAAAAATGAAAATTCTAACCCAAGACATGACATTCTTAGCTGTAACTTAACTATTAAGGCCTTTTCCACACGCAT TAATAGTCCCATTTTTCTCTTGCCATTTGTAGCTTTGCCCATTGTCTTATTGGCACATGGGTGGACACGGATCTGCTGGGCTCTGCCTTA AACACACATTGCAGCTTCAACTTTTCTCTTTAGTGTTCTGTTTGAAACTAATACTTACCGAGTCAGACTTTGTGTTCATTTCATTTCAGG GTCTTGGCTGCCTGTGGGCTTCCCCAGGTGGCCTGGAGGTGGGCAAAGGGAAGTAACAGACACACGATGTTGTCAAGGATGGTTTTGGGA CTAGAGGCTCAGTGGTGGGAGAGATCCCTGCAGAACCCACCAACCAGAACGTGGTTTGCCTGAGGCTGTAACTGAGAGAAAGATTCTGGG GCTGTGTTATGAAAATATAGACATTCTCACATAAGCCCAGTTCATCACCATTTCCTCCTTTACCTTTCAGTGCAGTTTCTTTTCACATTA GGCTGTTGGTTCAAACTTTTGGGAGCACGGACTGTCAGTTCTCTGGGAAGTGGTCAGCGCATCCTGCAGGGCTTCTCCTCCTCTGTCTTT TGGAGAACCAGGGCTCTTCTCAGGGGCTCTAGGGACTGCCAGGCTGTTTCAGCCAGGAAGGCCAAAATCAAGAGTGAGATGTAGAAAGTT GTAAAATAGAAAAAGTGGAGTTGGTGAATCGGTTGTTCTTTCCTCACATTTGGATGATTGTCATAAGGTTTTTAGCATGTTCCTCCTTTT CTTCACCCTCCCCTTTTTTCTTCTATTAATCAAGAGAAACTTCAAAGTTAATGGGATGGTCGGATCTCACAGGCTGAGAACTCGTTCACC TCCAAGCATTTCATGAAAAAGCTGCTTCTTATTAATCATACAAACTCTCACCATGATGTGAAGAGTTTCACAAATCCTTCAAAATAAAAA GTAATGACTTAGAAACTGCCTTCCTGGGTGATTTGCATGTGTCTTAGTCTTAGTCACCTTATTATCCTGACACAAAAACACATGAGCATA CATGTCTACACATGACTACACAAATGCAAACCTTTGCAAACACATTATGCTTTTGCACACACACACCTGTACACACACACCGGCATGTTT ATACACAGGGAGTGTATGGTTCCTGTAAGCACTAAGTTAGCTGTTTTCATTTAATGACCTGTGGTTTAACCCTTTTGATCACTACCACCA TTATCAGCACCAGACTGAGCAGCTATATCCTTTTATTAATCATGGTCATTCATTCATTCATTCATTCACAAAATATTTATGATGTATTTA CTCTGCACCAGGTCCCATGCCAAGCACTGGGGACACAGTTATGGCAAAGTAGACAAAGCATTTGTTCATTTGGAGCTTAGAGTCCAGGAG GAATACATTAGATAATGACACAATCAAATATAAATTGCAAGATGTCACAGGTGTGATGAAGGGAGAGTAGGAGAGACCATGAGTATGTGT AACAGGAGGACACAGCATTATTCTAGTGCTGTACTGTTCCGTACGGCAGCCACTACCCACATGTAACTTTTTAAGATTTAAATTTAAATT AGTTAACATTCAAAACGCAGCTCCCCAATCACACTAGCAACATTTCAAGTGCTTGAGAGCCATGCATGATTAGTGGTTACCCTATTGAAT AGGTCAGAAGTAGAATCTTTTCATCATCACAGAAAGTTCTATTGGACAGTGCTCTTCTAGATCATCATAAGACTACAGAGCACTTTTCAA AGCTCATGCATGTTCATCATGTTAGTGTCGTATTTTGAGCTGGGGTTTTGAGACTCCCCTTAGAGATAGAGAAACAGACCCAAGAAATGT GCTCAATTGCAATGGGCCACATACCTAGATCTCCAGATGTCATTTCCCCTCTCTTATTTTAAGTTATGTTAAGATTACTAAAACAATAAA AGCTCCTAAAAAATCAAACTGTATTCTGGTGTTCTCTTCTACACAGTGGGAGGGCGAGCAGTAGGAGAGATTGGCCCATTTGGTGCTGGC CATTTGAGGAATGCAAGCCCAGCACTAGTCTCATAATCTCTAGGAATCTGTAGAGAGAGGAATTGAAGTAAATTTCAGCATTGGCTCATT CAGTCATTCGGCGACATTCATCAGGTACCTGCAATGTGTTAGGGGATCTTATGAGTAGGCAGCGTGCGTGATCCTTGCTCCCCTGGAGCT TTCTAACATTCTAGCAGGCAGACCACACATAAATTTGCAATACTGTTTCTGATAAAAACGTGCTGTAAAGGAAATAAAGCAGAGAACTAT >In-frame_ENST00000403829_ENST00000231061_TCGA-HT-7680-01A_NDRG2_chr14_21486922_-_SPARC_chr5_151049345_length(amino acids)=464AA_start in transcript=9_stop in transcript=1403 MGTGMENGGSMQATMAELQEVQITEEKPLLPGQTPEAAKTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQPLFQFEDMQE IIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMD WAAHKLTGLTSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDITLRCPVMLVVGDQAPHEDA VVCSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDEDNNLLTEKQKLRVKKI HENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGC -------------------------------------------------------------- >In-frame_ENST00000397858_ENST00000231061_TCGA-HT-7680-01A_NDRG2_chr14_21486922_-_SPARC_chr5_151049345_length(transcript)=3976nt_BP=919nt CGGCCCCCCGCATTCCCCGCCCCCACCTCCCCGCCTTGTTGTCCAACTTCTCCCGGAGCAGCCGGAGAGCAGGCGTCGGGACGCAGCAAA GAGAGGAGAGGCCACCATGGCGGAGCTGCAGGAGGTGCAGATCACAGAGGAGAAGCCACTGTTGCCAGGACAGACGCCTGAGGCGGCCAA GGAGGCTGAGTTAGCTGCCCGAATCCTCCTGGACCAGGGACAGACTCACTCTGTGGAGACACCATACGGCTCTGTCACTTTCACTGTCTA TGGCACCCCCAAACCCAAACGCCCAGCGATCCTTACCTACCACGATGTGGGACTCAACTATAAATCTTGCTTCCAGCCACTGTTTCAGTT CGAGGACATGCAGGAAATCATTCAGAACTTTGTGCGGGTTCATGTGGATGCCCCTGGAATGGAAGAGGGAGCCCCTGTGTTCCCTTTGGG ATATCAGTACCCATCTCTGGACCAGCTTGCAGACATGATCCCTTGCGTCCTGCAGTACCTAAATTTCTCTACAATAATTGGAGTTGGTGT TGGAGCTGGAGCCTACATCCTGGCGAGATATGCTCTTAACCACCCGGACACTGTTGAAGGTCTTGTCCTCATCAACATTGATCCCAATGC CAAGGGTTGGATGGATTGGGCAGCCCACAAGCTAACAGGCCTCACCTCTTCCATTCCGGAGATGATCCTTGGACATCTTTTCAGCCAGGA AGAGCTCTCTGGAAATTCTGAGTTGATACAAAAGTACAGAAATATCATTACACATGCACCCAACCTGGATAACATTGAATTGTACTGGAA CAGCTACAACAACCGCCGAGACCTGAACTTTGAGCGTGGAGGTGATATCACCCTCAGGTGTCCTGTGATGCTGGTGGTAGGAGACCAAGC ACCTCATGAAGATGCAGTGGTGTGCAGCAATGACAACAAGACCTTCGACTCTTCCTGCCACTTCTTTGCCACAAAGTGCACCCTGGAGGG CACCAAGAAGGGCCACAAGCTCCACCTGGACTACATCGGGCCTTGCAAATACATCCCCCCTTGCCTGGACTCTGAGCTGACCGAATTCCC CCTGCGCATGCGGGACTGGCTCAAGAACGTCCTGGTCACCCTGTATGAGAGGGATGAGGACAACAACCTTCTGACTGAGAAGCAGAAGCT GCGGGTGAAGAAGATCCATGAGAATGAGAAGCGCCTGGAGGCAGGAGACCACCCCGTGGAGCTGCTGGCCCGGGACTTCGAGAAGAACTA TAACATGTACATCTTCCCTGTACACTGGCAGTTCGGCCAGCTGGACCAGCACCCCATTGACGGGTACCTCTCCCACACCGAGCTGGCTCC ACTGCGTGCTCCCCTCATCCCCATGGAGCATTGCACCACCCGCTTTTTCGAGACCTGTGACCTGGACAATGACAAGTACATCGCCCTGGA TGAGTGGGCCGGCTGCTTCGGCATCAAGCAGAAGGATATCGACAAGGATCTTGTGATCTAAATCCACTCCTTCCACAGTACCGGATTCTC TCTTTAACCCTCCCCTTCGTGTTTCCCCCAATGTTTAAAATGTTTGGATGGTTTGTTGTTCTGCCTGGAGACAAGGTGCTAACATAGATT TAAGTGAATACATTAACGGTGCTAAAAATGAAAATTCTAACCCAAGACATGACATTCTTAGCTGTAACTTAACTATTAAGGCCTTTTCCA CACGCATTAATAGTCCCATTTTTCTCTTGCCATTTGTAGCTTTGCCCATTGTCTTATTGGCACATGGGTGGACACGGATCTGCTGGGCTC TGCCTTAAACACACATTGCAGCTTCAACTTTTCTCTTTAGTGTTCTGTTTGAAACTAATACTTACCGAGTCAGACTTTGTGTTCATTTCA TTTCAGGGTCTTGGCTGCCTGTGGGCTTCCCCAGGTGGCCTGGAGGTGGGCAAAGGGAAGTAACAGACACACGATGTTGTCAAGGATGGT TTTGGGACTAGAGGCTCAGTGGTGGGAGAGATCCCTGCAGAACCCACCAACCAGAACGTGGTTTGCCTGAGGCTGTAACTGAGAGAAAGA TTCTGGGGCTGTGTTATGAAAATATAGACATTCTCACATAAGCCCAGTTCATCACCATTTCCTCCTTTACCTTTCAGTGCAGTTTCTTTT CACATTAGGCTGTTGGTTCAAACTTTTGGGAGCACGGACTGTCAGTTCTCTGGGAAGTGGTCAGCGCATCCTGCAGGGCTTCTCCTCCTC TGTCTTTTGGAGAACCAGGGCTCTTCTCAGGGGCTCTAGGGACTGCCAGGCTGTTTCAGCCAGGAAGGCCAAAATCAAGAGTGAGATGTA GAAAGTTGTAAAATAGAAAAAGTGGAGTTGGTGAATCGGTTGTTCTTTCCTCACATTTGGATGATTGTCATAAGGTTTTTAGCATGTTCC TCCTTTTCTTCACCCTCCCCTTTTTTCTTCTATTAATCAAGAGAAACTTCAAAGTTAATGGGATGGTCGGATCTCACAGGCTGAGAACTC GTTCACCTCCAAGCATTTCATGAAAAAGCTGCTTCTTATTAATCATACAAACTCTCACCATGATGTGAAGAGTTTCACAAATCCTTCAAA ATAAAAAGTAATGACTTAGAAACTGCCTTCCTGGGTGATTTGCATGTGTCTTAGTCTTAGTCACCTTATTATCCTGACACAAAAACACAT GAGCATACATGTCTACACATGACTACACAAATGCAAACCTTTGCAAACACATTATGCTTTTGCACACACACACCTGTACACACACACCGG CATGTTTATACACAGGGAGTGTATGGTTCCTGTAAGCACTAAGTTAGCTGTTTTCATTTAATGACCTGTGGTTTAACCCTTTTGATCACT ACCACCATTATCAGCACCAGACTGAGCAGCTATATCCTTTTATTAATCATGGTCATTCATTCATTCATTCATTCACAAAATATTTATGAT GTATTTACTCTGCACCAGGTCCCATGCCAAGCACTGGGGACACAGTTATGGCAAAGTAGACAAAGCATTTGTTCATTTGGAGCTTAGAGT CCAGGAGGAATACATTAGATAATGACACAATCAAATATAAATTGCAAGATGTCACAGGTGTGATGAAGGGAGAGTAGGAGAGACCATGAG TATGTGTAACAGGAGGACACAGCATTATTCTAGTGCTGTACTGTTCCGTACGGCAGCCACTACCCACATGTAACTTTTTAAGATTTAAAT TTAAATTAGTTAACATTCAAAACGCAGCTCCCCAATCACACTAGCAACATTTCAAGTGCTTGAGAGCCATGCATGATTAGTGGTTACCCT ATTGAATAGGTCAGAAGTAGAATCTTTTCATCATCACAGAAAGTTCTATTGGACAGTGCTCTTCTAGATCATCATAAGACTACAGAGCAC TTTTCAAAGCTCATGCATGTTCATCATGTTAGTGTCGTATTTTGAGCTGGGGTTTTGAGACTCCCCTTAGAGATAGAGAAACAGACCCAA GAAATGTGCTCAATTGCAATGGGCCACATACCTAGATCTCCAGATGTCATTTCCCCTCTCTTATTTTAAGTTATGTTAAGATTACTAAAA CAATAAAAGCTCCTAAAAAATCAAACTGTATTCTGGTGTTCTCTTCTACACAGTGGGAGGGCGAGCAGTAGGAGAGATTGGCCCATTTGG TGCTGGCCATTTGAGGAATGCAAGCCCAGCACTAGTCTCATAATCTCTAGGAATCTGTAGAGAGAGGAATTGAAGTAAATTTCAGCATTG GCTCATTCAGTCATTCGGCGACATTCATCAGGTACCTGCAATGTGTTAGGGGATCTTATGAGTAGGCAGCGTGCGTGATCCTTGCTCCCC TGGAGCTTTCTAACATTCTAGCAGGCAGACCACACATAAATTTGCAATACTGTTTCTGATAAAAACGTGCTGTAAAGGAAATAAAGCAGA >In-frame_ENST00000397858_ENST00000231061_TCGA-HT-7680-01A_NDRG2_chr14_21486922_-_SPARC_chr5_151049345_length(amino acids)=464AA_start in transcript=106_stop in transcript=1500 MAELQEVQITEEKPLLPGQTPEAAKEAELAARILLDQGQTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQPLFQFEDMQE IIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMD WAAHKLTGLTSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDITLRCPVMLVVGDQAPHEDA VVCSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDEDNNLLTEKQKLRVKKI HENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGC -------------------------------------------------------------- >In-frame_ENST00000360463_ENST00000231061_TCGA-HT-7680-01A_NDRG2_chr14_21486922_-_SPARC_chr5_151049345_length(transcript)=3977nt_BP=920nt TCTCCCCACCCCCCGCCTGCCCGCGATCGCCCTCTATTTATAGCGGCCCCCCGCATTCCCCGCCCCCACCTCCCCGCCTTGTTGTCCAAC TTCTCCCGGAGCAGCCGGAGAGCAGGCGTCGGGACGCAGCAAAGAGAGGAGAGGCCACCATGGCGGAGCTGCAGGAGGTGCAGATCACAG AGGAGAAGCCACTGTTGCCAGGACAGACGCCTGAGGCGGCCAAGACTCACTCTGTGGAGACACCATACGGCTCTGTCACTTTCACTGTCT ATGGCACCCCCAAACCCAAACGCCCAGCGATCCTTACCTACCACGATGTGGGACTCAACTATAAATCTTGCTTCCAGCCACTGTTTCAGT TCGAGGACATGCAGGAAATCATTCAGAACTTTGTGCGGGTTCATGTGGATGCCCCTGGAATGGAAGAGGGAGCCCCTGTGTTCCCTTTGG GATATCAGTACCCATCTCTGGACCAGCTTGCAGACATGATCCCTTGCGTCCTGCAGTACCTAAATTTCTCTACAATAATTGGAGTTGGTG TTGGAGCTGGAGCCTACATCCTGGCGAGATATGCTCTTAACCACCCGGACACTGTTGAAGGTCTTGTCCTCATCAACATTGATCCCAATG CCAAGGGTTGGATGGATTGGGCAGCCCACAAGCTAACAGGCCTCACCTCTTCCATTCCGGAGATGATCCTTGGACATCTTTTCAGCCAGG AAGAGCTCTCTGGAAATTCTGAGTTGATACAAAAGTACAGAAATATCATTACACATGCACCCAACCTGGATAACATTGAATTGTACTGGA ACAGCTACAACAACCGCCGAGACCTGAACTTTGAGCGTGGAGGTGATATCACCCTCAGGTGTCCTGTGATGCTGGTGGTAGGAGACCAAG CACCTCATGAAGATGCAGTGGTGTGCAGCAATGACAACAAGACCTTCGACTCTTCCTGCCACTTCTTTGCCACAAAGTGCACCCTGGAGG GCACCAAGAAGGGCCACAAGCTCCACCTGGACTACATCGGGCCTTGCAAATACATCCCCCCTTGCCTGGACTCTGAGCTGACCGAATTCC CCCTGCGCATGCGGGACTGGCTCAAGAACGTCCTGGTCACCCTGTATGAGAGGGATGAGGACAACAACCTTCTGACTGAGAAGCAGAAGC TGCGGGTGAAGAAGATCCATGAGAATGAGAAGCGCCTGGAGGCAGGAGACCACCCCGTGGAGCTGCTGGCCCGGGACTTCGAGAAGAACT ATAACATGTACATCTTCCCTGTACACTGGCAGTTCGGCCAGCTGGACCAGCACCCCATTGACGGGTACCTCTCCCACACCGAGCTGGCTC CACTGCGTGCTCCCCTCATCCCCATGGAGCATTGCACCACCCGCTTTTTCGAGACCTGTGACCTGGACAATGACAAGTACATCGCCCTGG ATGAGTGGGCCGGCTGCTTCGGCATCAAGCAGAAGGATATCGACAAGGATCTTGTGATCTAAATCCACTCCTTCCACAGTACCGGATTCT CTCTTTAACCCTCCCCTTCGTGTTTCCCCCAATGTTTAAAATGTTTGGATGGTTTGTTGTTCTGCCTGGAGACAAGGTGCTAACATAGAT TTAAGTGAATACATTAACGGTGCTAAAAATGAAAATTCTAACCCAAGACATGACATTCTTAGCTGTAACTTAACTATTAAGGCCTTTTCC ACACGCATTAATAGTCCCATTTTTCTCTTGCCATTTGTAGCTTTGCCCATTGTCTTATTGGCACATGGGTGGACACGGATCTGCTGGGCT CTGCCTTAAACACACATTGCAGCTTCAACTTTTCTCTTTAGTGTTCTGTTTGAAACTAATACTTACCGAGTCAGACTTTGTGTTCATTTC ATTTCAGGGTCTTGGCTGCCTGTGGGCTTCCCCAGGTGGCCTGGAGGTGGGCAAAGGGAAGTAACAGACACACGATGTTGTCAAGGATGG TTTTGGGACTAGAGGCTCAGTGGTGGGAGAGATCCCTGCAGAACCCACCAACCAGAACGTGGTTTGCCTGAGGCTGTAACTGAGAGAAAG ATTCTGGGGCTGTGTTATGAAAATATAGACATTCTCACATAAGCCCAGTTCATCACCATTTCCTCCTTTACCTTTCAGTGCAGTTTCTTT TCACATTAGGCTGTTGGTTCAAACTTTTGGGAGCACGGACTGTCAGTTCTCTGGGAAGTGGTCAGCGCATCCTGCAGGGCTTCTCCTCCT CTGTCTTTTGGAGAACCAGGGCTCTTCTCAGGGGCTCTAGGGACTGCCAGGCTGTTTCAGCCAGGAAGGCCAAAATCAAGAGTGAGATGT AGAAAGTTGTAAAATAGAAAAAGTGGAGTTGGTGAATCGGTTGTTCTTTCCTCACATTTGGATGATTGTCATAAGGTTTTTAGCATGTTC CTCCTTTTCTTCACCCTCCCCTTTTTTCTTCTATTAATCAAGAGAAACTTCAAAGTTAATGGGATGGTCGGATCTCACAGGCTGAGAACT CGTTCACCTCCAAGCATTTCATGAAAAAGCTGCTTCTTATTAATCATACAAACTCTCACCATGATGTGAAGAGTTTCACAAATCCTTCAA AATAAAAAGTAATGACTTAGAAACTGCCTTCCTGGGTGATTTGCATGTGTCTTAGTCTTAGTCACCTTATTATCCTGACACAAAAACACA TGAGCATACATGTCTACACATGACTACACAAATGCAAACCTTTGCAAACACATTATGCTTTTGCACACACACACCTGTACACACACACCG GCATGTTTATACACAGGGAGTGTATGGTTCCTGTAAGCACTAAGTTAGCTGTTTTCATTTAATGACCTGTGGTTTAACCCTTTTGATCAC TACCACCATTATCAGCACCAGACTGAGCAGCTATATCCTTTTATTAATCATGGTCATTCATTCATTCATTCATTCACAAAATATTTATGA TGTATTTACTCTGCACCAGGTCCCATGCCAAGCACTGGGGACACAGTTATGGCAAAGTAGACAAAGCATTTGTTCATTTGGAGCTTAGAG TCCAGGAGGAATACATTAGATAATGACACAATCAAATATAAATTGCAAGATGTCACAGGTGTGATGAAGGGAGAGTAGGAGAGACCATGA GTATGTGTAACAGGAGGACACAGCATTATTCTAGTGCTGTACTGTTCCGTACGGCAGCCACTACCCACATGTAACTTTTTAAGATTTAAA TTTAAATTAGTTAACATTCAAAACGCAGCTCCCCAATCACACTAGCAACATTTCAAGTGCTTGAGAGCCATGCATGATTAGTGGTTACCC TATTGAATAGGTCAGAAGTAGAATCTTTTCATCATCACAGAAAGTTCTATTGGACAGTGCTCTTCTAGATCATCATAAGACTACAGAGCA CTTTTCAAAGCTCATGCATGTTCATCATGTTAGTGTCGTATTTTGAGCTGGGGTTTTGAGACTCCCCTTAGAGATAGAGAAACAGACCCA AGAAATGTGCTCAATTGCAATGGGCCACATACCTAGATCTCCAGATGTCATTTCCCCTCTCTTATTTTAAGTTATGTTAAGATTACTAAA ACAATAAAAGCTCCTAAAAAATCAAACTGTATTCTGGTGTTCTCTTCTACACAGTGGGAGGGCGAGCAGTAGGAGAGATTGGCCCATTTG GTGCTGGCCATTTGAGGAATGCAAGCCCAGCACTAGTCTCATAATCTCTAGGAATCTGTAGAGAGAGGAATTGAAGTAAATTTCAGCATT GGCTCATTCAGTCATTCGGCGACATTCATCAGGTACCTGCAATGTGTTAGGGGATCTTATGAGTAGGCAGCGTGCGTGATCCTTGCTCCC CTGGAGCTTTCTAACATTCTAGCAGGCAGACCACACATAAATTTGCAATACTGTTTCTGATAAAAACGTGCTGTAAAGGAAATAAAGCAG >In-frame_ENST00000360463_ENST00000231061_TCGA-HT-7680-01A_NDRG2_chr14_21486922_-_SPARC_chr5_151049345_length(amino acids)=450AA_start in transcript=149_stop in transcript=1501 MAELQEVQITEEKPLLPGQTPEAAKTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPG MEEGAPVFPLGYQYPSLDQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIP EMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDITLRCPVMLVVGDQAPHEDAVVCSNDNKTFDSSC HFFATKCTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDEDNNLLTEKQKLRVKKIHENEKRLEAGDHPV ELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQKDIDKDLVI -------------------------------------------------------------- >In-frame_ENST00000556147_ENST00000231061_TCGA-HT-7680-01A_NDRG2_chr14_21486922_-_SPARC_chr5_151049345_length(transcript)=4811nt_BP=1754nt GTGATTGATCCGCGTCCCCTGGAGCTGGAGGCTCGGGGGAAAGGGCCAGCACGGAGCGGGCGCTCGGTTGCTGCGCACAAAGGCTGAGGC TCCAAGAGCTGCAGGGCGTGTTTGGGGTGCGCGCGAGGTTGTGTGCAAGGTCCGGGGCGCTTGGCACCGGCCACGCAAGGGTGTCAGTCT CCACGCGGACGGGCTGCGTAGGGACTCGTAGGGACGGGTTCCGGGTGCTGGGCCCGGCCGGTCTCCTCTGTCCTACCCATCCCTTCCCGA TGGCGCTTGCCTTCGCGGGCCGTCGGGGGAGAACGGGAGAAGATTGTGGGACCGCTCTCCTCTCCCTTTCTCCACTCGTGGGACCTACAC GGAGACTGAGTAGAGGAGAGAAGCGACGGCACCAATCTTTGTGTTTGTTTTTAAATTGTGGAGGGAAACAGCCATGCTCTGCTACCCTCC TCTTACTGGAGAGCTGTCAAAAATTTTGGGGATCCCCTATTCCCCCGCGTTTAGTCCCCCTGCAGATAGAAAATTGAGGCCAAATGTAGT AACTAACTGGGGCAAGGTCACACTGGGAGTGGCAGAGCCGGGATTCGAATCCGGAGGTTCTGACAGGGCCACCCTCTTACCTCCACATCA GCACTTCCTTCTCTCCTCCGCGCAGCCTGAACTGATGCCCTTGTAGCCTATATTGATTCCGGCTCGAGCCTAGAGAGGACGTGTTCTCTG GACTTAGGGGTAGACAGACACTGGGGAGGGTTAGTGACCCGAGGAGGTTGATGACCCTGGGAGTCTGGGTCTTGGCTGAGGCTTTCCGTC CCTGAAAGACCCCAGGTCTGTCTCCCATGTCATTCACCTCGTTGCTGTGTTTTCTCAGACCCCAGAGTCAGAAGGAGTGAGAACCCTGAC CCCTAATCCCACTGCATCCAGCCAATAGGAGCCCAGCCACCATGGCGGAGCTGCAGGAGGTGCAGATCACAGAGGAGAAGCCACTGTTGC CAGGACAGACGCCTGAGGCGGCCAAGGAGGCTGAGTTAGCTGCCCGAATCCTCCTGGACCAGGGACAGACTCACTCTGTGGAGACACCAT ACGGCTCTGTCACTTTCACTGTCTATGGCACCCCCAAACCCAAACGCCCAGCGATCCTTACCTACCACGATGTGGGACTCAACTATAAAT CTTGCTTCCAGCCACTGTTTCAGTTCGAGGACATGCAGGAAATCATTCAGAACTTTGTGCGGGTTCATGTGGATGCCCCTGGAATGGAAG AGGGAGCCCCTGTGTTCCCTTTGGGATATCAGTACCCATCTCTGGACCAGCTTGCAGACATGATCCCTTGCGTCCTGCAGTACCTAAATT TCTCTACAATAATTGGAGTTGGTGTTGGAGCTGGAGCCTACATCCTGGCGAGATATGCTCTTAACCACCCGGACACTGTTGAAGGTCTTG TCCTCATCAACATTGATCCCAATGCCAAGGGTTGGATGGATTGGGCAGCCCACAAGCTAACAGGCCTCACCTCTTCCATTCCGGAGATGA TCCTTGGACATCTTTTCAGCCAGGAAGAGCTCTCTGGAAATTCTGAGTTGATACAAAAGTACAGAAATATCATTACACATGCACCCAACC TGGATAACATTGAATTGTACTGGAACAGCTACAACAACCGCCGAGACCTGAACTTTGAGCGTGGAGGTGATATCACCCTCAGGTGTCCTG TGATGCTGGTGGTAGGAGACCAAGCACCTCATGAAGATGCAGTGGTGTGCAGCAATGACAACAAGACCTTCGACTCTTCCTGCCACTTCT TTGCCACAAAGTGCACCCTGGAGGGCACCAAGAAGGGCCACAAGCTCCACCTGGACTACATCGGGCCTTGCAAATACATCCCCCCTTGCC TGGACTCTGAGCTGACCGAATTCCCCCTGCGCATGCGGGACTGGCTCAAGAACGTCCTGGTCACCCTGTATGAGAGGGATGAGGACAACA ACCTTCTGACTGAGAAGCAGAAGCTGCGGGTGAAGAAGATCCATGAGAATGAGAAGCGCCTGGAGGCAGGAGACCACCCCGTGGAGCTGC TGGCCCGGGACTTCGAGAAGAACTATAACATGTACATCTTCCCTGTACACTGGCAGTTCGGCCAGCTGGACCAGCACCCCATTGACGGGT ACCTCTCCCACACCGAGCTGGCTCCACTGCGTGCTCCCCTCATCCCCATGGAGCATTGCACCACCCGCTTTTTCGAGACCTGTGACCTGG ACAATGACAAGTACATCGCCCTGGATGAGTGGGCCGGCTGCTTCGGCATCAAGCAGAAGGATATCGACAAGGATCTTGTGATCTAAATCC ACTCCTTCCACAGTACCGGATTCTCTCTTTAACCCTCCCCTTCGTGTTTCCCCCAATGTTTAAAATGTTTGGATGGTTTGTTGTTCTGCC TGGAGACAAGGTGCTAACATAGATTTAAGTGAATACATTAACGGTGCTAAAAATGAAAATTCTAACCCAAGACATGACATTCTTAGCTGT AACTTAACTATTAAGGCCTTTTCCACACGCATTAATAGTCCCATTTTTCTCTTGCCATTTGTAGCTTTGCCCATTGTCTTATTGGCACAT GGGTGGACACGGATCTGCTGGGCTCTGCCTTAAACACACATTGCAGCTTCAACTTTTCTCTTTAGTGTTCTGTTTGAAACTAATACTTAC CGAGTCAGACTTTGTGTTCATTTCATTTCAGGGTCTTGGCTGCCTGTGGGCTTCCCCAGGTGGCCTGGAGGTGGGCAAAGGGAAGTAACA GACACACGATGTTGTCAAGGATGGTTTTGGGACTAGAGGCTCAGTGGTGGGAGAGATCCCTGCAGAACCCACCAACCAGAACGTGGTTTG CCTGAGGCTGTAACTGAGAGAAAGATTCTGGGGCTGTGTTATGAAAATATAGACATTCTCACATAAGCCCAGTTCATCACCATTTCCTCC TTTACCTTTCAGTGCAGTTTCTTTTCACATTAGGCTGTTGGTTCAAACTTTTGGGAGCACGGACTGTCAGTTCTCTGGGAAGTGGTCAGC GCATCCTGCAGGGCTTCTCCTCCTCTGTCTTTTGGAGAACCAGGGCTCTTCTCAGGGGCTCTAGGGACTGCCAGGCTGTTTCAGCCAGGA AGGCCAAAATCAAGAGTGAGATGTAGAAAGTTGTAAAATAGAAAAAGTGGAGTTGGTGAATCGGTTGTTCTTTCCTCACATTTGGATGAT TGTCATAAGGTTTTTAGCATGTTCCTCCTTTTCTTCACCCTCCCCTTTTTTCTTCTATTAATCAAGAGAAACTTCAAAGTTAATGGGATG GTCGGATCTCACAGGCTGAGAACTCGTTCACCTCCAAGCATTTCATGAAAAAGCTGCTTCTTATTAATCATACAAACTCTCACCATGATG TGAAGAGTTTCACAAATCCTTCAAAATAAAAAGTAATGACTTAGAAACTGCCTTCCTGGGTGATTTGCATGTGTCTTAGTCTTAGTCACC TTATTATCCTGACACAAAAACACATGAGCATACATGTCTACACATGACTACACAAATGCAAACCTTTGCAAACACATTATGCTTTTGCAC ACACACACCTGTACACACACACCGGCATGTTTATACACAGGGAGTGTATGGTTCCTGTAAGCACTAAGTTAGCTGTTTTCATTTAATGAC CTGTGGTTTAACCCTTTTGATCACTACCACCATTATCAGCACCAGACTGAGCAGCTATATCCTTTTATTAATCATGGTCATTCATTCATT CATTCATTCACAAAATATTTATGATGTATTTACTCTGCACCAGGTCCCATGCCAAGCACTGGGGACACAGTTATGGCAAAGTAGACAAAG CATTTGTTCATTTGGAGCTTAGAGTCCAGGAGGAATACATTAGATAATGACACAATCAAATATAAATTGCAAGATGTCACAGGTGTGATG AAGGGAGAGTAGGAGAGACCATGAGTATGTGTAACAGGAGGACACAGCATTATTCTAGTGCTGTACTGTTCCGTACGGCAGCCACTACCC ACATGTAACTTTTTAAGATTTAAATTTAAATTAGTTAACATTCAAAACGCAGCTCCCCAATCACACTAGCAACATTTCAAGTGCTTGAGA GCCATGCATGATTAGTGGTTACCCTATTGAATAGGTCAGAAGTAGAATCTTTTCATCATCACAGAAAGTTCTATTGGACAGTGCTCTTCT AGATCATCATAAGACTACAGAGCACTTTTCAAAGCTCATGCATGTTCATCATGTTAGTGTCGTATTTTGAGCTGGGGTTTTGAGACTCCC CTTAGAGATAGAGAAACAGACCCAAGAAATGTGCTCAATTGCAATGGGCCACATACCTAGATCTCCAGATGTCATTTCCCCTCTCTTATT TTAAGTTATGTTAAGATTACTAAAACAATAAAAGCTCCTAAAAAATCAAACTGTATTCTGGTGTTCTCTTCTACACAGTGGGAGGGCGAG CAGTAGGAGAGATTGGCCCATTTGGTGCTGGCCATTTGAGGAATGCAAGCCCAGCACTAGTCTCATAATCTCTAGGAATCTGTAGAGAGA GGAATTGAAGTAAATTTCAGCATTGGCTCATTCAGTCATTCGGCGACATTCATCAGGTACCTGCAATGTGTTAGGGGATCTTATGAGTAG GCAGCGTGCGTGATCCTTGCTCCCCTGGAGCTTTCTAACATTCTAGCAGGCAGACCACACATAAATTTGCAATACTGTTTCTGATAAAAA >In-frame_ENST00000556147_ENST00000231061_TCGA-HT-7680-01A_NDRG2_chr14_21486922_-_SPARC_chr5_151049345_length(amino acids)=474AA_start in transcript=911_stop in transcript=2335 MHPANRSPATMAELQEVQITEEKPLLPGQTPEAAKEAELAARILLDQGQTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQ PLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLIN IDPNAKGWMDWAAHKLTGLTSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDITLRCPVMLV VGDQAPHEDAVVCSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDEDNNLLT EKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDK -------------------------------------------------------------- >In-frame_ENST00000554143_ENST00000231061_TCGA-HT-7680-01A_NDRG2_chr14_21486922_-_SPARC_chr5_151049345_length(transcript)=3911nt_BP=854nt GGGTCTGCGGGAAGCCCGAGCCGGGGCGGGCCCGAGTCAAAGGCAAGTGAAGGTGGAAGCGGCCGCGGCGGCAGCAGGCCACCATGGCGG AGCTGCAGGAGGTGCAGATCACAGAGGAGAAGCCACTGTTGCCAGGACAGACGCCTGAGGCGGCCAAGACTCACTCTGTGGAGACACCAT ACGGCTCTGTCACTTTCACTGTCTATGGCACCCCCAAACCCAAACGCCCAGCGATCCTTACCTACCACGATGTGGGACTCAACTATAAAT CTTGCTTCCAGCCACTGTTTCAGTTCGAGGACATGCAGGAAATCATTCAGAACTTTGTGCGGGTTCATGTGGATGCCCCTGGAATGGAAG AGGGAGCCCCTGTGTTCCCTTTGGGATATCAGTACCCATCTCTGGACCAGCTTGCAGACATGATCCCTTGCGTCCTGCAGTACCTAAATT TCTCTACAATAATTGGAGTTGGTGTTGGAGCTGGAGCCTACATCCTGGCGAGATATGCTCTTAACCACCCGGACACTGTTGAAGGTCTTG TCCTCATCAACATTGATCCCAATGCCAAGGGTTGGATGGATTGGGCAGCCCACAAGCTAACAGGCCTCACCTCTTCCATTCCGGAGATGA TCCTTGGACATCTTTTCAGCCAGGAAGAGCTCTCTGGAAATTCTGAGTTGATACAAAAGTACAGAAATATCATTACACATGCACCCAACC TGGATAACATTGAATTGTACTGGAACAGCTACAACAACCGCCGAGACCTGAACTTTGAGCGTGGAGGTGATATCACCCTCAGGTGTCCTG TGATGCTGGTGGTAGGAGACCAAGCACCTCATGAAGATGCAGTGGTGTGCAGCAATGACAACAAGACCTTCGACTCTTCCTGCCACTTCT TTGCCACAAAGTGCACCCTGGAGGGCACCAAGAAGGGCCACAAGCTCCACCTGGACTACATCGGGCCTTGCAAATACATCCCCCCTTGCC TGGACTCTGAGCTGACCGAATTCCCCCTGCGCATGCGGGACTGGCTCAAGAACGTCCTGGTCACCCTGTATGAGAGGGATGAGGACAACA ACCTTCTGACTGAGAAGCAGAAGCTGCGGGTGAAGAAGATCCATGAGAATGAGAAGCGCCTGGAGGCAGGAGACCACCCCGTGGAGCTGC TGGCCCGGGACTTCGAGAAGAACTATAACATGTACATCTTCCCTGTACACTGGCAGTTCGGCCAGCTGGACCAGCACCCCATTGACGGGT ACCTCTCCCACACCGAGCTGGCTCCACTGCGTGCTCCCCTCATCCCCATGGAGCATTGCACCACCCGCTTTTTCGAGACCTGTGACCTGG ACAATGACAAGTACATCGCCCTGGATGAGTGGGCCGGCTGCTTCGGCATCAAGCAGAAGGATATCGACAAGGATCTTGTGATCTAAATCC ACTCCTTCCACAGTACCGGATTCTCTCTTTAACCCTCCCCTTCGTGTTTCCCCCAATGTTTAAAATGTTTGGATGGTTTGTTGTTCTGCC TGGAGACAAGGTGCTAACATAGATTTAAGTGAATACATTAACGGTGCTAAAAATGAAAATTCTAACCCAAGACATGACATTCTTAGCTGT AACTTAACTATTAAGGCCTTTTCCACACGCATTAATAGTCCCATTTTTCTCTTGCCATTTGTAGCTTTGCCCATTGTCTTATTGGCACAT GGGTGGACACGGATCTGCTGGGCTCTGCCTTAAACACACATTGCAGCTTCAACTTTTCTCTTTAGTGTTCTGTTTGAAACTAATACTTAC CGAGTCAGACTTTGTGTTCATTTCATTTCAGGGTCTTGGCTGCCTGTGGGCTTCCCCAGGTGGCCTGGAGGTGGGCAAAGGGAAGTAACA GACACACGATGTTGTCAAGGATGGTTTTGGGACTAGAGGCTCAGTGGTGGGAGAGATCCCTGCAGAACCCACCAACCAGAACGTGGTTTG CCTGAGGCTGTAACTGAGAGAAAGATTCTGGGGCTGTGTTATGAAAATATAGACATTCTCACATAAGCCCAGTTCATCACCATTTCCTCC TTTACCTTTCAGTGCAGTTTCTTTTCACATTAGGCTGTTGGTTCAAACTTTTGGGAGCACGGACTGTCAGTTCTCTGGGAAGTGGTCAGC GCATCCTGCAGGGCTTCTCCTCCTCTGTCTTTTGGAGAACCAGGGCTCTTCTCAGGGGCTCTAGGGACTGCCAGGCTGTTTCAGCCAGGA AGGCCAAAATCAAGAGTGAGATGTAGAAAGTTGTAAAATAGAAAAAGTGGAGTTGGTGAATCGGTTGTTCTTTCCTCACATTTGGATGAT TGTCATAAGGTTTTTAGCATGTTCCTCCTTTTCTTCACCCTCCCCTTTTTTCTTCTATTAATCAAGAGAAACTTCAAAGTTAATGGGATG GTCGGATCTCACAGGCTGAGAACTCGTTCACCTCCAAGCATTTCATGAAAAAGCTGCTTCTTATTAATCATACAAACTCTCACCATGATG TGAAGAGTTTCACAAATCCTTCAAAATAAAAAGTAATGACTTAGAAACTGCCTTCCTGGGTGATTTGCATGTGTCTTAGTCTTAGTCACC TTATTATCCTGACACAAAAACACATGAGCATACATGTCTACACATGACTACACAAATGCAAACCTTTGCAAACACATTATGCTTTTGCAC ACACACACCTGTACACACACACCGGCATGTTTATACACAGGGAGTGTATGGTTCCTGTAAGCACTAAGTTAGCTGTTTTCATTTAATGAC CTGTGGTTTAACCCTTTTGATCACTACCACCATTATCAGCACCAGACTGAGCAGCTATATCCTTTTATTAATCATGGTCATTCATTCATT CATTCATTCACAAAATATTTATGATGTATTTACTCTGCACCAGGTCCCATGCCAAGCACTGGGGACACAGTTATGGCAAAGTAGACAAAG CATTTGTTCATTTGGAGCTTAGAGTCCAGGAGGAATACATTAGATAATGACACAATCAAATATAAATTGCAAGATGTCACAGGTGTGATG AAGGGAGAGTAGGAGAGACCATGAGTATGTGTAACAGGAGGACACAGCATTATTCTAGTGCTGTACTGTTCCGTACGGCAGCCACTACCC ACATGTAACTTTTTAAGATTTAAATTTAAATTAGTTAACATTCAAAACGCAGCTCCCCAATCACACTAGCAACATTTCAAGTGCTTGAGA GCCATGCATGATTAGTGGTTACCCTATTGAATAGGTCAGAAGTAGAATCTTTTCATCATCACAGAAAGTTCTATTGGACAGTGCTCTTCT AGATCATCATAAGACTACAGAGCACTTTTCAAAGCTCATGCATGTTCATCATGTTAGTGTCGTATTTTGAGCTGGGGTTTTGAGACTCCC CTTAGAGATAGAGAAACAGACCCAAGAAATGTGCTCAATTGCAATGGGCCACATACCTAGATCTCCAGATGTCATTTCCCCTCTCTTATT TTAAGTTATGTTAAGATTACTAAAACAATAAAAGCTCCTAAAAAATCAAACTGTATTCTGGTGTTCTCTTCTACACAGTGGGAGGGCGAG CAGTAGGAGAGATTGGCCCATTTGGTGCTGGCCATTTGAGGAATGCAAGCCCAGCACTAGTCTCATAATCTCTAGGAATCTGTAGAGAGA GGAATTGAAGTAAATTTCAGCATTGGCTCATTCAGTCATTCGGCGACATTCATCAGGTACCTGCAATGTGTTAGGGGATCTTATGAGTAG GCAGCGTGCGTGATCCTTGCTCCCCTGGAGCTTTCTAACATTCTAGCAGGCAGACCACACATAAATTTGCAATACTGTTTCTGATAAAAA >In-frame_ENST00000554143_ENST00000231061_TCGA-HT-7680-01A_NDRG2_chr14_21486922_-_SPARC_chr5_151049345_length(amino acids)=450AA_start in transcript=83_stop in transcript=1435 MAELQEVQITEEKPLLPGQTPEAAKTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPG MEEGAPVFPLGYQYPSLDQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIP EMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDITLRCPVMLVVGDQAPHEDAVVCSNDNKTFDSSC HFFATKCTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDEDNNLLTEKQKLRVKKIHENEKRLEAGDHPV ELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQKDIDKDLVI -------------------------------------------------------------- >In-frame_ENST00000397851_ENST00000231061_TCGA-HT-7680-01A_NDRG2_chr14_21486922_-_SPARC_chr5_151049345_length(transcript)=3953nt_BP=896nt GGGTCTGCGGGAAGCCCGAGCCGGGGCGGGCCCGAGTCAAAGGCAAGTGAAGGTGGAAGCGGCCGCGGCGGCAGCAGGCCACCATGGCGG AGCTGCAGGAGGTGCAGATCACAGAGGAGAAGCCACTGTTGCCAGGACAGACGCCTGAGGCGGCCAAGGAGGCTGAGTTAGCTGCCCGAA TCCTCCTGGACCAGGGACAGACTCACTCTGTGGAGACACCATACGGCTCTGTCACTTTCACTGTCTATGGCACCCCCAAACCCAAACGCC CAGCGATCCTTACCTACCACGATGTGGGACTCAACTATAAATCTTGCTTCCAGCCACTGTTTCAGTTCGAGGACATGCAGGAAATCATTC AGAACTTTGTGCGGGTTCATGTGGATGCCCCTGGAATGGAAGAGGGAGCCCCTGTGTTCCCTTTGGGATATCAGTACCCATCTCTGGACC AGCTTGCAGACATGATCCCTTGCGTCCTGCAGTACCTAAATTTCTCTACAATAATTGGAGTTGGTGTTGGAGCTGGAGCCTACATCCTGG CGAGATATGCTCTTAACCACCCGGACACTGTTGAAGGTCTTGTCCTCATCAACATTGATCCCAATGCCAAGGGTTGGATGGATTGGGCAG CCCACAAGCTAACAGGCCTCACCTCTTCCATTCCGGAGATGATCCTTGGACATCTTTTCAGCCAGGAAGAGCTCTCTGGAAATTCTGAGT TGATACAAAAGTACAGAAATATCATTACACATGCACCCAACCTGGATAACATTGAATTGTACTGGAACAGCTACAACAACCGCCGAGACC TGAACTTTGAGCGTGGAGGTGATATCACCCTCAGGTGTCCTGTGATGCTGGTGGTAGGAGACCAAGCACCTCATGAAGATGCAGTGGTGT GCAGCAATGACAACAAGACCTTCGACTCTTCCTGCCACTTCTTTGCCACAAAGTGCACCCTGGAGGGCACCAAGAAGGGCCACAAGCTCC ACCTGGACTACATCGGGCCTTGCAAATACATCCCCCCTTGCCTGGACTCTGAGCTGACCGAATTCCCCCTGCGCATGCGGGACTGGCTCA AGAACGTCCTGGTCACCCTGTATGAGAGGGATGAGGACAACAACCTTCTGACTGAGAAGCAGAAGCTGCGGGTGAAGAAGATCCATGAGA ATGAGAAGCGCCTGGAGGCAGGAGACCACCCCGTGGAGCTGCTGGCCCGGGACTTCGAGAAGAACTATAACATGTACATCTTCCCTGTAC ACTGGCAGTTCGGCCAGCTGGACCAGCACCCCATTGACGGGTACCTCTCCCACACCGAGCTGGCTCCACTGCGTGCTCCCCTCATCCCCA TGGAGCATTGCACCACCCGCTTTTTCGAGACCTGTGACCTGGACAATGACAAGTACATCGCCCTGGATGAGTGGGCCGGCTGCTTCGGCA TCAAGCAGAAGGATATCGACAAGGATCTTGTGATCTAAATCCACTCCTTCCACAGTACCGGATTCTCTCTTTAACCCTCCCCTTCGTGTT TCCCCCAATGTTTAAAATGTTTGGATGGTTTGTTGTTCTGCCTGGAGACAAGGTGCTAACATAGATTTAAGTGAATACATTAACGGTGCT AAAAATGAAAATTCTAACCCAAGACATGACATTCTTAGCTGTAACTTAACTATTAAGGCCTTTTCCACACGCATTAATAGTCCCATTTTT CTCTTGCCATTTGTAGCTTTGCCCATTGTCTTATTGGCACATGGGTGGACACGGATCTGCTGGGCTCTGCCTTAAACACACATTGCAGCT TCAACTTTTCTCTTTAGTGTTCTGTTTGAAACTAATACTTACCGAGTCAGACTTTGTGTTCATTTCATTTCAGGGTCTTGGCTGCCTGTG GGCTTCCCCAGGTGGCCTGGAGGTGGGCAAAGGGAAGTAACAGACACACGATGTTGTCAAGGATGGTTTTGGGACTAGAGGCTCAGTGGT GGGAGAGATCCCTGCAGAACCCACCAACCAGAACGTGGTTTGCCTGAGGCTGTAACTGAGAGAAAGATTCTGGGGCTGTGTTATGAAAAT ATAGACATTCTCACATAAGCCCAGTTCATCACCATTTCCTCCTTTACCTTTCAGTGCAGTTTCTTTTCACATTAGGCTGTTGGTTCAAAC TTTTGGGAGCACGGACTGTCAGTTCTCTGGGAAGTGGTCAGCGCATCCTGCAGGGCTTCTCCTCCTCTGTCTTTTGGAGAACCAGGGCTC TTCTCAGGGGCTCTAGGGACTGCCAGGCTGTTTCAGCCAGGAAGGCCAAAATCAAGAGTGAGATGTAGAAAGTTGTAAAATAGAAAAAGT GGAGTTGGTGAATCGGTTGTTCTTTCCTCACATTTGGATGATTGTCATAAGGTTTTTAGCATGTTCCTCCTTTTCTTCACCCTCCCCTTT TTTCTTCTATTAATCAAGAGAAACTTCAAAGTTAATGGGATGGTCGGATCTCACAGGCTGAGAACTCGTTCACCTCCAAGCATTTCATGA AAAAGCTGCTTCTTATTAATCATACAAACTCTCACCATGATGTGAAGAGTTTCACAAATCCTTCAAAATAAAAAGTAATGACTTAGAAAC TGCCTTCCTGGGTGATTTGCATGTGTCTTAGTCTTAGTCACCTTATTATCCTGACACAAAAACACATGAGCATACATGTCTACACATGAC TACACAAATGCAAACCTTTGCAAACACATTATGCTTTTGCACACACACACCTGTACACACACACCGGCATGTTTATACACAGGGAGTGTA TGGTTCCTGTAAGCACTAAGTTAGCTGTTTTCATTTAATGACCTGTGGTTTAACCCTTTTGATCACTACCACCATTATCAGCACCAGACT GAGCAGCTATATCCTTTTATTAATCATGGTCATTCATTCATTCATTCATTCACAAAATATTTATGATGTATTTACTCTGCACCAGGTCCC ATGCCAAGCACTGGGGACACAGTTATGGCAAAGTAGACAAAGCATTTGTTCATTTGGAGCTTAGAGTCCAGGAGGAATACATTAGATAAT GACACAATCAAATATAAATTGCAAGATGTCACAGGTGTGATGAAGGGAGAGTAGGAGAGACCATGAGTATGTGTAACAGGAGGACACAGC ATTATTCTAGTGCTGTACTGTTCCGTACGGCAGCCACTACCCACATGTAACTTTTTAAGATTTAAATTTAAATTAGTTAACATTCAAAAC GCAGCTCCCCAATCACACTAGCAACATTTCAAGTGCTTGAGAGCCATGCATGATTAGTGGTTACCCTATTGAATAGGTCAGAAGTAGAAT CTTTTCATCATCACAGAAAGTTCTATTGGACAGTGCTCTTCTAGATCATCATAAGACTACAGAGCACTTTTCAAAGCTCATGCATGTTCA TCATGTTAGTGTCGTATTTTGAGCTGGGGTTTTGAGACTCCCCTTAGAGATAGAGAAACAGACCCAAGAAATGTGCTCAATTGCAATGGG CCACATACCTAGATCTCCAGATGTCATTTCCCCTCTCTTATTTTAAGTTATGTTAAGATTACTAAAACAATAAAAGCTCCTAAAAAATCA AACTGTATTCTGGTGTTCTCTTCTACACAGTGGGAGGGCGAGCAGTAGGAGAGATTGGCCCATTTGGTGCTGGCCATTTGAGGAATGCAA GCCCAGCACTAGTCTCATAATCTCTAGGAATCTGTAGAGAGAGGAATTGAAGTAAATTTCAGCATTGGCTCATTCAGTCATTCGGCGACA TTCATCAGGTACCTGCAATGTGTTAGGGGATCTTATGAGTAGGCAGCGTGCGTGATCCTTGCTCCCCTGGAGCTTTCTAACATTCTAGCA >In-frame_ENST00000397851_ENST00000231061_TCGA-HT-7680-01A_NDRG2_chr14_21486922_-_SPARC_chr5_151049345_length(amino acids)=464AA_start in transcript=83_stop in transcript=1477 MAELQEVQITEEKPLLPGQTPEAAKEAELAARILLDQGQTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQPLFQFEDMQE IIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMD WAAHKLTGLTSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDITLRCPVMLVVGDQAPHEDA VVCSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDEDNNLLTEKQKLRVKKI HENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGC -------------------------------------------------------------- >In-frame_ENST00000298684_ENST00000231061_TCGA-HT-7680-01A_NDRG2_chr14_21486922_-_SPARC_chr5_151049345_length(transcript)=3753nt_BP=696nt TGCCAGGCCACCATGGCGGAGCTGCAGGAGGTGCAGATCACAGAGGAGAAGCCACTGTTGCCAGGACAGACGCCTGAGGCGGCCAAGACT CACTCTGTGGAGACACCATACGGCTCTGTCACTTTCACTGTCTATGGCACCCCCAAACCCAAACGCCCAGCGATCCTTACCTACCACGAT GTGGGACTCAACTATAAATCTTGCTTCCAGCCACTGTTTCAGTTCGAGGACATGCAGGAAATCATTCAGAACTTTGTGCGGGTTCATGTG GATGCCCCTGGAATGGAAGAGGGAGCCCCTGTGTTCCCTTTGGGATATCAGTACCCATCTCTGGACCAGCTTGCAGACATGATCCCTTGC GTCCTGCAGTACCTAAATTTCTCTACAATAATTGGAGTTGGTGTTGGAGCTGGAGCCTACATCCTGGCGAGATATGCTCTAACAGGCCTC ACCTCTTCCATTCCGGAGATGATCCTTGGACATCTTTTCAGCCAGGAAGAGCTCTCTGGAAATTCTGAGTTGATACAAAAGTACAGAAAT ATCATTACACATGCACCCAACCTGGATAACATTGAATTGTACTGGAACAGCTACAACAACCGCCGAGACCTGAACTTTGAGCGTGGAGGT GATATCACCCTCAGGTGTCCTGTGATGCTGGTGGTAGGAGACCAAGCACCTCATGAAGATGCAGTGGTGTGCAGCAATGACAACAAGACC TTCGACTCTTCCTGCCACTTCTTTGCCACAAAGTGCACCCTGGAGGGCACCAAGAAGGGCCACAAGCTCCACCTGGACTACATCGGGCCT TGCAAATACATCCCCCCTTGCCTGGACTCTGAGCTGACCGAATTCCCCCTGCGCATGCGGGACTGGCTCAAGAACGTCCTGGTCACCCTG TATGAGAGGGATGAGGACAACAACCTTCTGACTGAGAAGCAGAAGCTGCGGGTGAAGAAGATCCATGAGAATGAGAAGCGCCTGGAGGCA GGAGACCACCCCGTGGAGCTGCTGGCCCGGGACTTCGAGAAGAACTATAACATGTACATCTTCCCTGTACACTGGCAGTTCGGCCAGCTG GACCAGCACCCCATTGACGGGTACCTCTCCCACACCGAGCTGGCTCCACTGCGTGCTCCCCTCATCCCCATGGAGCATTGCACCACCCGC TTTTTCGAGACCTGTGACCTGGACAATGACAAGTACATCGCCCTGGATGAGTGGGCCGGCTGCTTCGGCATCAAGCAGAAGGATATCGAC AAGGATCTTGTGATCTAAATCCACTCCTTCCACAGTACCGGATTCTCTCTTTAACCCTCCCCTTCGTGTTTCCCCCAATGTTTAAAATGT TTGGATGGTTTGTTGTTCTGCCTGGAGACAAGGTGCTAACATAGATTTAAGTGAATACATTAACGGTGCTAAAAATGAAAATTCTAACCC AAGACATGACATTCTTAGCTGTAACTTAACTATTAAGGCCTTTTCCACACGCATTAATAGTCCCATTTTTCTCTTGCCATTTGTAGCTTT GCCCATTGTCTTATTGGCACATGGGTGGACACGGATCTGCTGGGCTCTGCCTTAAACACACATTGCAGCTTCAACTTTTCTCTTTAGTGT TCTGTTTGAAACTAATACTTACCGAGTCAGACTTTGTGTTCATTTCATTTCAGGGTCTTGGCTGCCTGTGGGCTTCCCCAGGTGGCCTGG AGGTGGGCAAAGGGAAGTAACAGACACACGATGTTGTCAAGGATGGTTTTGGGACTAGAGGCTCAGTGGTGGGAGAGATCCCTGCAGAAC CCACCAACCAGAACGTGGTTTGCCTGAGGCTGTAACTGAGAGAAAGATTCTGGGGCTGTGTTATGAAAATATAGACATTCTCACATAAGC CCAGTTCATCACCATTTCCTCCTTTACCTTTCAGTGCAGTTTCTTTTCACATTAGGCTGTTGGTTCAAACTTTTGGGAGCACGGACTGTC AGTTCTCTGGGAAGTGGTCAGCGCATCCTGCAGGGCTTCTCCTCCTCTGTCTTTTGGAGAACCAGGGCTCTTCTCAGGGGCTCTAGGGAC TGCCAGGCTGTTTCAGCCAGGAAGGCCAAAATCAAGAGTGAGATGTAGAAAGTTGTAAAATAGAAAAAGTGGAGTTGGTGAATCGGTTGT TCTTTCCTCACATTTGGATGATTGTCATAAGGTTTTTAGCATGTTCCTCCTTTTCTTCACCCTCCCCTTTTTTCTTCTATTAATCAAGAG AAACTTCAAAGTTAATGGGATGGTCGGATCTCACAGGCTGAGAACTCGTTCACCTCCAAGCATTTCATGAAAAAGCTGCTTCTTATTAAT CATACAAACTCTCACCATGATGTGAAGAGTTTCACAAATCCTTCAAAATAAAAAGTAATGACTTAGAAACTGCCTTCCTGGGTGATTTGC ATGTGTCTTAGTCTTAGTCACCTTATTATCCTGACACAAAAACACATGAGCATACATGTCTACACATGACTACACAAATGCAAACCTTTG CAAACACATTATGCTTTTGCACACACACACCTGTACACACACACCGGCATGTTTATACACAGGGAGTGTATGGTTCCTGTAAGCACTAAG TTAGCTGTTTTCATTTAATGACCTGTGGTTTAACCCTTTTGATCACTACCACCATTATCAGCACCAGACTGAGCAGCTATATCCTTTTAT TAATCATGGTCATTCATTCATTCATTCATTCACAAAATATTTATGATGTATTTACTCTGCACCAGGTCCCATGCCAAGCACTGGGGACAC AGTTATGGCAAAGTAGACAAAGCATTTGTTCATTTGGAGCTTAGAGTCCAGGAGGAATACATTAGATAATGACACAATCAAATATAAATT GCAAGATGTCACAGGTGTGATGAAGGGAGAGTAGGAGAGACCATGAGTATGTGTAACAGGAGGACACAGCATTATTCTAGTGCTGTACTG TTCCGTACGGCAGCCACTACCCACATGTAACTTTTTAAGATTTAAATTTAAATTAGTTAACATTCAAAACGCAGCTCCCCAATCACACTA GCAACATTTCAAGTGCTTGAGAGCCATGCATGATTAGTGGTTACCCTATTGAATAGGTCAGAAGTAGAATCTTTTCATCATCACAGAAAG TTCTATTGGACAGTGCTCTTCTAGATCATCATAAGACTACAGAGCACTTTTCAAAGCTCATGCATGTTCATCATGTTAGTGTCGTATTTT GAGCTGGGGTTTTGAGACTCCCCTTAGAGATAGAGAAACAGACCCAAGAAATGTGCTCAATTGCAATGGGCCACATACCTAGATCTCCAG ATGTCATTTCCCCTCTCTTATTTTAAGTTATGTTAAGATTACTAAAACAATAAAAGCTCCTAAAAAATCAAACTGTATTCTGGTGTTCTC TTCTACACAGTGGGAGGGCGAGCAGTAGGAGAGATTGGCCCATTTGGTGCTGGCCATTTGAGGAATGCAAGCCCAGCACTAGTCTCATAA TCTCTAGGAATCTGTAGAGAGAGGAATTGAAGTAAATTTCAGCATTGGCTCATTCAGTCATTCGGCGACATTCATCAGGTACCTGCAATG TGTTAGGGGATCTTATGAGTAGGCAGCGTGCGTGATCCTTGCTCCCCTGGAGCTTTCTAACATTCTAGCAGGCAGACCACACATAAATTT >In-frame_ENST00000298684_ENST00000231061_TCGA-HT-7680-01A_NDRG2_chr14_21486922_-_SPARC_chr5_151049345_length(amino acids)=421AA_start in transcript=12_stop in transcript=1277 MAELQEVQITEEKPLLPGQTPEAAKTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPG MEEGAPVFPLGYQYPSLDQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALTGLTSSIPEMILGHLFSQEELSGNSELIQKYRNIITH APNLDNIELYWNSYNNRRDLNFERGGDITLRCPVMLVVGDQAPHEDAVVCSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPCKYI PPCLDSELTEFPLRMRDWLKNVLVTLYERDEDNNLLTEKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHP -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for NDRG2-SPARC |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for NDRG2-SPARC |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for NDRG2-SPARC |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | NDRG2 | C0007102 | Malignant tumor of colon | 1 | CTD_human |
Hgene | NDRG2 | C0007787 | Transient Ischemic Attack | 1 | CTD_human |
Hgene | NDRG2 | C0009375 | Colonic Neoplasms | 1 | CTD_human |
Hgene | NDRG2 | C0023893 | Liver Cirrhosis, Experimental | 1 | CTD_human |
Hgene | NDRG2 | C0086543 | Cataract | 1 | CTD_human |
Hgene | NDRG2 | C0472381 | Posterior Circulation Transient Ischemic Attack | 1 | CTD_human |
Hgene | NDRG2 | C0524524 | Pseudoaphakia | 1 | CTD_human |
Hgene | NDRG2 | C0751019 | Carotid Circulation Transient Ischemic Attack | 1 | CTD_human |
Hgene | NDRG2 | C0751020 | Transient Ischemic Attack, Vertebrobasilar Circulation | 1 | CTD_human |
Hgene | NDRG2 | C0751021 | Crescendo Transient Ischemic Attacks | 1 | CTD_human |
Hgene | NDRG2 | C0751022 | Brain Stem Ischemia, Transient | 1 | CTD_human |
Hgene | NDRG2 | C0917805 | Transient Cerebral Ischemia | 1 | CTD_human |
Hgene | NDRG2 | C1510497 | Lens Opacities | 1 | CTD_human |
Hgene | NDRG2 | C1527335 | Transient Ischemic Attack, Anterior Circulation | 1 | CTD_human |
Tgene | SPARC | C0023893 | Liver Cirrhosis, Experimental | 2 | CTD_human |
Tgene | SPARC | C0029434 | Osteogenesis Imperfecta | 2 | CTD_human;GENOMICS_ENGLAND |
Tgene | SPARC | C0007102 | Malignant tumor of colon | 1 | CTD_human |
Tgene | SPARC | C0009375 | Colonic Neoplasms | 1 | CTD_human |
Tgene | SPARC | C0009402 | Colorectal Carcinoma | 1 | CTD_human |
Tgene | SPARC | C0009404 | Colorectal Neoplasms | 1 | CTD_human |
Tgene | SPARC | C0019158 | Hepatitis | 1 | CTD_human |
Tgene | SPARC | C0020429 | Hyperalgesia | 1 | CTD_human |
Tgene | SPARC | C0022658 | Kidney Diseases | 1 | CTD_human |
Tgene | SPARC | C0023467 | Leukemia, Myelocytic, Acute | 1 | CTD_human |
Tgene | SPARC | C0023890 | Liver Cirrhosis | 1 | CTD_human |
Tgene | SPARC | C0023931 | Lobstein Disease | 1 | CTD_human |
Tgene | SPARC | C0024031 | Low Back Pain | 1 | CTD_human |
Tgene | SPARC | C0026764 | Multiple Myeloma | 1 | CTD_human |
Tgene | SPARC | C0026998 | Acute Myeloid Leukemia, M1 | 1 | CTD_human |
Tgene | SPARC | C0027540 | Necrosis | 1 | CTD_human |
Tgene | SPARC | C0027659 | Neoplasms, Experimental | 1 | CTD_human |
Tgene | SPARC | C0040034 | Thrombocytopenia | 1 | CTD_human |
Tgene | SPARC | C0041948 | Uremia | 1 | CTD_human |
Tgene | SPARC | C0043094 | Weight Gain | 1 | CTD_human |
Tgene | SPARC | C0151744 | Myocardial Ischemia | 1 | CTD_human |
Tgene | SPARC | C0158266 | Intervertebral Disc Degeneration | 1 | CTD_human |
Tgene | SPARC | C0206686 | Adrenocortical carcinoma | 1 | CTD_human |
Tgene | SPARC | C0239946 | Fibrosis, Liver | 1 | CTD_human |
Tgene | SPARC | C0268363 | Osteogenesis imperfecta type IV (disorder) | 1 | ORPHANET |
Tgene | SPARC | C0423682 | Low Back Pain, Mechanical | 1 | CTD_human |
Tgene | SPARC | C0423689 | Low Back Pain, Posterior Compartment | 1 | CTD_human |
Tgene | SPARC | C0458247 | Allodynia | 1 | CTD_human |
Tgene | SPARC | C0577660 | Low Back Pain, Postural | 1 | CTD_human |
Tgene | SPARC | C0751211 | Hyperalgesia, Primary | 1 | CTD_human |
Tgene | SPARC | C0751212 | Hyperalgesia, Secondary | 1 | CTD_human |
Tgene | SPARC | C0751213 | Tactile Allodynia | 1 | CTD_human |
Tgene | SPARC | C0751214 | Hyperalgesia, Thermal | 1 | CTD_human |
Tgene | SPARC | C0751648 | Recurrent Low Back Pain | 1 | CTD_human |
Tgene | SPARC | C0919267 | ovarian neoplasm | 1 | CTD_human |
Tgene | SPARC | C1140680 | Malignant neoplasm of ovary | 1 | CTD_human |
Tgene | SPARC | C1879321 | Acute Myeloid Leukemia (AML-M2) | 1 | CTD_human |
Tgene | SPARC | C2717759 | Degenerative Intervertebral Discs | 1 | CTD_human |
Tgene | SPARC | C2936719 | Mechanical Allodynia | 1 | CTD_human |
Tgene | SPARC | C4225301 | OSTEOGENESIS IMPERFECTA, TYPE XVII | 1 | CTD_human;GENOMICS_ENGLAND;UNIPROT |