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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:NPEPPS-ARL17B (FusionGDB2 ID:59514) |
Fusion Gene Summary for NPEPPS-ARL17B |
Fusion gene summary |
Fusion gene information | Fusion gene name: NPEPPS-ARL17B | Fusion gene ID: 59514 | Hgene | Tgene | Gene symbol | NPEPPS | ARL17B | Gene ID | 9520 | 100506084 |
Gene name | aminopeptidase puromycin sensitive | ADP ribosylation factor like GTPase 17B | |
Synonyms | AAP-S|MP100|PSA | ARL17|ARL17A | |
Cytomap | 17q21.32 | 17q21.31 | |
Type of gene | protein-coding | protein-coding | |
Description | puromycin-sensitive aminopeptidasecytosol alanyl aminopeptidasemetalloproteinase MP100 | ADP-ribosylation factor-like protein 17ADP-ribosylation factor 7ADP-ribosylation factor-like 17B | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | P55786 | . | |
Ensembl transtripts involved in fusion gene | ENST00000525037, ENST00000530173, ENST00000322157, ENST00000544660, | ENST00000570618, ENST00000434041, ENST00000575698, ENST00000575960, ENST00000571246, ENST00000450673, | |
Fusion gene scores | * DoF score | 18 X 9 X 9=1458 | 7 X 7 X 4=196 |
# samples | 19 | 8 | |
** MAII score | log2(19/1458*10)=-2.93991939599599 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(8/196*10)=-1.29278174922785 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: NPEPPS [Title/Abstract] AND ARL17B [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | NPEPPS(45677105)-ARL17B(44377031), # samples:1 NPEPPS(45677105)-ARL17B(44388641), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | NPEPPS | GO:0071456 | cellular response to hypoxia | 21056661 |
Fusion gene breakpoints across NPEPPS (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across ARL17B (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | BRCA | TCGA-A2-A0CX-01A | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - |
ChimerDB4 | BRCA | TCGA-A2-A0CX-01A | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44388641 | - |
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Fusion Gene ORF analysis for NPEPPS-ARL17B |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-3CDS | ENST00000525037 | ENST00000570618 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - |
intron-3CDS | ENST00000525037 | ENST00000434041 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - |
intron-intron | ENST00000525037 | ENST00000575698 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - |
intron-intron | ENST00000525037 | ENST00000575960 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - |
intron-intron | ENST00000525037 | ENST00000571246 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - |
intron-intron | ENST00000525037 | ENST00000450673 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - |
In-frame | ENST00000530173 | ENST00000570618 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - |
In-frame | ENST00000530173 | ENST00000434041 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - |
5CDS-intron | ENST00000530173 | ENST00000575698 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - |
5CDS-intron | ENST00000530173 | ENST00000575960 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - |
5CDS-intron | ENST00000530173 | ENST00000571246 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - |
5CDS-intron | ENST00000530173 | ENST00000450673 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - |
In-frame | ENST00000322157 | ENST00000570618 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - |
In-frame | ENST00000322157 | ENST00000434041 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - |
5CDS-intron | ENST00000322157 | ENST00000575698 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - |
5CDS-intron | ENST00000322157 | ENST00000575960 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - |
5CDS-intron | ENST00000322157 | ENST00000571246 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - |
5CDS-intron | ENST00000322157 | ENST00000450673 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - |
In-frame | ENST00000544660 | ENST00000570618 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - |
In-frame | ENST00000544660 | ENST00000434041 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - |
5CDS-intron | ENST00000544660 | ENST00000575698 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - |
5CDS-intron | ENST00000544660 | ENST00000575960 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - |
5CDS-intron | ENST00000544660 | ENST00000571246 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - |
5CDS-intron | ENST00000544660 | ENST00000450673 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - |
intron-intron | ENST00000525037 | ENST00000570618 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44388641 | - |
intron-intron | ENST00000525037 | ENST00000434041 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44388641 | - |
intron-intron | ENST00000525037 | ENST00000575698 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44388641 | - |
intron-intron | ENST00000525037 | ENST00000575960 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44388641 | - |
intron-intron | ENST00000525037 | ENST00000571246 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44388641 | - |
intron-intron | ENST00000525037 | ENST00000450673 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44388641 | - |
5CDS-intron | ENST00000530173 | ENST00000570618 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44388641 | - |
5CDS-intron | ENST00000530173 | ENST00000434041 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44388641 | - |
5CDS-intron | ENST00000530173 | ENST00000575698 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44388641 | - |
5CDS-intron | ENST00000530173 | ENST00000575960 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44388641 | - |
5CDS-intron | ENST00000530173 | ENST00000571246 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44388641 | - |
5CDS-intron | ENST00000530173 | ENST00000450673 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44388641 | - |
5CDS-intron | ENST00000322157 | ENST00000570618 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44388641 | - |
5CDS-intron | ENST00000322157 | ENST00000434041 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44388641 | - |
5CDS-intron | ENST00000322157 | ENST00000575698 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44388641 | - |
5CDS-intron | ENST00000322157 | ENST00000575960 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44388641 | - |
5CDS-intron | ENST00000322157 | ENST00000571246 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44388641 | - |
5CDS-intron | ENST00000322157 | ENST00000450673 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44388641 | - |
5CDS-intron | ENST00000544660 | ENST00000570618 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44388641 | - |
5CDS-intron | ENST00000544660 | ENST00000434041 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44388641 | - |
5CDS-intron | ENST00000544660 | ENST00000575698 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44388641 | - |
5CDS-intron | ENST00000544660 | ENST00000575960 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44388641 | - |
5CDS-intron | ENST00000544660 | ENST00000571246 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44388641 | - |
5CDS-intron | ENST00000544660 | ENST00000450673 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44388641 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000530173 | NPEPPS | chr17 | 45677105 | + | ENST00000570618 | ARL17B | chr17 | 44377031 | - | 2393 | 1618 | 30 | 1736 | 568 |
ENST00000530173 | NPEPPS | chr17 | 45677105 | + | ENST00000434041 | ARL17B | chr17 | 44377031 | - | 2070 | 1618 | 30 | 1736 | 568 |
ENST00000322157 | NPEPPS | chr17 | 45677105 | + | ENST00000570618 | ARL17B | chr17 | 44377031 | - | 2612 | 1837 | 66 | 1955 | 629 |
ENST00000322157 | NPEPPS | chr17 | 45677105 | + | ENST00000434041 | ARL17B | chr17 | 44377031 | - | 2289 | 1837 | 66 | 1955 | 629 |
ENST00000544660 | NPEPPS | chr17 | 45677105 | + | ENST00000570618 | ARL17B | chr17 | 44377031 | - | 2241 | 1466 | 13 | 1584 | 523 |
ENST00000544660 | NPEPPS | chr17 | 45677105 | + | ENST00000434041 | ARL17B | chr17 | 44377031 | - | 1918 | 1466 | 13 | 1584 | 523 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000530173 | ENST00000570618 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - | 0.000463348 | 0.99953663 |
ENST00000530173 | ENST00000434041 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - | 0.000603125 | 0.9993969 |
ENST00000322157 | ENST00000570618 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - | 0.000804323 | 0.99919564 |
ENST00000322157 | ENST00000434041 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - | 0.001019418 | 0.9989806 |
ENST00000544660 | ENST00000570618 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - | 0.000267918 | 0.9997321 |
ENST00000544660 | ENST00000434041 | NPEPPS | chr17 | 45677105 | + | ARL17B | chr17 | 44377031 | - | 0.000347427 | 0.9996526 |
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Fusion Genomic Features for NPEPPS-ARL17B |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for NPEPPS-ARL17B |
Go to FGviewer for the breakpoints of chr17:45677105-chr17:44377031 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
NPEPPS | . |
FUNCTION: Aminopeptidase with broad substrate specificity for several peptides. Involved in proteolytic events essential for cell growth and viability. May act as regulator of neuropeptide activity. Plays a role in the antigen-processing pathway for MHC class I molecules. Involved in the N-terminal trimming of cytotoxic T-cell epitope precursors. Digests the poly-Q peptides found in many cellular proteins. Digests tau from normal brain more efficiently than tau from Alzheimer disease brain. {ECO:0000269|PubMed:10978616, ECO:0000269|PubMed:11062501, ECO:0000269|PubMed:17154549, ECO:0000269|PubMed:17318184, ECO:0000269|PubMed:19917696}. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | NPEPPS | chr17:45677105 | chr17:44377031 | ENST00000322157 | + | 14 | 23 | 316_320 | 533.3333333333334 | 920.0 | Region | Substrate binding |
Tgene | ARL17B | chr17:45677105 | chr17:44377031 | ENST00000434041 | 2 | 5 | 125_128 | 86.33333333333333 | 198.33333333333334 | Nucleotide binding | GTP | |
Tgene | ARL17B | chr17:45677105 | chr17:44377031 | ENST00000450673 | 0 | 4 | 125_128 | 0 | 178.0 | Nucleotide binding | GTP | |
Tgene | ARL17B | chr17:45677105 | chr17:44377031 | ENST00000450673 | 0 | 4 | 24_31 | 0 | 178.0 | Nucleotide binding | GTP | |
Tgene | ARL17B | chr17:45677105 | chr17:44377031 | ENST00000450673 | 0 | 4 | 67_71 | 0 | 178.0 | Nucleotide binding | GTP | |
Tgene | ARL17B | chr17:45677105 | chr17:44377031 | ENST00000570618 | 2 | 5 | 125_128 | 86.33333333333333 | 299.6666666666667 | Nucleotide binding | GTP |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | NPEPPS | chr17:45677105 | chr17:44377031 | ENST00000322157 | + | 14 | 23 | 726_730 | 533.3333333333334 | 920.0 | Motif | Nuclear localization signal |
Tgene | ARL17B | chr17:45677105 | chr17:44377031 | ENST00000434041 | 2 | 5 | 24_31 | 86.33333333333333 | 198.33333333333334 | Nucleotide binding | GTP | |
Tgene | ARL17B | chr17:45677105 | chr17:44377031 | ENST00000434041 | 2 | 5 | 67_71 | 86.33333333333333 | 198.33333333333334 | Nucleotide binding | GTP | |
Tgene | ARL17B | chr17:45677105 | chr17:44377031 | ENST00000570618 | 2 | 5 | 24_31 | 86.33333333333333 | 299.6666666666667 | Nucleotide binding | GTP | |
Tgene | ARL17B | chr17:45677105 | chr17:44377031 | ENST00000570618 | 2 | 5 | 67_71 | 86.33333333333333 | 299.6666666666667 | Nucleotide binding | GTP |
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Fusion Gene Sequence for NPEPPS-ARL17B |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000530173_ENST00000570618_TCGA-A2-A0CX-01A_NPEPPS_chr17_45677105_+_ARL17B_chr17_44377031_length(transcript)=2393nt_BP=1618nt AAGTTACGGAAGAGTCAAGGCTGGGACCTCATGGCATCATTTTCCATGGATTGCTCTCCAAGTTTTTGTGTTCCTGGCCTTTGGAACCCC TTCATCATATTCCGCAGCCGCTCCTCTCGCCGCCGCCTCCACAGCCTGGGCCTCGCCGCGATGCCGGAGAAGAGGCCCTTCGAGCGGCTG CCTGCCGATGTCTCCCCCATCAACTACAGCCTTTGCCTCAAGCCCGACTTGCTGGACTTCACCTTCGAGGGCAAGCTGGAGGCCGCCGCC CAGGTGAGGCAGGCGACTAATCAGATTGTGATGAATTGTGCTGATATTGATATTATTACAGCTTCATATGCACCAGAAGGAGATGAAGAA ATACATGCTACAGGATTTAACTATCAGAATGAAGATGAAAAAGTCACCTTGTCTTTCCCTAGTACTCTGCAAACAGGTACGGGAACCTTA AAGATAGATTTTGTTGGAGAGCTGAATGACAAAATGAAAGGTTTCTATAGAAGTAAATATACTACCCCTTCTGGAGAGGTGCGCTATGCT GCTGTAACACAGTTTGAGGCTACTGATGCCCGAAGGGCTTTTCCTTGCTGGGATGAGCCTGCTATCAAAGCAACTTTTGATATCTCATTG GTTGTTCCTAAAGACAGAGTAGCTTTATCAAACATGAATGTAATTGACCGGAAACCATACCCTGATGATGAAAATTTAGTGGAAGTGAAG TTTGCCCGCACACCTGTTATGTCTACATATCTGGTGGCATTTGTTGTGGGTGAATATGACTTTGTAGAAACAAGGTCAAAAGATGGTGTG TGTGTCCGTGTTTACACTCCTGTTGGCAAAGCAGAGCAAGGAAAATTTGCGTTAGAGGTTGCTGCTAAAACCTTGCCTTTTTATAAGGAC TACTTCAATGTTCCTTATCCTCTACCTAAAATTGATCTCATTGCTATTGCAGACTTTGCAGCTGGTGCCATGGAGAACTGGGGCCTTGTT ACTTATAGGGAGACTGCATTGCTTATTGATCCAAAAAATTCCTGTTCTTCATCCCGCCAGTGGGTTGCTCTGGTTGTGGGACATGAACTC GCCCATCAATGGTTTGGAAATCTTGTTACTATGGAATGGTGGACTCATCTTTGGTTAAATGAAGGTTTTGCATCCTGGATTGAATATCTG TGTGTAGACCACTGCTTCCCAGAGTATGATATTTGGACTCAGTTTGTTTCTGCTGATTACACCCGTGCCCAGGAGCTTGACGCCTTAGAT AACAGCCATCCTATTGAAGTCAGTGTGGGCCATCCATCTGAGGTTGATGAGATATTTGATGCTATATCATATAGCAAAGGTGCATCTGTC ATCCGAATGCTGCATGACTACATTGGGGATAAGGACTTTAAGAAAGGAATGAACATGTATTTAACCAAGTTCCAACAAAAGAATGCTGCC ACAGAGGATCTCTGGGAAAGTTTAGAAAATGCTAGTGGTAAACCTATAGCAGCTGTGATGAATACCTGGACCAAACAAATGGGATTTCCC CTCATTTATGTGGAAGCTGAACAGGTAGAAGATGACAGATTATTGAGGTTGTCCCAAAAGAAGTTCTGTGCTGGTGGGTCATATGTTGAG CTATCAGCTTCCCAGTTTGCACAATTCATCAAGAAATTATGCGGGGTCACTGGCACAAATGATGAGGCATCTCCTGGAAGCTTAACTTCT TATCCATCCCATCTCTTGGACAGATGATGCCAGTTAATTACTTTGAATGTCTCACAACAACAAACTGCAGTCTACAGCTTCCTAAAGTTC AGCATGTTAACCTAACATAAAACACAGCAAGAATCTTGTTGCCTGAACTATTTTAAATTAAGGAGCCAGATCTTTTTAGTGAGGCTATCC TGACAAGACTTGACCTAAACTTTGTTTTTATTGGTCATAACAGTCCAATTATATTATTGGCCAATTTTGTCCAATGGACAAGAAAAAAGC AAAGTTGCCAGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCGGATCATCTGAGGTCGGGAGTTCGAGAC CAGCCTGACCAATATGGAGAAACCCCGTCTCTACCAAAAATACAAAATTAGCTGTGCATGGTGGCCTATGCCTGTAATCCCAGCTACTTG GGAGGCTGAGGCAGGAGAATCGCTGGAACCCGGGAGGCAGAGGTTGTATTGAGCCGAGATTGAGCCATTGCACTCCAGCCTGGGTGACAA GAACAAAACTCCGTTTCAAAAACAAAAAAAGGAAGAAAAGAAAAAGAAAAAAGAAAAGTCAACGACACCATTATCTTGTCAAGATCAAAT >In-frame_ENST00000530173_ENST00000570618_TCGA-A2-A0CX-01A_NPEPPS_chr17_45677105_+_ARL17B_chr17_44377031_length(amino acids)=568AA_start in transcript=30_stop in transcript=1736 MASFSMDCSPSFCVPGLWNPFIIFRSRSSRRRLHSLGLAAMPEKRPFERLPADVSPINYSLCLKPDLLDFTFEGKLEAAAQVRQATNQIV MNCADIDIITASYAPEGDEEIHATGFNYQNEDEKVTLSFPSTLQTGTGTLKIDFVGELNDKMKGFYRSKYTTPSGEVRYAAVTQFEATDA RRAFPCWDEPAIKATFDISLVVPKDRVALSNMNVIDRKPYPDDENLVEVKFARTPVMSTYLVAFVVGEYDFVETRSKDGVCVRVYTPVGK AEQGKFALEVAAKTLPFYKDYFNVPYPLPKIDLIAIADFAAGAMENWGLVTYRETALLIDPKNSCSSSRQWVALVVGHELAHQWFGNLVT MEWWTHLWLNEGFASWIEYLCVDHCFPEYDIWTQFVSADYTRAQELDALDNSHPIEVSVGHPSEVDEIFDAISYSKGASVIRMLHDYIGD KDFKKGMNMYLTKFQQKNAATEDLWESLENASGKPIAAVMNTWTKQMGFPLIYVEAEQVEDDRLLRLSQKKFCAGGSYVELSASQFAQFI -------------------------------------------------------------- >In-frame_ENST00000530173_ENST00000434041_TCGA-A2-A0CX-01A_NPEPPS_chr17_45677105_+_ARL17B_chr17_44377031_length(transcript)=2070nt_BP=1618nt AAGTTACGGAAGAGTCAAGGCTGGGACCTCATGGCATCATTTTCCATGGATTGCTCTCCAAGTTTTTGTGTTCCTGGCCTTTGGAACCCC TTCATCATATTCCGCAGCCGCTCCTCTCGCCGCCGCCTCCACAGCCTGGGCCTCGCCGCGATGCCGGAGAAGAGGCCCTTCGAGCGGCTG CCTGCCGATGTCTCCCCCATCAACTACAGCCTTTGCCTCAAGCCCGACTTGCTGGACTTCACCTTCGAGGGCAAGCTGGAGGCCGCCGCC CAGGTGAGGCAGGCGACTAATCAGATTGTGATGAATTGTGCTGATATTGATATTATTACAGCTTCATATGCACCAGAAGGAGATGAAGAA ATACATGCTACAGGATTTAACTATCAGAATGAAGATGAAAAAGTCACCTTGTCTTTCCCTAGTACTCTGCAAACAGGTACGGGAACCTTA AAGATAGATTTTGTTGGAGAGCTGAATGACAAAATGAAAGGTTTCTATAGAAGTAAATATACTACCCCTTCTGGAGAGGTGCGCTATGCT GCTGTAACACAGTTTGAGGCTACTGATGCCCGAAGGGCTTTTCCTTGCTGGGATGAGCCTGCTATCAAAGCAACTTTTGATATCTCATTG GTTGTTCCTAAAGACAGAGTAGCTTTATCAAACATGAATGTAATTGACCGGAAACCATACCCTGATGATGAAAATTTAGTGGAAGTGAAG TTTGCCCGCACACCTGTTATGTCTACATATCTGGTGGCATTTGTTGTGGGTGAATATGACTTTGTAGAAACAAGGTCAAAAGATGGTGTG TGTGTCCGTGTTTACACTCCTGTTGGCAAAGCAGAGCAAGGAAAATTTGCGTTAGAGGTTGCTGCTAAAACCTTGCCTTTTTATAAGGAC TACTTCAATGTTCCTTATCCTCTACCTAAAATTGATCTCATTGCTATTGCAGACTTTGCAGCTGGTGCCATGGAGAACTGGGGCCTTGTT ACTTATAGGGAGACTGCATTGCTTATTGATCCAAAAAATTCCTGTTCTTCATCCCGCCAGTGGGTTGCTCTGGTTGTGGGACATGAACTC GCCCATCAATGGTTTGGAAATCTTGTTACTATGGAATGGTGGACTCATCTTTGGTTAAATGAAGGTTTTGCATCCTGGATTGAATATCTG TGTGTAGACCACTGCTTCCCAGAGTATGATATTTGGACTCAGTTTGTTTCTGCTGATTACACCCGTGCCCAGGAGCTTGACGCCTTAGAT AACAGCCATCCTATTGAAGTCAGTGTGGGCCATCCATCTGAGGTTGATGAGATATTTGATGCTATATCATATAGCAAAGGTGCATCTGTC ATCCGAATGCTGCATGACTACATTGGGGATAAGGACTTTAAGAAAGGAATGAACATGTATTTAACCAAGTTCCAACAAAAGAATGCTGCC ACAGAGGATCTCTGGGAAAGTTTAGAAAATGCTAGTGGTAAACCTATAGCAGCTGTGATGAATACCTGGACCAAACAAATGGGATTTCCC CTCATTTATGTGGAAGCTGAACAGGTAGAAGATGACAGATTATTGAGGTTGTCCCAAAAGAAGTTCTGTGCTGGTGGGTCATATGTTGAG CTATCAGCTTCCCAGTTTGCACAATTCATCAAGAAATTATGCGGGGTCACTGGCACAAATGATGAGGCATCTCCTGGAAGCTTAACTTCT TATCCATCCCATCTCTTGGACAGATGATGCCAGTTAATTACTTTGAATAAATATGGGCAAAAGCTTATCATTATCAACAAATGAGAAGAA AGAAACCCTATGCCAGGTAACACCAAAGCTTTGGCCCAGTGCCCTCTGTTGAAACATCCTAGGCTTTTTCTTTCCACTCCTATTACAACT GATCTGATTTGGCCCCTTCACACTTCACTCCTAGATTTTGCTAGACCTTTCTATTTTGTCTCCCTGAATTAAGCTTTTCCTTTTGGACAC TTTACATATGGATTCTAAAACAATCCTCTGCATGTCTACACTTGCACATAATGCAAAAAACAAAATAAAATAATCTTCCTGTTTTGATCA >In-frame_ENST00000530173_ENST00000434041_TCGA-A2-A0CX-01A_NPEPPS_chr17_45677105_+_ARL17B_chr17_44377031_length(amino acids)=568AA_start in transcript=30_stop in transcript=1736 MASFSMDCSPSFCVPGLWNPFIIFRSRSSRRRLHSLGLAAMPEKRPFERLPADVSPINYSLCLKPDLLDFTFEGKLEAAAQVRQATNQIV MNCADIDIITASYAPEGDEEIHATGFNYQNEDEKVTLSFPSTLQTGTGTLKIDFVGELNDKMKGFYRSKYTTPSGEVRYAAVTQFEATDA RRAFPCWDEPAIKATFDISLVVPKDRVALSNMNVIDRKPYPDDENLVEVKFARTPVMSTYLVAFVVGEYDFVETRSKDGVCVRVYTPVGK AEQGKFALEVAAKTLPFYKDYFNVPYPLPKIDLIAIADFAAGAMENWGLVTYRETALLIDPKNSCSSSRQWVALVVGHELAHQWFGNLVT MEWWTHLWLNEGFASWIEYLCVDHCFPEYDIWTQFVSADYTRAQELDALDNSHPIEVSVGHPSEVDEIFDAISYSKGASVIRMLHDYIGD KDFKKGMNMYLTKFQQKNAATEDLWESLENASGKPIAAVMNTWTKQMGFPLIYVEAEQVEDDRLLRLSQKKFCAGGSYVELSASQFAQFI -------------------------------------------------------------- >In-frame_ENST00000322157_ENST00000570618_TCGA-A2-A0CX-01A_NPEPPS_chr17_45677105_+_ARL17B_chr17_44377031_length(transcript)=2612nt_BP=1837nt GGGCGCGCCCGGCCGGCGGGGCCGCGCACGCAGCCGCCGCCACCACTTCCCCCTCTCCCTCCCTCCTTGCGGGCCCTCCTCCCCTTCCCT CCCCTCCGCCCCCTTCCCCGTAGGCAGCCCGCCCGCCAGTCCGCCCGCACCGCCTCCTTCCCAGCCCCTAGCGCTCCGGCTGGGTCTCTC CCCCGCCCCCCAGGCTCCCCCGGTCGCTCTCCTCCGGCGGTCGCCCGCGCTCGGTGGATGTGGCTGGCAGCTGCCGCCCCCTCCCTCGCT CGCCGCCTGCTCTTCCTCGGCCCTCCGCCTCCTCCCCTCCTCCTTCTCGTCTTCAGCCGCTCCTCTCGCCGCCGCCTCCACAGCCTGGGC CTCGCCGCGATGCCGGAGAAGAGGCCCTTCGAGCGGCTGCCTGCCGATGTCTCCCCCATCAACTACAGCCTTTGCCTCAAGCCCGACTTG CTGGACTTCACCTTCGAGGGCAAGCTGGAGGCCGCCGCCCAGGTGAGGCAGGCGACTAATCAGATTGTGATGAATTGTGCTGATATTGAT ATTATTACAGCTTCATATGCACCAGAAGGAGATGAAGAAATACATGCTACAGGATTTAACTATCAGAATGAAGATGAAAAAGTCACCTTG TCTTTCCCTAGTACTCTGCAAACAGGTACGGGAACCTTAAAGATAGATTTTGTTGGAGAGCTGAATGACAAAATGAAAGGTTTCTATAGA AGTAAATATACTACCCCTTCTGGAGAGGTGCGCTATGCTGCTGTAACACAGTTTGAGGCTACTGATGCCCGAAGGGCTTTTCCTTGCTGG GATGAGCCTGCTATCAAAGCAACTTTTGATATCTCATTGGTTGTTCCTAAAGACAGAGTAGCTTTATCAAACATGAATGTAATTGACCGG AAACCATACCCTGATGATGAAAATTTAGTGGAAGTGAAGTTTGCCCGCACACCTGTTATGTCTACATATCTGGTGGCATTTGTTGTGGGT GAATATGACTTTGTAGAAACAAGGTCAAAAGATGGTGTGTGTGTCCGTGTTTACACTCCTGTTGGCAAAGCAGAGCAAGGAAAATTTGCG TTAGAGGTTGCTGCTAAAACCTTGCCTTTTTATAAGGACTACTTCAATGTTCCTTATCCTCTACCTAAAATTGATCTCATTGCTATTGCA GACTTTGCAGCTGGTGCCATGGAGAACTGGGGCCTTGTTACTTATAGGGAGACTGCATTGCTTATTGATCCAAAAAATTCCTGTTCTTCA TCCCGCCAGTGGGTTGCTCTGGTTGTGGGACATGAACTCGCCCATCAATGGTTTGGAAATCTTGTTACTATGGAATGGTGGACTCATCTT TGGTTAAATGAAGGTTTTGCATCCTGGATTGAATATCTGTGTGTAGACCACTGCTTCCCAGAGTATGATATTTGGACTCAGTTTGTTTCT GCTGATTACACCCGTGCCCAGGAGCTTGACGCCTTAGATAACAGCCATCCTATTGAAGTCAGTGTGGGCCATCCATCTGAGGTTGATGAG ATATTTGATGCTATATCATATAGCAAAGGTGCATCTGTCATCCGAATGCTGCATGACTACATTGGGGATAAGGACTTTAAGAAAGGAATG AACATGTATTTAACCAAGTTCCAACAAAAGAATGCTGCCACAGAGGATCTCTGGGAAAGTTTAGAAAATGCTAGTGGTAAACCTATAGCA GCTGTGATGAATACCTGGACCAAACAAATGGGATTTCCCCTCATTTATGTGGAAGCTGAACAGGTAGAAGATGACAGATTATTGAGGTTG TCCCAAAAGAAGTTCTGTGCTGGTGGGTCATATGTTGAGCTATCAGCTTCCCAGTTTGCACAATTCATCAAGAAATTATGCGGGGTCACT GGCACAAATGATGAGGCATCTCCTGGAAGCTTAACTTCTTATCCATCCCATCTCTTGGACAGATGATGCCAGTTAATTACTTTGAATGTC TCACAACAACAAACTGCAGTCTACAGCTTCCTAAAGTTCAGCATGTTAACCTAACATAAAACACAGCAAGAATCTTGTTGCCTGAACTAT TTTAAATTAAGGAGCCAGATCTTTTTAGTGAGGCTATCCTGACAAGACTTGACCTAAACTTTGTTTTTATTGGTCATAACAGTCCAATTA TATTATTGGCCAATTTTGTCCAATGGACAAGAAAAAAGCAAAGTTGCCAGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGG CCAAGGCGGGCGGATCATCTGAGGTCGGGAGTTCGAGACCAGCCTGACCAATATGGAGAAACCCCGTCTCTACCAAAAATACAAAATTAG CTGTGCATGGTGGCCTATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTGGAACCCGGGAGGCAGAGGTTGTATTG AGCCGAGATTGAGCCATTGCACTCCAGCCTGGGTGACAAGAACAAAACTCCGTTTCAAAAACAAAAAAAGGAAGAAAAGAAAAAGAAAAA AGAAAAGTCAACGACACCATTATCTTGTCAAGATCAAATGGTTTTATTATTGTGGCAGAAGCGAGAAAATTTTGTTTATTAAAAAAAAAA >In-frame_ENST00000322157_ENST00000570618_TCGA-A2-A0CX-01A_NPEPPS_chr17_45677105_+_ARL17B_chr17_44377031_length(amino acids)=629AA_start in transcript=66_stop in transcript=1955 MRALLPFPPLRPLPRRQPARQSARTASFPAPSAPAGSLPRPPGSPGRSPPAVARARWMWLAAAAPSLARRLLFLGPPPPPLLLLVFSRSS RRRLHSLGLAAMPEKRPFERLPADVSPINYSLCLKPDLLDFTFEGKLEAAAQVRQATNQIVMNCADIDIITASYAPEGDEEIHATGFNYQ NEDEKVTLSFPSTLQTGTGTLKIDFVGELNDKMKGFYRSKYTTPSGEVRYAAVTQFEATDARRAFPCWDEPAIKATFDISLVVPKDRVAL SNMNVIDRKPYPDDENLVEVKFARTPVMSTYLVAFVVGEYDFVETRSKDGVCVRVYTPVGKAEQGKFALEVAAKTLPFYKDYFNVPYPLP KIDLIAIADFAAGAMENWGLVTYRETALLIDPKNSCSSSRQWVALVVGHELAHQWFGNLVTMEWWTHLWLNEGFASWIEYLCVDHCFPEY DIWTQFVSADYTRAQELDALDNSHPIEVSVGHPSEVDEIFDAISYSKGASVIRMLHDYIGDKDFKKGMNMYLTKFQQKNAATEDLWESLE -------------------------------------------------------------- >In-frame_ENST00000322157_ENST00000434041_TCGA-A2-A0CX-01A_NPEPPS_chr17_45677105_+_ARL17B_chr17_44377031_length(transcript)=2289nt_BP=1837nt GGGCGCGCCCGGCCGGCGGGGCCGCGCACGCAGCCGCCGCCACCACTTCCCCCTCTCCCTCCCTCCTTGCGGGCCCTCCTCCCCTTCCCT CCCCTCCGCCCCCTTCCCCGTAGGCAGCCCGCCCGCCAGTCCGCCCGCACCGCCTCCTTCCCAGCCCCTAGCGCTCCGGCTGGGTCTCTC CCCCGCCCCCCAGGCTCCCCCGGTCGCTCTCCTCCGGCGGTCGCCCGCGCTCGGTGGATGTGGCTGGCAGCTGCCGCCCCCTCCCTCGCT CGCCGCCTGCTCTTCCTCGGCCCTCCGCCTCCTCCCCTCCTCCTTCTCGTCTTCAGCCGCTCCTCTCGCCGCCGCCTCCACAGCCTGGGC CTCGCCGCGATGCCGGAGAAGAGGCCCTTCGAGCGGCTGCCTGCCGATGTCTCCCCCATCAACTACAGCCTTTGCCTCAAGCCCGACTTG CTGGACTTCACCTTCGAGGGCAAGCTGGAGGCCGCCGCCCAGGTGAGGCAGGCGACTAATCAGATTGTGATGAATTGTGCTGATATTGAT ATTATTACAGCTTCATATGCACCAGAAGGAGATGAAGAAATACATGCTACAGGATTTAACTATCAGAATGAAGATGAAAAAGTCACCTTG TCTTTCCCTAGTACTCTGCAAACAGGTACGGGAACCTTAAAGATAGATTTTGTTGGAGAGCTGAATGACAAAATGAAAGGTTTCTATAGA AGTAAATATACTACCCCTTCTGGAGAGGTGCGCTATGCTGCTGTAACACAGTTTGAGGCTACTGATGCCCGAAGGGCTTTTCCTTGCTGG GATGAGCCTGCTATCAAAGCAACTTTTGATATCTCATTGGTTGTTCCTAAAGACAGAGTAGCTTTATCAAACATGAATGTAATTGACCGG AAACCATACCCTGATGATGAAAATTTAGTGGAAGTGAAGTTTGCCCGCACACCTGTTATGTCTACATATCTGGTGGCATTTGTTGTGGGT GAATATGACTTTGTAGAAACAAGGTCAAAAGATGGTGTGTGTGTCCGTGTTTACACTCCTGTTGGCAAAGCAGAGCAAGGAAAATTTGCG TTAGAGGTTGCTGCTAAAACCTTGCCTTTTTATAAGGACTACTTCAATGTTCCTTATCCTCTACCTAAAATTGATCTCATTGCTATTGCA GACTTTGCAGCTGGTGCCATGGAGAACTGGGGCCTTGTTACTTATAGGGAGACTGCATTGCTTATTGATCCAAAAAATTCCTGTTCTTCA TCCCGCCAGTGGGTTGCTCTGGTTGTGGGACATGAACTCGCCCATCAATGGTTTGGAAATCTTGTTACTATGGAATGGTGGACTCATCTT TGGTTAAATGAAGGTTTTGCATCCTGGATTGAATATCTGTGTGTAGACCACTGCTTCCCAGAGTATGATATTTGGACTCAGTTTGTTTCT GCTGATTACACCCGTGCCCAGGAGCTTGACGCCTTAGATAACAGCCATCCTATTGAAGTCAGTGTGGGCCATCCATCTGAGGTTGATGAG ATATTTGATGCTATATCATATAGCAAAGGTGCATCTGTCATCCGAATGCTGCATGACTACATTGGGGATAAGGACTTTAAGAAAGGAATG AACATGTATTTAACCAAGTTCCAACAAAAGAATGCTGCCACAGAGGATCTCTGGGAAAGTTTAGAAAATGCTAGTGGTAAACCTATAGCA GCTGTGATGAATACCTGGACCAAACAAATGGGATTTCCCCTCATTTATGTGGAAGCTGAACAGGTAGAAGATGACAGATTATTGAGGTTG TCCCAAAAGAAGTTCTGTGCTGGTGGGTCATATGTTGAGCTATCAGCTTCCCAGTTTGCACAATTCATCAAGAAATTATGCGGGGTCACT GGCACAAATGATGAGGCATCTCCTGGAAGCTTAACTTCTTATCCATCCCATCTCTTGGACAGATGATGCCAGTTAATTACTTTGAATAAA TATGGGCAAAAGCTTATCATTATCAACAAATGAGAAGAAAGAAACCCTATGCCAGGTAACACCAAAGCTTTGGCCCAGTGCCCTCTGTTG AAACATCCTAGGCTTTTTCTTTCCACTCCTATTACAACTGATCTGATTTGGCCCCTTCACACTTCACTCCTAGATTTTGCTAGACCTTTC TATTTTGTCTCCCTGAATTAAGCTTTTCCTTTTGGACACTTTACATATGGATTCTAAAACAATCCTCTGCATGTCTACACTTGCACATAA >In-frame_ENST00000322157_ENST00000434041_TCGA-A2-A0CX-01A_NPEPPS_chr17_45677105_+_ARL17B_chr17_44377031_length(amino acids)=629AA_start in transcript=66_stop in transcript=1955 MRALLPFPPLRPLPRRQPARQSARTASFPAPSAPAGSLPRPPGSPGRSPPAVARARWMWLAAAAPSLARRLLFLGPPPPPLLLLVFSRSS RRRLHSLGLAAMPEKRPFERLPADVSPINYSLCLKPDLLDFTFEGKLEAAAQVRQATNQIVMNCADIDIITASYAPEGDEEIHATGFNYQ NEDEKVTLSFPSTLQTGTGTLKIDFVGELNDKMKGFYRSKYTTPSGEVRYAAVTQFEATDARRAFPCWDEPAIKATFDISLVVPKDRVAL SNMNVIDRKPYPDDENLVEVKFARTPVMSTYLVAFVVGEYDFVETRSKDGVCVRVYTPVGKAEQGKFALEVAAKTLPFYKDYFNVPYPLP KIDLIAIADFAAGAMENWGLVTYRETALLIDPKNSCSSSRQWVALVVGHELAHQWFGNLVTMEWWTHLWLNEGFASWIEYLCVDHCFPEY DIWTQFVSADYTRAQELDALDNSHPIEVSVGHPSEVDEIFDAISYSKGASVIRMLHDYIGDKDFKKGMNMYLTKFQQKNAATEDLWESLE -------------------------------------------------------------- >In-frame_ENST00000544660_ENST00000570618_TCGA-A2-A0CX-01A_NPEPPS_chr17_45677105_+_ARL17B_chr17_44377031_length(transcript)=2241nt_BP=1466nt CCTCGCTCGCCGCCTGCTCTTCCTCGGCCCTCCGCCTCCTCCCCTCCTCCTTCTCGTCTTCAGCCGCTCCTCTCGCCGCCGCCTCCACAG CCTGGGCCTCGCCGCGATGCCGGAGAAGAGGCCCTTCGAGCGGCTGCCTGCCGATGTCTCCCCCATCAACTACAGCCTTTGCCTCAAGCC CGACTTGCTGGACTTCACCTTCGAGGGCAAGCTGGAGGCCGCCGCCCAGGTGAGGCAGGCGACTAATCAGATTGTGATGAATTGTGCTGA TATTGATATTATTACAGCTTCATATGCACCAGAAGGAGATGAAGAAATACATGCTACAGGATTTAACTATCAGAATGAAGATGAAAAAGT CACCTTGTCTTTCCCTAGTACTCTGCAAACAGGTACGGGAACCTTAAAGATAGATTTTGTTGGAGAGCTGAATGACAAAATGAAAGGTTT CTATAGAAGTAAATATACTACCCCTTCTGGAGAGGTGCGCTATGCTGCTGTAACACAGTTTGAGAATGTAATTGACCGGAAACCATACCC TGATGATGAAAATTTAGTGGAAGTGAAGTTTGCCCGCACACCTGTTATGTCTACATATCTGGTGGCATTTGTTGTGGGTGAATATGACTT TGTAGAAACAAGGTCAAAAGATGGTGTGTGTGTCCGTGTTTACACTCCTGTTGGCAAAGCAGAGCAAGGAAAATTTGCGTTAGAGGTTGC TGCTAAAACCTTGCCTTTTTATAAGGACTACTTCAATGTTCCTTATCCTCTACCTAAAATTGATCTCATTGCTATTGCAGACTTTGCAGC TGGTGCCATGGAGAACTGGGGCCTTGTTACTTATAGGGAGACTGCATTGCTTATTGATCCAAAAAATTCCTGTTCTTCATCCCGCCAGTG GGTTGCTCTGGTTGTGGGACATGAACTCGCCCATCAATGGTTTGGAAATCTTGTTACTATGGAATGGTGGACTCATCTTTGGTTAAATGA AGGTTTTGCATCCTGGATTGAATATCTGTGTGTAGACCACTGCTTCCCAGAGTATGATATTTGGACTCAGTTTGTTTCTGCTGATTACAC CCGTGCCCAGGAGCTTGACGCCTTAGATAACAGCCATCCTATTGAAGTCAGTGTGGGCCATCCATCTGAGGTTGATGAGATATTTGATGC TATATCATATAGCAAAGGTGCATCTGTCATCCGAATGCTGCATGACTACATTGGGGATAAGGACTTTAAGAAAGGAATGAACATGTATTT AACCAAGTTCCAACAAAAGAATGCTGCCACAGAGGATCTCTGGGAAAGTTTAGAAAATGCTAGTGGTAAACCTATAGCAGCTGTGATGAA TACCTGGACCAAACAAATGGGATTTCCCCTCATTTATGTGGAAGCTGAACAGGTAGAAGATGACAGATTATTGAGGTTGTCCCAAAAGAA GTTCTGTGCTGGTGGGTCATATGTTGAGCTATCAGCTTCCCAGTTTGCACAATTCATCAAGAAATTATGCGGGGTCACTGGCACAAATGA TGAGGCATCTCCTGGAAGCTTAACTTCTTATCCATCCCATCTCTTGGACAGATGATGCCAGTTAATTACTTTGAATGTCTCACAACAACA AACTGCAGTCTACAGCTTCCTAAAGTTCAGCATGTTAACCTAACATAAAACACAGCAAGAATCTTGTTGCCTGAACTATTTTAAATTAAG GAGCCAGATCTTTTTAGTGAGGCTATCCTGACAAGACTTGACCTAAACTTTGTTTTTATTGGTCATAACAGTCCAATTATATTATTGGCC AATTTTGTCCAATGGACAAGAAAAAAGCAAAGTTGCCAGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGC GGATCATCTGAGGTCGGGAGTTCGAGACCAGCCTGACCAATATGGAGAAACCCCGTCTCTACCAAAAATACAAAATTAGCTGTGCATGGT GGCCTATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTGGAACCCGGGAGGCAGAGGTTGTATTGAGCCGAGATTG AGCCATTGCACTCCAGCCTGGGTGACAAGAACAAAACTCCGTTTCAAAAACAAAAAAAGGAAGAAAAGAAAAAGAAAAAAGAAAAGTCAA >In-frame_ENST00000544660_ENST00000570618_TCGA-A2-A0CX-01A_NPEPPS_chr17_45677105_+_ARL17B_chr17_44377031_length(amino acids)=523AA_start in transcript=13_stop in transcript=1584 MLFLGPPPPPLLLLVFSRSSRRRLHSLGLAAMPEKRPFERLPADVSPINYSLCLKPDLLDFTFEGKLEAAAQVRQATNQIVMNCADIDII TASYAPEGDEEIHATGFNYQNEDEKVTLSFPSTLQTGTGTLKIDFVGELNDKMKGFYRSKYTTPSGEVRYAAVTQFENVIDRKPYPDDEN LVEVKFARTPVMSTYLVAFVVGEYDFVETRSKDGVCVRVYTPVGKAEQGKFALEVAAKTLPFYKDYFNVPYPLPKIDLIAIADFAAGAME NWGLVTYRETALLIDPKNSCSSSRQWVALVVGHELAHQWFGNLVTMEWWTHLWLNEGFASWIEYLCVDHCFPEYDIWTQFVSADYTRAQE LDALDNSHPIEVSVGHPSEVDEIFDAISYSKGASVIRMLHDYIGDKDFKKGMNMYLTKFQQKNAATEDLWESLENASGKPIAAVMNTWTK -------------------------------------------------------------- >In-frame_ENST00000544660_ENST00000434041_TCGA-A2-A0CX-01A_NPEPPS_chr17_45677105_+_ARL17B_chr17_44377031_length(transcript)=1918nt_BP=1466nt CCTCGCTCGCCGCCTGCTCTTCCTCGGCCCTCCGCCTCCTCCCCTCCTCCTTCTCGTCTTCAGCCGCTCCTCTCGCCGCCGCCTCCACAG CCTGGGCCTCGCCGCGATGCCGGAGAAGAGGCCCTTCGAGCGGCTGCCTGCCGATGTCTCCCCCATCAACTACAGCCTTTGCCTCAAGCC CGACTTGCTGGACTTCACCTTCGAGGGCAAGCTGGAGGCCGCCGCCCAGGTGAGGCAGGCGACTAATCAGATTGTGATGAATTGTGCTGA TATTGATATTATTACAGCTTCATATGCACCAGAAGGAGATGAAGAAATACATGCTACAGGATTTAACTATCAGAATGAAGATGAAAAAGT CACCTTGTCTTTCCCTAGTACTCTGCAAACAGGTACGGGAACCTTAAAGATAGATTTTGTTGGAGAGCTGAATGACAAAATGAAAGGTTT CTATAGAAGTAAATATACTACCCCTTCTGGAGAGGTGCGCTATGCTGCTGTAACACAGTTTGAGAATGTAATTGACCGGAAACCATACCC TGATGATGAAAATTTAGTGGAAGTGAAGTTTGCCCGCACACCTGTTATGTCTACATATCTGGTGGCATTTGTTGTGGGTGAATATGACTT TGTAGAAACAAGGTCAAAAGATGGTGTGTGTGTCCGTGTTTACACTCCTGTTGGCAAAGCAGAGCAAGGAAAATTTGCGTTAGAGGTTGC TGCTAAAACCTTGCCTTTTTATAAGGACTACTTCAATGTTCCTTATCCTCTACCTAAAATTGATCTCATTGCTATTGCAGACTTTGCAGC TGGTGCCATGGAGAACTGGGGCCTTGTTACTTATAGGGAGACTGCATTGCTTATTGATCCAAAAAATTCCTGTTCTTCATCCCGCCAGTG GGTTGCTCTGGTTGTGGGACATGAACTCGCCCATCAATGGTTTGGAAATCTTGTTACTATGGAATGGTGGACTCATCTTTGGTTAAATGA AGGTTTTGCATCCTGGATTGAATATCTGTGTGTAGACCACTGCTTCCCAGAGTATGATATTTGGACTCAGTTTGTTTCTGCTGATTACAC CCGTGCCCAGGAGCTTGACGCCTTAGATAACAGCCATCCTATTGAAGTCAGTGTGGGCCATCCATCTGAGGTTGATGAGATATTTGATGC TATATCATATAGCAAAGGTGCATCTGTCATCCGAATGCTGCATGACTACATTGGGGATAAGGACTTTAAGAAAGGAATGAACATGTATTT AACCAAGTTCCAACAAAAGAATGCTGCCACAGAGGATCTCTGGGAAAGTTTAGAAAATGCTAGTGGTAAACCTATAGCAGCTGTGATGAA TACCTGGACCAAACAAATGGGATTTCCCCTCATTTATGTGGAAGCTGAACAGGTAGAAGATGACAGATTATTGAGGTTGTCCCAAAAGAA GTTCTGTGCTGGTGGGTCATATGTTGAGCTATCAGCTTCCCAGTTTGCACAATTCATCAAGAAATTATGCGGGGTCACTGGCACAAATGA TGAGGCATCTCCTGGAAGCTTAACTTCTTATCCATCCCATCTCTTGGACAGATGATGCCAGTTAATTACTTTGAATAAATATGGGCAAAA GCTTATCATTATCAACAAATGAGAAGAAAGAAACCCTATGCCAGGTAACACCAAAGCTTTGGCCCAGTGCCCTCTGTTGAAACATCCTAG GCTTTTTCTTTCCACTCCTATTACAACTGATCTGATTTGGCCCCTTCACACTTCACTCCTAGATTTTGCTAGACCTTTCTATTTTGTCTC CCTGAATTAAGCTTTTCCTTTTGGACACTTTACATATGGATTCTAAAACAATCCTCTGCATGTCTACACTTGCACATAATGCAAAAAACA >In-frame_ENST00000544660_ENST00000434041_TCGA-A2-A0CX-01A_NPEPPS_chr17_45677105_+_ARL17B_chr17_44377031_length(amino acids)=523AA_start in transcript=13_stop in transcript=1584 MLFLGPPPPPLLLLVFSRSSRRRLHSLGLAAMPEKRPFERLPADVSPINYSLCLKPDLLDFTFEGKLEAAAQVRQATNQIVMNCADIDII TASYAPEGDEEIHATGFNYQNEDEKVTLSFPSTLQTGTGTLKIDFVGELNDKMKGFYRSKYTTPSGEVRYAAVTQFENVIDRKPYPDDEN LVEVKFARTPVMSTYLVAFVVGEYDFVETRSKDGVCVRVYTPVGKAEQGKFALEVAAKTLPFYKDYFNVPYPLPKIDLIAIADFAAGAME NWGLVTYRETALLIDPKNSCSSSRQWVALVVGHELAHQWFGNLVTMEWWTHLWLNEGFASWIEYLCVDHCFPEYDIWTQFVSADYTRAQE LDALDNSHPIEVSVGHPSEVDEIFDAISYSKGASVIRMLHDYIGDKDFKKGMNMYLTKFQQKNAATEDLWESLENASGKPIAAVMNTWTK -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for NPEPPS-ARL17B |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for NPEPPS-ARL17B |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for NPEPPS-ARL17B |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |