|
Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:OTUB1-IRF7 (FusionGDB2 ID:61556) |
Fusion Gene Summary for OTUB1-IRF7 |
Fusion gene summary |
Fusion gene information | Fusion gene name: OTUB1-IRF7 | Fusion gene ID: 61556 | Hgene | Tgene | Gene symbol | OTUB1 | IRF7 | Gene ID | 55611 | 3665 |
Gene name | OTU deubiquitinase, ubiquitin aldehyde binding 1 | interferon regulatory factor 7 | |
Synonyms | HSPC263|OTB1|OTU1 | IMD39|IRF-7|IRF-7H|IRF7A|IRF7B|IRF7C|IRF7H | |
Cytomap | 11q13.1 | 11p15.5 | |
Type of gene | protein-coding | protein-coding | |
Description | ubiquitin thioesterase OTUB1OTU domain, ubiquitin aldehyde binding 1OTU domain-containing ubiquitin aldehyde-binding protein 1OTU-domain Ubal-binding 1deubiquitinating enzyme OTUB1otubain-1ubiquitin-specific protease otubain 1ubiquitin-specific-pro | interferon regulatory factor 7interferon regulatory factor 7G isoforminterferon regulatory factor-7H | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | Q92985 | |
Ensembl transtripts involved in fusion gene | ENST00000541478, ENST00000535715, ENST00000422031, ENST00000428192, ENST00000538426, ENST00000543004, ENST00000536443, ENST00000543988, | ENST00000525445, ENST00000348655, ENST00000397566, ENST00000397570, ENST00000397574, ENST00000397562, ENST00000330243, | |
Fusion gene scores | * DoF score | 10 X 8 X 7=560 | 2 X 2 X 2=8 |
# samples | 10 | 2 | |
** MAII score | log2(10/560*10)=-2.48542682717024 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(2/8*10)=1.32192809488736 | |
Context | PubMed: OTUB1 [Title/Abstract] AND IRF7 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | OTUB1(63764120)-IRF7(612800), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | OTUB1-IRF7 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. OTUB1-IRF7 seems lost the major protein functional domain in Tgene partner, which is a transcription factor due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | OTUB1 | GO:0006974 | cellular response to DNA damage stimulus | 20725033 |
Hgene | OTUB1 | GO:0071108 | protein K48-linked deubiquitination | 18954305|19211026|23827681 |
Hgene | OTUB1 | GO:1901315 | negative regulation of histone H2A K63-linked ubiquitination | 20725033 |
Tgene | IRF7 | GO:0002819 | regulation of adaptive immune response | 17404045 |
Tgene | IRF7 | GO:0032727 | positive regulation of interferon-alpha production | 16127453 |
Tgene | IRF7 | GO:0045944 | positive regulation of transcription by RNA polymerase II | 16127453|17404045 |
Tgene | IRF7 | GO:0051607 | defense response to virus | 21478870 |
Fusion gene breakpoints across OTUB1 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across IRF7 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | Non-Cancer | 61N | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
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Fusion Gene ORF analysis for OTUB1-IRF7 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-3CDS | ENST00000541478 | ENST00000525445 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
intron-3CDS | ENST00000541478 | ENST00000348655 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
intron-3CDS | ENST00000541478 | ENST00000397566 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
intron-3CDS | ENST00000541478 | ENST00000397570 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
intron-3CDS | ENST00000541478 | ENST00000397574 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
intron-3CDS | ENST00000541478 | ENST00000397562 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
intron-3CDS | ENST00000541478 | ENST00000330243 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000535715 | ENST00000525445 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000535715 | ENST00000348655 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000535715 | ENST00000397566 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
In-frame | ENST00000535715 | ENST00000397570 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
In-frame | ENST00000535715 | ENST00000397574 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000535715 | ENST00000397562 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000535715 | ENST00000330243 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000422031 | ENST00000525445 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000422031 | ENST00000348655 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000422031 | ENST00000397566 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
In-frame | ENST00000422031 | ENST00000397570 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
In-frame | ENST00000422031 | ENST00000397574 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000422031 | ENST00000397562 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000422031 | ENST00000330243 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000428192 | ENST00000525445 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000428192 | ENST00000348655 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000428192 | ENST00000397566 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
In-frame | ENST00000428192 | ENST00000397570 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
In-frame | ENST00000428192 | ENST00000397574 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000428192 | ENST00000397562 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000428192 | ENST00000330243 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000538426 | ENST00000525445 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000538426 | ENST00000348655 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000538426 | ENST00000397566 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
In-frame | ENST00000538426 | ENST00000397570 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
In-frame | ENST00000538426 | ENST00000397574 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000538426 | ENST00000397562 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000538426 | ENST00000330243 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000543004 | ENST00000525445 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000543004 | ENST00000348655 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000543004 | ENST00000397566 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
In-frame | ENST00000543004 | ENST00000397570 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
In-frame | ENST00000543004 | ENST00000397574 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000543004 | ENST00000397562 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000543004 | ENST00000330243 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
intron-3CDS | ENST00000536443 | ENST00000525445 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
intron-3CDS | ENST00000536443 | ENST00000348655 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
intron-3CDS | ENST00000536443 | ENST00000397566 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
intron-3CDS | ENST00000536443 | ENST00000397570 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
intron-3CDS | ENST00000536443 | ENST00000397574 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
intron-3CDS | ENST00000536443 | ENST00000397562 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
intron-3CDS | ENST00000536443 | ENST00000330243 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000543988 | ENST00000525445 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000543988 | ENST00000348655 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000543988 | ENST00000397566 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
In-frame | ENST00000543988 | ENST00000397570 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
In-frame | ENST00000543988 | ENST00000397574 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000543988 | ENST00000397562 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
Frame-shift | ENST00000543988 | ENST00000330243 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000535715 | OTUB1 | chr11 | 63764120 | + | ENST00000397570 | IRF7 | chr11 | 612800 | - | 1036 | 790 | 410 | 820 | 136 |
ENST00000535715 | OTUB1 | chr11 | 63764120 | + | ENST00000397574 | IRF7 | chr11 | 612800 | - | 1032 | 790 | 410 | 820 | 136 |
ENST00000422031 | OTUB1 | chr11 | 63764120 | + | ENST00000397570 | IRF7 | chr11 | 612800 | - | 907 | 661 | 11 | 691 | 226 |
ENST00000422031 | OTUB1 | chr11 | 63764120 | + | ENST00000397574 | IRF7 | chr11 | 612800 | - | 903 | 661 | 11 | 691 | 226 |
ENST00000428192 | OTUB1 | chr11 | 63764120 | + | ENST00000397570 | IRF7 | chr11 | 612800 | - | 907 | 661 | 11 | 691 | 226 |
ENST00000428192 | OTUB1 | chr11 | 63764120 | + | ENST00000397574 | IRF7 | chr11 | 612800 | - | 903 | 661 | 11 | 691 | 226 |
ENST00000538426 | OTUB1 | chr11 | 63764120 | + | ENST00000397570 | IRF7 | chr11 | 612800 | - | 628 | 382 | 2 | 412 | 136 |
ENST00000538426 | OTUB1 | chr11 | 63764120 | + | ENST00000397574 | IRF7 | chr11 | 612800 | - | 624 | 382 | 2 | 412 | 136 |
ENST00000543004 | OTUB1 | chr11 | 63764120 | + | ENST00000397570 | IRF7 | chr11 | 612800 | - | 622 | 376 | 11 | 406 | 131 |
ENST00000543004 | OTUB1 | chr11 | 63764120 | + | ENST00000397574 | IRF7 | chr11 | 612800 | - | 618 | 376 | 11 | 406 | 131 |
ENST00000543988 | OTUB1 | chr11 | 63764120 | + | ENST00000397570 | IRF7 | chr11 | 612800 | - | 723 | 477 | 160 | 507 | 115 |
ENST00000543988 | OTUB1 | chr11 | 63764120 | + | ENST00000397574 | IRF7 | chr11 | 612800 | - | 719 | 477 | 160 | 507 | 115 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000535715 | ENST00000397570 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - | 0.008970708 | 0.99102926 |
ENST00000535715 | ENST00000397574 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - | 0.009510377 | 0.9904896 |
ENST00000422031 | ENST00000397570 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - | 0.005231072 | 0.994769 |
ENST00000422031 | ENST00000397574 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - | 0.005669701 | 0.9943303 |
ENST00000428192 | ENST00000397570 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - | 0.005231072 | 0.994769 |
ENST00000428192 | ENST00000397574 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - | 0.005669701 | 0.9943303 |
ENST00000538426 | ENST00000397570 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - | 0.004402129 | 0.9955979 |
ENST00000538426 | ENST00000397574 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - | 0.004432082 | 0.99556786 |
ENST00000543004 | ENST00000397570 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - | 0.001735511 | 0.9982645 |
ENST00000543004 | ENST00000397574 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - | 0.001894861 | 0.99810517 |
ENST00000543988 | ENST00000397570 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - | 0.12560132 | 0.8743987 |
ENST00000543988 | ENST00000397574 | OTUB1 | chr11 | 63764120 | + | IRF7 | chr11 | 612800 | - | 0.14298883 | 0.8570112 |
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Fusion Genomic Features for OTUB1-IRF7 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for OTUB1-IRF7 |
Go to FGviewer for the breakpoints of chr11:63764120-chr11:612800 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | IRF7 |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Key transcriptional regulator of type I interferon (IFN)-dependent immune responses and plays a critical role in the innate immune response against DNA and RNA viruses. Regulates the transcription of type I IFN genes (IFN-alpha and IFN-beta) and IFN-stimulated genes (ISG) by binding to an interferon-stimulated response element (ISRE) in their promoters (PubMed:17574024, PubMed:32972995). Can efficiently activate both the IFN-beta (IFNB) and the IFN-alpha (IFNA) genes and mediate their induction via both the virus-activated, MyD88-independent pathway and the TLR-activated, MyD88-dependent pathway. Induces transcription of ubiquitin hydrolase USP25 mRNA in response to lipopolysaccharide (LPS) or viral infection in a type I IFN-dependent manner (By similarity). Required during both the early and late phases of the IFN gene induction but is more critical for the late than for the early phase. Exists in an inactive form in the cytoplasm of uninfected cells and following viral infection, double-stranded RNA (dsRNA), or toll-like receptor (TLR) signaling, becomes phosphorylated by IKBKE and TBK1 kinases. This induces a conformational change, leading to its dimerization and nuclear localization where along with other coactivators it can activate transcription of the type I IFN and ISG genes. Can also play a role in regulating adaptive immune responses by inducing PSMB9/LMP2 expression, either directly or through induction of IRF1. Binds to the Q promoter (Qp) of EBV nuclear antigen 1 a (EBNA1) and may play a role in the regulation of EBV latency. Can activate distinct gene expression programs in macrophages and regulate the anti-tumor properties of primary macrophages (By similarity) (PubMed:11073981, PubMed:12374802, PubMed:15361868, PubMed:17404045). {ECO:0000250|UniProtKB:P70434, ECO:0000269|PubMed:11073981, ECO:0000269|PubMed:12374802, ECO:0000269|PubMed:15361868, ECO:0000269|PubMed:17404045, ECO:0000269|PubMed:17574024, ECO:0000269|PubMed:32972995}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | OTUB1 | chr11:63764120 | chr11:612800 | ENST00000428192 | + | 5 | 8 | 80_271 | 112.66666666666667 | 272.0 | Domain | OTU |
Hgene | OTUB1 | chr11:63764120 | chr11:612800 | ENST00000538426 | + | 4 | 7 | 80_271 | 112.66666666666667 | 272.0 | Domain | OTU |
Hgene | OTUB1 | chr11:63764120 | chr11:612800 | ENST00000428192 | + | 5 | 8 | 130_138 | 112.66666666666667 | 272.0 | Region | Ubiquitin-conjugating enzyme E2 binding |
Hgene | OTUB1 | chr11:63764120 | chr11:612800 | ENST00000428192 | + | 5 | 8 | 169_177 | 112.66666666666667 | 272.0 | Region | Ubiquitin-conjugating enzyme E2 binding |
Hgene | OTUB1 | chr11:63764120 | chr11:612800 | ENST00000428192 | + | 5 | 8 | 189_195 | 112.66666666666667 | 272.0 | Region | Free ubiquitin binding |
Hgene | OTUB1 | chr11:63764120 | chr11:612800 | ENST00000428192 | + | 5 | 8 | 206_213 | 112.66666666666667 | 272.0 | Region | Ubiquitin-conjugating enzyme E2 binding |
Hgene | OTUB1 | chr11:63764120 | chr11:612800 | ENST00000428192 | + | 5 | 8 | 214_221 | 112.66666666666667 | 272.0 | Region | Free ubiquitin binding |
Hgene | OTUB1 | chr11:63764120 | chr11:612800 | ENST00000428192 | + | 5 | 8 | 245_251 | 112.66666666666667 | 272.0 | Region | Free ubiquitin binding |
Hgene | OTUB1 | chr11:63764120 | chr11:612800 | ENST00000538426 | + | 4 | 7 | 130_138 | 112.66666666666667 | 272.0 | Region | Ubiquitin-conjugating enzyme E2 binding |
Hgene | OTUB1 | chr11:63764120 | chr11:612800 | ENST00000538426 | + | 4 | 7 | 169_177 | 112.66666666666667 | 272.0 | Region | Ubiquitin-conjugating enzyme E2 binding |
Hgene | OTUB1 | chr11:63764120 | chr11:612800 | ENST00000538426 | + | 4 | 7 | 189_195 | 112.66666666666667 | 272.0 | Region | Free ubiquitin binding |
Hgene | OTUB1 | chr11:63764120 | chr11:612800 | ENST00000538426 | + | 4 | 7 | 206_213 | 112.66666666666667 | 272.0 | Region | Ubiquitin-conjugating enzyme E2 binding |
Hgene | OTUB1 | chr11:63764120 | chr11:612800 | ENST00000538426 | + | 4 | 7 | 214_221 | 112.66666666666667 | 272.0 | Region | Free ubiquitin binding |
Hgene | OTUB1 | chr11:63764120 | chr11:612800 | ENST00000538426 | + | 4 | 7 | 245_251 | 112.66666666666667 | 272.0 | Region | Free ubiquitin binding |
Tgene | IRF7 | chr11:63764120 | chr11:612800 | ENST00000330243 | 8 | 10 | 11_126 | 465.0 | 517.0 | DNA binding | IRF tryptophan pentad repeat | |
Tgene | IRF7 | chr11:63764120 | chr11:612800 | ENST00000348655 | 7 | 9 | 11_126 | 423.0 | 475.0 | DNA binding | IRF tryptophan pentad repeat | |
Tgene | IRF7 | chr11:63764120 | chr11:612800 | ENST00000397566 | 7 | 9 | 11_126 | 465.0 | 517.0 | DNA binding | IRF tryptophan pentad repeat | |
Tgene | IRF7 | chr11:63764120 | chr11:612800 | ENST00000397570 | 8 | 10 | 11_126 | 423.0 | 475.0 | DNA binding | IRF tryptophan pentad repeat | |
Tgene | IRF7 | chr11:63764120 | chr11:612800 | ENST00000397574 | 9 | 11 | 11_126 | 452.0 | 504.0 | DNA binding | IRF tryptophan pentad repeat |
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Fusion Gene Sequence for OTUB1-IRF7 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000535715_ENST00000397570_61N_OTUB1_chr11_63764120_+_IRF7_chr11_612800_length(transcript)=1036nt_BP=790nt GTCAGATGCTGCTCCGCACTGCAGCTATGGTCGCATGCAGTGCCTGCCGAAGCCCGCAGCAGGAATGCTGCCTTCGGTGATTTTAATTTC ACTTTTCTACTTCTCTCAATAACAAAATCCGCGTTTCAAACTCCAGGGAAAAGAAAACGGAATTGGCTCCAGGAGGATCTGCAATCACCA CCGGGAACTTTGGGAGGCTGGGAAGATGGAGCCAAACCAATGTGTGGGGTGGAGGTGCGGATCTGGGGCGGCCGGCCTCTCCTACAGGTC TCAGGTCCGCAGGCCTGGCGTGCCAGCACCTGCCACGGGACTGGAAGCCCATTCCTTGACAACGCCTAAGGGGATCCCGTTGCTAGGGCT GTTGCCAAGGCGGGGCAACGAGGAGGGGCTCGCTTCCGGGAGGACGGCAATTGGCAACCCGGAAGCGGTCGGTAGTGCGGCGCTGTTTAA AGATGGCGGCGGAGGAACCTCAGCAGCAGAAGCAGGAGCCGCTGGGCAGCGACTCCGAAGGTGTTAACTGTCTGGCCTATGATGAAGCCA TCATGGCTCAGCAGGACCGAATTCAGCAAGAGATTGCTGTGCAGAACCCTCTGGTGTCAGAGCGGCTGGAGCTCTCGGTCCTATACAAGG AGTATGCTGAAGATGACAACATCTATCAACAGAAGATCAAGGACCTCCACAAAAAGTACTCGTACATCCGCAAGACCAGGCCTGACGGCA ACTGTTTCTATCGGGCTTTCGGATTCTCCCACTTGGAGGCACTGCTGGATGACAGCAAGGAGTTGCAGCGCTGGAACCCTGGCTGTGCCG AGTGCACCTAGAGGGCACGCAGCGTGAGGGTGTGTCTTCCCTGGATAGCAGCAGCCTCAGCCTCTGCCTGTCCAGCGCCAACAGCCTCTA TGACGACATCGAGTGCTTCCTTATGGAGCTGGAGCAGCCCGCCTAGAACCCAGTCTAATGAGAACTCCAGAAAGCTGGAGCAGCCCACCT >In-frame_ENST00000535715_ENST00000397570_61N_OTUB1_chr11_63764120_+_IRF7_chr11_612800_length(amino acids)=136AA_start in transcript=410_stop in transcript=820 MATRKRSVVRRCLKMAAEEPQQQKQEPLGSDSEGVNCLAYDEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLH -------------------------------------------------------------- >In-frame_ENST00000535715_ENST00000397574_61N_OTUB1_chr11_63764120_+_IRF7_chr11_612800_length(transcript)=1032nt_BP=790nt GTCAGATGCTGCTCCGCACTGCAGCTATGGTCGCATGCAGTGCCTGCCGAAGCCCGCAGCAGGAATGCTGCCTTCGGTGATTTTAATTTC ACTTTTCTACTTCTCTCAATAACAAAATCCGCGTTTCAAACTCCAGGGAAAAGAAAACGGAATTGGCTCCAGGAGGATCTGCAATCACCA CCGGGAACTTTGGGAGGCTGGGAAGATGGAGCCAAACCAATGTGTGGGGTGGAGGTGCGGATCTGGGGCGGCCGGCCTCTCCTACAGGTC TCAGGTCCGCAGGCCTGGCGTGCCAGCACCTGCCACGGGACTGGAAGCCCATTCCTTGACAACGCCTAAGGGGATCCCGTTGCTAGGGCT GTTGCCAAGGCGGGGCAACGAGGAGGGGCTCGCTTCCGGGAGGACGGCAATTGGCAACCCGGAAGCGGTCGGTAGTGCGGCGCTGTTTAA AGATGGCGGCGGAGGAACCTCAGCAGCAGAAGCAGGAGCCGCTGGGCAGCGACTCCGAAGGTGTTAACTGTCTGGCCTATGATGAAGCCA TCATGGCTCAGCAGGACCGAATTCAGCAAGAGATTGCTGTGCAGAACCCTCTGGTGTCAGAGCGGCTGGAGCTCTCGGTCCTATACAAGG AGTATGCTGAAGATGACAACATCTATCAACAGAAGATCAAGGACCTCCACAAAAAGTACTCGTACATCCGCAAGACCAGGCCTGACGGCA ACTGTTTCTATCGGGCTTTCGGATTCTCCCACTTGGAGGCACTGCTGGATGACAGCAAGGAGTTGCAGCGCTGGAACCCTGGCTGTGCCG AGTGCACCTAGAGGGCACGCAGCGTGAGGGTGTGTCTTCCCTGGATAGCAGCAGCCTCAGCCTCTGCCTGTCCAGCGCCAACAGCCTCTA TGACGACATCGAGTGCTTCCTTATGGAGCTGGAGCAGCCCGCCTAGAACCCAGTCTAATGAGAACTCCAGAAAGCTGGAGCAGCCCACCT >In-frame_ENST00000535715_ENST00000397574_61N_OTUB1_chr11_63764120_+_IRF7_chr11_612800_length(amino acids)=136AA_start in transcript=410_stop in transcript=820 MATRKRSVVRRCLKMAAEEPQQQKQEPLGSDSEGVNCLAYDEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLH -------------------------------------------------------------- >In-frame_ENST00000422031_ENST00000397570_61N_OTUB1_chr11_63764120_+_IRF7_chr11_612800_length(transcript)=907nt_BP=661nt GCTGCTCCGCACTGCAGCTATGGTCGCATGCAGTGCCTGCCGAAGCCCGCAGCAGGAATGCTGCCTTCGGTGATTTTAATTTCACTTTTC TACTTCTCTCAATAACAAAATCCGCGTTTCAAACTCCAGGGAAAAGAAAACGGAATTGGCTCCAGGAGGATCTGCAATCACCACCGGGAA CTTTGGGAGGCTGGGAAGATGGAGCCAAACCAATGTGTGGGGTGGAGGGCTGTTGCCAAGGCGGGGCAACGAGGAGGGGCTCGCTTCCGG GAGGACGGCAATTGGCAACCCGGAAGCGGTCGGTAGTGCGGCGCTGTTTAAAGATGGCGGCGGAGGAACCTCAGCAGCAGAAGCAGGAGC CGCTGGGCAGCGACTCCGAAGGTGTTAACTGTCTGGCCTATGATGAAGCCATCATGGCTCAGCAGGACCGAATTCAGCAAGAGATTGCTG TGCAGAACCCTCTGGTGTCAGAGCGGCTGGAGCTCTCGGTCCTATACAAGGAGTATGCTGAAGATGACAACATCTATCAACAGAAGATCA AGGACCTCCACAAAAAGTACTCGTACATCCGCAAGACCAGGCCTGACGGCAACTGTTTCTATCGGGCTTTCGGATTCTCCCACTTGGAGG CACTGCTGGATGACAGCAAGGAGTTGCAGCGCTGGAACCCTGGCTGTGCCGAGTGCACCTAGAGGGCACGCAGCGTGAGGGTGTGTCTTC CCTGGATAGCAGCAGCCTCAGCCTCTGCCTGTCCAGCGCCAACAGCCTCTATGACGACATCGAGTGCTTCCTTATGGAGCTGGAGCAGCC CGCCTAGAACCCAGTCTAATGAGAACTCCAGAAAGCTGGAGCAGCCCACCTAGAGCTGGCCGCGGCCGCCCAGTCTAATAAAAAGAACTC >In-frame_ENST00000422031_ENST00000397570_61N_OTUB1_chr11_63764120_+_IRF7_chr11_612800_length(amino acids)=226AA_start in transcript=11_stop in transcript=691 MQLWSHAVPAEARSRNAAFGDFNFTFLLLSITKSAFQTPGKRKRNWLQEDLQSPPGTLGGWEDGAKPMCGVEGCCQGGATRRGSLPGGRQ LATRKRSVVRRCLKMAAEEPQQQKQEPLGSDSEGVNCLAYDEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLH -------------------------------------------------------------- >In-frame_ENST00000422031_ENST00000397574_61N_OTUB1_chr11_63764120_+_IRF7_chr11_612800_length(transcript)=903nt_BP=661nt GCTGCTCCGCACTGCAGCTATGGTCGCATGCAGTGCCTGCCGAAGCCCGCAGCAGGAATGCTGCCTTCGGTGATTTTAATTTCACTTTTC TACTTCTCTCAATAACAAAATCCGCGTTTCAAACTCCAGGGAAAAGAAAACGGAATTGGCTCCAGGAGGATCTGCAATCACCACCGGGAA CTTTGGGAGGCTGGGAAGATGGAGCCAAACCAATGTGTGGGGTGGAGGGCTGTTGCCAAGGCGGGGCAACGAGGAGGGGCTCGCTTCCGG GAGGACGGCAATTGGCAACCCGGAAGCGGTCGGTAGTGCGGCGCTGTTTAAAGATGGCGGCGGAGGAACCTCAGCAGCAGAAGCAGGAGC CGCTGGGCAGCGACTCCGAAGGTGTTAACTGTCTGGCCTATGATGAAGCCATCATGGCTCAGCAGGACCGAATTCAGCAAGAGATTGCTG TGCAGAACCCTCTGGTGTCAGAGCGGCTGGAGCTCTCGGTCCTATACAAGGAGTATGCTGAAGATGACAACATCTATCAACAGAAGATCA AGGACCTCCACAAAAAGTACTCGTACATCCGCAAGACCAGGCCTGACGGCAACTGTTTCTATCGGGCTTTCGGATTCTCCCACTTGGAGG CACTGCTGGATGACAGCAAGGAGTTGCAGCGCTGGAACCCTGGCTGTGCCGAGTGCACCTAGAGGGCACGCAGCGTGAGGGTGTGTCTTC CCTGGATAGCAGCAGCCTCAGCCTCTGCCTGTCCAGCGCCAACAGCCTCTATGACGACATCGAGTGCTTCCTTATGGAGCTGGAGCAGCC CGCCTAGAACCCAGTCTAATGAGAACTCCAGAAAGCTGGAGCAGCCCACCTAGAGCTGGCCGCGGCCGCCCAGTCTAATAAAAAGAACTC >In-frame_ENST00000422031_ENST00000397574_61N_OTUB1_chr11_63764120_+_IRF7_chr11_612800_length(amino acids)=226AA_start in transcript=11_stop in transcript=691 MQLWSHAVPAEARSRNAAFGDFNFTFLLLSITKSAFQTPGKRKRNWLQEDLQSPPGTLGGWEDGAKPMCGVEGCCQGGATRRGSLPGGRQ LATRKRSVVRRCLKMAAEEPQQQKQEPLGSDSEGVNCLAYDEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLH -------------------------------------------------------------- >In-frame_ENST00000428192_ENST00000397570_61N_OTUB1_chr11_63764120_+_IRF7_chr11_612800_length(transcript)=907nt_BP=661nt GCTGCTCCGCACTGCAGCTATGGTCGCATGCAGTGCCTGCCGAAGCCCGCAGCAGGAATGCTGCCTTCGGTGATTTTAATTTCACTTTTC TACTTCTCTCAATAACAAAATCCGCGTTTCAAACTCCAGGGAAAAGAAAACGGAATTGGCTCCAGGAGGATCTGCAATCACCACCGGGAA CTTTGGGAGGCTGGGAAGATGGAGCCAAACCAATGTGTGGGGTGGAGGGCTGTTGCCAAGGCGGGGCAACGAGGAGGGGCTCGCTTCCGG GAGGACGGCAATTGGCAACCCGGAAGCGGTCGGTAGTGCGGCGCTGTTTAAAGATGGCGGCGGAGGAACCTCAGCAGCAGAAGCAGGAGC CGCTGGGCAGCGACTCCGAAGGTGTTAACTGTCTGGCCTATGATGAAGCCATCATGGCTCAGCAGGACCGAATTCAGCAAGAGATTGCTG TGCAGAACCCTCTGGTGTCAGAGCGGCTGGAGCTCTCGGTCCTATACAAGGAGTATGCTGAAGATGACAACATCTATCAACAGAAGATCA AGGACCTCCACAAAAAGTACTCGTACATCCGCAAGACCAGGCCTGACGGCAACTGTTTCTATCGGGCTTTCGGATTCTCCCACTTGGAGG CACTGCTGGATGACAGCAAGGAGTTGCAGCGCTGGAACCCTGGCTGTGCCGAGTGCACCTAGAGGGCACGCAGCGTGAGGGTGTGTCTTC CCTGGATAGCAGCAGCCTCAGCCTCTGCCTGTCCAGCGCCAACAGCCTCTATGACGACATCGAGTGCTTCCTTATGGAGCTGGAGCAGCC CGCCTAGAACCCAGTCTAATGAGAACTCCAGAAAGCTGGAGCAGCCCACCTAGAGCTGGCCGCGGCCGCCCAGTCTAATAAAAAGAACTC >In-frame_ENST00000428192_ENST00000397570_61N_OTUB1_chr11_63764120_+_IRF7_chr11_612800_length(amino acids)=226AA_start in transcript=11_stop in transcript=691 MQLWSHAVPAEARSRNAAFGDFNFTFLLLSITKSAFQTPGKRKRNWLQEDLQSPPGTLGGWEDGAKPMCGVEGCCQGGATRRGSLPGGRQ LATRKRSVVRRCLKMAAEEPQQQKQEPLGSDSEGVNCLAYDEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLH -------------------------------------------------------------- >In-frame_ENST00000428192_ENST00000397574_61N_OTUB1_chr11_63764120_+_IRF7_chr11_612800_length(transcript)=903nt_BP=661nt GCTGCTCCGCACTGCAGCTATGGTCGCATGCAGTGCCTGCCGAAGCCCGCAGCAGGAATGCTGCCTTCGGTGATTTTAATTTCACTTTTC TACTTCTCTCAATAACAAAATCCGCGTTTCAAACTCCAGGGAAAAGAAAACGGAATTGGCTCCAGGAGGATCTGCAATCACCACCGGGAA CTTTGGGAGGCTGGGAAGATGGAGCCAAACCAATGTGTGGGGTGGAGGGCTGTTGCCAAGGCGGGGCAACGAGGAGGGGCTCGCTTCCGG GAGGACGGCAATTGGCAACCCGGAAGCGGTCGGTAGTGCGGCGCTGTTTAAAGATGGCGGCGGAGGAACCTCAGCAGCAGAAGCAGGAGC CGCTGGGCAGCGACTCCGAAGGTGTTAACTGTCTGGCCTATGATGAAGCCATCATGGCTCAGCAGGACCGAATTCAGCAAGAGATTGCTG TGCAGAACCCTCTGGTGTCAGAGCGGCTGGAGCTCTCGGTCCTATACAAGGAGTATGCTGAAGATGACAACATCTATCAACAGAAGATCA AGGACCTCCACAAAAAGTACTCGTACATCCGCAAGACCAGGCCTGACGGCAACTGTTTCTATCGGGCTTTCGGATTCTCCCACTTGGAGG CACTGCTGGATGACAGCAAGGAGTTGCAGCGCTGGAACCCTGGCTGTGCCGAGTGCACCTAGAGGGCACGCAGCGTGAGGGTGTGTCTTC CCTGGATAGCAGCAGCCTCAGCCTCTGCCTGTCCAGCGCCAACAGCCTCTATGACGACATCGAGTGCTTCCTTATGGAGCTGGAGCAGCC CGCCTAGAACCCAGTCTAATGAGAACTCCAGAAAGCTGGAGCAGCCCACCTAGAGCTGGCCGCGGCCGCCCAGTCTAATAAAAAGAACTC >In-frame_ENST00000428192_ENST00000397574_61N_OTUB1_chr11_63764120_+_IRF7_chr11_612800_length(amino acids)=226AA_start in transcript=11_stop in transcript=691 MQLWSHAVPAEARSRNAAFGDFNFTFLLLSITKSAFQTPGKRKRNWLQEDLQSPPGTLGGWEDGAKPMCGVEGCCQGGATRRGSLPGGRQ LATRKRSVVRRCLKMAAEEPQQQKQEPLGSDSEGVNCLAYDEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLH -------------------------------------------------------------- >In-frame_ENST00000538426_ENST00000397570_61N_OTUB1_chr11_63764120_+_IRF7_chr11_612800_length(transcript)=628nt_BP=382nt AATTGGCAACCCGGAAGCGGTCGGTAGTGCGGCGCTGTTTAAAGATGGCGGCGGAGGAACCTCAGCAGCAGAAGCAGGAGCCGCTGGGCA GCGACTCCGAAGGTGTTAACTGTCTGGCCTATGATGAAGCCATCATGGCTCAGCAGGACCGAATTCAGCAAGAGATTGCTGTGCAGAACC CTCTGGTGTCAGAGCGGCTGGAGCTCTCGGTCCTATACAAGGAGTATGCTGAAGATGACAACATCTATCAACAGAAGATCAAGGACCTCC ACAAAAAGTACTCGTACATCCGCAAGACCAGGCCTGACGGCAACTGTTTCTATCGGGCTTTCGGATTCTCCCACTTGGAGGCACTGCTGG ATGACAGCAAGGAGTTGCAGCGCTGGAACCCTGGCTGTGCCGAGTGCACCTAGAGGGCACGCAGCGTGAGGGTGTGTCTTCCCTGGATAG CAGCAGCCTCAGCCTCTGCCTGTCCAGCGCCAACAGCCTCTATGACGACATCGAGTGCTTCCTTATGGAGCTGGAGCAGCCCGCCTAGAA >In-frame_ENST00000538426_ENST00000397570_61N_OTUB1_chr11_63764120_+_IRF7_chr11_612800_length(amino acids)=136AA_start in transcript=2_stop in transcript=412 LATRKRSVVRRCLKMAAEEPQQQKQEPLGSDSEGVNCLAYDEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLH -------------------------------------------------------------- >In-frame_ENST00000538426_ENST00000397574_61N_OTUB1_chr11_63764120_+_IRF7_chr11_612800_length(transcript)=624nt_BP=382nt AATTGGCAACCCGGAAGCGGTCGGTAGTGCGGCGCTGTTTAAAGATGGCGGCGGAGGAACCTCAGCAGCAGAAGCAGGAGCCGCTGGGCA GCGACTCCGAAGGTGTTAACTGTCTGGCCTATGATGAAGCCATCATGGCTCAGCAGGACCGAATTCAGCAAGAGATTGCTGTGCAGAACC CTCTGGTGTCAGAGCGGCTGGAGCTCTCGGTCCTATACAAGGAGTATGCTGAAGATGACAACATCTATCAACAGAAGATCAAGGACCTCC ACAAAAAGTACTCGTACATCCGCAAGACCAGGCCTGACGGCAACTGTTTCTATCGGGCTTTCGGATTCTCCCACTTGGAGGCACTGCTGG ATGACAGCAAGGAGTTGCAGCGCTGGAACCCTGGCTGTGCCGAGTGCACCTAGAGGGCACGCAGCGTGAGGGTGTGTCTTCCCTGGATAG CAGCAGCCTCAGCCTCTGCCTGTCCAGCGCCAACAGCCTCTATGACGACATCGAGTGCTTCCTTATGGAGCTGGAGCAGCCCGCCTAGAA >In-frame_ENST00000538426_ENST00000397574_61N_OTUB1_chr11_63764120_+_IRF7_chr11_612800_length(amino acids)=136AA_start in transcript=2_stop in transcript=412 LATRKRSVVRRCLKMAAEEPQQQKQEPLGSDSEGVNCLAYDEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLH -------------------------------------------------------------- >In-frame_ENST00000543004_ENST00000397570_61N_OTUB1_chr11_63764120_+_IRF7_chr11_612800_length(transcript)=622nt_BP=376nt GCTGTTTAAAGATGGCGGCGGAGGAACCTCAGCAGCAGAAGCAGGAGCCGCTGGGCAGCGACTCCGAAGGTGTTAACTGTCTGGCCTATG ATGAAGCCATCATGGCTCAGCAGGACCGAATTCAGCAAGAGGACATGACAGATCCCTGCCTCCTCCAGATTGCTGTGCAGAACCCTCTGG TGTCAGAGCGGCTGGAGCTCTCGGTCCTATACAAGGAGTATGCTGAAGATGACAACATCTATCAACAGAAGATCAAGGACCTCCACAAAA AGTACTCGTACATCCGCAAGACCAGGCCTGACGGCAACTGTTTCTATCGGGCTTTCGGATTCTCCCACTTGGAGGCACTGCTGGATGACA GCAAGGAGTTGCAGCGCTGGAACCCTGGCTGTGCCGAGTGCACCTAGAGGGCACGCAGCGTGAGGGTGTGTCTTCCCTGGATAGCAGCAG CCTCAGCCTCTGCCTGTCCAGCGCCAACAGCCTCTATGACGACATCGAGTGCTTCCTTATGGAGCTGGAGCAGCCCGCCTAGAACCCAGT >In-frame_ENST00000543004_ENST00000397570_61N_OTUB1_chr11_63764120_+_IRF7_chr11_612800_length(amino acids)=131AA_start in transcript=11_stop in transcript=406 MAAEEPQQQKQEPLGSDSEGVNCLAYDEAIMAQQDRIQQEDMTDPCLLQIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLHKKYSY -------------------------------------------------------------- >In-frame_ENST00000543004_ENST00000397574_61N_OTUB1_chr11_63764120_+_IRF7_chr11_612800_length(transcript)=618nt_BP=376nt GCTGTTTAAAGATGGCGGCGGAGGAACCTCAGCAGCAGAAGCAGGAGCCGCTGGGCAGCGACTCCGAAGGTGTTAACTGTCTGGCCTATG ATGAAGCCATCATGGCTCAGCAGGACCGAATTCAGCAAGAGGACATGACAGATCCCTGCCTCCTCCAGATTGCTGTGCAGAACCCTCTGG TGTCAGAGCGGCTGGAGCTCTCGGTCCTATACAAGGAGTATGCTGAAGATGACAACATCTATCAACAGAAGATCAAGGACCTCCACAAAA AGTACTCGTACATCCGCAAGACCAGGCCTGACGGCAACTGTTTCTATCGGGCTTTCGGATTCTCCCACTTGGAGGCACTGCTGGATGACA GCAAGGAGTTGCAGCGCTGGAACCCTGGCTGTGCCGAGTGCACCTAGAGGGCACGCAGCGTGAGGGTGTGTCTTCCCTGGATAGCAGCAG CCTCAGCCTCTGCCTGTCCAGCGCCAACAGCCTCTATGACGACATCGAGTGCTTCCTTATGGAGCTGGAGCAGCCCGCCTAGAACCCAGT >In-frame_ENST00000543004_ENST00000397574_61N_OTUB1_chr11_63764120_+_IRF7_chr11_612800_length(amino acids)=131AA_start in transcript=11_stop in transcript=406 MAAEEPQQQKQEPLGSDSEGVNCLAYDEAIMAQQDRIQQEDMTDPCLLQIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLHKKYSY -------------------------------------------------------------- >In-frame_ENST00000543988_ENST00000397570_61N_OTUB1_chr11_63764120_+_IRF7_chr11_612800_length(transcript)=723nt_BP=477nt CCTTGCAGTCAGGCAGAGAGGCCTACGCCAGGGCCGAGCCCCCCGGCCTGCTCCAGCGGCGGCCCGCGCCGTGAGGGCCTCGAGTTTCGC TGGGCTACGGAGCACAAAGGTCCGGGCGGGCCATTCGGGATGTCGTAGGCGGCCCTGGGATGTGAGGGGCCTGCGGGATCTGTCCCTGAG GCCTGCGACTTTTTCTGGTGTTAACTGTCTGGCCTATGATGAAGCCATCATGGCTCAGCAGGACCGAATTCAGCAAGAGATTGCTGTGCA GAACCCTCTGGTGTCAGAGCGGCTGGAGCTCTCGGTCCTATACAAGGAGTATGCTGAAGATGACAACATCTATCAACAGAAGATCAAGGA CCTCCACAAAAAGTACTCGTACATCCGCAAGACCAGGCCTGACGGCAACTGTTTCTATCGGGCTTTCGGATTCTCCCACTTGGAGGCACT GCTGGATGACAGCAAGGAGTTGCAGCGCTGGAACCCTGGCTGTGCCGAGTGCACCTAGAGGGCACGCAGCGTGAGGGTGTGTCTTCCCTG GATAGCAGCAGCCTCAGCCTCTGCCTGTCCAGCGCCAACAGCCTCTATGACGACATCGAGTGCTTCCTTATGGAGCTGGAGCAGCCCGCC TAGAACCCAGTCTAATGAGAACTCCAGAAAGCTGGAGCAGCCCACCTAGAGCTGGCCGCGGCCGCCCAGTCTAATAAAAAGAACTCCAGA >In-frame_ENST00000543988_ENST00000397570_61N_OTUB1_chr11_63764120_+_IRF7_chr11_612800_length(amino acids)=115AA_start in transcript=160_stop in transcript=507 MRDLSLRPATFSGVNCLAYDEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLHKKYSYIRKTRPDGNCFYRAFG -------------------------------------------------------------- >In-frame_ENST00000543988_ENST00000397574_61N_OTUB1_chr11_63764120_+_IRF7_chr11_612800_length(transcript)=719nt_BP=477nt CCTTGCAGTCAGGCAGAGAGGCCTACGCCAGGGCCGAGCCCCCCGGCCTGCTCCAGCGGCGGCCCGCGCCGTGAGGGCCTCGAGTTTCGC TGGGCTACGGAGCACAAAGGTCCGGGCGGGCCATTCGGGATGTCGTAGGCGGCCCTGGGATGTGAGGGGCCTGCGGGATCTGTCCCTGAG GCCTGCGACTTTTTCTGGTGTTAACTGTCTGGCCTATGATGAAGCCATCATGGCTCAGCAGGACCGAATTCAGCAAGAGATTGCTGTGCA GAACCCTCTGGTGTCAGAGCGGCTGGAGCTCTCGGTCCTATACAAGGAGTATGCTGAAGATGACAACATCTATCAACAGAAGATCAAGGA CCTCCACAAAAAGTACTCGTACATCCGCAAGACCAGGCCTGACGGCAACTGTTTCTATCGGGCTTTCGGATTCTCCCACTTGGAGGCACT GCTGGATGACAGCAAGGAGTTGCAGCGCTGGAACCCTGGCTGTGCCGAGTGCACCTAGAGGGCACGCAGCGTGAGGGTGTGTCTTCCCTG GATAGCAGCAGCCTCAGCCTCTGCCTGTCCAGCGCCAACAGCCTCTATGACGACATCGAGTGCTTCCTTATGGAGCTGGAGCAGCCCGCC >In-frame_ENST00000543988_ENST00000397574_61N_OTUB1_chr11_63764120_+_IRF7_chr11_612800_length(amino acids)=115AA_start in transcript=160_stop in transcript=507 MRDLSLRPATFSGVNCLAYDEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLHKKYSYIRKTRPDGNCFYRAFG -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for OTUB1-IRF7 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for OTUB1-IRF7 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for OTUB1-IRF7 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | IRF7 | C4225358 | IMMUNODEFICIENCY 39 | 2 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
Tgene | IRF7 | C0021368 | Inflammation | 1 | CTD_human |
Tgene | IRF7 | C0021400 | Influenza | 1 | CTD_human |
Tgene | IRF7 | C0041696 | Unipolar Depression | 1 | PSYGENET |
Tgene | IRF7 | C1269683 | Major Depressive Disorder | 1 | PSYGENET |