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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:NUBP2-P4HB (FusionGDB2 ID:60366) |
Fusion Gene Summary for NUBP2-P4HB |
Fusion gene summary |
Fusion gene information | Fusion gene name: NUBP2-P4HB | Fusion gene ID: 60366 | Hgene | Tgene | Gene symbol | NUBP2 | P4HB | Gene ID | 10101 | 5034 |
Gene name | nucleotide binding protein 2 | prolyl 4-hydroxylase subunit beta | |
Synonyms | CFD1|CIAO6|NBP 2|NUBP1 | CLCRP1|DSI|ERBA2L|GIT|P4Hbeta|PDI|PDIA1|PHDB|PO4DB|PO4HB|PROHB | |
Cytomap | 16p13.3 | 17q25.3 | |
Type of gene | protein-coding | protein-coding | |
Description | cytosolic Fe-S cluster assembly factor NUBP2homolog of yeast cytosolic Fe-S cluster deficient 1nucleotide binding protein 2 (MinD homolog, E. coli) | protein disulfide-isomerasecellular thyroid hormone-binding proteincollagen prolyl 4-hydroxylase betaglutathione-insulin transhydrogenasep55procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), beta polypeptideprolyl 4-hydroxyla | |
Modification date | 20200313 | 20200329 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000262302, ENST00000565987, ENST00000543305, ENST00000565134, ENST00000568706, ENST00000568610, | ENST00000331483, ENST00000576390, ENST00000439918, ENST00000472244, | |
Fusion gene scores | * DoF score | 3 X 1 X 2=6 | 18 X 16 X 10=2880 |
# samples | 2 | 21 | |
** MAII score | log2(2/6*10)=1.73696559416621 | log2(21/2880*10)=-3.77760757866355 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: NUBP2 [Title/Abstract] AND P4HB [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | NUBP2(1833037)-P4HB(79813462), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | P4HB | GO:0018401 | peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 7753822 |
Fusion gene breakpoints across NUBP2 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across P4HB (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | SKCM | TCGA-EB-A4OY-01A | NUBP2 | chr16 | 1833037 | + | P4HB | chr17 | 79813462 | - |
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Fusion Gene ORF analysis for NUBP2-P4HB |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000262302 | ENST00000331483 | NUBP2 | chr16 | 1833037 | + | P4HB | chr17 | 79813462 | - |
5CDS-intron | ENST00000262302 | ENST00000576390 | NUBP2 | chr16 | 1833037 | + | P4HB | chr17 | 79813462 | - |
5CDS-intron | ENST00000262302 | ENST00000439918 | NUBP2 | chr16 | 1833037 | + | P4HB | chr17 | 79813462 | - |
5CDS-5UTR | ENST00000262302 | ENST00000472244 | NUBP2 | chr16 | 1833037 | + | P4HB | chr17 | 79813462 | - |
5UTR-3CDS | ENST00000565987 | ENST00000331483 | NUBP2 | chr16 | 1833037 | + | P4HB | chr17 | 79813462 | - |
5UTR-intron | ENST00000565987 | ENST00000576390 | NUBP2 | chr16 | 1833037 | + | P4HB | chr17 | 79813462 | - |
5UTR-intron | ENST00000565987 | ENST00000439918 | NUBP2 | chr16 | 1833037 | + | P4HB | chr17 | 79813462 | - |
5UTR-5UTR | ENST00000565987 | ENST00000472244 | NUBP2 | chr16 | 1833037 | + | P4HB | chr17 | 79813462 | - |
5UTR-3CDS | ENST00000543305 | ENST00000331483 | NUBP2 | chr16 | 1833037 | + | P4HB | chr17 | 79813462 | - |
5UTR-intron | ENST00000543305 | ENST00000576390 | NUBP2 | chr16 | 1833037 | + | P4HB | chr17 | 79813462 | - |
5UTR-intron | ENST00000543305 | ENST00000439918 | NUBP2 | chr16 | 1833037 | + | P4HB | chr17 | 79813462 | - |
5UTR-5UTR | ENST00000543305 | ENST00000472244 | NUBP2 | chr16 | 1833037 | + | P4HB | chr17 | 79813462 | - |
In-frame | ENST00000565134 | ENST00000331483 | NUBP2 | chr16 | 1833037 | + | P4HB | chr17 | 79813462 | - |
5CDS-intron | ENST00000565134 | ENST00000576390 | NUBP2 | chr16 | 1833037 | + | P4HB | chr17 | 79813462 | - |
5CDS-intron | ENST00000565134 | ENST00000439918 | NUBP2 | chr16 | 1833037 | + | P4HB | chr17 | 79813462 | - |
5CDS-5UTR | ENST00000565134 | ENST00000472244 | NUBP2 | chr16 | 1833037 | + | P4HB | chr17 | 79813462 | - |
intron-3CDS | ENST00000568706 | ENST00000331483 | NUBP2 | chr16 | 1833037 | + | P4HB | chr17 | 79813462 | - |
intron-intron | ENST00000568706 | ENST00000576390 | NUBP2 | chr16 | 1833037 | + | P4HB | chr17 | 79813462 | - |
intron-intron | ENST00000568706 | ENST00000439918 | NUBP2 | chr16 | 1833037 | + | P4HB | chr17 | 79813462 | - |
intron-5UTR | ENST00000568706 | ENST00000472244 | NUBP2 | chr16 | 1833037 | + | P4HB | chr17 | 79813462 | - |
intron-3CDS | ENST00000568610 | ENST00000331483 | NUBP2 | chr16 | 1833037 | + | P4HB | chr17 | 79813462 | - |
intron-intron | ENST00000568610 | ENST00000576390 | NUBP2 | chr16 | 1833037 | + | P4HB | chr17 | 79813462 | - |
intron-intron | ENST00000568610 | ENST00000439918 | NUBP2 | chr16 | 1833037 | + | P4HB | chr17 | 79813462 | - |
intron-5UTR | ENST00000568610 | ENST00000472244 | NUBP2 | chr16 | 1833037 | + | P4HB | chr17 | 79813462 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000262302 | NUBP2 | chr16 | 1833037 | + | ENST00000331483 | P4HB | chr17 | 79813462 | - | 2164 | 136 | 1370 | 0 | 457 |
ENST00000565134 | NUBP2 | chr16 | 1833037 | + | ENST00000331483 | P4HB | chr17 | 79813462 | - | 2058 | 30 | 1264 | 2 | 421 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000262302 | ENST00000331483 | NUBP2 | chr16 | 1833037 | + | P4HB | chr17 | 79813462 | - | 0.002438789 | 0.9975612 |
ENST00000565134 | ENST00000331483 | NUBP2 | chr16 | 1833037 | + | P4HB | chr17 | 79813462 | - | 0.002254996 | 0.99774504 |
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Fusion Genomic Features for NUBP2-P4HB |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for NUBP2-P4HB |
Go to FGviewer for the breakpoints of chr16:1833037-chr17:79813462 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | P4HB | chr16:1833037 | chr17:79813462 | ENST00000331483 | 1 | 11 | 349_475 | 117.33333333333333 | 509.0 | Domain | Thioredoxin 2 | |
Tgene | P4HB | chr16:1833037 | chr17:79813462 | ENST00000331483 | 1 | 11 | 505_508 | 117.33333333333333 | 509.0 | Motif | Note=Prevents secretion from ER |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | NUBP2 | chr16:1833037 | chr17:79813462 | ENST00000262302 | + | 1 | 7 | 22_29 | 5.333333333333333 | 272.0 | Nucleotide binding | ATP |
Tgene | P4HB | chr16:1833037 | chr17:79813462 | ENST00000331483 | 1 | 11 | 18_134 | 117.33333333333333 | 509.0 | Domain | Thioredoxin 1 |
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Fusion Gene Sequence for NUBP2-P4HB |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000262302_ENST00000331483_TCGA-EB-A4OY-01A_NUBP2_chr16_1833037_+_P4HB_chr17_79813462_length(transcript)=2164nt_BP=136nt AAGAAGAGCCACGGGCGGGCACGCACTGCCCATTGGTTGGAAGGCCCTTCGCTCTAGCTGGGAGGCTGACGGCCCGCGGGCGTAAGCGGA CTGCAGCCGCGAGCTCCTGGAGGCGGCGGGATGGAGGCGGCGGCCGCTGGCAGAGAGGCTGATGACATCGTGAACTGGCTGAAGAAGCGC ACGGGCCCGGCTGCCACCACCCTGCCTGACGGCGCAGCTGCAGAGTCCTTGGTGGAGTCCAGCGAGGTGGCTGTCATCGGCTTCTTCAAG GACGTGGAGTCGGACTCTGCCAAGCAGTTTTTGCAGGCAGCAGAGGCCATCGATGACATACCATTTGGGATCACTTCCAACAGTGACGTG TTCTCCAAATACCAGCTCGACAAAGATGGGGTTGTCCTCTTTAAGAAGTTTGATGAAGGCCGGAACAACTTTGAAGGGGAGGTCACCAAG GAGAACCTGCTGGACTTTATCAAACACAACCAGCTGCCCCTTGTCATCGAGTTCACCGAGCAGACAGCCCCGAAGATTTTTGGAGGTGAA ATCAAGACTCACATCCTGCTGTTCTTGCCCAAGAGTGTGTCTGACTATGACGGCAAACTGAGCAACTTCAAAACAGCAGCCGAGAGCTTC AAGGGCAAGATCCTGTTCATCTTCATCGACAGCGACCACACCGACAACCAGCGCATCCTCGAGTTCTTTGGCCTGAAGAAGGAAGAGTGC CCGGCCGTGCGCCTCATCACCCTGGAGGAGGAGATGACCAAGTACAAGCCCGAATCGGAGGAGCTGACGGCAGAGAGGATCACAGAGTTC TGCCACCGCTTCCTGGAGGGCAAAATCAAGCCCCACCTGATGAGCCAGGAGCTGCCGGAGGACTGGGACAAGCAGCCTGTCAAGGTGCTT GTTGGGAAGAACTTTGAAGACGTGGCTTTTGATGAGAAAAAAAACGTCTTTGTGGAGTTCTATGCCCCATGGTGTGGTCACTGCAAACAG TTGGCTCCCATTTGGGATAAACTGGGAGAGACGTACAAGGACCATGAGAACATCGTCATCGCCAAGATGGACTCGACTGCCAACGAGGTG GAGGCCGTCAAAGTGCACAGCTTCCCCACACTCAAGTTCTTTCCTGCCAGTGCCGACAGGACGGTCATTGATTACAACGGGGAACGCACG CTGGATGGTTTTAAGAAATTCCTGGAGAGCGGTGGCCAGGATGGGGCAGGGGATGATGACGATCTCGAGGACCTGGAAGAAGCAGAGGAG CCAGACATGGAGGAAGACGATGATCAGAAAGCTGTGAAAGATGAACTGTAATACGCAAAGCCAGACCCGGGCGCTGCCGAGACCCCTCGG GGGCTGCACACCCAGCAGCAGCGCACGCCTCCGAAGCCTGCGGCCTCGCTTGAAGGAGGGCGTCGCCGGAAACCCAGGGAACCTCTCTGA AGTGACACCTCACCCCTACACACCGTCCGTTCACCCCCGTCTCTTCCTTCTGCTTTTCGGTTTTTGGAAAGGGATCCATCTCCAGGCAGC CCACCCTGGTGGGGCTTGTTTCCTGAAACCATGATGTACTTTTTCATACATGAGTCTGTCCAGAGTGCTTGCTACCGTGTTCGGAGTCTC GCTGCCTCCCTCCCGCGGGAGGTTTCTCCTCTTTTTGAAAATTCCGTCTGTGGGATTTTTAGACATTTTTCGACATCAGGGTATTTGTTC CACCTTGGCCAGGCCTCCTCGGAGAAGCTTGTCCCCCGTGTGGGAGGGACGGAGCCGGACTGGACATGGTCACTCAGTACCGCCTGCAGT GTCGCCATGACTGATCATGGCTCTTGCATTTTTGGGTAAATGGAGACTTCCGGATCCTGTCAGGGTGTCCCCCATGCCTGGAAGAGGAGC TGGTGGCTGCCAGCCCTGGGGCCCGGCACAGGCCTGGGCCTTCCCCTTCCCTCAAGCCAGGGCTCCTCCTCCTGTCGTGGGCTCATTGTG ACCACTGGCCTCTCTACAGCACGGCCTGTGGCCTGTTCAAGGCAGAACCACGACCCTTGACTCCCGGGTGGGGAGGTGGCCAAGGATGCT GGAGCTGAATCAGACGCTGACAGTTCTTCAGGCATTTCTATTTCACAATCGAATTGAACACATTGGCCAAATAAAGTTGAAATTTTACCA >In-frame_ENST00000262302_ENST00000331483_TCGA-EB-A4OY-01A_NUBP2_chr16_1833037_+_P4HB_chr17_79813462_length(amino acids)=457AA_start in transcript=1370_stop in transcript=0 MLLGVQPPRGLGSARVWLCVLQFIFHSFLIIVFLHVWLLCFFQVLEIVIIPCPILATALQEFLKTIQRAFPVVINDRPVGTGRKELECGE AVHFDGLHLVGSRVHLGDDDVLMVLVRLSQFIPNGSQLFAVTTPWGIELHKDVFFLIKSHVFKVLPNKHLDRLLVPVLRQLLAHQVGLDF ALQEAVAELCDPLCRQLLRFGLVLGHLLLQGDEAHGRALFLLQAKELEDALVVGVVAVDEDEQDLALEALGCCFEVAQFAVIVRHTLGQE QQDVSLDFTSKNLRGCLLGELDDKGQLVVFDKVQQVLLGDLPFKVVPAFIKLLKEDNPIFVELVFGEHVTVGSDPKWYVIDGLCCLQKLL GRVRLHVLEEADDSHLAGLHQGLCSCAVRQGGGSRARALLQPVHDVISLSASGRRLHPAASRSSRLQSAYARGPSASQLERRAFQPMGSA -------------------------------------------------------------- >In-frame_ENST00000565134_ENST00000331483_TCGA-EB-A4OY-01A_NUBP2_chr16_1833037_+_P4HB_chr17_79813462_length(transcript)=2058nt_BP=30nt CTGGAGGCGGCGGGATGGAGGCGGCGGCCGCTGGCAGAGAGGCTGATGACATCGTGAACTGGCTGAAGAAGCGCACGGGCCCGGCTGCCA CCACCCTGCCTGACGGCGCAGCTGCAGAGTCCTTGGTGGAGTCCAGCGAGGTGGCTGTCATCGGCTTCTTCAAGGACGTGGAGTCGGACT CTGCCAAGCAGTTTTTGCAGGCAGCAGAGGCCATCGATGACATACCATTTGGGATCACTTCCAACAGTGACGTGTTCTCCAAATACCAGC TCGACAAAGATGGGGTTGTCCTCTTTAAGAAGTTTGATGAAGGCCGGAACAACTTTGAAGGGGAGGTCACCAAGGAGAACCTGCTGGACT TTATCAAACACAACCAGCTGCCCCTTGTCATCGAGTTCACCGAGCAGACAGCCCCGAAGATTTTTGGAGGTGAAATCAAGACTCACATCC TGCTGTTCTTGCCCAAGAGTGTGTCTGACTATGACGGCAAACTGAGCAACTTCAAAACAGCAGCCGAGAGCTTCAAGGGCAAGATCCTGT TCATCTTCATCGACAGCGACCACACCGACAACCAGCGCATCCTCGAGTTCTTTGGCCTGAAGAAGGAAGAGTGCCCGGCCGTGCGCCTCA TCACCCTGGAGGAGGAGATGACCAAGTACAAGCCCGAATCGGAGGAGCTGACGGCAGAGAGGATCACAGAGTTCTGCCACCGCTTCCTGG AGGGCAAAATCAAGCCCCACCTGATGAGCCAGGAGCTGCCGGAGGACTGGGACAAGCAGCCTGTCAAGGTGCTTGTTGGGAAGAACTTTG AAGACGTGGCTTTTGATGAGAAAAAAAACGTCTTTGTGGAGTTCTATGCCCCATGGTGTGGTCACTGCAAACAGTTGGCTCCCATTTGGG ATAAACTGGGAGAGACGTACAAGGACCATGAGAACATCGTCATCGCCAAGATGGACTCGACTGCCAACGAGGTGGAGGCCGTCAAAGTGC ACAGCTTCCCCACACTCAAGTTCTTTCCTGCCAGTGCCGACAGGACGGTCATTGATTACAACGGGGAACGCACGCTGGATGGTTTTAAGA AATTCCTGGAGAGCGGTGGCCAGGATGGGGCAGGGGATGATGACGATCTCGAGGACCTGGAAGAAGCAGAGGAGCCAGACATGGAGGAAG ACGATGATCAGAAAGCTGTGAAAGATGAACTGTAATACGCAAAGCCAGACCCGGGCGCTGCCGAGACCCCTCGGGGGCTGCACACCCAGC AGCAGCGCACGCCTCCGAAGCCTGCGGCCTCGCTTGAAGGAGGGCGTCGCCGGAAACCCAGGGAACCTCTCTGAAGTGACACCTCACCCC TACACACCGTCCGTTCACCCCCGTCTCTTCCTTCTGCTTTTCGGTTTTTGGAAAGGGATCCATCTCCAGGCAGCCCACCCTGGTGGGGCT TGTTTCCTGAAACCATGATGTACTTTTTCATACATGAGTCTGTCCAGAGTGCTTGCTACCGTGTTCGGAGTCTCGCTGCCTCCCTCCCGC GGGAGGTTTCTCCTCTTTTTGAAAATTCCGTCTGTGGGATTTTTAGACATTTTTCGACATCAGGGTATTTGTTCCACCTTGGCCAGGCCT CCTCGGAGAAGCTTGTCCCCCGTGTGGGAGGGACGGAGCCGGACTGGACATGGTCACTCAGTACCGCCTGCAGTGTCGCCATGACTGATC ATGGCTCTTGCATTTTTGGGTAAATGGAGACTTCCGGATCCTGTCAGGGTGTCCCCCATGCCTGGAAGAGGAGCTGGTGGCTGCCAGCCC TGGGGCCCGGCACAGGCCTGGGCCTTCCCCTTCCCTCAAGCCAGGGCTCCTCCTCCTGTCGTGGGCTCATTGTGACCACTGGCCTCTCTA CAGCACGGCCTGTGGCCTGTTCAAGGCAGAACCACGACCCTTGACTCCCGGGTGGGGAGGTGGCCAAGGATGCTGGAGCTGAATCAGACG >In-frame_ENST00000565134_ENST00000331483_TCGA-EB-A4OY-01A_NUBP2_chr16_1833037_+_P4HB_chr17_79813462_length(amino acids)=421AA_start in transcript=1264_stop in transcript=2 MLLGVQPPRGLGSARVWLCVLQFIFHSFLIIVFLHVWLLCFFQVLEIVIIPCPILATALQEFLKTIQRAFPVVINDRPVGTGRKELECGE AVHFDGLHLVGSRVHLGDDDVLMVLVRLSQFIPNGSQLFAVTTPWGIELHKDVFFLIKSHVFKVLPNKHLDRLLVPVLRQLLAHQVGLDF ALQEAVAELCDPLCRQLLRFGLVLGHLLLQGDEAHGRALFLLQAKELEDALVVGVVAVDEDEQDLALEALGCCFEVAQFAVIVRHTLGQE QQDVSLDFTSKNLRGCLLGELDDKGQLVVFDKVQQVLLGDLPFKVVPAFIKLLKEDNPIFVELVFGEHVTVGSDPKWYVIDGLCCLQKLL -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for NUBP2-P4HB |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for NUBP2-P4HB |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for NUBP2-P4HB |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | P4HB | C4317154 | COLE-CARPENTER SYNDROME 1 | 2 | GENOMICS_ENGLAND;UNIPROT |
Tgene | P4HB | C0001787 | Osteoporosis, Age-Related | 1 | CTD_human |
Tgene | P4HB | C0019193 | Hepatitis, Toxic | 1 | CTD_human |
Tgene | P4HB | C0029434 | Osteogenesis Imperfecta | 1 | GENOMICS_ENGLAND |
Tgene | P4HB | C0029456 | Osteoporosis | 1 | CTD_human |
Tgene | P4HB | C0029459 | Osteoporosis, Senile | 1 | CTD_human |
Tgene | P4HB | C0033578 | Prostatic Neoplasms | 1 | CTD_human |
Tgene | P4HB | C0151744 | Myocardial Ischemia | 1 | CTD_human |
Tgene | P4HB | C0376358 | Malignant neoplasm of prostate | 1 | CTD_human |
Tgene | P4HB | C0751406 | Post-Traumatic Osteoporosis | 1 | CTD_human |
Tgene | P4HB | C0860207 | Drug-Induced Liver Disease | 1 | CTD_human |
Tgene | P4HB | C1262760 | Hepatitis, Drug-Induced | 1 | CTD_human |
Tgene | P4HB | C1846707 | SPINOCEREBELLAR ATAXIA 17 | 1 | CTD_human |
Tgene | P4HB | C1862178 | Cole Carpenter syndrome | 1 | CTD_human;GENOMICS_ENGLAND;ORPHANET |
Tgene | P4HB | C3658290 | Drug-Induced Acute Liver Injury | 1 | CTD_human |
Tgene | P4HB | C4277682 | Chemical and Drug Induced Liver Injury | 1 | CTD_human |
Tgene | P4HB | C4279912 | Chemically-Induced Liver Toxicity | 1 | CTD_human |