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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:NSMCE2-PBX3 (FusionGDB2 ID:60159) |
Fusion Gene Summary for NSMCE2-PBX3 |
Fusion gene summary |
Fusion gene information | Fusion gene name: NSMCE2-PBX3 | Fusion gene ID: 60159 | Hgene | Tgene | Gene symbol | NSMCE2 | PBX3 | Gene ID | 286053 | 5090 |
Gene name | NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase | PBX homeobox 3 | |
Synonyms | C8orf36|MMS21|NSE2|ZMIZ7 | - | |
Cytomap | 8q24.13 | 9q33.3 | |
Type of gene | protein-coding | protein-coding | |
Description | E3 SUMO-protein ligase NSE2E3 SUMO-protein transferase NSE2NSMCE2/PVT1 fusionPVT1/NSMCE2 fusionmethyl methanesulfonate sensitivity gene 21non-SMC element 2, MMS21 homolognon-structural maintenance of chromosomes element 2 homologzinc finger, MIZ-ty | pre-B-cell leukemia transcription factor 3homeobox protein PBX3pre-B-cell leukemia homeobox 3 | |
Modification date | 20200313 | 20200320 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000287437, ENST00000522563, ENST00000517315, ENST00000521460, | ENST00000342287, ENST00000373487, ENST00000373489, ENST00000373483, ENST00000447726, ENST00000538998, | |
Fusion gene scores | * DoF score | 23 X 24 X 7=3864 | 10 X 10 X 7=700 |
# samples | 29 | 12 | |
** MAII score | log2(29/3864*10)=-3.73597028882084 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(12/700*10)=-2.54432051622381 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: NSMCE2 [Title/Abstract] AND PBX3 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | NSMCE2(126194498)-PBX3(128677965), # samples:3 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene breakpoints across NSMCE2 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across PBX3 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | OV | TCGA-24-1567-01A | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + |
ChimerDB4 | OV | TCGA-24-1567 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + |
ChimerDB4 | OV | TCGA-24-1567-01A | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + |
ChimerDB4 | OV | TCGA-24-1567-01A | NSMCE2 | chr8 | 126194498 | - | PBX3 | chr9 | 128677965 | + |
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Fusion Gene ORF analysis for NSMCE2-PBX3 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000287437 | ENST00000342287 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + |
In-frame | ENST00000287437 | ENST00000373487 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + |
In-frame | ENST00000287437 | ENST00000373489 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + |
5CDS-intron | ENST00000287437 | ENST00000373483 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + |
5CDS-intron | ENST00000287437 | ENST00000447726 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + |
5CDS-3UTR | ENST00000287437 | ENST00000538998 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + |
In-frame | ENST00000522563 | ENST00000342287 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + |
In-frame | ENST00000522563 | ENST00000373487 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + |
In-frame | ENST00000522563 | ENST00000373489 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + |
5CDS-intron | ENST00000522563 | ENST00000373483 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + |
5CDS-intron | ENST00000522563 | ENST00000447726 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + |
5CDS-3UTR | ENST00000522563 | ENST00000538998 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + |
In-frame | ENST00000517315 | ENST00000342287 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + |
In-frame | ENST00000517315 | ENST00000373487 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + |
In-frame | ENST00000517315 | ENST00000373489 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + |
5CDS-intron | ENST00000517315 | ENST00000373483 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + |
5CDS-intron | ENST00000517315 | ENST00000447726 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + |
5CDS-3UTR | ENST00000517315 | ENST00000538998 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + |
intron-3CDS | ENST00000521460 | ENST00000342287 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + |
intron-3CDS | ENST00000521460 | ENST00000373487 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + |
intron-3CDS | ENST00000521460 | ENST00000373489 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + |
intron-intron | ENST00000521460 | ENST00000373483 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + |
intron-intron | ENST00000521460 | ENST00000447726 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + |
intron-3UTR | ENST00000521460 | ENST00000538998 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + |
In-frame | ENST00000287437 | ENST00000342287 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + |
In-frame | ENST00000287437 | ENST00000373487 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + |
In-frame | ENST00000287437 | ENST00000373489 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + |
5CDS-intron | ENST00000287437 | ENST00000373483 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + |
5CDS-intron | ENST00000287437 | ENST00000447726 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + |
5CDS-3UTR | ENST00000287437 | ENST00000538998 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + |
In-frame | ENST00000522563 | ENST00000342287 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + |
In-frame | ENST00000522563 | ENST00000373487 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + |
In-frame | ENST00000522563 | ENST00000373489 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + |
5CDS-intron | ENST00000522563 | ENST00000373483 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + |
5CDS-intron | ENST00000522563 | ENST00000447726 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + |
5CDS-3UTR | ENST00000522563 | ENST00000538998 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + |
In-frame | ENST00000517315 | ENST00000342287 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + |
In-frame | ENST00000517315 | ENST00000373487 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + |
In-frame | ENST00000517315 | ENST00000373489 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + |
5CDS-intron | ENST00000517315 | ENST00000373483 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + |
5CDS-intron | ENST00000517315 | ENST00000447726 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + |
5CDS-3UTR | ENST00000517315 | ENST00000538998 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + |
intron-3CDS | ENST00000521460 | ENST00000342287 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + |
intron-3CDS | ENST00000521460 | ENST00000373487 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + |
intron-3CDS | ENST00000521460 | ENST00000373489 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + |
intron-intron | ENST00000521460 | ENST00000373483 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + |
intron-intron | ENST00000521460 | ENST00000447726 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + |
intron-3UTR | ENST00000521460 | ENST00000538998 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000287437 | NSMCE2 | chr8 | 126194498 | + | ENST00000342287 | PBX3 | chr9 | 128677965 | + | 3006 | 634 | 120 | 1415 | 431 |
ENST00000287437 | NSMCE2 | chr8 | 126194498 | + | ENST00000373487 | PBX3 | chr9 | 128677965 | + | 3182 | 634 | 120 | 1727 | 535 |
ENST00000287437 | NSMCE2 | chr8 | 126194498 | + | ENST00000373489 | PBX3 | chr9 | 128677965 | + | 2846 | 634 | 120 | 1664 | 514 |
ENST00000522563 | NSMCE2 | chr8 | 126194498 | + | ENST00000342287 | PBX3 | chr9 | 128677965 | + | 2893 | 521 | 103 | 1302 | 399 |
ENST00000522563 | NSMCE2 | chr8 | 126194498 | + | ENST00000373487 | PBX3 | chr9 | 128677965 | + | 3069 | 521 | 103 | 1614 | 503 |
ENST00000522563 | NSMCE2 | chr8 | 126194498 | + | ENST00000373489 | PBX3 | chr9 | 128677965 | + | 2733 | 521 | 103 | 1551 | 482 |
ENST00000517315 | NSMCE2 | chr8 | 126194498 | + | ENST00000342287 | PBX3 | chr9 | 128677965 | + | 2809 | 437 | 199 | 1218 | 339 |
ENST00000517315 | NSMCE2 | chr8 | 126194498 | + | ENST00000373487 | PBX3 | chr9 | 128677965 | + | 2985 | 437 | 199 | 1530 | 443 |
ENST00000517315 | NSMCE2 | chr8 | 126194498 | + | ENST00000373489 | PBX3 | chr9 | 128677965 | + | 2649 | 437 | 199 | 1467 | 422 |
ENST00000287437 | NSMCE2 | chr8 | 126194498 | + | ENST00000342287 | PBX3 | chr9 | 128677964 | + | 3006 | 634 | 120 | 1415 | 431 |
ENST00000287437 | NSMCE2 | chr8 | 126194498 | + | ENST00000373487 | PBX3 | chr9 | 128677964 | + | 3182 | 634 | 120 | 1727 | 535 |
ENST00000287437 | NSMCE2 | chr8 | 126194498 | + | ENST00000373489 | PBX3 | chr9 | 128677964 | + | 2846 | 634 | 120 | 1664 | 514 |
ENST00000522563 | NSMCE2 | chr8 | 126194498 | + | ENST00000342287 | PBX3 | chr9 | 128677964 | + | 2893 | 521 | 103 | 1302 | 399 |
ENST00000522563 | NSMCE2 | chr8 | 126194498 | + | ENST00000373487 | PBX3 | chr9 | 128677964 | + | 3069 | 521 | 103 | 1614 | 503 |
ENST00000522563 | NSMCE2 | chr8 | 126194498 | + | ENST00000373489 | PBX3 | chr9 | 128677964 | + | 2733 | 521 | 103 | 1551 | 482 |
ENST00000517315 | NSMCE2 | chr8 | 126194498 | + | ENST00000342287 | PBX3 | chr9 | 128677964 | + | 2809 | 437 | 199 | 1218 | 339 |
ENST00000517315 | NSMCE2 | chr8 | 126194498 | + | ENST00000373487 | PBX3 | chr9 | 128677964 | + | 2985 | 437 | 199 | 1530 | 443 |
ENST00000517315 | NSMCE2 | chr8 | 126194498 | + | ENST00000373489 | PBX3 | chr9 | 128677964 | + | 2649 | 437 | 199 | 1467 | 422 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000287437 | ENST00000342287 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + | 0.000349702 | 0.99965024 |
ENST00000287437 | ENST00000373487 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + | 0.000277558 | 0.9997224 |
ENST00000287437 | ENST00000373489 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + | 0.000353402 | 0.99964654 |
ENST00000522563 | ENST00000342287 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + | 0.000347175 | 0.99965286 |
ENST00000522563 | ENST00000373487 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + | 0.000287474 | 0.9997125 |
ENST00000522563 | ENST00000373489 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + | 0.00036621 | 0.9996338 |
ENST00000517315 | ENST00000342287 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + | 0.00089602 | 0.99910396 |
ENST00000517315 | ENST00000373487 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + | 0.000607373 | 0.9993926 |
ENST00000517315 | ENST00000373489 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677965 | + | 0.000769588 | 0.9992304 |
ENST00000287437 | ENST00000342287 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + | 0.000349702 | 0.99965024 |
ENST00000287437 | ENST00000373487 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + | 0.000277558 | 0.9997224 |
ENST00000287437 | ENST00000373489 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + | 0.000353402 | 0.99964654 |
ENST00000522563 | ENST00000342287 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + | 0.000347175 | 0.99965286 |
ENST00000522563 | ENST00000373487 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + | 0.000287474 | 0.9997125 |
ENST00000522563 | ENST00000373489 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + | 0.00036621 | 0.9996338 |
ENST00000517315 | ENST00000342287 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + | 0.00089602 | 0.99910396 |
ENST00000517315 | ENST00000373487 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + | 0.000607373 | 0.9993926 |
ENST00000517315 | ENST00000373489 | NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + | 0.000769588 | 0.9992304 |
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Fusion Genomic Features for NSMCE2-PBX3 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + | 6.30E-06 | 0.9999937 |
NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + | 6.30E-06 | 0.9999937 |
NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + | 6.30E-06 | 0.9999937 |
NSMCE2 | chr8 | 126194498 | + | PBX3 | chr9 | 128677964 | + | 6.30E-06 | 0.9999937 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for NSMCE2-PBX3 |
Go to FGviewer for the breakpoints of chr8:126194498-chr9:128677965 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | PBX3 | chr8:126194498 | chr9:128677964 | ENST00000342287 | 1 | 8 | 130_138 | 91.33333333333333 | 764.6666666666666 | Compositional bias | Note=Poly-Ala | |
Tgene | PBX3 | chr8:126194498 | chr9:128677964 | ENST00000373483 | 0 | 8 | 130_138 | 0 | 254.0 | Compositional bias | Note=Poly-Ala | |
Tgene | PBX3 | chr8:126194498 | chr9:128677964 | ENST00000373489 | 1 | 9 | 130_138 | 91.33333333333333 | 435.0 | Compositional bias | Note=Poly-Ala | |
Tgene | PBX3 | chr8:126194498 | chr9:128677964 | ENST00000447726 | 1 | 9 | 130_138 | 16.333333333333332 | 360.0 | Compositional bias | Note=Poly-Ala | |
Tgene | PBX3 | chr8:126194498 | chr9:128677965 | ENST00000342287 | 1 | 8 | 130_138 | 91.33333333333333 | 764.6666666666666 | Compositional bias | Note=Poly-Ala | |
Tgene | PBX3 | chr8:126194498 | chr9:128677965 | ENST00000373483 | 0 | 8 | 130_138 | 0 | 254.0 | Compositional bias | Note=Poly-Ala | |
Tgene | PBX3 | chr8:126194498 | chr9:128677965 | ENST00000373489 | 1 | 9 | 130_138 | 91.33333333333333 | 435.0 | Compositional bias | Note=Poly-Ala | |
Tgene | PBX3 | chr8:126194498 | chr9:128677965 | ENST00000447726 | 1 | 9 | 130_138 | 16.333333333333332 | 360.0 | Compositional bias | Note=Poly-Ala | |
Tgene | PBX3 | chr8:126194498 | chr9:128677964 | ENST00000342287 | 1 | 8 | 235_297 | 91.33333333333333 | 764.6666666666666 | DNA binding | Homeobox%3B TALE-type | |
Tgene | PBX3 | chr8:126194498 | chr9:128677964 | ENST00000373483 | 0 | 8 | 235_297 | 0 | 254.0 | DNA binding | Homeobox%3B TALE-type | |
Tgene | PBX3 | chr8:126194498 | chr9:128677964 | ENST00000373489 | 1 | 9 | 235_297 | 91.33333333333333 | 435.0 | DNA binding | Homeobox%3B TALE-type | |
Tgene | PBX3 | chr8:126194498 | chr9:128677964 | ENST00000447726 | 1 | 9 | 235_297 | 16.333333333333332 | 360.0 | DNA binding | Homeobox%3B TALE-type | |
Tgene | PBX3 | chr8:126194498 | chr9:128677965 | ENST00000342287 | 1 | 8 | 235_297 | 91.33333333333333 | 764.6666666666666 | DNA binding | Homeobox%3B TALE-type | |
Tgene | PBX3 | chr8:126194498 | chr9:128677965 | ENST00000373483 | 0 | 8 | 235_297 | 0 | 254.0 | DNA binding | Homeobox%3B TALE-type | |
Tgene | PBX3 | chr8:126194498 | chr9:128677965 | ENST00000373489 | 1 | 9 | 235_297 | 91.33333333333333 | 435.0 | DNA binding | Homeobox%3B TALE-type | |
Tgene | PBX3 | chr8:126194498 | chr9:128677965 | ENST00000447726 | 1 | 9 | 235_297 | 16.333333333333332 | 360.0 | DNA binding | Homeobox%3B TALE-type | |
Tgene | PBX3 | chr8:126194498 | chr9:128677964 | ENST00000373483 | 0 | 8 | 43_234 | 0 | 254.0 | Domain | PBC | |
Tgene | PBX3 | chr8:126194498 | chr9:128677964 | ENST00000447726 | 1 | 9 | 43_234 | 16.333333333333332 | 360.0 | Domain | PBC | |
Tgene | PBX3 | chr8:126194498 | chr9:128677965 | ENST00000373483 | 0 | 8 | 43_234 | 0 | 254.0 | Domain | PBC | |
Tgene | PBX3 | chr8:126194498 | chr9:128677965 | ENST00000447726 | 1 | 9 | 43_234 | 16.333333333333332 | 360.0 | Domain | PBC |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | NSMCE2 | chr8:126194498 | chr9:128677964 | ENST00000287437 | + | 5 | 8 | 154_236 | 139.33333333333334 | 248.0 | Zinc finger | SP-RING-type |
Hgene | NSMCE2 | chr8:126194498 | chr9:128677964 | ENST00000522563 | + | 4 | 7 | 154_236 | 139.33333333333334 | 248.0 | Zinc finger | SP-RING-type |
Hgene | NSMCE2 | chr8:126194498 | chr9:128677965 | ENST00000287437 | + | 5 | 8 | 154_236 | 139.33333333333334 | 248.0 | Zinc finger | SP-RING-type |
Hgene | NSMCE2 | chr8:126194498 | chr9:128677965 | ENST00000522563 | + | 4 | 7 | 154_236 | 139.33333333333334 | 248.0 | Zinc finger | SP-RING-type |
Tgene | PBX3 | chr8:126194498 | chr9:128677964 | ENST00000342287 | 1 | 8 | 43_234 | 91.33333333333333 | 764.6666666666666 | Domain | PBC | |
Tgene | PBX3 | chr8:126194498 | chr9:128677964 | ENST00000373489 | 1 | 9 | 43_234 | 91.33333333333333 | 435.0 | Domain | PBC | |
Tgene | PBX3 | chr8:126194498 | chr9:128677965 | ENST00000342287 | 1 | 8 | 43_234 | 91.33333333333333 | 764.6666666666666 | Domain | PBC | |
Tgene | PBX3 | chr8:126194498 | chr9:128677965 | ENST00000373489 | 1 | 9 | 43_234 | 91.33333333333333 | 435.0 | Domain | PBC |
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Fusion Gene Sequence for NSMCE2-PBX3 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000287437_ENST00000342287_TCGA-24-1567-01A_NSMCE2_chr8_126194498_+_PBX3_chr9_128677965_length(transcript)=3006nt_BP=634nt GCCCGCTCTCACTTTTCAGCGGCAGGCGAAGGGGGCTGAGGAAAGGAGGTGGGTCTAGGCAGGGGAAATTGGGGTGCCACCAGACGGAGA CAGCTTGGACTACCAGAATCAAGCACTCTTTTGGAAGAGGGTAATCTCTCTCCAAAAACTGAGGACACTTACCTTCCCCATATATTGAGT CCAGCTGTGTTTGGTGGCCCAGGTACTAATTTCAAGATGCCAGGACGTTCCAGTTCAAATTCAGGTTCAACTGGTTTCATCTCCTTCAGT GGTGTAGAGTCTGCTCTCTCCTCCTTGAAAAACTTCCAAGCCTGTATCAACTCTGGTATGGACACAGCTTCTAGTGTTGCTTTGGATCTT GTGGAAAGTCAGACTGAAGTGAGTAGTGAATATAGTATGGACAAGGCAATGGTTGAATTTGCTACATTGGATCGGCAACTAAACCATTAT GTAAAGGCTGTTCAATCTACAATAAATCATGTGAAAGAAGAACGTCCAGAAAAAATACCAGATTTAAAATTATTGGTAGAGAAGAAATTT TTGGCTTTACAGAGCAAGAATTCTGATGCAGACTTTCAAAATAATGAAAAATTTGTACAGTTTAAACAACAGCTGAAAGAACTAAAGAAG CAATGTCTCAGCATCAGAGGAGCCCAGGAGGAGGACCCTCCCGATCCCCAGCTAATGAGACTGGACAATATGCTTTTGGCAGAAGGGGTT TCAGGTCCTGAGAAAGGTGGGGGATCGGCGGCAGCAGCTGCAGCCGCGGCAGCCTCTGGAGGTTCTTCAGATAACTCTATTGAACACTCA GATTACAGAGCCAAATTGACCCAGATCAGACAAATCTATCACACAGAACTGGAGAAATATGAACAGGCATGTAATGAATTTACTACACAT GTGATGAACCTTCTCCGAGAACAGAGTAGAACACGTCCCATTTCTCCAAAAGAGATTGAAAGAATGGTGGGCATCATCCATCGAAAATTT AGTTCCATTCAGATGCAGCTCAAACAAAGCACTTGTGAAGCAGTTATGATTTTAAGATCAAGGTTCCTTGATGCCAGACGGAAAAGGCGT AACTTCAGTAAACAGGCCACAGAAATCTTGAATGAATATTTTTACTCACACCTCAGCAACCCCTACCCCAGTGAAGAAGCCAAAGAGGAG CTGGCCAAGAAATGCAGCATCACAGTGTCACAGGTATCCAATTGGTTTGGCAACAAACGAATCAGGTACAAGAAGAACATTGGCAAGTTT CAGGAAGAAGCCAACCTCTATGCTGCAAAGACGGCCGTGACAGCTGCACACGCAGTAGCAGCAGCTGTGCAGAACAACCAGACCAATTCG CCCACCACACCAAATTCCGGTGGATACCCTCCGTCATGTTATCAATCAGACGGGAGGCTACAGTGATGGCCTTGGAGGAAATTCACTGTA CAGTCCACATAATTTAAATGCTAATGGAGGCTGGCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACAGAAGGCCCAGGAAGTGT GCACTCGGATACCTCTAACTAATCTCTGGCCACACTTTTCCCTGAGCTACATGCCTTGATAAGTGCATTCAGAGCAATAGGAGGAAAAGG AAAGCGTTTTTGTAGCCCACCATCTACAGCTTTACTGTAAAACCTTGTCTTATTCGAGAACTTGGTAAATCTGTTTTTTAAGGAATCATA ATCATTTGTATTTATACTTAAAAACACACAATGTTAAAAAAAATAAAGCACTTTATCCAATTAGGCCAAGATTTAACATTGTTGACAGTC CTGTAGCTATTTTATCATAATTTATTATCAATATTTTACATTAATGGTTTCACAGTTGCCAATTACTTGGCCTTAAGGGTAAAAAGTACA ATATACACTAAACCTCAACCGTTAAAGCAGATGCAAAAATTCACCTCACCTAAATTGAACTTCTTGCATATTTCCATTACTGACTTGGAT TGTCTTTCTTTCATATCACTAATGGAGTTGGAATAAAGAGCTGTTTGCCTATCCCTGTTAATGATGGTTGTGTTTAAGAATCTTCCTCGT CACGTTTGTGTTCAGATCTCTTATGTTATAATTAGATCAGAGACTGGTAGCATCGTTTCTCTCTCTGAAAGCACCAGTGCCCAGAGTCTG CTCGGTAATAAAATTATGGATCCAGATTGTTCTGAGAGACGAAGATACTTGCTGCTGATAGAGGTGAAAACGAGATTGATCCGTCTGGGG TTTTACGGTGTGCACTGGGTGCTGCACAGACTTGTCAAGGTTTGCTACGTCCTCTGGGCATCTGCAAAAGGCCCTGCTCTCTGGAGTGTT GTATATAGTGTAGCAAAAGAGTATTTATACATCCCACCAATCAAAACACAGCTTTATTACCTCATGCGAACTCATACAAACCAATAGAAT TTCAACATGTTCTGTAGCTTAGAGTGCTCACTTACTACCTCTGAACAATACTCACGCTGTAGTTTGTCTCTTTCTTATCTTTTTGCATCT TGTAATTAACTCTTTGTTTCCCTTCATAAAATGTAATGTACATTGTAATCTTTTAAAAGAAAAATCAGGGTTGCACTTGCAACTTTTAAA AAACCGAGTGTGGAAACATTGGGTCTTAATTCAACACAGGATCGGTAAAACTGTTGTAAATACTGAGAAACATTTTGAATGTTCTTCATC TTATTACTAATCCATGCAAAAAAAAAAAAAAAAGCAGCGACTAATTGTGATGCATTCAGATTTCAGTATTCAGTACTGTATATTTCACCC TGTGTAATGGGGCCCCCTCTCCTTTCTCTCTTTTTGTATTGTATGCGATTCTGAAACTGATTGAGTCATGAAAATAATTTGTGGCGGTGA TTCTAATGTATTAAAAACGTTTCGTGTTCCTTTCTAACTGGATTACACCCTGGATTGAAAAAGTCTTCCTCGTGGTAGTTATATGTAGTT >In-frame_ENST00000287437_ENST00000342287_TCGA-24-1567-01A_NSMCE2_chr8_126194498_+_PBX3_chr9_128677965_length(amino acids)=431AA_start in transcript=120_stop in transcript=1415 MEEGNLSPKTEDTYLPHILSPAVFGGPGTNFKMPGRSSSNSGSTGFISFSGVESALSSLKNFQACINSGMDTASSVALDLVESQTEVSSE YSMDKAMVEFATLDRQLNHYVKAVQSTINHVKEERPEKIPDLKLLVEKKFLALQSKNSDADFQNNEKFVQFKQQLKELKKQCLSIRGAQE EDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSR TRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVS -------------------------------------------------------------- >In-frame_ENST00000287437_ENST00000373487_TCGA-24-1567-01A_NSMCE2_chr8_126194498_+_PBX3_chr9_128677965_length(transcript)=3182nt_BP=634nt GCCCGCTCTCACTTTTCAGCGGCAGGCGAAGGGGGCTGAGGAAAGGAGGTGGGTCTAGGCAGGGGAAATTGGGGTGCCACCAGACGGAGA CAGCTTGGACTACCAGAATCAAGCACTCTTTTGGAAGAGGGTAATCTCTCTCCAAAAACTGAGGACACTTACCTTCCCCATATATTGAGT CCAGCTGTGTTTGGTGGCCCAGGTACTAATTTCAAGATGCCAGGACGTTCCAGTTCAAATTCAGGTTCAACTGGTTTCATCTCCTTCAGT GGTGTAGAGTCTGCTCTCTCCTCCTTGAAAAACTTCCAAGCCTGTATCAACTCTGGTATGGACACAGCTTCTAGTGTTGCTTTGGATCTT GTGGAAAGTCAGACTGAAGTGAGTAGTGAATATAGTATGGACAAGGCAATGGTTGAATTTGCTACATTGGATCGGCAACTAAACCATTAT GTAAAGGCTGTTCAATCTACAATAAATCATGTGAAAGAAGAACGTCCAGAAAAAATACCAGATTTAAAATTATTGGTAGAGAAGAAATTT TTGGCTTTACAGAGCAAGAATTCTGATGCAGACTTTCAAAATAATGAAAAATTTGTACAGTTTAAACAACAGCTGAAAGAACTAAAGAAG CAATGTCTCAGCATCAGAGGAGCCCAGGAGGAGGACCCTCCCGATCCCCAGCTAATGAGACTGGACAATATGCTTTTGGCAGAAGGGGTT TCAGGTCCTGAGAAAGGTGGGGGATCGGCGGCAGCAGCTGCAGCCGCGGCAGCCTCTGGAGGTTCTTCAGATAACTCTATTGAACACTCA GATTACAGAGCCAAATTGACCCAGATCAGACAAATCTATCACACAGAACTGGAGAAATATGAACAGGCATGTAATGAATTTACTACACAT GTGATGAACCTTCTCCGAGAACAGAGTAGAACACGTCCCATTTCTCCAAAAGAGATTGAAAGAATGGTGGGCATCATCCATCGAAAATTT AGTTCCATTCAGATGCAGCTCAAACAAAGCACTTGTGAAGCAGTTATGATTTTAAGATCAAGGTTCCTTGATGCCAGACGGAAAAGGCGT AACTTCAGTAAACAGGCCACAGAAATCTTGAATGAATATTTTTACTCACACCTCAGCAACCCCTACCCCAGTGAAGAAGCCAAAGAGGAG CTGGCCAAGAAATGCAGCATCACAGTGTCACAGAGTCTTGTAAAGGATCCAAAAGAAAGAGGGAGCAAAGGTTCTGACATCCAGCCAACT AGCGTGGTATCCAATTGGTTTGGCAACAAACGAATCAGGTACAAGAAGAACATTGGCAAGTTTCAGGAAGAAGCCAACCTCTATGCTGCA AAGACGGCCGTGACAGCTGCACACGCAGTAGCAGCAGCTGTGCAGAACAACCAGACCAATTCGCCCACCACACCAAATTCCGGTTCTTCT GGTTCTTTTAACCTCCCAAATTCTGGGGACATGTTCATGAACATGCAGAGTCTGAATGGGGATTCTTACCAAGGGTCCCAAGTCGGAGCC AATGTGCAATCACAGGTGGATACCCTCCGTCATGTTATCAATCAGACGGGAGGCTACAGTGATGGCCTTGGAGGAAATTCACTGTACAGT CCACATAATTTAAATGCTAATGGAGGCTGGCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACAGAAGGCCCAGGAAGTGTGCAC TCGGATACCTCTAACTAATCTCTGGCCACACTTTTCCCTGAGCTACATGCCTTGATAAGTGCATTCAGAGCAATAGGAGGAAAAGGAAAG CGTTTTTGTAGCCCACCATCTACAGCTTTACTGTAAAACCTTGTCTTATTCGAGAACTTGGTAAATCTGTTTTTTAAGGAATCATAATCA TTTGTATTTATACTTAAAAACACACAATGTTAAAAAAAATAAAGCACTTTATCCAATTAGGCCAAGATTTAACATTGTTGACAGTCCTGT AGCTATTTTATCATAATTTATTATCAATATTTTACATTAATGGTTTCACAGTTGCCAATTACTTGGCCTTAAGGGTAAAAAGTACAATAT ACACTAAACCTCAACCGTTAAAGCAGATGCAAAAATTCACCTCACCTAAATTGAACTTCTTGCATATTTCCATTACTGACTTGGATTGTC TTTCTTTCATATCACTAATGGAGTTGGAATAAAGAGCTGTTTGCCTATCCCTGTTAATGATGGTTGTGTTTAAGAATCTTCCTCGTCACG TTTGTGTTCAGATCTCTTATGTTATAATTAGATCAGAGACTGGTAGCATCGTTTCTCTCTCTGAAAGCACCAGTGCCCAGAGTCTGCTCG GTAATAAAATTATGGATCCAGATTGTTCTGAGAGACGAAGATACTTGCTGCTGATAGAGGTGAAAACGAGATTGATCCGTCTGGGGTTTT ACGGTGTGCACTGGGTGCTGCACAGACTTGTCAAGGTTTGCTACGTCCTCTGGGCATCTGCAAAAGGCCCTGCTCTCTGGAGTGTTGTAT ATAGTGTAGCAAAAGAGTATTTATACATCCCACCAATCAAAACACAGCTTTATTACCTCATGCGAACTCATACAAACCAATAGAATTTCA ACATGTTCTGTAGCTTAGAGTGCTCACTTACTACCTCTGAACAATACTCACGCTGTAGTTTGTCTCTTTCTTATCTTTTTGCATCTTGTA ATTAACTCTTTGTTTCCCTTCATAAAATGTAATGTACATTGTAATCTTTTAAAAGAAAAATCAGGGTTGCACTTGCAACTTTTAAAAAAC CGAGTGTGGAAACATTGGGTCTTAATTCAACACAGGATCGGTAAAACTGTTGTAAATACTGAGAAACATTTTGAATGTTCTTCATCTTAT TACTAATCCATGCAAAAAAAAAAAAAAAAGCAGCGACTAATTGTGATGCATTCAGATTTCAGTATTCAGTACTGTATATTTCACCCTGTG TAATGGGGCCCCCTCTCCTTTCTCTCTTTTTGTATTGTATGCGATTCTGAAACTGATTGAGTCATGAAAATAATTTGTGGCGGTGATTCT AATGTATTAAAAACGTTTCGTGTTCCTTTCTAACTGGATTACACCCTGGATTGAAAAAGTCTTCCTCGTGGTAGTTATATGTAGTTTCAA >In-frame_ENST00000287437_ENST00000373487_TCGA-24-1567-01A_NSMCE2_chr8_126194498_+_PBX3_chr9_128677965_length(amino acids)=535AA_start in transcript=120_stop in transcript=1727 MEEGNLSPKTEDTYLPHILSPAVFGGPGTNFKMPGRSSSNSGSTGFISFSGVESALSSLKNFQACINSGMDTASSVALDLVESQTEVSSE YSMDKAMVEFATLDRQLNHYVKAVQSTINHVKEERPEKIPDLKLLVEKKFLALQSKNSDADFQNNEKFVQFKQQLKELKKQCLSIRGAQE EDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSR TRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVS QSLVKDPKERGSKGSDIQPTSVVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGD -------------------------------------------------------------- >In-frame_ENST00000287437_ENST00000373489_TCGA-24-1567-01A_NSMCE2_chr8_126194498_+_PBX3_chr9_128677965_length(transcript)=2846nt_BP=634nt GCCCGCTCTCACTTTTCAGCGGCAGGCGAAGGGGGCTGAGGAAAGGAGGTGGGTCTAGGCAGGGGAAATTGGGGTGCCACCAGACGGAGA CAGCTTGGACTACCAGAATCAAGCACTCTTTTGGAAGAGGGTAATCTCTCTCCAAAAACTGAGGACACTTACCTTCCCCATATATTGAGT CCAGCTGTGTTTGGTGGCCCAGGTACTAATTTCAAGATGCCAGGACGTTCCAGTTCAAATTCAGGTTCAACTGGTTTCATCTCCTTCAGT GGTGTAGAGTCTGCTCTCTCCTCCTTGAAAAACTTCCAAGCCTGTATCAACTCTGGTATGGACACAGCTTCTAGTGTTGCTTTGGATCTT GTGGAAAGTCAGACTGAAGTGAGTAGTGAATATAGTATGGACAAGGCAATGGTTGAATTTGCTACATTGGATCGGCAACTAAACCATTAT GTAAAGGCTGTTCAATCTACAATAAATCATGTGAAAGAAGAACGTCCAGAAAAAATACCAGATTTAAAATTATTGGTAGAGAAGAAATTT TTGGCTTTACAGAGCAAGAATTCTGATGCAGACTTTCAAAATAATGAAAAATTTGTACAGTTTAAACAACAGCTGAAAGAACTAAAGAAG CAATGTCTCAGCATCAGAGGAGCCCAGGAGGAGGACCCTCCCGATCCCCAGCTAATGAGACTGGACAATATGCTTTTGGCAGAAGGGGTT TCAGGTCCTGAGAAAGGTGGGGGATCGGCGGCAGCAGCTGCAGCCGCGGCAGCCTCTGGAGGTTCTTCAGATAACTCTATTGAACACTCA GATTACAGAGCCAAATTGACCCAGATCAGACAAATCTATCACACAGAACTGGAGAAATATGAACAGGCATGTAATGAATTTACTACACAT GTGATGAACCTTCTCCGAGAACAGAGTAGAACACGTCCCATTTCTCCAAAAGAGATTGAAAGAATGGTGGGCATCATCCATCGAAAATTT AGTTCCATTCAGATGCAGCTCAAACAAAGCACTTGTGAAGCAGTTATGATTTTAAGATCAAGGTTCCTTGATGCCAGACGGAAAAGGCGT AACTTCAGTAAACAGGCCACAGAAATCTTGAATGAATATTTTTACTCACACCTCAGCAACCCCTACCCCAGTGAAGAAGCCAAAGAGGAG CTGGCCAAGAAATGCAGCATCACAGTGTCACAGGTATCCAATTGGTTTGGCAACAAACGAATCAGGTACAAGAAGAACATTGGCAAGTTT CAGGAAGAAGCCAACCTCTATGCTGCAAAGACGGCCGTGACAGCTGCACACGCAGTAGCAGCAGCTGTGCAGAACAACCAGACCAATTCG CCCACCACACCAAATTCCGGTTCTTCTGGTTCTTTTAACCTCCCAAATTCTGGGGACATGTTCATGAACATGCAGAGTCTGAATGGGGAT TCTTACCAAGGGTCCCAAGTCGGAGCCAATGTGCAATCACAGGTGGATACCCTCCGTCATGTTATCAATCAGACGGGAGGCTACAGTGAT GGCCTTGGAGGAAATTCACTGTACAGTCCACATAATTTAAATGCTAATGGAGGCTGGCAGGACGCAACAACTCCATCTTCTGTGACTTCT CCTACAGAAGGCCCAGGAAGTGTGCACTCGGATACCTCTAACTAATCTCTGGCCACACTTTTCCCTGAGCTACATGCCTTGATAAGTGCA TTCAGAGCAATAGGAGGAAAAGGAAAGCGTTTTTGTAGCCCACCATCTACAGCTTTACTGTAAAACCTTGTCTTATTCGAGAACTTGGTA AATCTGTTTTTTAAGGAATCATAATCATTTGTATTTATACTTAAAAACACACAATGTTAAAAAAAATAAAGCACTTTATCCAATTAGGCC AAGATTTAACATTGTTGACAGTCCTGTAGCTATTTTATCATAATTTATTATCAATATTTTACATTAATGGTTTCACAGTTGCCAATTACT TGGCCTTAAGGGTAAAAAGTACAATATACACTAAACCTCAACCGTTAAAGCAGATGCAAAAATTCACCTCACCTAAATTGAACTTCTTGC ATATTTCCATTACTGACTTGGATTGTCTTTCTTTCATATCACTAATGGAGTTGGAATAAAGAGCTGTTTGCCTATCCCTGTTAATGATGG TTGTGTTTAAGAATCTTCCTCGTCACGTTTGTGTTCAGATCTCTTATGTTATAATTAGATCAGAGACTGGTAGCATCGTTTCTCTCTCTG AAAGCACCAGTGCCCAGAGTCTGCTCGGTAATAAAATTATGGATCCAGATTGTTCTGAGAGACGAAGATACTTGCTGCTGATAGAGGTGA AAACGAGATTGATCCGTCTGGGGTTTTACGGTGTGCACTGGGTGCTGCACAGACTTGTCAAGGTTTGCTACGTCCTCTGGGCATCTGCAA AAGGCCCTGCTCTCTGGAGTGTTGTATATAGTGTAGCAAAAGAGTATTTATACATCCCACCAATCAAAACACAGCTTTATTACCTCATGC GAACTCATACAAACCAATAGAATTTCAACATGTTCTGTAGCTTAGAGTGCTCACTTACTACCTCTGAACAATACTCACGCTGTAGTTTGT CTCTTTCTTATCTTTTTGCATCTTGTAATTAACTCTTTGTTTCCCTTCATAAAATGTAATGTACATTGTAATCTTTTAAAAGAAAAATCA GGGTTGCACTTGCAACTTTTAAAAAACCGAGTGTGGAAACATTGGGTCTTAATTCAACACAGGATCGGTAAAACTGTTGTAAATACTGAG >In-frame_ENST00000287437_ENST00000373489_TCGA-24-1567-01A_NSMCE2_chr8_126194498_+_PBX3_chr9_128677965_length(amino acids)=514AA_start in transcript=120_stop in transcript=1664 MEEGNLSPKTEDTYLPHILSPAVFGGPGTNFKMPGRSSSNSGSTGFISFSGVESALSSLKNFQACINSGMDTASSVALDLVESQTEVSSE YSMDKAMVEFATLDRQLNHYVKAVQSTINHVKEERPEKIPDLKLLVEKKFLALQSKNSDADFQNNEKFVQFKQQLKELKKQCLSIRGAQE EDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSR TRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVS QVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGAN -------------------------------------------------------------- >In-frame_ENST00000522563_ENST00000342287_TCGA-24-1567-01A_NSMCE2_chr8_126194498_+_PBX3_chr9_128677965_length(transcript)=2893nt_BP=521nt AGCGGCAGGCGAAGGGGGCTGAGGAAAGGAGGTGGGTCTAGGCAGGGGAAATTGGGGTGCCACCAGACGGAGACAGCTTGGACTACCAGG TACTAATTTCAAGATGCCAGGACGTTCCAGTTCAAATTCAGGTTCAACTGGTTTCATCTCCTTCAGTGGTGTAGAGTCTGCTCTCTCCTC CTTGAAAAACTTCCAAGCCTGTATCAACTCTGGTATGGACACAGCTTCTAGTGTTGCTTTGGATCTTGTGGAAAGTCAGACTGAAGTGAG TAGTGAATATAGTATGGACAAGGCAATGGTTGAATTTGCTACATTGGATCGGCAACTAAACCATTATGTAAAGGCTGTTCAATCTACAAT AAATCATGTGAAAGAAGAACGTCCAGAAAAAATACCAGATTTAAAATTATTGGTAGAGAAGAAATTTTTGGCTTTACAGAGCAAGAATTC TGATGCAGACTTTCAAAATAATGAAAAATTTGTACAGTTTAAACAACAGCTGAAAGAACTAAAGAAGCAATGTCTCAGCATCAGAGGAGC CCAGGAGGAGGACCCTCCCGATCCCCAGCTAATGAGACTGGACAATATGCTTTTGGCAGAAGGGGTTTCAGGTCCTGAGAAAGGTGGGGG ATCGGCGGCAGCAGCTGCAGCCGCGGCAGCCTCTGGAGGTTCTTCAGATAACTCTATTGAACACTCAGATTACAGAGCCAAATTGACCCA GATCAGACAAATCTATCACACAGAACTGGAGAAATATGAACAGGCATGTAATGAATTTACTACACATGTGATGAACCTTCTCCGAGAACA GAGTAGAACACGTCCCATTTCTCCAAAAGAGATTGAAAGAATGGTGGGCATCATCCATCGAAAATTTAGTTCCATTCAGATGCAGCTCAA ACAAAGCACTTGTGAAGCAGTTATGATTTTAAGATCAAGGTTCCTTGATGCCAGACGGAAAAGGCGTAACTTCAGTAAACAGGCCACAGA AATCTTGAATGAATATTTTTACTCACACCTCAGCAACCCCTACCCCAGTGAAGAAGCCAAAGAGGAGCTGGCCAAGAAATGCAGCATCAC AGTGTCACAGGTATCCAATTGGTTTGGCAACAAACGAATCAGGTACAAGAAGAACATTGGCAAGTTTCAGGAAGAAGCCAACCTCTATGC TGCAAAGACGGCCGTGACAGCTGCACACGCAGTAGCAGCAGCTGTGCAGAACAACCAGACCAATTCGCCCACCACACCAAATTCCGGTGG ATACCCTCCGTCATGTTATCAATCAGACGGGAGGCTACAGTGATGGCCTTGGAGGAAATTCACTGTACAGTCCACATAATTTAAATGCTA ATGGAGGCTGGCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACAGAAGGCCCAGGAAGTGTGCACTCGGATACCTCTAACTAAT CTCTGGCCACACTTTTCCCTGAGCTACATGCCTTGATAAGTGCATTCAGAGCAATAGGAGGAAAAGGAAAGCGTTTTTGTAGCCCACCAT CTACAGCTTTACTGTAAAACCTTGTCTTATTCGAGAACTTGGTAAATCTGTTTTTTAAGGAATCATAATCATTTGTATTTATACTTAAAA ACACACAATGTTAAAAAAAATAAAGCACTTTATCCAATTAGGCCAAGATTTAACATTGTTGACAGTCCTGTAGCTATTTTATCATAATTT ATTATCAATATTTTACATTAATGGTTTCACAGTTGCCAATTACTTGGCCTTAAGGGTAAAAAGTACAATATACACTAAACCTCAACCGTT AAAGCAGATGCAAAAATTCACCTCACCTAAATTGAACTTCTTGCATATTTCCATTACTGACTTGGATTGTCTTTCTTTCATATCACTAAT GGAGTTGGAATAAAGAGCTGTTTGCCTATCCCTGTTAATGATGGTTGTGTTTAAGAATCTTCCTCGTCACGTTTGTGTTCAGATCTCTTA TGTTATAATTAGATCAGAGACTGGTAGCATCGTTTCTCTCTCTGAAAGCACCAGTGCCCAGAGTCTGCTCGGTAATAAAATTATGGATCC AGATTGTTCTGAGAGACGAAGATACTTGCTGCTGATAGAGGTGAAAACGAGATTGATCCGTCTGGGGTTTTACGGTGTGCACTGGGTGCT GCACAGACTTGTCAAGGTTTGCTACGTCCTCTGGGCATCTGCAAAAGGCCCTGCTCTCTGGAGTGTTGTATATAGTGTAGCAAAAGAGTA TTTATACATCCCACCAATCAAAACACAGCTTTATTACCTCATGCGAACTCATACAAACCAATAGAATTTCAACATGTTCTGTAGCTTAGA GTGCTCACTTACTACCTCTGAACAATACTCACGCTGTAGTTTGTCTCTTTCTTATCTTTTTGCATCTTGTAATTAACTCTTTGTTTCCCT TCATAAAATGTAATGTACATTGTAATCTTTTAAAAGAAAAATCAGGGTTGCACTTGCAACTTTTAAAAAACCGAGTGTGGAAACATTGGG TCTTAATTCAACACAGGATCGGTAAAACTGTTGTAAATACTGAGAAACATTTTGAATGTTCTTCATCTTATTACTAATCCATGCAAAAAA AAAAAAAAAAGCAGCGACTAATTGTGATGCATTCAGATTTCAGTATTCAGTACTGTATATTTCACCCTGTGTAATGGGGCCCCCTCTCCT TTCTCTCTTTTTGTATTGTATGCGATTCTGAAACTGATTGAGTCATGAAAATAATTTGTGGCGGTGATTCTAATGTATTAAAAACGTTTC GTGTTCCTTTCTAACTGGATTACACCCTGGATTGAAAAAGTCTTCCTCGTGGTAGTTATATGTAGTTTCAAACATGAATAAACTTTTTGC >In-frame_ENST00000522563_ENST00000342287_TCGA-24-1567-01A_NSMCE2_chr8_126194498_+_PBX3_chr9_128677965_length(amino acids)=399AA_start in transcript=103_stop in transcript=1302 MPGRSSSNSGSTGFISFSGVESALSSLKNFQACINSGMDTASSVALDLVESQTEVSSEYSMDKAMVEFATLDRQLNHYVKAVQSTINHVK EERPEKIPDLKLLVEKKFLALQSKNSDADFQNNEKFVQFKQQLKELKKQCLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAA AAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTC EAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTA -------------------------------------------------------------- >In-frame_ENST00000522563_ENST00000373487_TCGA-24-1567-01A_NSMCE2_chr8_126194498_+_PBX3_chr9_128677965_length(transcript)=3069nt_BP=521nt AGCGGCAGGCGAAGGGGGCTGAGGAAAGGAGGTGGGTCTAGGCAGGGGAAATTGGGGTGCCACCAGACGGAGACAGCTTGGACTACCAGG TACTAATTTCAAGATGCCAGGACGTTCCAGTTCAAATTCAGGTTCAACTGGTTTCATCTCCTTCAGTGGTGTAGAGTCTGCTCTCTCCTC CTTGAAAAACTTCCAAGCCTGTATCAACTCTGGTATGGACACAGCTTCTAGTGTTGCTTTGGATCTTGTGGAAAGTCAGACTGAAGTGAG TAGTGAATATAGTATGGACAAGGCAATGGTTGAATTTGCTACATTGGATCGGCAACTAAACCATTATGTAAAGGCTGTTCAATCTACAAT AAATCATGTGAAAGAAGAACGTCCAGAAAAAATACCAGATTTAAAATTATTGGTAGAGAAGAAATTTTTGGCTTTACAGAGCAAGAATTC TGATGCAGACTTTCAAAATAATGAAAAATTTGTACAGTTTAAACAACAGCTGAAAGAACTAAAGAAGCAATGTCTCAGCATCAGAGGAGC CCAGGAGGAGGACCCTCCCGATCCCCAGCTAATGAGACTGGACAATATGCTTTTGGCAGAAGGGGTTTCAGGTCCTGAGAAAGGTGGGGG ATCGGCGGCAGCAGCTGCAGCCGCGGCAGCCTCTGGAGGTTCTTCAGATAACTCTATTGAACACTCAGATTACAGAGCCAAATTGACCCA GATCAGACAAATCTATCACACAGAACTGGAGAAATATGAACAGGCATGTAATGAATTTACTACACATGTGATGAACCTTCTCCGAGAACA GAGTAGAACACGTCCCATTTCTCCAAAAGAGATTGAAAGAATGGTGGGCATCATCCATCGAAAATTTAGTTCCATTCAGATGCAGCTCAA ACAAAGCACTTGTGAAGCAGTTATGATTTTAAGATCAAGGTTCCTTGATGCCAGACGGAAAAGGCGTAACTTCAGTAAACAGGCCACAGA AATCTTGAATGAATATTTTTACTCACACCTCAGCAACCCCTACCCCAGTGAAGAAGCCAAAGAGGAGCTGGCCAAGAAATGCAGCATCAC AGTGTCACAGAGTCTTGTAAAGGATCCAAAAGAAAGAGGGAGCAAAGGTTCTGACATCCAGCCAACTAGCGTGGTATCCAATTGGTTTGG CAACAAACGAATCAGGTACAAGAAGAACATTGGCAAGTTTCAGGAAGAAGCCAACCTCTATGCTGCAAAGACGGCCGTGACAGCTGCACA CGCAGTAGCAGCAGCTGTGCAGAACAACCAGACCAATTCGCCCACCACACCAAATTCCGGTTCTTCTGGTTCTTTTAACCTCCCAAATTC TGGGGACATGTTCATGAACATGCAGAGTCTGAATGGGGATTCTTACCAAGGGTCCCAAGTCGGAGCCAATGTGCAATCACAGGTGGATAC CCTCCGTCATGTTATCAATCAGACGGGAGGCTACAGTGATGGCCTTGGAGGAAATTCACTGTACAGTCCACATAATTTAAATGCTAATGG AGGCTGGCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACAGAAGGCCCAGGAAGTGTGCACTCGGATACCTCTAACTAATCTCT GGCCACACTTTTCCCTGAGCTACATGCCTTGATAAGTGCATTCAGAGCAATAGGAGGAAAAGGAAAGCGTTTTTGTAGCCCACCATCTAC AGCTTTACTGTAAAACCTTGTCTTATTCGAGAACTTGGTAAATCTGTTTTTTAAGGAATCATAATCATTTGTATTTATACTTAAAAACAC ACAATGTTAAAAAAAATAAAGCACTTTATCCAATTAGGCCAAGATTTAACATTGTTGACAGTCCTGTAGCTATTTTATCATAATTTATTA TCAATATTTTACATTAATGGTTTCACAGTTGCCAATTACTTGGCCTTAAGGGTAAAAAGTACAATATACACTAAACCTCAACCGTTAAAG CAGATGCAAAAATTCACCTCACCTAAATTGAACTTCTTGCATATTTCCATTACTGACTTGGATTGTCTTTCTTTCATATCACTAATGGAG TTGGAATAAAGAGCTGTTTGCCTATCCCTGTTAATGATGGTTGTGTTTAAGAATCTTCCTCGTCACGTTTGTGTTCAGATCTCTTATGTT ATAATTAGATCAGAGACTGGTAGCATCGTTTCTCTCTCTGAAAGCACCAGTGCCCAGAGTCTGCTCGGTAATAAAATTATGGATCCAGAT TGTTCTGAGAGACGAAGATACTTGCTGCTGATAGAGGTGAAAACGAGATTGATCCGTCTGGGGTTTTACGGTGTGCACTGGGTGCTGCAC AGACTTGTCAAGGTTTGCTACGTCCTCTGGGCATCTGCAAAAGGCCCTGCTCTCTGGAGTGTTGTATATAGTGTAGCAAAAGAGTATTTA TACATCCCACCAATCAAAACACAGCTTTATTACCTCATGCGAACTCATACAAACCAATAGAATTTCAACATGTTCTGTAGCTTAGAGTGC TCACTTACTACCTCTGAACAATACTCACGCTGTAGTTTGTCTCTTTCTTATCTTTTTGCATCTTGTAATTAACTCTTTGTTTCCCTTCAT AAAATGTAATGTACATTGTAATCTTTTAAAAGAAAAATCAGGGTTGCACTTGCAACTTTTAAAAAACCGAGTGTGGAAACATTGGGTCTT AATTCAACACAGGATCGGTAAAACTGTTGTAAATACTGAGAAACATTTTGAATGTTCTTCATCTTATTACTAATCCATGCAAAAAAAAAA AAAAAAGCAGCGACTAATTGTGATGCATTCAGATTTCAGTATTCAGTACTGTATATTTCACCCTGTGTAATGGGGCCCCCTCTCCTTTCT CTCTTTTTGTATTGTATGCGATTCTGAAACTGATTGAGTCATGAAAATAATTTGTGGCGGTGATTCTAATGTATTAAAAACGTTTCGTGT TCCTTTCTAACTGGATTACACCCTGGATTGAAAAAGTCTTCCTCGTGGTAGTTATATGTAGTTTCAAACATGAATAAACTTTTTGCTTTC >In-frame_ENST00000522563_ENST00000373487_TCGA-24-1567-01A_NSMCE2_chr8_126194498_+_PBX3_chr9_128677965_length(amino acids)=503AA_start in transcript=103_stop in transcript=1614 MPGRSSSNSGSTGFISFSGVESALSSLKNFQACINSGMDTASSVALDLVESQTEVSSEYSMDKAMVEFATLDRQLNHYVKAVQSTINHVK EERPEKIPDLKLLVEKKFLALQSKNSDADFQNNEKFVQFKQQLKELKKQCLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAA AAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTC EAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQSLVKDPKERGSKGSDIQPTSVVSNWFGNKRI RYKKNIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQSQVDTLRHV -------------------------------------------------------------- >In-frame_ENST00000522563_ENST00000373489_TCGA-24-1567-01A_NSMCE2_chr8_126194498_+_PBX3_chr9_128677965_length(transcript)=2733nt_BP=521nt AGCGGCAGGCGAAGGGGGCTGAGGAAAGGAGGTGGGTCTAGGCAGGGGAAATTGGGGTGCCACCAGACGGAGACAGCTTGGACTACCAGG TACTAATTTCAAGATGCCAGGACGTTCCAGTTCAAATTCAGGTTCAACTGGTTTCATCTCCTTCAGTGGTGTAGAGTCTGCTCTCTCCTC CTTGAAAAACTTCCAAGCCTGTATCAACTCTGGTATGGACACAGCTTCTAGTGTTGCTTTGGATCTTGTGGAAAGTCAGACTGAAGTGAG TAGTGAATATAGTATGGACAAGGCAATGGTTGAATTTGCTACATTGGATCGGCAACTAAACCATTATGTAAAGGCTGTTCAATCTACAAT AAATCATGTGAAAGAAGAACGTCCAGAAAAAATACCAGATTTAAAATTATTGGTAGAGAAGAAATTTTTGGCTTTACAGAGCAAGAATTC TGATGCAGACTTTCAAAATAATGAAAAATTTGTACAGTTTAAACAACAGCTGAAAGAACTAAAGAAGCAATGTCTCAGCATCAGAGGAGC CCAGGAGGAGGACCCTCCCGATCCCCAGCTAATGAGACTGGACAATATGCTTTTGGCAGAAGGGGTTTCAGGTCCTGAGAAAGGTGGGGG ATCGGCGGCAGCAGCTGCAGCCGCGGCAGCCTCTGGAGGTTCTTCAGATAACTCTATTGAACACTCAGATTACAGAGCCAAATTGACCCA GATCAGACAAATCTATCACACAGAACTGGAGAAATATGAACAGGCATGTAATGAATTTACTACACATGTGATGAACCTTCTCCGAGAACA GAGTAGAACACGTCCCATTTCTCCAAAAGAGATTGAAAGAATGGTGGGCATCATCCATCGAAAATTTAGTTCCATTCAGATGCAGCTCAA ACAAAGCACTTGTGAAGCAGTTATGATTTTAAGATCAAGGTTCCTTGATGCCAGACGGAAAAGGCGTAACTTCAGTAAACAGGCCACAGA AATCTTGAATGAATATTTTTACTCACACCTCAGCAACCCCTACCCCAGTGAAGAAGCCAAAGAGGAGCTGGCCAAGAAATGCAGCATCAC AGTGTCACAGGTATCCAATTGGTTTGGCAACAAACGAATCAGGTACAAGAAGAACATTGGCAAGTTTCAGGAAGAAGCCAACCTCTATGC TGCAAAGACGGCCGTGACAGCTGCACACGCAGTAGCAGCAGCTGTGCAGAACAACCAGACCAATTCGCCCACCACACCAAATTCCGGTTC TTCTGGTTCTTTTAACCTCCCAAATTCTGGGGACATGTTCATGAACATGCAGAGTCTGAATGGGGATTCTTACCAAGGGTCCCAAGTCGG AGCCAATGTGCAATCACAGGTGGATACCCTCCGTCATGTTATCAATCAGACGGGAGGCTACAGTGATGGCCTTGGAGGAAATTCACTGTA CAGTCCACATAATTTAAATGCTAATGGAGGCTGGCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACAGAAGGCCCAGGAAGTGT GCACTCGGATACCTCTAACTAATCTCTGGCCACACTTTTCCCTGAGCTACATGCCTTGATAAGTGCATTCAGAGCAATAGGAGGAAAAGG AAAGCGTTTTTGTAGCCCACCATCTACAGCTTTACTGTAAAACCTTGTCTTATTCGAGAACTTGGTAAATCTGTTTTTTAAGGAATCATA ATCATTTGTATTTATACTTAAAAACACACAATGTTAAAAAAAATAAAGCACTTTATCCAATTAGGCCAAGATTTAACATTGTTGACAGTC CTGTAGCTATTTTATCATAATTTATTATCAATATTTTACATTAATGGTTTCACAGTTGCCAATTACTTGGCCTTAAGGGTAAAAAGTACA ATATACACTAAACCTCAACCGTTAAAGCAGATGCAAAAATTCACCTCACCTAAATTGAACTTCTTGCATATTTCCATTACTGACTTGGAT TGTCTTTCTTTCATATCACTAATGGAGTTGGAATAAAGAGCTGTTTGCCTATCCCTGTTAATGATGGTTGTGTTTAAGAATCTTCCTCGT CACGTTTGTGTTCAGATCTCTTATGTTATAATTAGATCAGAGACTGGTAGCATCGTTTCTCTCTCTGAAAGCACCAGTGCCCAGAGTCTG CTCGGTAATAAAATTATGGATCCAGATTGTTCTGAGAGACGAAGATACTTGCTGCTGATAGAGGTGAAAACGAGATTGATCCGTCTGGGG TTTTACGGTGTGCACTGGGTGCTGCACAGACTTGTCAAGGTTTGCTACGTCCTCTGGGCATCTGCAAAAGGCCCTGCTCTCTGGAGTGTT GTATATAGTGTAGCAAAAGAGTATTTATACATCCCACCAATCAAAACACAGCTTTATTACCTCATGCGAACTCATACAAACCAATAGAAT TTCAACATGTTCTGTAGCTTAGAGTGCTCACTTACTACCTCTGAACAATACTCACGCTGTAGTTTGTCTCTTTCTTATCTTTTTGCATCT TGTAATTAACTCTTTGTTTCCCTTCATAAAATGTAATGTACATTGTAATCTTTTAAAAGAAAAATCAGGGTTGCACTTGCAACTTTTAAA AAACCGAGTGTGGAAACATTGGGTCTTAATTCAACACAGGATCGGTAAAACTGTTGTAAATACTGAGAAACATTTTGAATGTTCTTCATC >In-frame_ENST00000522563_ENST00000373489_TCGA-24-1567-01A_NSMCE2_chr8_126194498_+_PBX3_chr9_128677965_length(amino acids)=482AA_start in transcript=103_stop in transcript=1551 MPGRSSSNSGSTGFISFSGVESALSSLKNFQACINSGMDTASSVALDLVESQTEVSSEYSMDKAMVEFATLDRQLNHYVKAVQSTINHVK EERPEKIPDLKLLVEKKFLALQSKNSDADFQNNEKFVQFKQQLKELKKQCLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAA AAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTC EAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTA VTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQSQVDTLRHVINQTGGYSDGLGGNSLYSPHN -------------------------------------------------------------- >In-frame_ENST00000517315_ENST00000342287_TCGA-24-1567-01A_NSMCE2_chr8_126194498_+_PBX3_chr9_128677965_length(transcript)=2809nt_BP=437nt TAATATGTGGTCTTTTGTGACTGGCTGTTTTCTTAGCATAAGGTTTTCAAGGTTCATCCATGTTGCATGTATCAGTGAGAGAGGTGGATG CTTTGGAGCTTTTGGCTCAGAAATGATAATGTACATAACACAGGCAGCCATGAGTTAAAATGCAAGTTCTGCTATCTGCTAGCTCTCTGA AGTGAGTAGTGAATATAGTATGGACAAGGCAATGGTTGAATTTGCTACATTGGATCGGCAACTAAACCATTATGTAAAGGCTGTTCAATC TACAATAAATCATGTGAAAGAAGAACGTCCAGAAAAAATACCAGATTTAAAATTATTGGTAGAGAAGAAATTTTTGGCTTTACAGAGCAA GAATTCTGATGCAGACTTTCAAAATAATGAAAAATTTGTACAGTTTAAACAACAGCTGAAAGAACTAAAGAAGCAATGTCTCAGCATCAG AGGAGCCCAGGAGGAGGACCCTCCCGATCCCCAGCTAATGAGACTGGACAATATGCTTTTGGCAGAAGGGGTTTCAGGTCCTGAGAAAGG TGGGGGATCGGCGGCAGCAGCTGCAGCCGCGGCAGCCTCTGGAGGTTCTTCAGATAACTCTATTGAACACTCAGATTACAGAGCCAAATT GACCCAGATCAGACAAATCTATCACACAGAACTGGAGAAATATGAACAGGCATGTAATGAATTTACTACACATGTGATGAACCTTCTCCG AGAACAGAGTAGAACACGTCCCATTTCTCCAAAAGAGATTGAAAGAATGGTGGGCATCATCCATCGAAAATTTAGTTCCATTCAGATGCA GCTCAAACAAAGCACTTGTGAAGCAGTTATGATTTTAAGATCAAGGTTCCTTGATGCCAGACGGAAAAGGCGTAACTTCAGTAAACAGGC CACAGAAATCTTGAATGAATATTTTTACTCACACCTCAGCAACCCCTACCCCAGTGAAGAAGCCAAAGAGGAGCTGGCCAAGAAATGCAG CATCACAGTGTCACAGGTATCCAATTGGTTTGGCAACAAACGAATCAGGTACAAGAAGAACATTGGCAAGTTTCAGGAAGAAGCCAACCT CTATGCTGCAAAGACGGCCGTGACAGCTGCACACGCAGTAGCAGCAGCTGTGCAGAACAACCAGACCAATTCGCCCACCACACCAAATTC CGGTGGATACCCTCCGTCATGTTATCAATCAGACGGGAGGCTACAGTGATGGCCTTGGAGGAAATTCACTGTACAGTCCACATAATTTAA ATGCTAATGGAGGCTGGCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACAGAAGGCCCAGGAAGTGTGCACTCGGATACCTCTA ACTAATCTCTGGCCACACTTTTCCCTGAGCTACATGCCTTGATAAGTGCATTCAGAGCAATAGGAGGAAAAGGAAAGCGTTTTTGTAGCC CACCATCTACAGCTTTACTGTAAAACCTTGTCTTATTCGAGAACTTGGTAAATCTGTTTTTTAAGGAATCATAATCATTTGTATTTATAC TTAAAAACACACAATGTTAAAAAAAATAAAGCACTTTATCCAATTAGGCCAAGATTTAACATTGTTGACAGTCCTGTAGCTATTTTATCA TAATTTATTATCAATATTTTACATTAATGGTTTCACAGTTGCCAATTACTTGGCCTTAAGGGTAAAAAGTACAATATACACTAAACCTCA ACCGTTAAAGCAGATGCAAAAATTCACCTCACCTAAATTGAACTTCTTGCATATTTCCATTACTGACTTGGATTGTCTTTCTTTCATATC ACTAATGGAGTTGGAATAAAGAGCTGTTTGCCTATCCCTGTTAATGATGGTTGTGTTTAAGAATCTTCCTCGTCACGTTTGTGTTCAGAT CTCTTATGTTATAATTAGATCAGAGACTGGTAGCATCGTTTCTCTCTCTGAAAGCACCAGTGCCCAGAGTCTGCTCGGTAATAAAATTAT GGATCCAGATTGTTCTGAGAGACGAAGATACTTGCTGCTGATAGAGGTGAAAACGAGATTGATCCGTCTGGGGTTTTACGGTGTGCACTG GGTGCTGCACAGACTTGTCAAGGTTTGCTACGTCCTCTGGGCATCTGCAAAAGGCCCTGCTCTCTGGAGTGTTGTATATAGTGTAGCAAA AGAGTATTTATACATCCCACCAATCAAAACACAGCTTTATTACCTCATGCGAACTCATACAAACCAATAGAATTTCAACATGTTCTGTAG CTTAGAGTGCTCACTTACTACCTCTGAACAATACTCACGCTGTAGTTTGTCTCTTTCTTATCTTTTTGCATCTTGTAATTAACTCTTTGT TTCCCTTCATAAAATGTAATGTACATTGTAATCTTTTAAAAGAAAAATCAGGGTTGCACTTGCAACTTTTAAAAAACCGAGTGTGGAAAC ATTGGGTCTTAATTCAACACAGGATCGGTAAAACTGTTGTAAATACTGAGAAACATTTTGAATGTTCTTCATCTTATTACTAATCCATGC AAAAAAAAAAAAAAAAGCAGCGACTAATTGTGATGCATTCAGATTTCAGTATTCAGTACTGTATATTTCACCCTGTGTAATGGGGCCCCC TCTCCTTTCTCTCTTTTTGTATTGTATGCGATTCTGAAACTGATTGAGTCATGAAAATAATTTGTGGCGGTGATTCTAATGTATTAAAAA CGTTTCGTGTTCCTTTCTAACTGGATTACACCCTGGATTGAAAAAGTCTTCCTCGTGGTAGTTATATGTAGTTTCAAACATGAATAAACT >In-frame_ENST00000517315_ENST00000342287_TCGA-24-1567-01A_NSMCE2_chr8_126194498_+_PBX3_chr9_128677965_length(amino acids)=339AA_start in transcript=199_stop in transcript=1218 MDKAMVEFATLDRQLNHYVKAVQSTINHVKEERPEKIPDLKLLVEKKFLALQSKNSDADFQNNEKFVQFKQQLKELKKQCLSIRGAQEED PPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTR PISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQV -------------------------------------------------------------- >In-frame_ENST00000517315_ENST00000373487_TCGA-24-1567-01A_NSMCE2_chr8_126194498_+_PBX3_chr9_128677965_length(transcript)=2985nt_BP=437nt TAATATGTGGTCTTTTGTGACTGGCTGTTTTCTTAGCATAAGGTTTTCAAGGTTCATCCATGTTGCATGTATCAGTGAGAGAGGTGGATG CTTTGGAGCTTTTGGCTCAGAAATGATAATGTACATAACACAGGCAGCCATGAGTTAAAATGCAAGTTCTGCTATCTGCTAGCTCTCTGA AGTGAGTAGTGAATATAGTATGGACAAGGCAATGGTTGAATTTGCTACATTGGATCGGCAACTAAACCATTATGTAAAGGCTGTTCAATC TACAATAAATCATGTGAAAGAAGAACGTCCAGAAAAAATACCAGATTTAAAATTATTGGTAGAGAAGAAATTTTTGGCTTTACAGAGCAA GAATTCTGATGCAGACTTTCAAAATAATGAAAAATTTGTACAGTTTAAACAACAGCTGAAAGAACTAAAGAAGCAATGTCTCAGCATCAG AGGAGCCCAGGAGGAGGACCCTCCCGATCCCCAGCTAATGAGACTGGACAATATGCTTTTGGCAGAAGGGGTTTCAGGTCCTGAGAAAGG TGGGGGATCGGCGGCAGCAGCTGCAGCCGCGGCAGCCTCTGGAGGTTCTTCAGATAACTCTATTGAACACTCAGATTACAGAGCCAAATT GACCCAGATCAGACAAATCTATCACACAGAACTGGAGAAATATGAACAGGCATGTAATGAATTTACTACACATGTGATGAACCTTCTCCG AGAACAGAGTAGAACACGTCCCATTTCTCCAAAAGAGATTGAAAGAATGGTGGGCATCATCCATCGAAAATTTAGTTCCATTCAGATGCA GCTCAAACAAAGCACTTGTGAAGCAGTTATGATTTTAAGATCAAGGTTCCTTGATGCCAGACGGAAAAGGCGTAACTTCAGTAAACAGGC CACAGAAATCTTGAATGAATATTTTTACTCACACCTCAGCAACCCCTACCCCAGTGAAGAAGCCAAAGAGGAGCTGGCCAAGAAATGCAG CATCACAGTGTCACAGAGTCTTGTAAAGGATCCAAAAGAAAGAGGGAGCAAAGGTTCTGACATCCAGCCAACTAGCGTGGTATCCAATTG GTTTGGCAACAAACGAATCAGGTACAAGAAGAACATTGGCAAGTTTCAGGAAGAAGCCAACCTCTATGCTGCAAAGACGGCCGTGACAGC TGCACACGCAGTAGCAGCAGCTGTGCAGAACAACCAGACCAATTCGCCCACCACACCAAATTCCGGTTCTTCTGGTTCTTTTAACCTCCC AAATTCTGGGGACATGTTCATGAACATGCAGAGTCTGAATGGGGATTCTTACCAAGGGTCCCAAGTCGGAGCCAATGTGCAATCACAGGT GGATACCCTCCGTCATGTTATCAATCAGACGGGAGGCTACAGTGATGGCCTTGGAGGAAATTCACTGTACAGTCCACATAATTTAAATGC TAATGGAGGCTGGCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACAGAAGGCCCAGGAAGTGTGCACTCGGATACCTCTAACTA ATCTCTGGCCACACTTTTCCCTGAGCTACATGCCTTGATAAGTGCATTCAGAGCAATAGGAGGAAAAGGAAAGCGTTTTTGTAGCCCACC ATCTACAGCTTTACTGTAAAACCTTGTCTTATTCGAGAACTTGGTAAATCTGTTTTTTAAGGAATCATAATCATTTGTATTTATACTTAA AAACACACAATGTTAAAAAAAATAAAGCACTTTATCCAATTAGGCCAAGATTTAACATTGTTGACAGTCCTGTAGCTATTTTATCATAAT TTATTATCAATATTTTACATTAATGGTTTCACAGTTGCCAATTACTTGGCCTTAAGGGTAAAAAGTACAATATACACTAAACCTCAACCG TTAAAGCAGATGCAAAAATTCACCTCACCTAAATTGAACTTCTTGCATATTTCCATTACTGACTTGGATTGTCTTTCTTTCATATCACTA ATGGAGTTGGAATAAAGAGCTGTTTGCCTATCCCTGTTAATGATGGTTGTGTTTAAGAATCTTCCTCGTCACGTTTGTGTTCAGATCTCT TATGTTATAATTAGATCAGAGACTGGTAGCATCGTTTCTCTCTCTGAAAGCACCAGTGCCCAGAGTCTGCTCGGTAATAAAATTATGGAT CCAGATTGTTCTGAGAGACGAAGATACTTGCTGCTGATAGAGGTGAAAACGAGATTGATCCGTCTGGGGTTTTACGGTGTGCACTGGGTG CTGCACAGACTTGTCAAGGTTTGCTACGTCCTCTGGGCATCTGCAAAAGGCCCTGCTCTCTGGAGTGTTGTATATAGTGTAGCAAAAGAG TATTTATACATCCCACCAATCAAAACACAGCTTTATTACCTCATGCGAACTCATACAAACCAATAGAATTTCAACATGTTCTGTAGCTTA GAGTGCTCACTTACTACCTCTGAACAATACTCACGCTGTAGTTTGTCTCTTTCTTATCTTTTTGCATCTTGTAATTAACTCTTTGTTTCC CTTCATAAAATGTAATGTACATTGTAATCTTTTAAAAGAAAAATCAGGGTTGCACTTGCAACTTTTAAAAAACCGAGTGTGGAAACATTG GGTCTTAATTCAACACAGGATCGGTAAAACTGTTGTAAATACTGAGAAACATTTTGAATGTTCTTCATCTTATTACTAATCCATGCAAAA AAAAAAAAAAAAGCAGCGACTAATTGTGATGCATTCAGATTTCAGTATTCAGTACTGTATATTTCACCCTGTGTAATGGGGCCCCCTCTC CTTTCTCTCTTTTTGTATTGTATGCGATTCTGAAACTGATTGAGTCATGAAAATAATTTGTGGCGGTGATTCTAATGTATTAAAAACGTT TCGTGTTCCTTTCTAACTGGATTACACCCTGGATTGAAAAAGTCTTCCTCGTGGTAGTTATATGTAGTTTCAAACATGAATAAACTTTTT >In-frame_ENST00000517315_ENST00000373487_TCGA-24-1567-01A_NSMCE2_chr8_126194498_+_PBX3_chr9_128677965_length(amino acids)=443AA_start in transcript=199_stop in transcript=1530 MDKAMVEFATLDRQLNHYVKAVQSTINHVKEERPEKIPDLKLLVEKKFLALQSKNSDADFQNNEKFVQFKQQLKELKKQCLSIRGAQEED PPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTR PISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQS LVKDPKERGSKGSDIQPTSVVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMF -------------------------------------------------------------- >In-frame_ENST00000517315_ENST00000373489_TCGA-24-1567-01A_NSMCE2_chr8_126194498_+_PBX3_chr9_128677965_length(transcript)=2649nt_BP=437nt TAATATGTGGTCTTTTGTGACTGGCTGTTTTCTTAGCATAAGGTTTTCAAGGTTCATCCATGTTGCATGTATCAGTGAGAGAGGTGGATG CTTTGGAGCTTTTGGCTCAGAAATGATAATGTACATAACACAGGCAGCCATGAGTTAAAATGCAAGTTCTGCTATCTGCTAGCTCTCTGA AGTGAGTAGTGAATATAGTATGGACAAGGCAATGGTTGAATTTGCTACATTGGATCGGCAACTAAACCATTATGTAAAGGCTGTTCAATC TACAATAAATCATGTGAAAGAAGAACGTCCAGAAAAAATACCAGATTTAAAATTATTGGTAGAGAAGAAATTTTTGGCTTTACAGAGCAA GAATTCTGATGCAGACTTTCAAAATAATGAAAAATTTGTACAGTTTAAACAACAGCTGAAAGAACTAAAGAAGCAATGTCTCAGCATCAG AGGAGCCCAGGAGGAGGACCCTCCCGATCCCCAGCTAATGAGACTGGACAATATGCTTTTGGCAGAAGGGGTTTCAGGTCCTGAGAAAGG TGGGGGATCGGCGGCAGCAGCTGCAGCCGCGGCAGCCTCTGGAGGTTCTTCAGATAACTCTATTGAACACTCAGATTACAGAGCCAAATT GACCCAGATCAGACAAATCTATCACACAGAACTGGAGAAATATGAACAGGCATGTAATGAATTTACTACACATGTGATGAACCTTCTCCG AGAACAGAGTAGAACACGTCCCATTTCTCCAAAAGAGATTGAAAGAATGGTGGGCATCATCCATCGAAAATTTAGTTCCATTCAGATGCA GCTCAAACAAAGCACTTGTGAAGCAGTTATGATTTTAAGATCAAGGTTCCTTGATGCCAGACGGAAAAGGCGTAACTTCAGTAAACAGGC CACAGAAATCTTGAATGAATATTTTTACTCACACCTCAGCAACCCCTACCCCAGTGAAGAAGCCAAAGAGGAGCTGGCCAAGAAATGCAG CATCACAGTGTCACAGGTATCCAATTGGTTTGGCAACAAACGAATCAGGTACAAGAAGAACATTGGCAAGTTTCAGGAAGAAGCCAACCT CTATGCTGCAAAGACGGCCGTGACAGCTGCACACGCAGTAGCAGCAGCTGTGCAGAACAACCAGACCAATTCGCCCACCACACCAAATTC CGGTTCTTCTGGTTCTTTTAACCTCCCAAATTCTGGGGACATGTTCATGAACATGCAGAGTCTGAATGGGGATTCTTACCAAGGGTCCCA AGTCGGAGCCAATGTGCAATCACAGGTGGATACCCTCCGTCATGTTATCAATCAGACGGGAGGCTACAGTGATGGCCTTGGAGGAAATTC ACTGTACAGTCCACATAATTTAAATGCTAATGGAGGCTGGCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACAGAAGGCCCAGG AAGTGTGCACTCGGATACCTCTAACTAATCTCTGGCCACACTTTTCCCTGAGCTACATGCCTTGATAAGTGCATTCAGAGCAATAGGAGG AAAAGGAAAGCGTTTTTGTAGCCCACCATCTACAGCTTTACTGTAAAACCTTGTCTTATTCGAGAACTTGGTAAATCTGTTTTTTAAGGA ATCATAATCATTTGTATTTATACTTAAAAACACACAATGTTAAAAAAAATAAAGCACTTTATCCAATTAGGCCAAGATTTAACATTGTTG ACAGTCCTGTAGCTATTTTATCATAATTTATTATCAATATTTTACATTAATGGTTTCACAGTTGCCAATTACTTGGCCTTAAGGGTAAAA AGTACAATATACACTAAACCTCAACCGTTAAAGCAGATGCAAAAATTCACCTCACCTAAATTGAACTTCTTGCATATTTCCATTACTGAC TTGGATTGTCTTTCTTTCATATCACTAATGGAGTTGGAATAAAGAGCTGTTTGCCTATCCCTGTTAATGATGGTTGTGTTTAAGAATCTT CCTCGTCACGTTTGTGTTCAGATCTCTTATGTTATAATTAGATCAGAGACTGGTAGCATCGTTTCTCTCTCTGAAAGCACCAGTGCCCAG AGTCTGCTCGGTAATAAAATTATGGATCCAGATTGTTCTGAGAGACGAAGATACTTGCTGCTGATAGAGGTGAAAACGAGATTGATCCGT CTGGGGTTTTACGGTGTGCACTGGGTGCTGCACAGACTTGTCAAGGTTTGCTACGTCCTCTGGGCATCTGCAAAAGGCCCTGCTCTCTGG AGTGTTGTATATAGTGTAGCAAAAGAGTATTTATACATCCCACCAATCAAAACACAGCTTTATTACCTCATGCGAACTCATACAAACCAA TAGAATTTCAACATGTTCTGTAGCTTAGAGTGCTCACTTACTACCTCTGAACAATACTCACGCTGTAGTTTGTCTCTTTCTTATCTTTTT GCATCTTGTAATTAACTCTTTGTTTCCCTTCATAAAATGTAATGTACATTGTAATCTTTTAAAAGAAAAATCAGGGTTGCACTTGCAACT TTTAAAAAACCGAGTGTGGAAACATTGGGTCTTAATTCAACACAGGATCGGTAAAACTGTTGTAAATACTGAGAAACATTTTGAATGTTC >In-frame_ENST00000517315_ENST00000373489_TCGA-24-1567-01A_NSMCE2_chr8_126194498_+_PBX3_chr9_128677965_length(amino acids)=422AA_start in transcript=199_stop in transcript=1467 MDKAMVEFATLDRQLNHYVKAVQSTINHVKEERPEKIPDLKLLVEKKFLALQSKNSDADFQNNEKFVQFKQQLKELKKQCLSIRGAQEED PPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTR PISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQV SNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQ -------------------------------------------------------------- >In-frame_ENST00000287437_ENST00000342287_TCGA-24-1567_NSMCE2_chr8_126194498_+_PBX3_chr9_128677964_length(transcript)=3006nt_BP=634nt GCCCGCTCTCACTTTTCAGCGGCAGGCGAAGGGGGCTGAGGAAAGGAGGTGGGTCTAGGCAGGGGAAATTGGGGTGCCACCAGACGGAGA CAGCTTGGACTACCAGAATCAAGCACTCTTTTGGAAGAGGGTAATCTCTCTCCAAAAACTGAGGACACTTACCTTCCCCATATATTGAGT CCAGCTGTGTTTGGTGGCCCAGGTACTAATTTCAAGATGCCAGGACGTTCCAGTTCAAATTCAGGTTCAACTGGTTTCATCTCCTTCAGT GGTGTAGAGTCTGCTCTCTCCTCCTTGAAAAACTTCCAAGCCTGTATCAACTCTGGTATGGACACAGCTTCTAGTGTTGCTTTGGATCTT GTGGAAAGTCAGACTGAAGTGAGTAGTGAATATAGTATGGACAAGGCAATGGTTGAATTTGCTACATTGGATCGGCAACTAAACCATTAT GTAAAGGCTGTTCAATCTACAATAAATCATGTGAAAGAAGAACGTCCAGAAAAAATACCAGATTTAAAATTATTGGTAGAGAAGAAATTT TTGGCTTTACAGAGCAAGAATTCTGATGCAGACTTTCAAAATAATGAAAAATTTGTACAGTTTAAACAACAGCTGAAAGAACTAAAGAAG CAATGTCTCAGCATCAGAGGAGCCCAGGAGGAGGACCCTCCCGATCCCCAGCTAATGAGACTGGACAATATGCTTTTGGCAGAAGGGGTT TCAGGTCCTGAGAAAGGTGGGGGATCGGCGGCAGCAGCTGCAGCCGCGGCAGCCTCTGGAGGTTCTTCAGATAACTCTATTGAACACTCA GATTACAGAGCCAAATTGACCCAGATCAGACAAATCTATCACACAGAACTGGAGAAATATGAACAGGCATGTAATGAATTTACTACACAT GTGATGAACCTTCTCCGAGAACAGAGTAGAACACGTCCCATTTCTCCAAAAGAGATTGAAAGAATGGTGGGCATCATCCATCGAAAATTT AGTTCCATTCAGATGCAGCTCAAACAAAGCACTTGTGAAGCAGTTATGATTTTAAGATCAAGGTTCCTTGATGCCAGACGGAAAAGGCGT AACTTCAGTAAACAGGCCACAGAAATCTTGAATGAATATTTTTACTCACACCTCAGCAACCCCTACCCCAGTGAAGAAGCCAAAGAGGAG CTGGCCAAGAAATGCAGCATCACAGTGTCACAGGTATCCAATTGGTTTGGCAACAAACGAATCAGGTACAAGAAGAACATTGGCAAGTTT CAGGAAGAAGCCAACCTCTATGCTGCAAAGACGGCCGTGACAGCTGCACACGCAGTAGCAGCAGCTGTGCAGAACAACCAGACCAATTCG CCCACCACACCAAATTCCGGTGGATACCCTCCGTCATGTTATCAATCAGACGGGAGGCTACAGTGATGGCCTTGGAGGAAATTCACTGTA CAGTCCACATAATTTAAATGCTAATGGAGGCTGGCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACAGAAGGCCCAGGAAGTGT GCACTCGGATACCTCTAACTAATCTCTGGCCACACTTTTCCCTGAGCTACATGCCTTGATAAGTGCATTCAGAGCAATAGGAGGAAAAGG AAAGCGTTTTTGTAGCCCACCATCTACAGCTTTACTGTAAAACCTTGTCTTATTCGAGAACTTGGTAAATCTGTTTTTTAAGGAATCATA ATCATTTGTATTTATACTTAAAAACACACAATGTTAAAAAAAATAAAGCACTTTATCCAATTAGGCCAAGATTTAACATTGTTGACAGTC CTGTAGCTATTTTATCATAATTTATTATCAATATTTTACATTAATGGTTTCACAGTTGCCAATTACTTGGCCTTAAGGGTAAAAAGTACA ATATACACTAAACCTCAACCGTTAAAGCAGATGCAAAAATTCACCTCACCTAAATTGAACTTCTTGCATATTTCCATTACTGACTTGGAT TGTCTTTCTTTCATATCACTAATGGAGTTGGAATAAAGAGCTGTTTGCCTATCCCTGTTAATGATGGTTGTGTTTAAGAATCTTCCTCGT CACGTTTGTGTTCAGATCTCTTATGTTATAATTAGATCAGAGACTGGTAGCATCGTTTCTCTCTCTGAAAGCACCAGTGCCCAGAGTCTG CTCGGTAATAAAATTATGGATCCAGATTGTTCTGAGAGACGAAGATACTTGCTGCTGATAGAGGTGAAAACGAGATTGATCCGTCTGGGG TTTTACGGTGTGCACTGGGTGCTGCACAGACTTGTCAAGGTTTGCTACGTCCTCTGGGCATCTGCAAAAGGCCCTGCTCTCTGGAGTGTT GTATATAGTGTAGCAAAAGAGTATTTATACATCCCACCAATCAAAACACAGCTTTATTACCTCATGCGAACTCATACAAACCAATAGAAT TTCAACATGTTCTGTAGCTTAGAGTGCTCACTTACTACCTCTGAACAATACTCACGCTGTAGTTTGTCTCTTTCTTATCTTTTTGCATCT TGTAATTAACTCTTTGTTTCCCTTCATAAAATGTAATGTACATTGTAATCTTTTAAAAGAAAAATCAGGGTTGCACTTGCAACTTTTAAA AAACCGAGTGTGGAAACATTGGGTCTTAATTCAACACAGGATCGGTAAAACTGTTGTAAATACTGAGAAACATTTTGAATGTTCTTCATC TTATTACTAATCCATGCAAAAAAAAAAAAAAAAGCAGCGACTAATTGTGATGCATTCAGATTTCAGTATTCAGTACTGTATATTTCACCC TGTGTAATGGGGCCCCCTCTCCTTTCTCTCTTTTTGTATTGTATGCGATTCTGAAACTGATTGAGTCATGAAAATAATTTGTGGCGGTGA TTCTAATGTATTAAAAACGTTTCGTGTTCCTTTCTAACTGGATTACACCCTGGATTGAAAAAGTCTTCCTCGTGGTAGTTATATGTAGTT >In-frame_ENST00000287437_ENST00000342287_TCGA-24-1567_NSMCE2_chr8_126194498_+_PBX3_chr9_128677964_length(amino acids)=431AA_start in transcript=120_stop in transcript=1415 MEEGNLSPKTEDTYLPHILSPAVFGGPGTNFKMPGRSSSNSGSTGFISFSGVESALSSLKNFQACINSGMDTASSVALDLVESQTEVSSE YSMDKAMVEFATLDRQLNHYVKAVQSTINHVKEERPEKIPDLKLLVEKKFLALQSKNSDADFQNNEKFVQFKQQLKELKKQCLSIRGAQE EDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSR TRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVS -------------------------------------------------------------- >In-frame_ENST00000287437_ENST00000373487_TCGA-24-1567_NSMCE2_chr8_126194498_+_PBX3_chr9_128677964_length(transcript)=3182nt_BP=634nt GCCCGCTCTCACTTTTCAGCGGCAGGCGAAGGGGGCTGAGGAAAGGAGGTGGGTCTAGGCAGGGGAAATTGGGGTGCCACCAGACGGAGA CAGCTTGGACTACCAGAATCAAGCACTCTTTTGGAAGAGGGTAATCTCTCTCCAAAAACTGAGGACACTTACCTTCCCCATATATTGAGT CCAGCTGTGTTTGGTGGCCCAGGTACTAATTTCAAGATGCCAGGACGTTCCAGTTCAAATTCAGGTTCAACTGGTTTCATCTCCTTCAGT GGTGTAGAGTCTGCTCTCTCCTCCTTGAAAAACTTCCAAGCCTGTATCAACTCTGGTATGGACACAGCTTCTAGTGTTGCTTTGGATCTT GTGGAAAGTCAGACTGAAGTGAGTAGTGAATATAGTATGGACAAGGCAATGGTTGAATTTGCTACATTGGATCGGCAACTAAACCATTAT GTAAAGGCTGTTCAATCTACAATAAATCATGTGAAAGAAGAACGTCCAGAAAAAATACCAGATTTAAAATTATTGGTAGAGAAGAAATTT TTGGCTTTACAGAGCAAGAATTCTGATGCAGACTTTCAAAATAATGAAAAATTTGTACAGTTTAAACAACAGCTGAAAGAACTAAAGAAG CAATGTCTCAGCATCAGAGGAGCCCAGGAGGAGGACCCTCCCGATCCCCAGCTAATGAGACTGGACAATATGCTTTTGGCAGAAGGGGTT TCAGGTCCTGAGAAAGGTGGGGGATCGGCGGCAGCAGCTGCAGCCGCGGCAGCCTCTGGAGGTTCTTCAGATAACTCTATTGAACACTCA GATTACAGAGCCAAATTGACCCAGATCAGACAAATCTATCACACAGAACTGGAGAAATATGAACAGGCATGTAATGAATTTACTACACAT GTGATGAACCTTCTCCGAGAACAGAGTAGAACACGTCCCATTTCTCCAAAAGAGATTGAAAGAATGGTGGGCATCATCCATCGAAAATTT AGTTCCATTCAGATGCAGCTCAAACAAAGCACTTGTGAAGCAGTTATGATTTTAAGATCAAGGTTCCTTGATGCCAGACGGAAAAGGCGT AACTTCAGTAAACAGGCCACAGAAATCTTGAATGAATATTTTTACTCACACCTCAGCAACCCCTACCCCAGTGAAGAAGCCAAAGAGGAG CTGGCCAAGAAATGCAGCATCACAGTGTCACAGAGTCTTGTAAAGGATCCAAAAGAAAGAGGGAGCAAAGGTTCTGACATCCAGCCAACT AGCGTGGTATCCAATTGGTTTGGCAACAAACGAATCAGGTACAAGAAGAACATTGGCAAGTTTCAGGAAGAAGCCAACCTCTATGCTGCA AAGACGGCCGTGACAGCTGCACACGCAGTAGCAGCAGCTGTGCAGAACAACCAGACCAATTCGCCCACCACACCAAATTCCGGTTCTTCT GGTTCTTTTAACCTCCCAAATTCTGGGGACATGTTCATGAACATGCAGAGTCTGAATGGGGATTCTTACCAAGGGTCCCAAGTCGGAGCC AATGTGCAATCACAGGTGGATACCCTCCGTCATGTTATCAATCAGACGGGAGGCTACAGTGATGGCCTTGGAGGAAATTCACTGTACAGT CCACATAATTTAAATGCTAATGGAGGCTGGCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACAGAAGGCCCAGGAAGTGTGCAC TCGGATACCTCTAACTAATCTCTGGCCACACTTTTCCCTGAGCTACATGCCTTGATAAGTGCATTCAGAGCAATAGGAGGAAAAGGAAAG CGTTTTTGTAGCCCACCATCTACAGCTTTACTGTAAAACCTTGTCTTATTCGAGAACTTGGTAAATCTGTTTTTTAAGGAATCATAATCA TTTGTATTTATACTTAAAAACACACAATGTTAAAAAAAATAAAGCACTTTATCCAATTAGGCCAAGATTTAACATTGTTGACAGTCCTGT AGCTATTTTATCATAATTTATTATCAATATTTTACATTAATGGTTTCACAGTTGCCAATTACTTGGCCTTAAGGGTAAAAAGTACAATAT ACACTAAACCTCAACCGTTAAAGCAGATGCAAAAATTCACCTCACCTAAATTGAACTTCTTGCATATTTCCATTACTGACTTGGATTGTC TTTCTTTCATATCACTAATGGAGTTGGAATAAAGAGCTGTTTGCCTATCCCTGTTAATGATGGTTGTGTTTAAGAATCTTCCTCGTCACG TTTGTGTTCAGATCTCTTATGTTATAATTAGATCAGAGACTGGTAGCATCGTTTCTCTCTCTGAAAGCACCAGTGCCCAGAGTCTGCTCG GTAATAAAATTATGGATCCAGATTGTTCTGAGAGACGAAGATACTTGCTGCTGATAGAGGTGAAAACGAGATTGATCCGTCTGGGGTTTT ACGGTGTGCACTGGGTGCTGCACAGACTTGTCAAGGTTTGCTACGTCCTCTGGGCATCTGCAAAAGGCCCTGCTCTCTGGAGTGTTGTAT ATAGTGTAGCAAAAGAGTATTTATACATCCCACCAATCAAAACACAGCTTTATTACCTCATGCGAACTCATACAAACCAATAGAATTTCA ACATGTTCTGTAGCTTAGAGTGCTCACTTACTACCTCTGAACAATACTCACGCTGTAGTTTGTCTCTTTCTTATCTTTTTGCATCTTGTA ATTAACTCTTTGTTTCCCTTCATAAAATGTAATGTACATTGTAATCTTTTAAAAGAAAAATCAGGGTTGCACTTGCAACTTTTAAAAAAC CGAGTGTGGAAACATTGGGTCTTAATTCAACACAGGATCGGTAAAACTGTTGTAAATACTGAGAAACATTTTGAATGTTCTTCATCTTAT TACTAATCCATGCAAAAAAAAAAAAAAAAGCAGCGACTAATTGTGATGCATTCAGATTTCAGTATTCAGTACTGTATATTTCACCCTGTG TAATGGGGCCCCCTCTCCTTTCTCTCTTTTTGTATTGTATGCGATTCTGAAACTGATTGAGTCATGAAAATAATTTGTGGCGGTGATTCT AATGTATTAAAAACGTTTCGTGTTCCTTTCTAACTGGATTACACCCTGGATTGAAAAAGTCTTCCTCGTGGTAGTTATATGTAGTTTCAA >In-frame_ENST00000287437_ENST00000373487_TCGA-24-1567_NSMCE2_chr8_126194498_+_PBX3_chr9_128677964_length(amino acids)=535AA_start in transcript=120_stop in transcript=1727 MEEGNLSPKTEDTYLPHILSPAVFGGPGTNFKMPGRSSSNSGSTGFISFSGVESALSSLKNFQACINSGMDTASSVALDLVESQTEVSSE YSMDKAMVEFATLDRQLNHYVKAVQSTINHVKEERPEKIPDLKLLVEKKFLALQSKNSDADFQNNEKFVQFKQQLKELKKQCLSIRGAQE EDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSR TRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVS QSLVKDPKERGSKGSDIQPTSVVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGD -------------------------------------------------------------- >In-frame_ENST00000287437_ENST00000373489_TCGA-24-1567_NSMCE2_chr8_126194498_+_PBX3_chr9_128677964_length(transcript)=2846nt_BP=634nt GCCCGCTCTCACTTTTCAGCGGCAGGCGAAGGGGGCTGAGGAAAGGAGGTGGGTCTAGGCAGGGGAAATTGGGGTGCCACCAGACGGAGA CAGCTTGGACTACCAGAATCAAGCACTCTTTTGGAAGAGGGTAATCTCTCTCCAAAAACTGAGGACACTTACCTTCCCCATATATTGAGT CCAGCTGTGTTTGGTGGCCCAGGTACTAATTTCAAGATGCCAGGACGTTCCAGTTCAAATTCAGGTTCAACTGGTTTCATCTCCTTCAGT GGTGTAGAGTCTGCTCTCTCCTCCTTGAAAAACTTCCAAGCCTGTATCAACTCTGGTATGGACACAGCTTCTAGTGTTGCTTTGGATCTT GTGGAAAGTCAGACTGAAGTGAGTAGTGAATATAGTATGGACAAGGCAATGGTTGAATTTGCTACATTGGATCGGCAACTAAACCATTAT GTAAAGGCTGTTCAATCTACAATAAATCATGTGAAAGAAGAACGTCCAGAAAAAATACCAGATTTAAAATTATTGGTAGAGAAGAAATTT TTGGCTTTACAGAGCAAGAATTCTGATGCAGACTTTCAAAATAATGAAAAATTTGTACAGTTTAAACAACAGCTGAAAGAACTAAAGAAG CAATGTCTCAGCATCAGAGGAGCCCAGGAGGAGGACCCTCCCGATCCCCAGCTAATGAGACTGGACAATATGCTTTTGGCAGAAGGGGTT TCAGGTCCTGAGAAAGGTGGGGGATCGGCGGCAGCAGCTGCAGCCGCGGCAGCCTCTGGAGGTTCTTCAGATAACTCTATTGAACACTCA GATTACAGAGCCAAATTGACCCAGATCAGACAAATCTATCACACAGAACTGGAGAAATATGAACAGGCATGTAATGAATTTACTACACAT GTGATGAACCTTCTCCGAGAACAGAGTAGAACACGTCCCATTTCTCCAAAAGAGATTGAAAGAATGGTGGGCATCATCCATCGAAAATTT AGTTCCATTCAGATGCAGCTCAAACAAAGCACTTGTGAAGCAGTTATGATTTTAAGATCAAGGTTCCTTGATGCCAGACGGAAAAGGCGT AACTTCAGTAAACAGGCCACAGAAATCTTGAATGAATATTTTTACTCACACCTCAGCAACCCCTACCCCAGTGAAGAAGCCAAAGAGGAG CTGGCCAAGAAATGCAGCATCACAGTGTCACAGGTATCCAATTGGTTTGGCAACAAACGAATCAGGTACAAGAAGAACATTGGCAAGTTT CAGGAAGAAGCCAACCTCTATGCTGCAAAGACGGCCGTGACAGCTGCACACGCAGTAGCAGCAGCTGTGCAGAACAACCAGACCAATTCG CCCACCACACCAAATTCCGGTTCTTCTGGTTCTTTTAACCTCCCAAATTCTGGGGACATGTTCATGAACATGCAGAGTCTGAATGGGGAT TCTTACCAAGGGTCCCAAGTCGGAGCCAATGTGCAATCACAGGTGGATACCCTCCGTCATGTTATCAATCAGACGGGAGGCTACAGTGAT GGCCTTGGAGGAAATTCACTGTACAGTCCACATAATTTAAATGCTAATGGAGGCTGGCAGGACGCAACAACTCCATCTTCTGTGACTTCT CCTACAGAAGGCCCAGGAAGTGTGCACTCGGATACCTCTAACTAATCTCTGGCCACACTTTTCCCTGAGCTACATGCCTTGATAAGTGCA TTCAGAGCAATAGGAGGAAAAGGAAAGCGTTTTTGTAGCCCACCATCTACAGCTTTACTGTAAAACCTTGTCTTATTCGAGAACTTGGTA AATCTGTTTTTTAAGGAATCATAATCATTTGTATTTATACTTAAAAACACACAATGTTAAAAAAAATAAAGCACTTTATCCAATTAGGCC AAGATTTAACATTGTTGACAGTCCTGTAGCTATTTTATCATAATTTATTATCAATATTTTACATTAATGGTTTCACAGTTGCCAATTACT TGGCCTTAAGGGTAAAAAGTACAATATACACTAAACCTCAACCGTTAAAGCAGATGCAAAAATTCACCTCACCTAAATTGAACTTCTTGC ATATTTCCATTACTGACTTGGATTGTCTTTCTTTCATATCACTAATGGAGTTGGAATAAAGAGCTGTTTGCCTATCCCTGTTAATGATGG TTGTGTTTAAGAATCTTCCTCGTCACGTTTGTGTTCAGATCTCTTATGTTATAATTAGATCAGAGACTGGTAGCATCGTTTCTCTCTCTG AAAGCACCAGTGCCCAGAGTCTGCTCGGTAATAAAATTATGGATCCAGATTGTTCTGAGAGACGAAGATACTTGCTGCTGATAGAGGTGA AAACGAGATTGATCCGTCTGGGGTTTTACGGTGTGCACTGGGTGCTGCACAGACTTGTCAAGGTTTGCTACGTCCTCTGGGCATCTGCAA AAGGCCCTGCTCTCTGGAGTGTTGTATATAGTGTAGCAAAAGAGTATTTATACATCCCACCAATCAAAACACAGCTTTATTACCTCATGC GAACTCATACAAACCAATAGAATTTCAACATGTTCTGTAGCTTAGAGTGCTCACTTACTACCTCTGAACAATACTCACGCTGTAGTTTGT CTCTTTCTTATCTTTTTGCATCTTGTAATTAACTCTTTGTTTCCCTTCATAAAATGTAATGTACATTGTAATCTTTTAAAAGAAAAATCA GGGTTGCACTTGCAACTTTTAAAAAACCGAGTGTGGAAACATTGGGTCTTAATTCAACACAGGATCGGTAAAACTGTTGTAAATACTGAG >In-frame_ENST00000287437_ENST00000373489_TCGA-24-1567_NSMCE2_chr8_126194498_+_PBX3_chr9_128677964_length(amino acids)=514AA_start in transcript=120_stop in transcript=1664 MEEGNLSPKTEDTYLPHILSPAVFGGPGTNFKMPGRSSSNSGSTGFISFSGVESALSSLKNFQACINSGMDTASSVALDLVESQTEVSSE YSMDKAMVEFATLDRQLNHYVKAVQSTINHVKEERPEKIPDLKLLVEKKFLALQSKNSDADFQNNEKFVQFKQQLKELKKQCLSIRGAQE EDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSR TRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVS QVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGAN -------------------------------------------------------------- >In-frame_ENST00000522563_ENST00000342287_TCGA-24-1567_NSMCE2_chr8_126194498_+_PBX3_chr9_128677964_length(transcript)=2893nt_BP=521nt AGCGGCAGGCGAAGGGGGCTGAGGAAAGGAGGTGGGTCTAGGCAGGGGAAATTGGGGTGCCACCAGACGGAGACAGCTTGGACTACCAGG TACTAATTTCAAGATGCCAGGACGTTCCAGTTCAAATTCAGGTTCAACTGGTTTCATCTCCTTCAGTGGTGTAGAGTCTGCTCTCTCCTC CTTGAAAAACTTCCAAGCCTGTATCAACTCTGGTATGGACACAGCTTCTAGTGTTGCTTTGGATCTTGTGGAAAGTCAGACTGAAGTGAG TAGTGAATATAGTATGGACAAGGCAATGGTTGAATTTGCTACATTGGATCGGCAACTAAACCATTATGTAAAGGCTGTTCAATCTACAAT AAATCATGTGAAAGAAGAACGTCCAGAAAAAATACCAGATTTAAAATTATTGGTAGAGAAGAAATTTTTGGCTTTACAGAGCAAGAATTC TGATGCAGACTTTCAAAATAATGAAAAATTTGTACAGTTTAAACAACAGCTGAAAGAACTAAAGAAGCAATGTCTCAGCATCAGAGGAGC CCAGGAGGAGGACCCTCCCGATCCCCAGCTAATGAGACTGGACAATATGCTTTTGGCAGAAGGGGTTTCAGGTCCTGAGAAAGGTGGGGG ATCGGCGGCAGCAGCTGCAGCCGCGGCAGCCTCTGGAGGTTCTTCAGATAACTCTATTGAACACTCAGATTACAGAGCCAAATTGACCCA GATCAGACAAATCTATCACACAGAACTGGAGAAATATGAACAGGCATGTAATGAATTTACTACACATGTGATGAACCTTCTCCGAGAACA GAGTAGAACACGTCCCATTTCTCCAAAAGAGATTGAAAGAATGGTGGGCATCATCCATCGAAAATTTAGTTCCATTCAGATGCAGCTCAA ACAAAGCACTTGTGAAGCAGTTATGATTTTAAGATCAAGGTTCCTTGATGCCAGACGGAAAAGGCGTAACTTCAGTAAACAGGCCACAGA AATCTTGAATGAATATTTTTACTCACACCTCAGCAACCCCTACCCCAGTGAAGAAGCCAAAGAGGAGCTGGCCAAGAAATGCAGCATCAC AGTGTCACAGGTATCCAATTGGTTTGGCAACAAACGAATCAGGTACAAGAAGAACATTGGCAAGTTTCAGGAAGAAGCCAACCTCTATGC TGCAAAGACGGCCGTGACAGCTGCACACGCAGTAGCAGCAGCTGTGCAGAACAACCAGACCAATTCGCCCACCACACCAAATTCCGGTGG ATACCCTCCGTCATGTTATCAATCAGACGGGAGGCTACAGTGATGGCCTTGGAGGAAATTCACTGTACAGTCCACATAATTTAAATGCTA ATGGAGGCTGGCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACAGAAGGCCCAGGAAGTGTGCACTCGGATACCTCTAACTAAT CTCTGGCCACACTTTTCCCTGAGCTACATGCCTTGATAAGTGCATTCAGAGCAATAGGAGGAAAAGGAAAGCGTTTTTGTAGCCCACCAT CTACAGCTTTACTGTAAAACCTTGTCTTATTCGAGAACTTGGTAAATCTGTTTTTTAAGGAATCATAATCATTTGTATTTATACTTAAAA ACACACAATGTTAAAAAAAATAAAGCACTTTATCCAATTAGGCCAAGATTTAACATTGTTGACAGTCCTGTAGCTATTTTATCATAATTT ATTATCAATATTTTACATTAATGGTTTCACAGTTGCCAATTACTTGGCCTTAAGGGTAAAAAGTACAATATACACTAAACCTCAACCGTT AAAGCAGATGCAAAAATTCACCTCACCTAAATTGAACTTCTTGCATATTTCCATTACTGACTTGGATTGTCTTTCTTTCATATCACTAAT GGAGTTGGAATAAAGAGCTGTTTGCCTATCCCTGTTAATGATGGTTGTGTTTAAGAATCTTCCTCGTCACGTTTGTGTTCAGATCTCTTA TGTTATAATTAGATCAGAGACTGGTAGCATCGTTTCTCTCTCTGAAAGCACCAGTGCCCAGAGTCTGCTCGGTAATAAAATTATGGATCC AGATTGTTCTGAGAGACGAAGATACTTGCTGCTGATAGAGGTGAAAACGAGATTGATCCGTCTGGGGTTTTACGGTGTGCACTGGGTGCT GCACAGACTTGTCAAGGTTTGCTACGTCCTCTGGGCATCTGCAAAAGGCCCTGCTCTCTGGAGTGTTGTATATAGTGTAGCAAAAGAGTA TTTATACATCCCACCAATCAAAACACAGCTTTATTACCTCATGCGAACTCATACAAACCAATAGAATTTCAACATGTTCTGTAGCTTAGA GTGCTCACTTACTACCTCTGAACAATACTCACGCTGTAGTTTGTCTCTTTCTTATCTTTTTGCATCTTGTAATTAACTCTTTGTTTCCCT TCATAAAATGTAATGTACATTGTAATCTTTTAAAAGAAAAATCAGGGTTGCACTTGCAACTTTTAAAAAACCGAGTGTGGAAACATTGGG TCTTAATTCAACACAGGATCGGTAAAACTGTTGTAAATACTGAGAAACATTTTGAATGTTCTTCATCTTATTACTAATCCATGCAAAAAA AAAAAAAAAAGCAGCGACTAATTGTGATGCATTCAGATTTCAGTATTCAGTACTGTATATTTCACCCTGTGTAATGGGGCCCCCTCTCCT TTCTCTCTTTTTGTATTGTATGCGATTCTGAAACTGATTGAGTCATGAAAATAATTTGTGGCGGTGATTCTAATGTATTAAAAACGTTTC GTGTTCCTTTCTAACTGGATTACACCCTGGATTGAAAAAGTCTTCCTCGTGGTAGTTATATGTAGTTTCAAACATGAATAAACTTTTTGC >In-frame_ENST00000522563_ENST00000342287_TCGA-24-1567_NSMCE2_chr8_126194498_+_PBX3_chr9_128677964_length(amino acids)=399AA_start in transcript=103_stop in transcript=1302 MPGRSSSNSGSTGFISFSGVESALSSLKNFQACINSGMDTASSVALDLVESQTEVSSEYSMDKAMVEFATLDRQLNHYVKAVQSTINHVK EERPEKIPDLKLLVEKKFLALQSKNSDADFQNNEKFVQFKQQLKELKKQCLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAA AAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTC EAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTA -------------------------------------------------------------- >In-frame_ENST00000522563_ENST00000373487_TCGA-24-1567_NSMCE2_chr8_126194498_+_PBX3_chr9_128677964_length(transcript)=3069nt_BP=521nt AGCGGCAGGCGAAGGGGGCTGAGGAAAGGAGGTGGGTCTAGGCAGGGGAAATTGGGGTGCCACCAGACGGAGACAGCTTGGACTACCAGG TACTAATTTCAAGATGCCAGGACGTTCCAGTTCAAATTCAGGTTCAACTGGTTTCATCTCCTTCAGTGGTGTAGAGTCTGCTCTCTCCTC CTTGAAAAACTTCCAAGCCTGTATCAACTCTGGTATGGACACAGCTTCTAGTGTTGCTTTGGATCTTGTGGAAAGTCAGACTGAAGTGAG TAGTGAATATAGTATGGACAAGGCAATGGTTGAATTTGCTACATTGGATCGGCAACTAAACCATTATGTAAAGGCTGTTCAATCTACAAT AAATCATGTGAAAGAAGAACGTCCAGAAAAAATACCAGATTTAAAATTATTGGTAGAGAAGAAATTTTTGGCTTTACAGAGCAAGAATTC TGATGCAGACTTTCAAAATAATGAAAAATTTGTACAGTTTAAACAACAGCTGAAAGAACTAAAGAAGCAATGTCTCAGCATCAGAGGAGC CCAGGAGGAGGACCCTCCCGATCCCCAGCTAATGAGACTGGACAATATGCTTTTGGCAGAAGGGGTTTCAGGTCCTGAGAAAGGTGGGGG ATCGGCGGCAGCAGCTGCAGCCGCGGCAGCCTCTGGAGGTTCTTCAGATAACTCTATTGAACACTCAGATTACAGAGCCAAATTGACCCA GATCAGACAAATCTATCACACAGAACTGGAGAAATATGAACAGGCATGTAATGAATTTACTACACATGTGATGAACCTTCTCCGAGAACA GAGTAGAACACGTCCCATTTCTCCAAAAGAGATTGAAAGAATGGTGGGCATCATCCATCGAAAATTTAGTTCCATTCAGATGCAGCTCAA ACAAAGCACTTGTGAAGCAGTTATGATTTTAAGATCAAGGTTCCTTGATGCCAGACGGAAAAGGCGTAACTTCAGTAAACAGGCCACAGA AATCTTGAATGAATATTTTTACTCACACCTCAGCAACCCCTACCCCAGTGAAGAAGCCAAAGAGGAGCTGGCCAAGAAATGCAGCATCAC AGTGTCACAGAGTCTTGTAAAGGATCCAAAAGAAAGAGGGAGCAAAGGTTCTGACATCCAGCCAACTAGCGTGGTATCCAATTGGTTTGG CAACAAACGAATCAGGTACAAGAAGAACATTGGCAAGTTTCAGGAAGAAGCCAACCTCTATGCTGCAAAGACGGCCGTGACAGCTGCACA CGCAGTAGCAGCAGCTGTGCAGAACAACCAGACCAATTCGCCCACCACACCAAATTCCGGTTCTTCTGGTTCTTTTAACCTCCCAAATTC TGGGGACATGTTCATGAACATGCAGAGTCTGAATGGGGATTCTTACCAAGGGTCCCAAGTCGGAGCCAATGTGCAATCACAGGTGGATAC CCTCCGTCATGTTATCAATCAGACGGGAGGCTACAGTGATGGCCTTGGAGGAAATTCACTGTACAGTCCACATAATTTAAATGCTAATGG AGGCTGGCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACAGAAGGCCCAGGAAGTGTGCACTCGGATACCTCTAACTAATCTCT GGCCACACTTTTCCCTGAGCTACATGCCTTGATAAGTGCATTCAGAGCAATAGGAGGAAAAGGAAAGCGTTTTTGTAGCCCACCATCTAC AGCTTTACTGTAAAACCTTGTCTTATTCGAGAACTTGGTAAATCTGTTTTTTAAGGAATCATAATCATTTGTATTTATACTTAAAAACAC ACAATGTTAAAAAAAATAAAGCACTTTATCCAATTAGGCCAAGATTTAACATTGTTGACAGTCCTGTAGCTATTTTATCATAATTTATTA TCAATATTTTACATTAATGGTTTCACAGTTGCCAATTACTTGGCCTTAAGGGTAAAAAGTACAATATACACTAAACCTCAACCGTTAAAG CAGATGCAAAAATTCACCTCACCTAAATTGAACTTCTTGCATATTTCCATTACTGACTTGGATTGTCTTTCTTTCATATCACTAATGGAG TTGGAATAAAGAGCTGTTTGCCTATCCCTGTTAATGATGGTTGTGTTTAAGAATCTTCCTCGTCACGTTTGTGTTCAGATCTCTTATGTT ATAATTAGATCAGAGACTGGTAGCATCGTTTCTCTCTCTGAAAGCACCAGTGCCCAGAGTCTGCTCGGTAATAAAATTATGGATCCAGAT TGTTCTGAGAGACGAAGATACTTGCTGCTGATAGAGGTGAAAACGAGATTGATCCGTCTGGGGTTTTACGGTGTGCACTGGGTGCTGCAC AGACTTGTCAAGGTTTGCTACGTCCTCTGGGCATCTGCAAAAGGCCCTGCTCTCTGGAGTGTTGTATATAGTGTAGCAAAAGAGTATTTA TACATCCCACCAATCAAAACACAGCTTTATTACCTCATGCGAACTCATACAAACCAATAGAATTTCAACATGTTCTGTAGCTTAGAGTGC TCACTTACTACCTCTGAACAATACTCACGCTGTAGTTTGTCTCTTTCTTATCTTTTTGCATCTTGTAATTAACTCTTTGTTTCCCTTCAT AAAATGTAATGTACATTGTAATCTTTTAAAAGAAAAATCAGGGTTGCACTTGCAACTTTTAAAAAACCGAGTGTGGAAACATTGGGTCTT AATTCAACACAGGATCGGTAAAACTGTTGTAAATACTGAGAAACATTTTGAATGTTCTTCATCTTATTACTAATCCATGCAAAAAAAAAA AAAAAAGCAGCGACTAATTGTGATGCATTCAGATTTCAGTATTCAGTACTGTATATTTCACCCTGTGTAATGGGGCCCCCTCTCCTTTCT CTCTTTTTGTATTGTATGCGATTCTGAAACTGATTGAGTCATGAAAATAATTTGTGGCGGTGATTCTAATGTATTAAAAACGTTTCGTGT TCCTTTCTAACTGGATTACACCCTGGATTGAAAAAGTCTTCCTCGTGGTAGTTATATGTAGTTTCAAACATGAATAAACTTTTTGCTTTC >In-frame_ENST00000522563_ENST00000373487_TCGA-24-1567_NSMCE2_chr8_126194498_+_PBX3_chr9_128677964_length(amino acids)=503AA_start in transcript=103_stop in transcript=1614 MPGRSSSNSGSTGFISFSGVESALSSLKNFQACINSGMDTASSVALDLVESQTEVSSEYSMDKAMVEFATLDRQLNHYVKAVQSTINHVK EERPEKIPDLKLLVEKKFLALQSKNSDADFQNNEKFVQFKQQLKELKKQCLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAA AAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTC EAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQSLVKDPKERGSKGSDIQPTSVVSNWFGNKRI RYKKNIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQSQVDTLRHV -------------------------------------------------------------- >In-frame_ENST00000522563_ENST00000373489_TCGA-24-1567_NSMCE2_chr8_126194498_+_PBX3_chr9_128677964_length(transcript)=2733nt_BP=521nt AGCGGCAGGCGAAGGGGGCTGAGGAAAGGAGGTGGGTCTAGGCAGGGGAAATTGGGGTGCCACCAGACGGAGACAGCTTGGACTACCAGG TACTAATTTCAAGATGCCAGGACGTTCCAGTTCAAATTCAGGTTCAACTGGTTTCATCTCCTTCAGTGGTGTAGAGTCTGCTCTCTCCTC CTTGAAAAACTTCCAAGCCTGTATCAACTCTGGTATGGACACAGCTTCTAGTGTTGCTTTGGATCTTGTGGAAAGTCAGACTGAAGTGAG TAGTGAATATAGTATGGACAAGGCAATGGTTGAATTTGCTACATTGGATCGGCAACTAAACCATTATGTAAAGGCTGTTCAATCTACAAT AAATCATGTGAAAGAAGAACGTCCAGAAAAAATACCAGATTTAAAATTATTGGTAGAGAAGAAATTTTTGGCTTTACAGAGCAAGAATTC TGATGCAGACTTTCAAAATAATGAAAAATTTGTACAGTTTAAACAACAGCTGAAAGAACTAAAGAAGCAATGTCTCAGCATCAGAGGAGC CCAGGAGGAGGACCCTCCCGATCCCCAGCTAATGAGACTGGACAATATGCTTTTGGCAGAAGGGGTTTCAGGTCCTGAGAAAGGTGGGGG ATCGGCGGCAGCAGCTGCAGCCGCGGCAGCCTCTGGAGGTTCTTCAGATAACTCTATTGAACACTCAGATTACAGAGCCAAATTGACCCA GATCAGACAAATCTATCACACAGAACTGGAGAAATATGAACAGGCATGTAATGAATTTACTACACATGTGATGAACCTTCTCCGAGAACA GAGTAGAACACGTCCCATTTCTCCAAAAGAGATTGAAAGAATGGTGGGCATCATCCATCGAAAATTTAGTTCCATTCAGATGCAGCTCAA ACAAAGCACTTGTGAAGCAGTTATGATTTTAAGATCAAGGTTCCTTGATGCCAGACGGAAAAGGCGTAACTTCAGTAAACAGGCCACAGA AATCTTGAATGAATATTTTTACTCACACCTCAGCAACCCCTACCCCAGTGAAGAAGCCAAAGAGGAGCTGGCCAAGAAATGCAGCATCAC AGTGTCACAGGTATCCAATTGGTTTGGCAACAAACGAATCAGGTACAAGAAGAACATTGGCAAGTTTCAGGAAGAAGCCAACCTCTATGC TGCAAAGACGGCCGTGACAGCTGCACACGCAGTAGCAGCAGCTGTGCAGAACAACCAGACCAATTCGCCCACCACACCAAATTCCGGTTC TTCTGGTTCTTTTAACCTCCCAAATTCTGGGGACATGTTCATGAACATGCAGAGTCTGAATGGGGATTCTTACCAAGGGTCCCAAGTCGG AGCCAATGTGCAATCACAGGTGGATACCCTCCGTCATGTTATCAATCAGACGGGAGGCTACAGTGATGGCCTTGGAGGAAATTCACTGTA CAGTCCACATAATTTAAATGCTAATGGAGGCTGGCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACAGAAGGCCCAGGAAGTGT GCACTCGGATACCTCTAACTAATCTCTGGCCACACTTTTCCCTGAGCTACATGCCTTGATAAGTGCATTCAGAGCAATAGGAGGAAAAGG AAAGCGTTTTTGTAGCCCACCATCTACAGCTTTACTGTAAAACCTTGTCTTATTCGAGAACTTGGTAAATCTGTTTTTTAAGGAATCATA ATCATTTGTATTTATACTTAAAAACACACAATGTTAAAAAAAATAAAGCACTTTATCCAATTAGGCCAAGATTTAACATTGTTGACAGTC CTGTAGCTATTTTATCATAATTTATTATCAATATTTTACATTAATGGTTTCACAGTTGCCAATTACTTGGCCTTAAGGGTAAAAAGTACA ATATACACTAAACCTCAACCGTTAAAGCAGATGCAAAAATTCACCTCACCTAAATTGAACTTCTTGCATATTTCCATTACTGACTTGGAT TGTCTTTCTTTCATATCACTAATGGAGTTGGAATAAAGAGCTGTTTGCCTATCCCTGTTAATGATGGTTGTGTTTAAGAATCTTCCTCGT CACGTTTGTGTTCAGATCTCTTATGTTATAATTAGATCAGAGACTGGTAGCATCGTTTCTCTCTCTGAAAGCACCAGTGCCCAGAGTCTG CTCGGTAATAAAATTATGGATCCAGATTGTTCTGAGAGACGAAGATACTTGCTGCTGATAGAGGTGAAAACGAGATTGATCCGTCTGGGG TTTTACGGTGTGCACTGGGTGCTGCACAGACTTGTCAAGGTTTGCTACGTCCTCTGGGCATCTGCAAAAGGCCCTGCTCTCTGGAGTGTT GTATATAGTGTAGCAAAAGAGTATTTATACATCCCACCAATCAAAACACAGCTTTATTACCTCATGCGAACTCATACAAACCAATAGAAT TTCAACATGTTCTGTAGCTTAGAGTGCTCACTTACTACCTCTGAACAATACTCACGCTGTAGTTTGTCTCTTTCTTATCTTTTTGCATCT TGTAATTAACTCTTTGTTTCCCTTCATAAAATGTAATGTACATTGTAATCTTTTAAAAGAAAAATCAGGGTTGCACTTGCAACTTTTAAA AAACCGAGTGTGGAAACATTGGGTCTTAATTCAACACAGGATCGGTAAAACTGTTGTAAATACTGAGAAACATTTTGAATGTTCTTCATC >In-frame_ENST00000522563_ENST00000373489_TCGA-24-1567_NSMCE2_chr8_126194498_+_PBX3_chr9_128677964_length(amino acids)=482AA_start in transcript=103_stop in transcript=1551 MPGRSSSNSGSTGFISFSGVESALSSLKNFQACINSGMDTASSVALDLVESQTEVSSEYSMDKAMVEFATLDRQLNHYVKAVQSTINHVK EERPEKIPDLKLLVEKKFLALQSKNSDADFQNNEKFVQFKQQLKELKKQCLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAA AAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTC EAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTA VTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQSQVDTLRHVINQTGGYSDGLGGNSLYSPHN -------------------------------------------------------------- >In-frame_ENST00000517315_ENST00000342287_TCGA-24-1567_NSMCE2_chr8_126194498_+_PBX3_chr9_128677964_length(transcript)=2809nt_BP=437nt TAATATGTGGTCTTTTGTGACTGGCTGTTTTCTTAGCATAAGGTTTTCAAGGTTCATCCATGTTGCATGTATCAGTGAGAGAGGTGGATG CTTTGGAGCTTTTGGCTCAGAAATGATAATGTACATAACACAGGCAGCCATGAGTTAAAATGCAAGTTCTGCTATCTGCTAGCTCTCTGA AGTGAGTAGTGAATATAGTATGGACAAGGCAATGGTTGAATTTGCTACATTGGATCGGCAACTAAACCATTATGTAAAGGCTGTTCAATC TACAATAAATCATGTGAAAGAAGAACGTCCAGAAAAAATACCAGATTTAAAATTATTGGTAGAGAAGAAATTTTTGGCTTTACAGAGCAA GAATTCTGATGCAGACTTTCAAAATAATGAAAAATTTGTACAGTTTAAACAACAGCTGAAAGAACTAAAGAAGCAATGTCTCAGCATCAG AGGAGCCCAGGAGGAGGACCCTCCCGATCCCCAGCTAATGAGACTGGACAATATGCTTTTGGCAGAAGGGGTTTCAGGTCCTGAGAAAGG TGGGGGATCGGCGGCAGCAGCTGCAGCCGCGGCAGCCTCTGGAGGTTCTTCAGATAACTCTATTGAACACTCAGATTACAGAGCCAAATT GACCCAGATCAGACAAATCTATCACACAGAACTGGAGAAATATGAACAGGCATGTAATGAATTTACTACACATGTGATGAACCTTCTCCG AGAACAGAGTAGAACACGTCCCATTTCTCCAAAAGAGATTGAAAGAATGGTGGGCATCATCCATCGAAAATTTAGTTCCATTCAGATGCA GCTCAAACAAAGCACTTGTGAAGCAGTTATGATTTTAAGATCAAGGTTCCTTGATGCCAGACGGAAAAGGCGTAACTTCAGTAAACAGGC CACAGAAATCTTGAATGAATATTTTTACTCACACCTCAGCAACCCCTACCCCAGTGAAGAAGCCAAAGAGGAGCTGGCCAAGAAATGCAG CATCACAGTGTCACAGGTATCCAATTGGTTTGGCAACAAACGAATCAGGTACAAGAAGAACATTGGCAAGTTTCAGGAAGAAGCCAACCT CTATGCTGCAAAGACGGCCGTGACAGCTGCACACGCAGTAGCAGCAGCTGTGCAGAACAACCAGACCAATTCGCCCACCACACCAAATTC CGGTGGATACCCTCCGTCATGTTATCAATCAGACGGGAGGCTACAGTGATGGCCTTGGAGGAAATTCACTGTACAGTCCACATAATTTAA ATGCTAATGGAGGCTGGCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACAGAAGGCCCAGGAAGTGTGCACTCGGATACCTCTA ACTAATCTCTGGCCACACTTTTCCCTGAGCTACATGCCTTGATAAGTGCATTCAGAGCAATAGGAGGAAAAGGAAAGCGTTTTTGTAGCC CACCATCTACAGCTTTACTGTAAAACCTTGTCTTATTCGAGAACTTGGTAAATCTGTTTTTTAAGGAATCATAATCATTTGTATTTATAC TTAAAAACACACAATGTTAAAAAAAATAAAGCACTTTATCCAATTAGGCCAAGATTTAACATTGTTGACAGTCCTGTAGCTATTTTATCA TAATTTATTATCAATATTTTACATTAATGGTTTCACAGTTGCCAATTACTTGGCCTTAAGGGTAAAAAGTACAATATACACTAAACCTCA ACCGTTAAAGCAGATGCAAAAATTCACCTCACCTAAATTGAACTTCTTGCATATTTCCATTACTGACTTGGATTGTCTTTCTTTCATATC ACTAATGGAGTTGGAATAAAGAGCTGTTTGCCTATCCCTGTTAATGATGGTTGTGTTTAAGAATCTTCCTCGTCACGTTTGTGTTCAGAT CTCTTATGTTATAATTAGATCAGAGACTGGTAGCATCGTTTCTCTCTCTGAAAGCACCAGTGCCCAGAGTCTGCTCGGTAATAAAATTAT GGATCCAGATTGTTCTGAGAGACGAAGATACTTGCTGCTGATAGAGGTGAAAACGAGATTGATCCGTCTGGGGTTTTACGGTGTGCACTG GGTGCTGCACAGACTTGTCAAGGTTTGCTACGTCCTCTGGGCATCTGCAAAAGGCCCTGCTCTCTGGAGTGTTGTATATAGTGTAGCAAA AGAGTATTTATACATCCCACCAATCAAAACACAGCTTTATTACCTCATGCGAACTCATACAAACCAATAGAATTTCAACATGTTCTGTAG CTTAGAGTGCTCACTTACTACCTCTGAACAATACTCACGCTGTAGTTTGTCTCTTTCTTATCTTTTTGCATCTTGTAATTAACTCTTTGT TTCCCTTCATAAAATGTAATGTACATTGTAATCTTTTAAAAGAAAAATCAGGGTTGCACTTGCAACTTTTAAAAAACCGAGTGTGGAAAC ATTGGGTCTTAATTCAACACAGGATCGGTAAAACTGTTGTAAATACTGAGAAACATTTTGAATGTTCTTCATCTTATTACTAATCCATGC AAAAAAAAAAAAAAAAGCAGCGACTAATTGTGATGCATTCAGATTTCAGTATTCAGTACTGTATATTTCACCCTGTGTAATGGGGCCCCC TCTCCTTTCTCTCTTTTTGTATTGTATGCGATTCTGAAACTGATTGAGTCATGAAAATAATTTGTGGCGGTGATTCTAATGTATTAAAAA CGTTTCGTGTTCCTTTCTAACTGGATTACACCCTGGATTGAAAAAGTCTTCCTCGTGGTAGTTATATGTAGTTTCAAACATGAATAAACT >In-frame_ENST00000517315_ENST00000342287_TCGA-24-1567_NSMCE2_chr8_126194498_+_PBX3_chr9_128677964_length(amino acids)=339AA_start in transcript=199_stop in transcript=1218 MDKAMVEFATLDRQLNHYVKAVQSTINHVKEERPEKIPDLKLLVEKKFLALQSKNSDADFQNNEKFVQFKQQLKELKKQCLSIRGAQEED PPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTR PISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQV -------------------------------------------------------------- >In-frame_ENST00000517315_ENST00000373487_TCGA-24-1567_NSMCE2_chr8_126194498_+_PBX3_chr9_128677964_length(transcript)=2985nt_BP=437nt TAATATGTGGTCTTTTGTGACTGGCTGTTTTCTTAGCATAAGGTTTTCAAGGTTCATCCATGTTGCATGTATCAGTGAGAGAGGTGGATG CTTTGGAGCTTTTGGCTCAGAAATGATAATGTACATAACACAGGCAGCCATGAGTTAAAATGCAAGTTCTGCTATCTGCTAGCTCTCTGA AGTGAGTAGTGAATATAGTATGGACAAGGCAATGGTTGAATTTGCTACATTGGATCGGCAACTAAACCATTATGTAAAGGCTGTTCAATC TACAATAAATCATGTGAAAGAAGAACGTCCAGAAAAAATACCAGATTTAAAATTATTGGTAGAGAAGAAATTTTTGGCTTTACAGAGCAA GAATTCTGATGCAGACTTTCAAAATAATGAAAAATTTGTACAGTTTAAACAACAGCTGAAAGAACTAAAGAAGCAATGTCTCAGCATCAG AGGAGCCCAGGAGGAGGACCCTCCCGATCCCCAGCTAATGAGACTGGACAATATGCTTTTGGCAGAAGGGGTTTCAGGTCCTGAGAAAGG TGGGGGATCGGCGGCAGCAGCTGCAGCCGCGGCAGCCTCTGGAGGTTCTTCAGATAACTCTATTGAACACTCAGATTACAGAGCCAAATT GACCCAGATCAGACAAATCTATCACACAGAACTGGAGAAATATGAACAGGCATGTAATGAATTTACTACACATGTGATGAACCTTCTCCG AGAACAGAGTAGAACACGTCCCATTTCTCCAAAAGAGATTGAAAGAATGGTGGGCATCATCCATCGAAAATTTAGTTCCATTCAGATGCA GCTCAAACAAAGCACTTGTGAAGCAGTTATGATTTTAAGATCAAGGTTCCTTGATGCCAGACGGAAAAGGCGTAACTTCAGTAAACAGGC CACAGAAATCTTGAATGAATATTTTTACTCACACCTCAGCAACCCCTACCCCAGTGAAGAAGCCAAAGAGGAGCTGGCCAAGAAATGCAG CATCACAGTGTCACAGAGTCTTGTAAAGGATCCAAAAGAAAGAGGGAGCAAAGGTTCTGACATCCAGCCAACTAGCGTGGTATCCAATTG GTTTGGCAACAAACGAATCAGGTACAAGAAGAACATTGGCAAGTTTCAGGAAGAAGCCAACCTCTATGCTGCAAAGACGGCCGTGACAGC TGCACACGCAGTAGCAGCAGCTGTGCAGAACAACCAGACCAATTCGCCCACCACACCAAATTCCGGTTCTTCTGGTTCTTTTAACCTCCC AAATTCTGGGGACATGTTCATGAACATGCAGAGTCTGAATGGGGATTCTTACCAAGGGTCCCAAGTCGGAGCCAATGTGCAATCACAGGT GGATACCCTCCGTCATGTTATCAATCAGACGGGAGGCTACAGTGATGGCCTTGGAGGAAATTCACTGTACAGTCCACATAATTTAAATGC TAATGGAGGCTGGCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACAGAAGGCCCAGGAAGTGTGCACTCGGATACCTCTAACTA ATCTCTGGCCACACTTTTCCCTGAGCTACATGCCTTGATAAGTGCATTCAGAGCAATAGGAGGAAAAGGAAAGCGTTTTTGTAGCCCACC ATCTACAGCTTTACTGTAAAACCTTGTCTTATTCGAGAACTTGGTAAATCTGTTTTTTAAGGAATCATAATCATTTGTATTTATACTTAA AAACACACAATGTTAAAAAAAATAAAGCACTTTATCCAATTAGGCCAAGATTTAACATTGTTGACAGTCCTGTAGCTATTTTATCATAAT TTATTATCAATATTTTACATTAATGGTTTCACAGTTGCCAATTACTTGGCCTTAAGGGTAAAAAGTACAATATACACTAAACCTCAACCG TTAAAGCAGATGCAAAAATTCACCTCACCTAAATTGAACTTCTTGCATATTTCCATTACTGACTTGGATTGTCTTTCTTTCATATCACTA ATGGAGTTGGAATAAAGAGCTGTTTGCCTATCCCTGTTAATGATGGTTGTGTTTAAGAATCTTCCTCGTCACGTTTGTGTTCAGATCTCT TATGTTATAATTAGATCAGAGACTGGTAGCATCGTTTCTCTCTCTGAAAGCACCAGTGCCCAGAGTCTGCTCGGTAATAAAATTATGGAT CCAGATTGTTCTGAGAGACGAAGATACTTGCTGCTGATAGAGGTGAAAACGAGATTGATCCGTCTGGGGTTTTACGGTGTGCACTGGGTG CTGCACAGACTTGTCAAGGTTTGCTACGTCCTCTGGGCATCTGCAAAAGGCCCTGCTCTCTGGAGTGTTGTATATAGTGTAGCAAAAGAG TATTTATACATCCCACCAATCAAAACACAGCTTTATTACCTCATGCGAACTCATACAAACCAATAGAATTTCAACATGTTCTGTAGCTTA GAGTGCTCACTTACTACCTCTGAACAATACTCACGCTGTAGTTTGTCTCTTTCTTATCTTTTTGCATCTTGTAATTAACTCTTTGTTTCC CTTCATAAAATGTAATGTACATTGTAATCTTTTAAAAGAAAAATCAGGGTTGCACTTGCAACTTTTAAAAAACCGAGTGTGGAAACATTG GGTCTTAATTCAACACAGGATCGGTAAAACTGTTGTAAATACTGAGAAACATTTTGAATGTTCTTCATCTTATTACTAATCCATGCAAAA AAAAAAAAAAAAGCAGCGACTAATTGTGATGCATTCAGATTTCAGTATTCAGTACTGTATATTTCACCCTGTGTAATGGGGCCCCCTCTC CTTTCTCTCTTTTTGTATTGTATGCGATTCTGAAACTGATTGAGTCATGAAAATAATTTGTGGCGGTGATTCTAATGTATTAAAAACGTT TCGTGTTCCTTTCTAACTGGATTACACCCTGGATTGAAAAAGTCTTCCTCGTGGTAGTTATATGTAGTTTCAAACATGAATAAACTTTTT >In-frame_ENST00000517315_ENST00000373487_TCGA-24-1567_NSMCE2_chr8_126194498_+_PBX3_chr9_128677964_length(amino acids)=443AA_start in transcript=199_stop in transcript=1530 MDKAMVEFATLDRQLNHYVKAVQSTINHVKEERPEKIPDLKLLVEKKFLALQSKNSDADFQNNEKFVQFKQQLKELKKQCLSIRGAQEED PPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTR PISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQS LVKDPKERGSKGSDIQPTSVVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMF -------------------------------------------------------------- >In-frame_ENST00000517315_ENST00000373489_TCGA-24-1567_NSMCE2_chr8_126194498_+_PBX3_chr9_128677964_length(transcript)=2649nt_BP=437nt TAATATGTGGTCTTTTGTGACTGGCTGTTTTCTTAGCATAAGGTTTTCAAGGTTCATCCATGTTGCATGTATCAGTGAGAGAGGTGGATG CTTTGGAGCTTTTGGCTCAGAAATGATAATGTACATAACACAGGCAGCCATGAGTTAAAATGCAAGTTCTGCTATCTGCTAGCTCTCTGA AGTGAGTAGTGAATATAGTATGGACAAGGCAATGGTTGAATTTGCTACATTGGATCGGCAACTAAACCATTATGTAAAGGCTGTTCAATC TACAATAAATCATGTGAAAGAAGAACGTCCAGAAAAAATACCAGATTTAAAATTATTGGTAGAGAAGAAATTTTTGGCTTTACAGAGCAA GAATTCTGATGCAGACTTTCAAAATAATGAAAAATTTGTACAGTTTAAACAACAGCTGAAAGAACTAAAGAAGCAATGTCTCAGCATCAG AGGAGCCCAGGAGGAGGACCCTCCCGATCCCCAGCTAATGAGACTGGACAATATGCTTTTGGCAGAAGGGGTTTCAGGTCCTGAGAAAGG TGGGGGATCGGCGGCAGCAGCTGCAGCCGCGGCAGCCTCTGGAGGTTCTTCAGATAACTCTATTGAACACTCAGATTACAGAGCCAAATT GACCCAGATCAGACAAATCTATCACACAGAACTGGAGAAATATGAACAGGCATGTAATGAATTTACTACACATGTGATGAACCTTCTCCG AGAACAGAGTAGAACACGTCCCATTTCTCCAAAAGAGATTGAAAGAATGGTGGGCATCATCCATCGAAAATTTAGTTCCATTCAGATGCA GCTCAAACAAAGCACTTGTGAAGCAGTTATGATTTTAAGATCAAGGTTCCTTGATGCCAGACGGAAAAGGCGTAACTTCAGTAAACAGGC CACAGAAATCTTGAATGAATATTTTTACTCACACCTCAGCAACCCCTACCCCAGTGAAGAAGCCAAAGAGGAGCTGGCCAAGAAATGCAG CATCACAGTGTCACAGGTATCCAATTGGTTTGGCAACAAACGAATCAGGTACAAGAAGAACATTGGCAAGTTTCAGGAAGAAGCCAACCT CTATGCTGCAAAGACGGCCGTGACAGCTGCACACGCAGTAGCAGCAGCTGTGCAGAACAACCAGACCAATTCGCCCACCACACCAAATTC CGGTTCTTCTGGTTCTTTTAACCTCCCAAATTCTGGGGACATGTTCATGAACATGCAGAGTCTGAATGGGGATTCTTACCAAGGGTCCCA AGTCGGAGCCAATGTGCAATCACAGGTGGATACCCTCCGTCATGTTATCAATCAGACGGGAGGCTACAGTGATGGCCTTGGAGGAAATTC ACTGTACAGTCCACATAATTTAAATGCTAATGGAGGCTGGCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACAGAAGGCCCAGG AAGTGTGCACTCGGATACCTCTAACTAATCTCTGGCCACACTTTTCCCTGAGCTACATGCCTTGATAAGTGCATTCAGAGCAATAGGAGG AAAAGGAAAGCGTTTTTGTAGCCCACCATCTACAGCTTTACTGTAAAACCTTGTCTTATTCGAGAACTTGGTAAATCTGTTTTTTAAGGA ATCATAATCATTTGTATTTATACTTAAAAACACACAATGTTAAAAAAAATAAAGCACTTTATCCAATTAGGCCAAGATTTAACATTGTTG ACAGTCCTGTAGCTATTTTATCATAATTTATTATCAATATTTTACATTAATGGTTTCACAGTTGCCAATTACTTGGCCTTAAGGGTAAAA AGTACAATATACACTAAACCTCAACCGTTAAAGCAGATGCAAAAATTCACCTCACCTAAATTGAACTTCTTGCATATTTCCATTACTGAC TTGGATTGTCTTTCTTTCATATCACTAATGGAGTTGGAATAAAGAGCTGTTTGCCTATCCCTGTTAATGATGGTTGTGTTTAAGAATCTT CCTCGTCACGTTTGTGTTCAGATCTCTTATGTTATAATTAGATCAGAGACTGGTAGCATCGTTTCTCTCTCTGAAAGCACCAGTGCCCAG AGTCTGCTCGGTAATAAAATTATGGATCCAGATTGTTCTGAGAGACGAAGATACTTGCTGCTGATAGAGGTGAAAACGAGATTGATCCGT CTGGGGTTTTACGGTGTGCACTGGGTGCTGCACAGACTTGTCAAGGTTTGCTACGTCCTCTGGGCATCTGCAAAAGGCCCTGCTCTCTGG AGTGTTGTATATAGTGTAGCAAAAGAGTATTTATACATCCCACCAATCAAAACACAGCTTTATTACCTCATGCGAACTCATACAAACCAA TAGAATTTCAACATGTTCTGTAGCTTAGAGTGCTCACTTACTACCTCTGAACAATACTCACGCTGTAGTTTGTCTCTTTCTTATCTTTTT GCATCTTGTAATTAACTCTTTGTTTCCCTTCATAAAATGTAATGTACATTGTAATCTTTTAAAAGAAAAATCAGGGTTGCACTTGCAACT TTTAAAAAACCGAGTGTGGAAACATTGGGTCTTAATTCAACACAGGATCGGTAAAACTGTTGTAAATACTGAGAAACATTTTGAATGTTC >In-frame_ENST00000517315_ENST00000373489_TCGA-24-1567_NSMCE2_chr8_126194498_+_PBX3_chr9_128677964_length(amino acids)=422AA_start in transcript=199_stop in transcript=1467 MDKAMVEFATLDRQLNHYVKAVQSTINHVKEERPEKIPDLKLLVEKKFLALQSKNSDADFQNNEKFVQFKQQLKELKKQCLSIRGAQEED PPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTR PISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQV SNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQ -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for NSMCE2-PBX3 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for NSMCE2-PBX3 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for NSMCE2-PBX3 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | NSMCE2 | C4310647 | SECKEL SYNDROME 10 | 1 | GENOMICS_ENGLAND |