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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:PARN-CACHD1 (FusionGDB2 ID:62385) |
Fusion Gene Summary for PARN-CACHD1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: PARN-CACHD1 | Fusion gene ID: 62385 | Hgene | Tgene | Gene symbol | PARN | CACHD1 | Gene ID | 5073 | 57685 |
Gene name | poly(A)-specific ribonuclease | cache domain containing 1 | |
Synonyms | DAN|DKCB6|PFBMFT4 | - | |
Cytomap | 16p13.12 | 1p31.3 | |
Type of gene | protein-coding | protein-coding | |
Description | poly(A)-specific ribonuclease PARNdeadenylating nucleasedeadenylation nucleasepolyadenylate-specific ribonuclease | VWFA and cache domain-containing protein 1cache domain-containing protein 1von Willebrand factor type A and cache domain containing 1 | |
Modification date | 20200313 | 20200320 | |
UniProtAcc | . | Q5VU97 | |
Ensembl transtripts involved in fusion gene | ENST00000437198, ENST00000420015, ENST00000341484, ENST00000539279, ENST00000566021, | ENST00000371073, ENST00000290039, ENST00000495994, | |
Fusion gene scores | * DoF score | 15 X 15 X 6=1350 | 15 X 11 X 7=1155 |
# samples | 16 | 15 | |
** MAII score | log2(16/1350*10)=-3.07681559705083 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(15/1155*10)=-2.94485844580754 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: PARN [Title/Abstract] AND CACHD1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | PARN(14687158)-CACHD1(65016277), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | PARN-CACHD1 seems lost the major protein functional domain in Hgene partner, which is a cell metabolism gene due to the frame-shifted ORF. PARN-CACHD1 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | PARN | GO:0000495 | box H/ACA snoRNA 3'-end processing | 22442037 |
Hgene | PARN | GO:0010587 | miRNA catabolic process | 25049417 |
Hgene | PARN | GO:0071051 | polyadenylation-dependent snoRNA 3'-end processing | 22442037 |
Fusion gene breakpoints across PARN (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across CACHD1 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | GBM | TCGA-4W-AA9S-01A | PARN | chr16 | 14687158 | - | CACHD1 | chr1 | 65016277 | + |
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Fusion Gene ORF analysis for PARN-CACHD1 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000437198 | ENST00000371073 | PARN | chr16 | 14687158 | - | CACHD1 | chr1 | 65016277 | + |
In-frame | ENST00000437198 | ENST00000290039 | PARN | chr16 | 14687158 | - | CACHD1 | chr1 | 65016277 | + |
5CDS-3UTR | ENST00000437198 | ENST00000495994 | PARN | chr16 | 14687158 | - | CACHD1 | chr1 | 65016277 | + |
In-frame | ENST00000420015 | ENST00000371073 | PARN | chr16 | 14687158 | - | CACHD1 | chr1 | 65016277 | + |
In-frame | ENST00000420015 | ENST00000290039 | PARN | chr16 | 14687158 | - | CACHD1 | chr1 | 65016277 | + |
5CDS-3UTR | ENST00000420015 | ENST00000495994 | PARN | chr16 | 14687158 | - | CACHD1 | chr1 | 65016277 | + |
Frame-shift | ENST00000341484 | ENST00000371073 | PARN | chr16 | 14687158 | - | CACHD1 | chr1 | 65016277 | + |
Frame-shift | ENST00000341484 | ENST00000290039 | PARN | chr16 | 14687158 | - | CACHD1 | chr1 | 65016277 | + |
5CDS-3UTR | ENST00000341484 | ENST00000495994 | PARN | chr16 | 14687158 | - | CACHD1 | chr1 | 65016277 | + |
In-frame | ENST00000539279 | ENST00000371073 | PARN | chr16 | 14687158 | - | CACHD1 | chr1 | 65016277 | + |
In-frame | ENST00000539279 | ENST00000290039 | PARN | chr16 | 14687158 | - | CACHD1 | chr1 | 65016277 | + |
5CDS-3UTR | ENST00000539279 | ENST00000495994 | PARN | chr16 | 14687158 | - | CACHD1 | chr1 | 65016277 | + |
intron-3CDS | ENST00000566021 | ENST00000371073 | PARN | chr16 | 14687158 | - | CACHD1 | chr1 | 65016277 | + |
intron-3CDS | ENST00000566021 | ENST00000290039 | PARN | chr16 | 14687158 | - | CACHD1 | chr1 | 65016277 | + |
intron-3UTR | ENST00000566021 | ENST00000495994 | PARN | chr16 | 14687158 | - | CACHD1 | chr1 | 65016277 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000437198 | PARN | chr16 | 14687158 | - | ENST00000371073 | CACHD1 | chr1 | 65016277 | + | 6184 | 1060 | 91 | 4686 | 1531 |
ENST00000437198 | PARN | chr16 | 14687158 | - | ENST00000290039 | CACHD1 | chr1 | 65016277 | + | 6184 | 1060 | 91 | 4686 | 1531 |
ENST00000420015 | PARN | chr16 | 14687158 | - | ENST00000371073 | CACHD1 | chr1 | 65016277 | + | 6038 | 914 | 83 | 4540 | 1485 |
ENST00000420015 | PARN | chr16 | 14687158 | - | ENST00000290039 | CACHD1 | chr1 | 65016277 | + | 6038 | 914 | 83 | 4540 | 1485 |
ENST00000539279 | PARN | chr16 | 14687158 | - | ENST00000371073 | CACHD1 | chr1 | 65016277 | + | 5630 | 506 | 62 | 4132 | 1356 |
ENST00000539279 | PARN | chr16 | 14687158 | - | ENST00000290039 | CACHD1 | chr1 | 65016277 | + | 5630 | 506 | 62 | 4132 | 1356 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000437198 | ENST00000371073 | PARN | chr16 | 14687158 | - | CACHD1 | chr1 | 65016277 | + | 0.000109563 | 0.99989045 |
ENST00000437198 | ENST00000290039 | PARN | chr16 | 14687158 | - | CACHD1 | chr1 | 65016277 | + | 0.000109563 | 0.99989045 |
ENST00000420015 | ENST00000371073 | PARN | chr16 | 14687158 | - | CACHD1 | chr1 | 65016277 | + | 0.000114448 | 0.99988556 |
ENST00000420015 | ENST00000290039 | PARN | chr16 | 14687158 | - | CACHD1 | chr1 | 65016277 | + | 0.000114448 | 0.99988556 |
ENST00000539279 | ENST00000371073 | PARN | chr16 | 14687158 | - | CACHD1 | chr1 | 65016277 | + | 0.000121061 | 0.9998789 |
ENST00000539279 | ENST00000290039 | PARN | chr16 | 14687158 | - | CACHD1 | chr1 | 65016277 | + | 0.000121061 | 0.9998789 |
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Fusion Genomic Features for PARN-CACHD1 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
PARN | chr16 | 14687157 | - | CACHD1 | chr1 | 65016276 | + | 1.05E-09 | 1 |
PARN | chr16 | 14687157 | - | CACHD1 | chr1 | 65016276 | + | 1.05E-09 | 1 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for PARN-CACHD1 |
Go to FGviewer for the breakpoints of chr16:14687158-chr1:65016277 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | CACHD1 |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: May regulate voltage-dependent calcium channels. {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | PARN | chr16:14687158 | chr1:65016277 | ENST00000341484 | - | 13 | 24 | 178_245 | 245.0 | 579.0 | Domain | R3H |
Hgene | PARN | chr16:14687158 | chr1:65016277 | ENST00000420015 | - | 12 | 23 | 178_245 | 260.0 | 594.0 | Domain | R3H |
Hgene | PARN | chr16:14687158 | chr1:65016277 | ENST00000437198 | - | 13 | 24 | 178_245 | 306.0 | 640.0 | Domain | R3H |
Tgene | CACHD1 | chr16:14687158 | chr1:65016277 | ENST00000371073 | 0 | 27 | 1243_1260 | 66.0 | 1275.0 | Compositional bias | Note=His-rich | |
Tgene | CACHD1 | chr16:14687158 | chr1:65016277 | ENST00000371073 | 0 | 27 | 943_982 | 66.0 | 1275.0 | Compositional bias | Note=Cys-rich | |
Tgene | CACHD1 | chr16:14687158 | chr1:65016277 | ENST00000371073 | 0 | 27 | 228_443 | 66.0 | 1275.0 | Domain | VWFA | |
Tgene | CACHD1 | chr16:14687158 | chr1:65016277 | ENST00000371073 | 0 | 27 | 453_532 | 66.0 | 1275.0 | Domain | Note=Cache 1 | |
Tgene | CACHD1 | chr16:14687158 | chr1:65016277 | ENST00000371073 | 0 | 27 | 772_853 | 66.0 | 1275.0 | Domain | Note=Cache 2 | |
Tgene | CACHD1 | chr16:14687158 | chr1:65016277 | ENST00000371073 | 0 | 27 | 1117_1274 | 66.0 | 1275.0 | Topological domain | Cytoplasmic | |
Tgene | CACHD1 | chr16:14687158 | chr1:65016277 | ENST00000371073 | 0 | 27 | 1096_1116 | 66.0 | 1275.0 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | CACHD1 | chr16:14687158 | chr1:65016277 | ENST00000371073 | 0 | 27 | 36_1095 | 66.0 | 1275.0 | Topological domain | Extracellular |
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Fusion Gene Sequence for PARN-CACHD1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000437198_ENST00000371073_TCGA-4W-AA9S-01A_PARN_chr16_14687158_-_CACHD1_chr1_65016277_length(transcript)=6184nt_BP=1060nt GCGCGCTGTTTCCGGAAGTCGCGGCCGGCGTCACCGCTGCGGCTGCCTCAGCTACTGCCGCAGTCGCCGCGGAATTCGGCGAGTAGAACC GCTGAGGCGGGCGCGGGCCCGGGTGGGGCCAAGGTTCCGGCCACTCTGCAGAATGGAGATAATCAGGAGCAATTTTAAGAGTAATCTTCA CAAAGTGTACCAGGCCATAGAGGAGGCCGACTTCTTCGCCATCGATGGGGAGTTTTCAGGAATCAGTGATGGACCTTCAGTCTCTGCATT AACAAATGGTTTTGACACTCCAGAAGAGAGGTATCAGAAGCTTAAAAAGCATTCCATGGACTTTTTGCTATTTCAGTTTGGCCTTTGCAC TTTTAAGTATGACTACACAGATTCAAAGTATATAACGAAGTCATTTAACTTCTATGTTTTCCCGAAACCCTTCAATAGATCCTCACCAGA TGTCAAATTTGTTTGTCAGAGCTCCAGCATTGACTTTCTAGCAAGCCAGGGATTTGATTTTAATAAAGTTTTTCGAAATGGAATTCCATA TTTAAATCAGGAAGAAGAAAGACAGTTAAGAGAGCAGTATGATGAAAAACGTTCACAGGCGAATGGTGCAGGAGCTCTGTCCTATGTATC TCCTAACACTTCAAAATGTCCTGTCACGATTCCTGAGGATCAAAAGAAGTTTATTGACCAAGTGGTAGAGAAAATAGAGGATTTATTACA AAGTGAAGAAAACAAGAACTTGGATTTAGAGCCATGTACCGGGTTCCAAAGAAAACTAATTTATCAGACTTTGAGCTGGAAGTATCCGAA AGGCATTCATGTTGAGACTTTAGAAACTGAAAAGAAGGAGCGATATATAGTTATCAGCAAAGTAGATGAAGAAGAACGCAAAAGAAGAGA GCAGCAGAAACATGCCAAAGAACAGGAGGAGCTGAATGATGCTGTGGGATTTTCTAGAGTCATTCACGCCATTGCTAATTCGGGAAAACT TGTTATTGGACACAATATGCTCTTGGACGTCATGCACACAGTTCATCAGTTCTACTGCCCTCTGCCTGCGCGGATATTCAACTCCTTTGT TTACACTGAGAAAATCTCAAATGGAGAAAGTGAAGTACAGCAGCTAGCCAAAAAAATCCGAGAGAAGTTCAACCGTTACTTGGATGTGGT CAATCGGAACAAGCAAGTTGTAGAAGCATCCTATACGGCTCACCTAACCTCTCCCCTAACTGCAATTCAAGACTGCTGTACTATCCCACC TTCCATGATGGAATTCGATGGGAACTTTAATACCAATGTGTCTAGAACAATTAGTTGTGATCGACTTTCTACTACTGTTAATAGCCGGGC CTTCAATCCAGGACGAGACTTAAATTCAGTTCTTGCAGACAACCTGAAATCCAACCCTGGAATTAAGTGGCAATATTTCAGTTCAGAAGA AGGAATTTTCACTGTTTTCCCAGCACACAAGTTCCGGTGTAAGGGCAGCTACGAACACCGCAGTAGACCCATCTACGTCTCTACAGTCCG GCCGCAGTCAAAGCACATAGTAGTGATTCTGGACCACGGGGCTTCAGTCACAGACACTCAGCTTCAGATTGCCAAGGACGCTGCTCAGGT CATCCTCAGCGCCATCGATGAACATGACAAGATTTCTGTGTTAACTGTGGCAGATACCGTCCGGACTTGCTCACTAGACCAGTGCTATAA GACCTTCTTGTCTCCAGCCACCAGTGAGACAAAAAGGAAAATGTCCACCTTTGTTAGCAGCGTGAAGTCTTCAGACAGTCCTACCCAGCA CGCAGTGGGATTCCAAAAGGCATTTCAGCTGATTCGAAGTACAAACAATAACACAAAGTTCCAAGCAAATACAGACATGGTCATCATTTA CCTGTCAGCTGGCATTACATCAAAGGACTCTTCGGAAGAAGATAAAAAAGCGACTCTCCAAGTCATCAATGAAGAAAATAGCTTTCTAAA CAACTCTGTAATGATTCTCACCTATGCCCTCATGAACGATGGGGTGACTGGTTTGAAAGAGCTGGCTTTTCTGAGGGATCTAGCTGAACA GAATTCAGGGAAGTACGGTGTGCCAGACCGGATGGCCTTGCCTGTGATTAAGGGCAGCATGATGGTGCTGAATCAGTTGAGCAACCTGGA GACCACAGTGGGCAGGTTCTACACAAACCTTCCCAACCGGATGATTGATGAAGCCGTCTTCAGCCTGCCCTTCTCTGATGAGATGGGAGA TGGTTTGATAATGACTGTGAGTAAACCCTGTTATTTTGGAAACCTACTTCTGGGAATTGTAGGTGTGGACGTGAATCTGGCTTACATTCT TGAAGACGTGACGTATTACCAAGACTCTTTGGCTTCCTATACTTTTCTCATAGACGACAAAGGATATACACTTATGCACCCATCTCTTAC CAGGCCATATTTATTGTCAGAGCCCCCACTTCATACTGACATCATACATTATGAAAATATTCCAAAATTTGAATTAGTTCGGCAAAATAT CCTAAGCCTCCCTCTGGGCAGCCAGATTATCGCAGTCCCTGTGAACTCATCCCTGTCTTGGCACATAAACAAGCTGAGAGAAACTGGAAA GGAAGCCTACAATGTTAGCTATGCCTGGAAGATGGTACAAGACACTTCCTTTATTCTGTGTATTGTGGTGATACAACCAGAAATACCTGT GAAACAACTGAAGAACCTCAACACTGTTCCCAGCAGCAAGCTGCTGTACCACCGGCTGGATCTCCTTGGCCAGCCCAGTGCTTGCCTCCA CTTCAAACAGCTGGCAACCCTAGAAAGTCCCACCATCATGCTGTCTGCTGGCAGCTTTTCCTCCCCCTATGAGCACCTCAGCCAGCCAGA GACAAAGCGCATGGTAGAGCACTACACCGCCTATCTCAGCGACAACACCCGCCTCATTGCTAACCCGGGCCTCAAATTCTCTGTCAGAAA TGAAGTAATGGCTACCAGCCACGTCACAGATGAATGGATGACACAAATGGAAATGAGTAGCCTGAACACTTACATTGTCCGCCGTTACAT AGCAACACCCAATGGCGTCCTCAGAATTTATCCTGGTTCCCTCATGGACAAAGCATTTGATCCCACTAGGAGACAATGGTATCTCCATGC AGTAGCTAATCCAGGGTTGATTTCTTTGACTGGTCCTTACTTAGATGTTGGAGGAGCTGGTTATGTTGTGACAATCAGTCACACAATTCA TTCATCCAGTACACAGCTGTCTTCTGGGCACACTGTGGCTGTGATGGGCATTGACTTCACACTCAGATACTTCTACAAAGTTCTGATGGA CCTATTACCTGTCTGTAACCAAGATGGTGGCAACAAAATAAGGTGCTTCATAATGGAGGACAGGGGTTATCTGGTGGCGCACCCGACTCT CATCGACCCCAAAGGACATGCACCTGTGGAGCAGCAGCACATCACCCACAAGGAGCCCCTGGTAGCAAATGATATCCTCAACCACCCCAA CTTTGTAAAGAAAAACCTGTGCAACAGCTTCAGTGACAGAACGGTCCAGAGGTTTTATAAATTCAACACCAGCCTTGCGGGGGATTTGAC GAACCTTGTGCATGGCAGCCACTGTTCCAAATACAGATTAGCAAGGATCCCAGGAACCAACGCGTTTGTTGGCATTGTCAACGAAACCTG CGACTCTCTTGCCTTCTGTGCCTGCAGCATGGTGGACCGACTCTGTCTCAACTGTCACCGAATGGAACAAAATGAATGTGAATGTCCTTG TGAGTGCCCTCTAGAGGTCAATGAGTGCACTGGCAACCTCACCAATGCAGAGAACCGAAACCCCAGCTGCGAGGTCCACCAGGAGCCGGT GACATACACAGCTATTGACCCTGGCCTGCAAGATGCTCTTCACCAGTGTGTCAACAGCAGGTGCAGTCAGAGGCTGGAAAGTGGGGACTG TTTTGGGGTGCTGGATTGTGAATGGTGCATGGTGGACAGTGATGGAAAGACTCACCTGGACAAACCCTACTGTGCCCCCCAGAAAGAATG CTTCGGGGGGATTGTGGGAGCCAAAAGTCCCTACGTTGATGACATGGGAGCAATAGGTGATGAGGTGATCACATTAAACATGATTAAAAG CGCCCCTGTGGGTCCTGTGGCTGGAGGGATCATGGGATGCATCATGGTCTTGGTCCTGGCGGTGTATGCCTACCGCCACCAGATTCATCG CCGGAGCCATCAGCATATGTCTCCTCTTGCTGCCCAAGAAATGTCAGTGCGTATGTCCAACCTGGAGAATGACAGAGATGAAAGGGACGA CGACAGCCACGAAGACAGAGGCATCATCAGCAACACTCGGTTTATAGCTGCGGTCATCGAACGACATGCACACAGTCCAGAAAGAAGGCG CCGCTACTGGGGTCGATCAGGAACAGAAAGTGATCATGGTTACAGCACCATGAGCCCACAGGAGGACAGTGAAAATCCTCCATGCAACAA TGACCCCTTGTCAGCCGGGGTCGATGTGGGAAACCATGATGAGGACTTAGACCTGGATACCCCCCCTCAGACTGCTGCCCTACTAAGTCA CAAGTTCCACCACTACCGGTCACACCACCCTACACTTCATCATAGCCACCACTTACAGGCGGCCGTCACGGTACACACTGTCGATGCAGA ATGCTAACAATCTCCTCACCTCCACGCCAAGATGAGATCTGGGAGCTACAGAATGTTCTGGAAAGAAAAAGAACCGGCTTAAAACCCACA GCAAGAGACCTCCCTTGTGTTTGTGCTTTGTGCAGAGTTGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACA ACACAGTCACATTTGTGAAGATGTGAGGCTGGTTCTGAAATGGAGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAG GTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAAGTGAAGCTGAGCCAGAGGAATGTTCCAAAGAGCCAGAAGCATTCAGC TCTCCTTAACTGGAAGAGAGAAAAATCTGCTCACCCAGAGACTGGAATGTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCT TTGTTTCTTAGCGGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATGCATCTCAGAATTTCTAAGTAAAGG ATTATTTTTCTACTATTTATTGAACTTTCAAACATTCTCAAACTTTGGGGAAAAGGAAAGGAAACACAGGAGAAGTTTTCAGCAGTTGCC CCGAGCTGTTTTGTGTGTAATGAAGTGGTTCTTTGATTAAGGAGCTCTATTTCTTATTTAACTGATATCCCACTGCCCCACTCCACAAAA TAGGAAAATGAAGAAATCTTTCTCTCTGACTTGTTTACATCATTTCACGGAAACACATCTTTGTTTGTAATGCAGTATTCTTTCTCTGTG TTTGACAGAGATGGGGAGGGGCAGAGGAATTTAAGAGGTTTTAAAAGAAATGTTATGTTTCTTATGACTTGTTTCCACTCCTCGTACAAT GCTATTCTTAGGTTTCTACGAAACCTAATGTTAGAACCGCATCCTTTCAGCTAAGGGAGGGTTGGATTTATTTTCCTTGTTTTAGAGACT ACAAATTTTTAAATATCCCATTTTGACTGAGAATATTGACATATAAGGGAAGAAGTTTTCTAAATTGTGAAAGTCTGGTTCTTAATTAAA GAATTTTTTTTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAAATTGCTTTGTGATTTATACAGGGATTA ATCAAATCTGGCTACTATAACATGGGGCATTGTAACTTTAAAGTAGTGTTTTAATTACAGTGATGTATTTTAGACTCACATTTTGTGATT CAAATATGTTATAAAGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAAAAAATTCACTGAAT AATGTTTTAATGATAGGGTATTATGATACAATGTAAAAAACAATTGGTTCTTCAGCAGTACAGAAAGTAAACTATATATGTGCTATCAGG >In-frame_ENST00000437198_ENST00000371073_TCGA-4W-AA9S-01A_PARN_chr16_14687158_-_CACHD1_chr1_65016277_length(amino acids)=1531AA_start in transcript=91_stop in transcript=4686 MRRARARVGPRFRPLCRMEIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVSALTNGFDTPEERYQKLKKHSMDFLLFQFGLCT FKYDYTDSKYITKSFNFYVFPKPFNRSSPDVKFVCQSSSIDFLASQGFDFNKVFRNGIPYLNQEEERQLREQYDEKRSQANGAGALSYVS PNTSKCPVTIPEDQKKFIDQVVEKIEDLLQSEENKNLDLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYIVISKVDEEERKRRE QQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQFYCPLPARIFNSFVYTEKISNGESEVQQLAKKIREKFNRYLDVV NRNKQVVEASYTAHLTSPLTAIQDCCTIPPSMMEFDGNFNTNVSRTISCDRLSTTVNSRAFNPGRDLNSVLADNLKSNPGIKWQYFSSEE GIFTVFPAHKFRCKGSYEHRSRPIYVSTVRPQSKHIVVILDHGASVTDTQLQIAKDAAQVILSAIDEHDKISVLTVADTVRTCSLDQCYK TFLSPATSETKRKMSTFVSSVKSSDSPTQHAVGFQKAFQLIRSTNNNTKFQANTDMVIIYLSAGITSKDSSEEDKKATLQVINEENSFLN NSVMILTYALMNDGVTGLKELAFLRDLAEQNSGKYGVPDRMALPVIKGSMMVLNQLSNLETTVGRFYTNLPNRMIDEAVFSLPFSDEMGD GLIMTVSKPCYFGNLLLGIVGVDVNLAYILEDVTYYQDSLASYTFLIDDKGYTLMHPSLTRPYLLSEPPLHTDIIHYENIPKFELVRQNI LSLPLGSQIIAVPVNSSLSWHINKLRETGKEAYNVSYAWKMVQDTSFILCIVVIQPEIPVKQLKNLNTVPSSKLLYHRLDLLGQPSACLH FKQLATLESPTIMLSAGSFSSPYEHLSQPETKRMVEHYTAYLSDNTRLIANPGLKFSVRNEVMATSHVTDEWMTQMEMSSLNTYIVRRYI ATPNGVLRIYPGSLMDKAFDPTRRQWYLHAVANPGLISLTGPYLDVGGAGYVVTISHTIHSSSTQLSSGHTVAVMGIDFTLRYFYKVLMD LLPVCNQDGGNKIRCFIMEDRGYLVAHPTLIDPKGHAPVEQQHITHKEPLVANDILNHPNFVKKNLCNSFSDRTVQRFYKFNTSLAGDLT NLVHGSHCSKYRLARIPGTNAFVGIVNETCDSLAFCACSMVDRLCLNCHRMEQNECECPCECPLEVNECTGNLTNAENRNPSCEVHQEPV TYTAIDPGLQDALHQCVNSRCSQRLESGDCFGVLDCEWCMVDSDGKTHLDKPYCAPQKECFGGIVGAKSPYVDDMGAIGDEVITLNMIKS APVGPVAGGIMGCIMVLVLAVYAYRHQIHRRSHQHMSPLAAQEMSVRMSNLENDRDERDDDSHEDRGIISNTRFIAAVIERHAHSPERRR RYWGRSGTESDHGYSTMSPQEDSENPPCNNDPLSAGVDVGNHDEDLDLDTPPQTAALLSHKFHHYRSHHPTLHHSHHLQAAVTVHTVDAE -------------------------------------------------------------- >In-frame_ENST00000437198_ENST00000290039_TCGA-4W-AA9S-01A_PARN_chr16_14687158_-_CACHD1_chr1_65016277_length(transcript)=6184nt_BP=1060nt GCGCGCTGTTTCCGGAAGTCGCGGCCGGCGTCACCGCTGCGGCTGCCTCAGCTACTGCCGCAGTCGCCGCGGAATTCGGCGAGTAGAACC GCTGAGGCGGGCGCGGGCCCGGGTGGGGCCAAGGTTCCGGCCACTCTGCAGAATGGAGATAATCAGGAGCAATTTTAAGAGTAATCTTCA CAAAGTGTACCAGGCCATAGAGGAGGCCGACTTCTTCGCCATCGATGGGGAGTTTTCAGGAATCAGTGATGGACCTTCAGTCTCTGCATT AACAAATGGTTTTGACACTCCAGAAGAGAGGTATCAGAAGCTTAAAAAGCATTCCATGGACTTTTTGCTATTTCAGTTTGGCCTTTGCAC TTTTAAGTATGACTACACAGATTCAAAGTATATAACGAAGTCATTTAACTTCTATGTTTTCCCGAAACCCTTCAATAGATCCTCACCAGA TGTCAAATTTGTTTGTCAGAGCTCCAGCATTGACTTTCTAGCAAGCCAGGGATTTGATTTTAATAAAGTTTTTCGAAATGGAATTCCATA TTTAAATCAGGAAGAAGAAAGACAGTTAAGAGAGCAGTATGATGAAAAACGTTCACAGGCGAATGGTGCAGGAGCTCTGTCCTATGTATC TCCTAACACTTCAAAATGTCCTGTCACGATTCCTGAGGATCAAAAGAAGTTTATTGACCAAGTGGTAGAGAAAATAGAGGATTTATTACA AAGTGAAGAAAACAAGAACTTGGATTTAGAGCCATGTACCGGGTTCCAAAGAAAACTAATTTATCAGACTTTGAGCTGGAAGTATCCGAA AGGCATTCATGTTGAGACTTTAGAAACTGAAAAGAAGGAGCGATATATAGTTATCAGCAAAGTAGATGAAGAAGAACGCAAAAGAAGAGA GCAGCAGAAACATGCCAAAGAACAGGAGGAGCTGAATGATGCTGTGGGATTTTCTAGAGTCATTCACGCCATTGCTAATTCGGGAAAACT TGTTATTGGACACAATATGCTCTTGGACGTCATGCACACAGTTCATCAGTTCTACTGCCCTCTGCCTGCGCGGATATTCAACTCCTTTGT TTACACTGAGAAAATCTCAAATGGAGAAAGTGAAGTACAGCAGCTAGCCAAAAAAATCCGAGAGAAGTTCAACCGTTACTTGGATGTGGT CAATCGGAACAAGCAAGTTGTAGAAGCATCCTATACGGCTCACCTAACCTCTCCCCTAACTGCAATTCAAGACTGCTGTACTATCCCACC TTCCATGATGGAATTCGATGGGAACTTTAATACCAATGTGTCTAGAACAATTAGTTGTGATCGACTTTCTACTACTGTTAATAGCCGGGC CTTCAATCCAGGACGAGACTTAAATTCAGTTCTTGCAGACAACCTGAAATCCAACCCTGGAATTAAGTGGCAATATTTCAGTTCAGAAGA AGGAATTTTCACTGTTTTCCCAGCACACAAGTTCCGGTGTAAGGGCAGCTACGAACACCGCAGTAGACCCATCTACGTCTCTACAGTCCG GCCGCAGTCAAAGCACATAGTAGTGATTCTGGACCACGGGGCTTCAGTCACAGACACTCAGCTTCAGATTGCCAAGGACGCTGCTCAGGT CATCCTCAGCGCCATCGATGAACATGACAAGATTTCTGTGTTAACTGTGGCAGATACCGTCCGGACTTGCTCACTAGACCAGTGCTATAA GACCTTCTTGTCTCCAGCCACCAGTGAGACAAAAAGGAAAATGTCCACCTTTGTTAGCAGCGTGAAGTCTTCAGACAGTCCTACCCAGCA CGCAGTGGGATTCCAAAAGGCATTTCAGCTGATTCGAAGTACAAACAATAACACAAAGTTCCAAGCAAATACAGACATGGTCATCATTTA CCTGTCAGCTGGCATTACATCAAAGGACTCTTCGGAAGAAGATAAAAAAGCGACTCTCCAAGTCATCAATGAAGAAAATAGCTTTCTAAA CAACTCTGTAATGATTCTCACCTATGCCCTCATGAACGATGGGGTGACTGGTTTGAAAGAGCTGGCTTTTCTGAGGGATCTAGCTGAACA GAATTCAGGGAAGTACGGTGTGCCAGACCGGATGGCCTTGCCTGTGATTAAGGGCAGCATGATGGTGCTGAATCAGTTGAGCAACCTGGA GACCACAGTGGGCAGGTTCTACACAAACCTTCCCAACCGGATGATTGATGAAGCCGTCTTCAGCCTGCCCTTCTCTGATGAGATGGGAGA TGGTTTGATAATGACTGTGAGTAAACCCTGTTATTTTGGAAACCTACTTCTGGGAATTGTAGGTGTGGACGTGAATCTGGCTTACATTCT TGAAGACGTGACGTATTACCAAGACTCTTTGGCTTCCTATACTTTTCTCATAGACGACAAAGGATATACACTTATGCACCCATCTCTTAC CAGGCCATATTTATTGTCAGAGCCCCCACTTCATACTGACATCATACATTATGAAAATATTCCAAAATTTGAATTAGTTCGGCAAAATAT CCTAAGCCTCCCTCTGGGCAGCCAGATTATCGCAGTCCCTGTGAACTCATCCCTGTCTTGGCACATAAACAAGCTGAGAGAAACTGGAAA GGAAGCCTACAATGTTAGCTATGCCTGGAAGATGGTACAAGACACTTCCTTTATTCTGTGTATTGTGGTGATACAACCAGAAATACCTGT GAAACAACTGAAGAACCTCAACACTGTTCCCAGCAGCAAGCTGCTGTACCACCGGCTGGATCTCCTTGGCCAGCCCAGTGCTTGCCTCCA CTTCAAACAGCTGGCAACCCTAGAAAGTCCCACCATCATGCTGTCTGCTGGCAGCTTTTCCTCCCCCTATGAGCACCTCAGCCAGCCAGA GACAAAGCGCATGGTAGAGCACTACACCGCCTATCTCAGCGACAACACCCGCCTCATTGCTAACCCGGGCCTCAAATTCTCTGTCAGAAA TGAAGTAATGGCTACCAGCCACGTCACAGATGAATGGATGACACAAATGGAAATGAGTAGCCTGAACACTTACATTGTCCGCCGTTACAT AGCAACACCCAATGGCGTCCTCAGAATTTATCCTGGTTCCCTCATGGACAAAGCATTTGATCCCACTAGGAGACAATGGTATCTCCATGC AGTAGCTAATCCAGGGTTGATTTCTTTGACTGGTCCTTACTTAGATGTTGGAGGAGCTGGTTATGTTGTGACAATCAGTCACACAATTCA TTCATCCAGTACACAGCTGTCTTCTGGGCACACTGTGGCTGTGATGGGCATTGACTTCACACTCAGATACTTCTACAAAGTTCTGATGGA CCTATTACCTGTCTGTAACCAAGATGGTGGCAACAAAATAAGGTGCTTCATAATGGAGGACAGGGGTTATCTGGTGGCGCACCCGACTCT CATCGACCCCAAAGGACATGCACCTGTGGAGCAGCAGCACATCACCCACAAGGAGCCCCTGGTAGCAAATGATATCCTCAACCACCCCAA CTTTGTAAAGAAAAACCTGTGCAACAGCTTCAGTGACAGAACGGTCCAGAGGTTTTATAAATTCAACACCAGCCTTGCGGGGGATTTGAC GAACCTTGTGCATGGCAGCCACTGTTCCAAATACAGATTAGCAAGGATCCCAGGAACCAACGCGTTTGTTGGCATTGTCAACGAAACCTG CGACTCTCTTGCCTTCTGTGCCTGCAGCATGGTGGACCGACTCTGTCTCAACTGTCACCGAATGGAACAAAATGAATGTGAATGTCCTTG TGAGTGCCCTCTAGAGGTCAATGAGTGCACTGGCAACCTCACCAATGCAGAGAACCGAAACCCCAGCTGCGAGGTCCACCAGGAGCCGGT GACATACACAGCTATTGACCCTGGCCTGCAAGATGCTCTTCACCAGTGTGTCAACAGCAGGTGCAGTCAGAGGCTGGAAAGTGGGGACTG TTTTGGGGTGCTGGATTGTGAATGGTGCATGGTGGACAGTGATGGAAAGACTCACCTGGACAAACCCTACTGTGCCCCCCAGAAAGAATG CTTCGGGGGGATTGTGGGAGCCAAAAGTCCCTACGTTGATGACATGGGAGCAATAGGTGATGAGGTGATCACATTAAACATGATTAAAAG CGCCCCTGTGGGTCCTGTGGCTGGAGGGATCATGGGATGCATCATGGTCTTGGTCCTGGCGGTGTATGCCTACCGCCACCAGATTCATCG CCGGAGCCATCAGCATATGTCTCCTCTTGCTGCCCAAGAAATGTCAGTGCGTATGTCCAACCTGGAGAATGACAGAGATGAAAGGGACGA CGACAGCCACGAAGACAGAGGCATCATCAGCAACACTCGGTTTATAGCTGCGGTCATCGAACGACATGCACACAGTCCAGAAAGAAGGCG CCGCTACTGGGGTCGATCAGGAACAGAAAGTGATCATGGTTACAGCACCATGAGCCCACAGGAGGACAGTGAAAATCCTCCATGCAACAA TGACCCCTTGTCAGCCGGGGTCGATGTGGGAAACCATGATGAGGACTTAGACCTGGATACCCCCCCTCAGACTGCTGCCCTACTAAGTCA CAAGTTCCACCACTACCGGTCACACCACCCTACACTTCATCATAGCCACCACTTACAGGCGGCCGTCACGGTACACACTGTCGATGCAGA ATGCTAACAATCTCCTCACCTCCACGCCAAGATGAGATCTGGGAGCTACAGAATGTTCTGGAAAGAAAAAGAACCGGCTTAAAACCCACA GCAAGAGACCTCCCTTGTGTTTGTGCTTTGTGCAGAGTTGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACA ACACAGTCACATTTGTGAAGATGTGAGGCTGGTTCTGAAATGGAGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAG GTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAAGTGAAGCTGAGCCAGAGGAATGTTCCAAAGAGCCAGAAGCATTCAGC TCTCCTTAACTGGAAGAGAGAAAAATCTGCTCACCCAGAGACTGGAATGTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCT TTGTTTCTTAGCGGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATGCATCTCAGAATTTCTAAGTAAAGG ATTATTTTTCTACTATTTATTGAACTTTCAAACATTCTCAAACTTTGGGGAAAAGGAAAGGAAACACAGGAGAAGTTTTCAGCAGTTGCC CCGAGCTGTTTTGTGTGTAATGAAGTGGTTCTTTGATTAAGGAGCTCTATTTCTTATTTAACTGATATCCCACTGCCCCACTCCACAAAA TAGGAAAATGAAGAAATCTTTCTCTCTGACTTGTTTACATCATTTCACGGAAACACATCTTTGTTTGTAATGCAGTATTCTTTCTCTGTG TTTGACAGAGATGGGGAGGGGCAGAGGAATTTAAGAGGTTTTAAAAGAAATGTTATGTTTCTTATGACTTGTTTCCACTCCTCGTACAAT GCTATTCTTAGGTTTCTACGAAACCTAATGTTAGAACCGCATCCTTTCAGCTAAGGGAGGGTTGGATTTATTTTCCTTGTTTTAGAGACT ACAAATTTTTAAATATCCCATTTTGACTGAGAATATTGACATATAAGGGAAGAAGTTTTCTAAATTGTGAAAGTCTGGTTCTTAATTAAA GAATTTTTTTTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAAATTGCTTTGTGATTTATACAGGGATTA ATCAAATCTGGCTACTATAACATGGGGCATTGTAACTTTAAAGTAGTGTTTTAATTACAGTGATGTATTTTAGACTCACATTTTGTGATT CAAATATGTTATAAAGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAAAAAATTCACTGAAT AATGTTTTAATGATAGGGTATTATGATACAATGTAAAAAACAATTGGTTCTTCAGCAGTACAGAAAGTAAACTATATATGTGCTATCAGG >In-frame_ENST00000437198_ENST00000290039_TCGA-4W-AA9S-01A_PARN_chr16_14687158_-_CACHD1_chr1_65016277_length(amino acids)=1531AA_start in transcript=91_stop in transcript=4686 MRRARARVGPRFRPLCRMEIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVSALTNGFDTPEERYQKLKKHSMDFLLFQFGLCT FKYDYTDSKYITKSFNFYVFPKPFNRSSPDVKFVCQSSSIDFLASQGFDFNKVFRNGIPYLNQEEERQLREQYDEKRSQANGAGALSYVS PNTSKCPVTIPEDQKKFIDQVVEKIEDLLQSEENKNLDLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYIVISKVDEEERKRRE QQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQFYCPLPARIFNSFVYTEKISNGESEVQQLAKKIREKFNRYLDVV NRNKQVVEASYTAHLTSPLTAIQDCCTIPPSMMEFDGNFNTNVSRTISCDRLSTTVNSRAFNPGRDLNSVLADNLKSNPGIKWQYFSSEE GIFTVFPAHKFRCKGSYEHRSRPIYVSTVRPQSKHIVVILDHGASVTDTQLQIAKDAAQVILSAIDEHDKISVLTVADTVRTCSLDQCYK TFLSPATSETKRKMSTFVSSVKSSDSPTQHAVGFQKAFQLIRSTNNNTKFQANTDMVIIYLSAGITSKDSSEEDKKATLQVINEENSFLN NSVMILTYALMNDGVTGLKELAFLRDLAEQNSGKYGVPDRMALPVIKGSMMVLNQLSNLETTVGRFYTNLPNRMIDEAVFSLPFSDEMGD GLIMTVSKPCYFGNLLLGIVGVDVNLAYILEDVTYYQDSLASYTFLIDDKGYTLMHPSLTRPYLLSEPPLHTDIIHYENIPKFELVRQNI LSLPLGSQIIAVPVNSSLSWHINKLRETGKEAYNVSYAWKMVQDTSFILCIVVIQPEIPVKQLKNLNTVPSSKLLYHRLDLLGQPSACLH FKQLATLESPTIMLSAGSFSSPYEHLSQPETKRMVEHYTAYLSDNTRLIANPGLKFSVRNEVMATSHVTDEWMTQMEMSSLNTYIVRRYI ATPNGVLRIYPGSLMDKAFDPTRRQWYLHAVANPGLISLTGPYLDVGGAGYVVTISHTIHSSSTQLSSGHTVAVMGIDFTLRYFYKVLMD LLPVCNQDGGNKIRCFIMEDRGYLVAHPTLIDPKGHAPVEQQHITHKEPLVANDILNHPNFVKKNLCNSFSDRTVQRFYKFNTSLAGDLT NLVHGSHCSKYRLARIPGTNAFVGIVNETCDSLAFCACSMVDRLCLNCHRMEQNECECPCECPLEVNECTGNLTNAENRNPSCEVHQEPV TYTAIDPGLQDALHQCVNSRCSQRLESGDCFGVLDCEWCMVDSDGKTHLDKPYCAPQKECFGGIVGAKSPYVDDMGAIGDEVITLNMIKS APVGPVAGGIMGCIMVLVLAVYAYRHQIHRRSHQHMSPLAAQEMSVRMSNLENDRDERDDDSHEDRGIISNTRFIAAVIERHAHSPERRR RYWGRSGTESDHGYSTMSPQEDSENPPCNNDPLSAGVDVGNHDEDLDLDTPPQTAALLSHKFHHYRSHHPTLHHSHHLQAAVTVHTVDAE -------------------------------------------------------------- >In-frame_ENST00000420015_ENST00000371073_TCGA-4W-AA9S-01A_PARN_chr16_14687158_-_CACHD1_chr1_65016277_length(transcript)=6038nt_BP=914nt TTTCCGGAAGTCGCGGCCGGCGTCACCGCTGCGGCTGCCTCAGCTACTGCCGCAGTCGCCGCGGAATTCGGCGAGTAGAACCGCTGAGGC GGGCGCGGGCCCGGGTGGGGCCAAGGTTCCGGCCACTCTGCAGAATGGAGATAATCAGGAGCAATTTTAAGAGTAATCTTCACAAAGTGT ACCAGGCCATAGAGGAGGCCGACTTCTTCGCCATCGATGGGGAGTTTTCAGGAATCAGTGATGGACCTTCAGTCTCTGCATTAACAAATG GTTTTGACACTCCAGAAGAGAGATCCTCACCAGATGTCAAATTTGTTTGTCAGAGCTCCAGCATTGACTTTCTAGCAAGCCAGGGATTTG ATTTTAATAAAGTTTTTCGAAATGGAATTCCATATTTAAATCAGGAAGAAGAAAGACAGTTAAGAGAGCAGTATGATGAAAAACGTTCAC AGGCGAATGGTGCAGGAGCTCTGTCCTATGTATCTCCTAACACTTCAAAATGTCCTGTCACGATTCCTGAGGATCAAAAGAAGTTTATTG ACCAAGTGGTAGAGAAAATAGAGGATTTATTACAAAGTGAAGAAAACAAGAACTTGGATTTAGAGCCATGTACCGGGTTCCAAAGAAAAC TAATTTATCAGACTTTGAGCTGGAAGTATCCGAAAGGCATTCATGTTGAGACTTTAGAAACTGAAAAGAAGGAGCGATATATAGTTATCA GCAAAGTAGATGAAGAAGAACGCAAAAGAAGAGAGCAGCAGAAACATGCCAAAGAACAGGAGGAGCTGAATGATGCTGTGGGATTTTCTA GAGTCATTCACGCCATTGCTAATTCGGGAAAACTTGTTATTGGACACAATATGCTCTTGGACGTCATGCACACAGTTCATCAGTTCTACT GCCCTCTGCCTGCGCGGATATTCAACTCCTTTGTTTACACTGAGAAAATCTCAAATGGAGAAAGTGAAGTACAGCAGCTAGCCAAAAAAA TCCGAGAGAAGTTCAACCGTTACTTGGATGTGGTCAATCGGAACAAGCAAGTTGTAGAAGCATCCTATACGGCTCACCTAACCTCTCCCC TAACTGCAATTCAAGACTGCTGTACTATCCCACCTTCCATGATGGAATTCGATGGGAACTTTAATACCAATGTGTCTAGAACAATTAGTT GTGATCGACTTTCTACTACTGTTAATAGCCGGGCCTTCAATCCAGGACGAGACTTAAATTCAGTTCTTGCAGACAACCTGAAATCCAACC CTGGAATTAAGTGGCAATATTTCAGTTCAGAAGAAGGAATTTTCACTGTTTTCCCAGCACACAAGTTCCGGTGTAAGGGCAGCTACGAAC ACCGCAGTAGACCCATCTACGTCTCTACAGTCCGGCCGCAGTCAAAGCACATAGTAGTGATTCTGGACCACGGGGCTTCAGTCACAGACA CTCAGCTTCAGATTGCCAAGGACGCTGCTCAGGTCATCCTCAGCGCCATCGATGAACATGACAAGATTTCTGTGTTAACTGTGGCAGATA CCGTCCGGACTTGCTCACTAGACCAGTGCTATAAGACCTTCTTGTCTCCAGCCACCAGTGAGACAAAAAGGAAAATGTCCACCTTTGTTA GCAGCGTGAAGTCTTCAGACAGTCCTACCCAGCACGCAGTGGGATTCCAAAAGGCATTTCAGCTGATTCGAAGTACAAACAATAACACAA AGTTCCAAGCAAATACAGACATGGTCATCATTTACCTGTCAGCTGGCATTACATCAAAGGACTCTTCGGAAGAAGATAAAAAAGCGACTC TCCAAGTCATCAATGAAGAAAATAGCTTTCTAAACAACTCTGTAATGATTCTCACCTATGCCCTCATGAACGATGGGGTGACTGGTTTGA AAGAGCTGGCTTTTCTGAGGGATCTAGCTGAACAGAATTCAGGGAAGTACGGTGTGCCAGACCGGATGGCCTTGCCTGTGATTAAGGGCA GCATGATGGTGCTGAATCAGTTGAGCAACCTGGAGACCACAGTGGGCAGGTTCTACACAAACCTTCCCAACCGGATGATTGATGAAGCCG TCTTCAGCCTGCCCTTCTCTGATGAGATGGGAGATGGTTTGATAATGACTGTGAGTAAACCCTGTTATTTTGGAAACCTACTTCTGGGAA TTGTAGGTGTGGACGTGAATCTGGCTTACATTCTTGAAGACGTGACGTATTACCAAGACTCTTTGGCTTCCTATACTTTTCTCATAGACG ACAAAGGATATACACTTATGCACCCATCTCTTACCAGGCCATATTTATTGTCAGAGCCCCCACTTCATACTGACATCATACATTATGAAA ATATTCCAAAATTTGAATTAGTTCGGCAAAATATCCTAAGCCTCCCTCTGGGCAGCCAGATTATCGCAGTCCCTGTGAACTCATCCCTGT CTTGGCACATAAACAAGCTGAGAGAAACTGGAAAGGAAGCCTACAATGTTAGCTATGCCTGGAAGATGGTACAAGACACTTCCTTTATTC TGTGTATTGTGGTGATACAACCAGAAATACCTGTGAAACAACTGAAGAACCTCAACACTGTTCCCAGCAGCAAGCTGCTGTACCACCGGC TGGATCTCCTTGGCCAGCCCAGTGCTTGCCTCCACTTCAAACAGCTGGCAACCCTAGAAAGTCCCACCATCATGCTGTCTGCTGGCAGCT TTTCCTCCCCCTATGAGCACCTCAGCCAGCCAGAGACAAAGCGCATGGTAGAGCACTACACCGCCTATCTCAGCGACAACACCCGCCTCA TTGCTAACCCGGGCCTCAAATTCTCTGTCAGAAATGAAGTAATGGCTACCAGCCACGTCACAGATGAATGGATGACACAAATGGAAATGA GTAGCCTGAACACTTACATTGTCCGCCGTTACATAGCAACACCCAATGGCGTCCTCAGAATTTATCCTGGTTCCCTCATGGACAAAGCAT TTGATCCCACTAGGAGACAATGGTATCTCCATGCAGTAGCTAATCCAGGGTTGATTTCTTTGACTGGTCCTTACTTAGATGTTGGAGGAG CTGGTTATGTTGTGACAATCAGTCACACAATTCATTCATCCAGTACACAGCTGTCTTCTGGGCACACTGTGGCTGTGATGGGCATTGACT TCACACTCAGATACTTCTACAAAGTTCTGATGGACCTATTACCTGTCTGTAACCAAGATGGTGGCAACAAAATAAGGTGCTTCATAATGG AGGACAGGGGTTATCTGGTGGCGCACCCGACTCTCATCGACCCCAAAGGACATGCACCTGTGGAGCAGCAGCACATCACCCACAAGGAGC CCCTGGTAGCAAATGATATCCTCAACCACCCCAACTTTGTAAAGAAAAACCTGTGCAACAGCTTCAGTGACAGAACGGTCCAGAGGTTTT ATAAATTCAACACCAGCCTTGCGGGGGATTTGACGAACCTTGTGCATGGCAGCCACTGTTCCAAATACAGATTAGCAAGGATCCCAGGAA CCAACGCGTTTGTTGGCATTGTCAACGAAACCTGCGACTCTCTTGCCTTCTGTGCCTGCAGCATGGTGGACCGACTCTGTCTCAACTGTC ACCGAATGGAACAAAATGAATGTGAATGTCCTTGTGAGTGCCCTCTAGAGGTCAATGAGTGCACTGGCAACCTCACCAATGCAGAGAACC GAAACCCCAGCTGCGAGGTCCACCAGGAGCCGGTGACATACACAGCTATTGACCCTGGCCTGCAAGATGCTCTTCACCAGTGTGTCAACA GCAGGTGCAGTCAGAGGCTGGAAAGTGGGGACTGTTTTGGGGTGCTGGATTGTGAATGGTGCATGGTGGACAGTGATGGAAAGACTCACC TGGACAAACCCTACTGTGCCCCCCAGAAAGAATGCTTCGGGGGGATTGTGGGAGCCAAAAGTCCCTACGTTGATGACATGGGAGCAATAG GTGATGAGGTGATCACATTAAACATGATTAAAAGCGCCCCTGTGGGTCCTGTGGCTGGAGGGATCATGGGATGCATCATGGTCTTGGTCC TGGCGGTGTATGCCTACCGCCACCAGATTCATCGCCGGAGCCATCAGCATATGTCTCCTCTTGCTGCCCAAGAAATGTCAGTGCGTATGT CCAACCTGGAGAATGACAGAGATGAAAGGGACGACGACAGCCACGAAGACAGAGGCATCATCAGCAACACTCGGTTTATAGCTGCGGTCA TCGAACGACATGCACACAGTCCAGAAAGAAGGCGCCGCTACTGGGGTCGATCAGGAACAGAAAGTGATCATGGTTACAGCACCATGAGCC CACAGGAGGACAGTGAAAATCCTCCATGCAACAATGACCCCTTGTCAGCCGGGGTCGATGTGGGAAACCATGATGAGGACTTAGACCTGG ATACCCCCCCTCAGACTGCTGCCCTACTAAGTCACAAGTTCCACCACTACCGGTCACACCACCCTACACTTCATCATAGCCACCACTTAC AGGCGGCCGTCACGGTACACACTGTCGATGCAGAATGCTAACAATCTCCTCACCTCCACGCCAAGATGAGATCTGGGAGCTACAGAATGT TCTGGAAAGAAAAAGAACCGGCTTAAAACCCACAGCAAGAGACCTCCCTTGTGTTTGTGCTTTGTGCAGAGTTGTTTGAGTCATTTCCTG CCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACATTTGTGAAGATGTGAGGCTGGTTCTGAAATGGAGGGGAAATAAGC CTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAAGTGAAGCTGAGCC AGAGGAATGTTCCAAAGAGCCAGAAGCATTCAGCTCTCCTTAACTGGAAGAGAGAAAAATCTGCTCACCCAGAGACTGGAATGTGGCACA TGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGCGGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCT CTAAACGATGCATCTCAGAATTTCTAAGTAAAGGATTATTTTTCTACTATTTATTGAACTTTCAAACATTCTCAAACTTTGGGGAAAAGG AAAGGAAACACAGGAGAAGTTTTCAGCAGTTGCCCCGAGCTGTTTTGTGTGTAATGAAGTGGTTCTTTGATTAAGGAGCTCTATTTCTTA TTTAACTGATATCCCACTGCCCCACTCCACAAAATAGGAAAATGAAGAAATCTTTCTCTCTGACTTGTTTACATCATTTCACGGAAACAC ATCTTTGTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGGAATTTAAGAGGTTTTAAAAGAAATGTTAT GTTTCTTATGACTTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTTAGAACCGCATCCTTTCAGCTAAGG GAGGGTTGGATTTATTTTCCTTGTTTTAGAGACTACAAATTTTTAAATATCCCATTTTGACTGAGAATATTGACATATAAGGGAAGAAGT TTTCTAAATTGTGAAAGTCTGGTTCTTAATTAAAGAATTTTTTTTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTAT CCACCAAATTGCTTTGTGATTTATACAGGGATTAATCAAATCTGGCTACTATAACATGGGGCATTGTAACTTTAAAGTAGTGTTTTAATT ACAGTGATGTATTTTAGACTCACATTTTGTGATTCAAATATGTTATAAAGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCT CCGTTTATATGTAGTTGGAAAAAATTCACTGAATAATGTTTTAATGATAGGGTATTATGATACAATGTAAAAAACAATTGGTTCTTCAGC AGTACAGAAAGTAAACTATATATGTGCTATCAGGAAACCCCTTCATACTGTGTATAAAATTGCAATCTAGTGAAATAAACCGTATGCAAT >In-frame_ENST00000420015_ENST00000371073_TCGA-4W-AA9S-01A_PARN_chr16_14687158_-_CACHD1_chr1_65016277_length(amino acids)=1485AA_start in transcript=83_stop in transcript=4540 MRRARARVGPRFRPLCRMEIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVSALTNGFDTPEERSSPDVKFVCQSSSIDFLASQ GFDFNKVFRNGIPYLNQEEERQLREQYDEKRSQANGAGALSYVSPNTSKCPVTIPEDQKKFIDQVVEKIEDLLQSEENKNLDLEPCTGFQ RKLIYQTLSWKYPKGIHVETLETEKKERYIVISKVDEEERKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQ FYCPLPARIFNSFVYTEKISNGESEVQQLAKKIREKFNRYLDVVNRNKQVVEASYTAHLTSPLTAIQDCCTIPPSMMEFDGNFNTNVSRT ISCDRLSTTVNSRAFNPGRDLNSVLADNLKSNPGIKWQYFSSEEGIFTVFPAHKFRCKGSYEHRSRPIYVSTVRPQSKHIVVILDHGASV TDTQLQIAKDAAQVILSAIDEHDKISVLTVADTVRTCSLDQCYKTFLSPATSETKRKMSTFVSSVKSSDSPTQHAVGFQKAFQLIRSTNN NTKFQANTDMVIIYLSAGITSKDSSEEDKKATLQVINEENSFLNNSVMILTYALMNDGVTGLKELAFLRDLAEQNSGKYGVPDRMALPVI KGSMMVLNQLSNLETTVGRFYTNLPNRMIDEAVFSLPFSDEMGDGLIMTVSKPCYFGNLLLGIVGVDVNLAYILEDVTYYQDSLASYTFL IDDKGYTLMHPSLTRPYLLSEPPLHTDIIHYENIPKFELVRQNILSLPLGSQIIAVPVNSSLSWHINKLRETGKEAYNVSYAWKMVQDTS FILCIVVIQPEIPVKQLKNLNTVPSSKLLYHRLDLLGQPSACLHFKQLATLESPTIMLSAGSFSSPYEHLSQPETKRMVEHYTAYLSDNT RLIANPGLKFSVRNEVMATSHVTDEWMTQMEMSSLNTYIVRRYIATPNGVLRIYPGSLMDKAFDPTRRQWYLHAVANPGLISLTGPYLDV GGAGYVVTISHTIHSSSTQLSSGHTVAVMGIDFTLRYFYKVLMDLLPVCNQDGGNKIRCFIMEDRGYLVAHPTLIDPKGHAPVEQQHITH KEPLVANDILNHPNFVKKNLCNSFSDRTVQRFYKFNTSLAGDLTNLVHGSHCSKYRLARIPGTNAFVGIVNETCDSLAFCACSMVDRLCL NCHRMEQNECECPCECPLEVNECTGNLTNAENRNPSCEVHQEPVTYTAIDPGLQDALHQCVNSRCSQRLESGDCFGVLDCEWCMVDSDGK THLDKPYCAPQKECFGGIVGAKSPYVDDMGAIGDEVITLNMIKSAPVGPVAGGIMGCIMVLVLAVYAYRHQIHRRSHQHMSPLAAQEMSV RMSNLENDRDERDDDSHEDRGIISNTRFIAAVIERHAHSPERRRRYWGRSGTESDHGYSTMSPQEDSENPPCNNDPLSAGVDVGNHDEDL -------------------------------------------------------------- >In-frame_ENST00000420015_ENST00000290039_TCGA-4W-AA9S-01A_PARN_chr16_14687158_-_CACHD1_chr1_65016277_length(transcript)=6038nt_BP=914nt TTTCCGGAAGTCGCGGCCGGCGTCACCGCTGCGGCTGCCTCAGCTACTGCCGCAGTCGCCGCGGAATTCGGCGAGTAGAACCGCTGAGGC GGGCGCGGGCCCGGGTGGGGCCAAGGTTCCGGCCACTCTGCAGAATGGAGATAATCAGGAGCAATTTTAAGAGTAATCTTCACAAAGTGT ACCAGGCCATAGAGGAGGCCGACTTCTTCGCCATCGATGGGGAGTTTTCAGGAATCAGTGATGGACCTTCAGTCTCTGCATTAACAAATG GTTTTGACACTCCAGAAGAGAGATCCTCACCAGATGTCAAATTTGTTTGTCAGAGCTCCAGCATTGACTTTCTAGCAAGCCAGGGATTTG ATTTTAATAAAGTTTTTCGAAATGGAATTCCATATTTAAATCAGGAAGAAGAAAGACAGTTAAGAGAGCAGTATGATGAAAAACGTTCAC AGGCGAATGGTGCAGGAGCTCTGTCCTATGTATCTCCTAACACTTCAAAATGTCCTGTCACGATTCCTGAGGATCAAAAGAAGTTTATTG ACCAAGTGGTAGAGAAAATAGAGGATTTATTACAAAGTGAAGAAAACAAGAACTTGGATTTAGAGCCATGTACCGGGTTCCAAAGAAAAC TAATTTATCAGACTTTGAGCTGGAAGTATCCGAAAGGCATTCATGTTGAGACTTTAGAAACTGAAAAGAAGGAGCGATATATAGTTATCA GCAAAGTAGATGAAGAAGAACGCAAAAGAAGAGAGCAGCAGAAACATGCCAAAGAACAGGAGGAGCTGAATGATGCTGTGGGATTTTCTA GAGTCATTCACGCCATTGCTAATTCGGGAAAACTTGTTATTGGACACAATATGCTCTTGGACGTCATGCACACAGTTCATCAGTTCTACT GCCCTCTGCCTGCGCGGATATTCAACTCCTTTGTTTACACTGAGAAAATCTCAAATGGAGAAAGTGAAGTACAGCAGCTAGCCAAAAAAA TCCGAGAGAAGTTCAACCGTTACTTGGATGTGGTCAATCGGAACAAGCAAGTTGTAGAAGCATCCTATACGGCTCACCTAACCTCTCCCC TAACTGCAATTCAAGACTGCTGTACTATCCCACCTTCCATGATGGAATTCGATGGGAACTTTAATACCAATGTGTCTAGAACAATTAGTT GTGATCGACTTTCTACTACTGTTAATAGCCGGGCCTTCAATCCAGGACGAGACTTAAATTCAGTTCTTGCAGACAACCTGAAATCCAACC CTGGAATTAAGTGGCAATATTTCAGTTCAGAAGAAGGAATTTTCACTGTTTTCCCAGCACACAAGTTCCGGTGTAAGGGCAGCTACGAAC ACCGCAGTAGACCCATCTACGTCTCTACAGTCCGGCCGCAGTCAAAGCACATAGTAGTGATTCTGGACCACGGGGCTTCAGTCACAGACA CTCAGCTTCAGATTGCCAAGGACGCTGCTCAGGTCATCCTCAGCGCCATCGATGAACATGACAAGATTTCTGTGTTAACTGTGGCAGATA CCGTCCGGACTTGCTCACTAGACCAGTGCTATAAGACCTTCTTGTCTCCAGCCACCAGTGAGACAAAAAGGAAAATGTCCACCTTTGTTA GCAGCGTGAAGTCTTCAGACAGTCCTACCCAGCACGCAGTGGGATTCCAAAAGGCATTTCAGCTGATTCGAAGTACAAACAATAACACAA AGTTCCAAGCAAATACAGACATGGTCATCATTTACCTGTCAGCTGGCATTACATCAAAGGACTCTTCGGAAGAAGATAAAAAAGCGACTC TCCAAGTCATCAATGAAGAAAATAGCTTTCTAAACAACTCTGTAATGATTCTCACCTATGCCCTCATGAACGATGGGGTGACTGGTTTGA AAGAGCTGGCTTTTCTGAGGGATCTAGCTGAACAGAATTCAGGGAAGTACGGTGTGCCAGACCGGATGGCCTTGCCTGTGATTAAGGGCA GCATGATGGTGCTGAATCAGTTGAGCAACCTGGAGACCACAGTGGGCAGGTTCTACACAAACCTTCCCAACCGGATGATTGATGAAGCCG TCTTCAGCCTGCCCTTCTCTGATGAGATGGGAGATGGTTTGATAATGACTGTGAGTAAACCCTGTTATTTTGGAAACCTACTTCTGGGAA TTGTAGGTGTGGACGTGAATCTGGCTTACATTCTTGAAGACGTGACGTATTACCAAGACTCTTTGGCTTCCTATACTTTTCTCATAGACG ACAAAGGATATACACTTATGCACCCATCTCTTACCAGGCCATATTTATTGTCAGAGCCCCCACTTCATACTGACATCATACATTATGAAA ATATTCCAAAATTTGAATTAGTTCGGCAAAATATCCTAAGCCTCCCTCTGGGCAGCCAGATTATCGCAGTCCCTGTGAACTCATCCCTGT CTTGGCACATAAACAAGCTGAGAGAAACTGGAAAGGAAGCCTACAATGTTAGCTATGCCTGGAAGATGGTACAAGACACTTCCTTTATTC TGTGTATTGTGGTGATACAACCAGAAATACCTGTGAAACAACTGAAGAACCTCAACACTGTTCCCAGCAGCAAGCTGCTGTACCACCGGC TGGATCTCCTTGGCCAGCCCAGTGCTTGCCTCCACTTCAAACAGCTGGCAACCCTAGAAAGTCCCACCATCATGCTGTCTGCTGGCAGCT TTTCCTCCCCCTATGAGCACCTCAGCCAGCCAGAGACAAAGCGCATGGTAGAGCACTACACCGCCTATCTCAGCGACAACACCCGCCTCA TTGCTAACCCGGGCCTCAAATTCTCTGTCAGAAATGAAGTAATGGCTACCAGCCACGTCACAGATGAATGGATGACACAAATGGAAATGA GTAGCCTGAACACTTACATTGTCCGCCGTTACATAGCAACACCCAATGGCGTCCTCAGAATTTATCCTGGTTCCCTCATGGACAAAGCAT TTGATCCCACTAGGAGACAATGGTATCTCCATGCAGTAGCTAATCCAGGGTTGATTTCTTTGACTGGTCCTTACTTAGATGTTGGAGGAG CTGGTTATGTTGTGACAATCAGTCACACAATTCATTCATCCAGTACACAGCTGTCTTCTGGGCACACTGTGGCTGTGATGGGCATTGACT TCACACTCAGATACTTCTACAAAGTTCTGATGGACCTATTACCTGTCTGTAACCAAGATGGTGGCAACAAAATAAGGTGCTTCATAATGG AGGACAGGGGTTATCTGGTGGCGCACCCGACTCTCATCGACCCCAAAGGACATGCACCTGTGGAGCAGCAGCACATCACCCACAAGGAGC CCCTGGTAGCAAATGATATCCTCAACCACCCCAACTTTGTAAAGAAAAACCTGTGCAACAGCTTCAGTGACAGAACGGTCCAGAGGTTTT ATAAATTCAACACCAGCCTTGCGGGGGATTTGACGAACCTTGTGCATGGCAGCCACTGTTCCAAATACAGATTAGCAAGGATCCCAGGAA CCAACGCGTTTGTTGGCATTGTCAACGAAACCTGCGACTCTCTTGCCTTCTGTGCCTGCAGCATGGTGGACCGACTCTGTCTCAACTGTC ACCGAATGGAACAAAATGAATGTGAATGTCCTTGTGAGTGCCCTCTAGAGGTCAATGAGTGCACTGGCAACCTCACCAATGCAGAGAACC GAAACCCCAGCTGCGAGGTCCACCAGGAGCCGGTGACATACACAGCTATTGACCCTGGCCTGCAAGATGCTCTTCACCAGTGTGTCAACA GCAGGTGCAGTCAGAGGCTGGAAAGTGGGGACTGTTTTGGGGTGCTGGATTGTGAATGGTGCATGGTGGACAGTGATGGAAAGACTCACC TGGACAAACCCTACTGTGCCCCCCAGAAAGAATGCTTCGGGGGGATTGTGGGAGCCAAAAGTCCCTACGTTGATGACATGGGAGCAATAG GTGATGAGGTGATCACATTAAACATGATTAAAAGCGCCCCTGTGGGTCCTGTGGCTGGAGGGATCATGGGATGCATCATGGTCTTGGTCC TGGCGGTGTATGCCTACCGCCACCAGATTCATCGCCGGAGCCATCAGCATATGTCTCCTCTTGCTGCCCAAGAAATGTCAGTGCGTATGT CCAACCTGGAGAATGACAGAGATGAAAGGGACGACGACAGCCACGAAGACAGAGGCATCATCAGCAACACTCGGTTTATAGCTGCGGTCA TCGAACGACATGCACACAGTCCAGAAAGAAGGCGCCGCTACTGGGGTCGATCAGGAACAGAAAGTGATCATGGTTACAGCACCATGAGCC CACAGGAGGACAGTGAAAATCCTCCATGCAACAATGACCCCTTGTCAGCCGGGGTCGATGTGGGAAACCATGATGAGGACTTAGACCTGG ATACCCCCCCTCAGACTGCTGCCCTACTAAGTCACAAGTTCCACCACTACCGGTCACACCACCCTACACTTCATCATAGCCACCACTTAC AGGCGGCCGTCACGGTACACACTGTCGATGCAGAATGCTAACAATCTCCTCACCTCCACGCCAAGATGAGATCTGGGAGCTACAGAATGT TCTGGAAAGAAAAAGAACCGGCTTAAAACCCACAGCAAGAGACCTCCCTTGTGTTTGTGCTTTGTGCAGAGTTGTTTGAGTCATTTCCTG CCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACATTTGTGAAGATGTGAGGCTGGTTCTGAAATGGAGGGGAAATAAGC CTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAGAAGGCGAACCTCCAAACACAGAGACGGAACCTGCAAGTGAAGCTGAGCC AGAGGAATGTTCCAAAGAGCCAGAAGCATTCAGCTCTCCTTAACTGGAAGAGAGAAAAATCTGCTCACCCAGAGACTGGAATGTGGCACA TGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGCGGTACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCT CTAAACGATGCATCTCAGAATTTCTAAGTAAAGGATTATTTTTCTACTATTTATTGAACTTTCAAACATTCTCAAACTTTGGGGAAAAGG AAAGGAAACACAGGAGAAGTTTTCAGCAGTTGCCCCGAGCTGTTTTGTGTGTAATGAAGTGGTTCTTTGATTAAGGAGCTCTATTTCTTA TTTAACTGATATCCCACTGCCCCACTCCACAAAATAGGAAAATGAAGAAATCTTTCTCTCTGACTTGTTTACATCATTTCACGGAAACAC ATCTTTGTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGGGGAGGGGCAGAGGAATTTAAGAGGTTTTAAAAGAAATGTTAT GTTTCTTATGACTTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTTTCTACGAAACCTAATGTTAGAACCGCATCCTTTCAGCTAAGG GAGGGTTGGATTTATTTTCCTTGTTTTAGAGACTACAAATTTTTAAATATCCCATTTTGACTGAGAATATTGACATATAAGGGAAGAAGT TTTCTAAATTGTGAAAGTCTGGTTCTTAATTAAAGAATTTTTTTTTTAATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTAT CCACCAAATTGCTTTGTGATTTATACAGGGATTAATCAAATCTGGCTACTATAACATGGGGCATTGTAACTTTAAAGTAGTGTTTTAATT ACAGTGATGTATTTTAGACTCACATTTTGTGATTCAAATATGTTATAAAGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCT CCGTTTATATGTAGTTGGAAAAAATTCACTGAATAATGTTTTAATGATAGGGTATTATGATACAATGTAAAAAACAATTGGTTCTTCAGC AGTACAGAAAGTAAACTATATATGTGCTATCAGGAAACCCCTTCATACTGTGTATAAAATTGCAATCTAGTGAAATAAACCGTATGCAAT >In-frame_ENST00000420015_ENST00000290039_TCGA-4W-AA9S-01A_PARN_chr16_14687158_-_CACHD1_chr1_65016277_length(amino acids)=1485AA_start in transcript=83_stop in transcript=4540 MRRARARVGPRFRPLCRMEIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVSALTNGFDTPEERSSPDVKFVCQSSSIDFLASQ GFDFNKVFRNGIPYLNQEEERQLREQYDEKRSQANGAGALSYVSPNTSKCPVTIPEDQKKFIDQVVEKIEDLLQSEENKNLDLEPCTGFQ RKLIYQTLSWKYPKGIHVETLETEKKERYIVISKVDEEERKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQ FYCPLPARIFNSFVYTEKISNGESEVQQLAKKIREKFNRYLDVVNRNKQVVEASYTAHLTSPLTAIQDCCTIPPSMMEFDGNFNTNVSRT ISCDRLSTTVNSRAFNPGRDLNSVLADNLKSNPGIKWQYFSSEEGIFTVFPAHKFRCKGSYEHRSRPIYVSTVRPQSKHIVVILDHGASV TDTQLQIAKDAAQVILSAIDEHDKISVLTVADTVRTCSLDQCYKTFLSPATSETKRKMSTFVSSVKSSDSPTQHAVGFQKAFQLIRSTNN NTKFQANTDMVIIYLSAGITSKDSSEEDKKATLQVINEENSFLNNSVMILTYALMNDGVTGLKELAFLRDLAEQNSGKYGVPDRMALPVI KGSMMVLNQLSNLETTVGRFYTNLPNRMIDEAVFSLPFSDEMGDGLIMTVSKPCYFGNLLLGIVGVDVNLAYILEDVTYYQDSLASYTFL IDDKGYTLMHPSLTRPYLLSEPPLHTDIIHYENIPKFELVRQNILSLPLGSQIIAVPVNSSLSWHINKLRETGKEAYNVSYAWKMVQDTS FILCIVVIQPEIPVKQLKNLNTVPSSKLLYHRLDLLGQPSACLHFKQLATLESPTIMLSAGSFSSPYEHLSQPETKRMVEHYTAYLSDNT RLIANPGLKFSVRNEVMATSHVTDEWMTQMEMSSLNTYIVRRYIATPNGVLRIYPGSLMDKAFDPTRRQWYLHAVANPGLISLTGPYLDV GGAGYVVTISHTIHSSSTQLSSGHTVAVMGIDFTLRYFYKVLMDLLPVCNQDGGNKIRCFIMEDRGYLVAHPTLIDPKGHAPVEQQHITH KEPLVANDILNHPNFVKKNLCNSFSDRTVQRFYKFNTSLAGDLTNLVHGSHCSKYRLARIPGTNAFVGIVNETCDSLAFCACSMVDRLCL NCHRMEQNECECPCECPLEVNECTGNLTNAENRNPSCEVHQEPVTYTAIDPGLQDALHQCVNSRCSQRLESGDCFGVLDCEWCMVDSDGK THLDKPYCAPQKECFGGIVGAKSPYVDDMGAIGDEVITLNMIKSAPVGPVAGGIMGCIMVLVLAVYAYRHQIHRRSHQHMSPLAAQEMSV RMSNLENDRDERDDDSHEDRGIISNTRFIAAVIERHAHSPERRRRYWGRSGTESDHGYSTMSPQEDSENPPCNNDPLSAGVDVGNHDEDL -------------------------------------------------------------- >In-frame_ENST00000539279_ENST00000371073_TCGA-4W-AA9S-01A_PARN_chr16_14687158_-_CACHD1_chr1_65016277_length(transcript)=5630nt_BP=506nt GTCACCGCTGCGGCTGCCTCAGCTACTGCCGCAGTCGCCGCGGAATTCGGCGAGTAGAACCGCTGAGGCGGGCGCGGGCCCGGGTGGGGC CAAGGTTCCGGCCACTCTGCAGAATGGAGATAATCAGGAGCAATTTTAAGAGTAATCTTCACAAAGTGTACCAGGCCATAGAGGAGGCCG ACTTCTTCGCCATCGATGGGGAGTTTTCAGGAATCAGTGATGGACCTTCAGTCTCTGCATTAACAAATGGTTTTGACACTCCAGAAGAGA GGTATCAGAAGCTTAAAAAGAAGGAGCGATATATAGTTATCAGCAAAGTAGATGAAGAAGAACGCAAAAGAAGAGAGCAGCAGAAACATG CCAAAGAACAGGAGGAGCTGAATGATGCTGTGGGATTTTCTAGAGTCATTCACGCCATTGCTAATTCGGGAAAACTTGTTATTGGACACA ATATGCTCTTGGACGTCATGCACACAGTTCATCAGTTCTACTGCCCTCTGCCTGCGCGGATATTCAACTCCTTTGTTTACACTGAGAAAA TCTCAAATGGAGAAAGTGAAGTACAGCAGCTAGCCAAAAAAATCCGAGAGAAGTTCAACCGTTACTTGGATGTGGTCAATCGGAACAAGC AAGTTGTAGAAGCATCCTATACGGCTCACCTAACCTCTCCCCTAACTGCAATTCAAGACTGCTGTACTATCCCACCTTCCATGATGGAAT TCGATGGGAACTTTAATACCAATGTGTCTAGAACAATTAGTTGTGATCGACTTTCTACTACTGTTAATAGCCGGGCCTTCAATCCAGGAC GAGACTTAAATTCAGTTCTTGCAGACAACCTGAAATCCAACCCTGGAATTAAGTGGCAATATTTCAGTTCAGAAGAAGGAATTTTCACTG TTTTCCCAGCACACAAGTTCCGGTGTAAGGGCAGCTACGAACACCGCAGTAGACCCATCTACGTCTCTACAGTCCGGCCGCAGTCAAAGC ACATAGTAGTGATTCTGGACCACGGGGCTTCAGTCACAGACACTCAGCTTCAGATTGCCAAGGACGCTGCTCAGGTCATCCTCAGCGCCA TCGATGAACATGACAAGATTTCTGTGTTAACTGTGGCAGATACCGTCCGGACTTGCTCACTAGACCAGTGCTATAAGACCTTCTTGTCTC CAGCCACCAGTGAGACAAAAAGGAAAATGTCCACCTTTGTTAGCAGCGTGAAGTCTTCAGACAGTCCTACCCAGCACGCAGTGGGATTCC AAAAGGCATTTCAGCTGATTCGAAGTACAAACAATAACACAAAGTTCCAAGCAAATACAGACATGGTCATCATTTACCTGTCAGCTGGCA TTACATCAAAGGACTCTTCGGAAGAAGATAAAAAAGCGACTCTCCAAGTCATCAATGAAGAAAATAGCTTTCTAAACAACTCTGTAATGA TTCTCACCTATGCCCTCATGAACGATGGGGTGACTGGTTTGAAAGAGCTGGCTTTTCTGAGGGATCTAGCTGAACAGAATTCAGGGAAGT ACGGTGTGCCAGACCGGATGGCCTTGCCTGTGATTAAGGGCAGCATGATGGTGCTGAATCAGTTGAGCAACCTGGAGACCACAGTGGGCA GGTTCTACACAAACCTTCCCAACCGGATGATTGATGAAGCCGTCTTCAGCCTGCCCTTCTCTGATGAGATGGGAGATGGTTTGATAATGA CTGTGAGTAAACCCTGTTATTTTGGAAACCTACTTCTGGGAATTGTAGGTGTGGACGTGAATCTGGCTTACATTCTTGAAGACGTGACGT ATTACCAAGACTCTTTGGCTTCCTATACTTTTCTCATAGACGACAAAGGATATACACTTATGCACCCATCTCTTACCAGGCCATATTTAT TGTCAGAGCCCCCACTTCATACTGACATCATACATTATGAAAATATTCCAAAATTTGAATTAGTTCGGCAAAATATCCTAAGCCTCCCTC TGGGCAGCCAGATTATCGCAGTCCCTGTGAACTCATCCCTGTCTTGGCACATAAACAAGCTGAGAGAAACTGGAAAGGAAGCCTACAATG TTAGCTATGCCTGGAAGATGGTACAAGACACTTCCTTTATTCTGTGTATTGTGGTGATACAACCAGAAATACCTGTGAAACAACTGAAGA ACCTCAACACTGTTCCCAGCAGCAAGCTGCTGTACCACCGGCTGGATCTCCTTGGCCAGCCCAGTGCTTGCCTCCACTTCAAACAGCTGG CAACCCTAGAAAGTCCCACCATCATGCTGTCTGCTGGCAGCTTTTCCTCCCCCTATGAGCACCTCAGCCAGCCAGAGACAAAGCGCATGG TAGAGCACTACACCGCCTATCTCAGCGACAACACCCGCCTCATTGCTAACCCGGGCCTCAAATTCTCTGTCAGAAATGAAGTAATGGCTA CCAGCCACGTCACAGATGAATGGATGACACAAATGGAAATGAGTAGCCTGAACACTTACATTGTCCGCCGTTACATAGCAACACCCAATG GCGTCCTCAGAATTTATCCTGGTTCCCTCATGGACAAAGCATTTGATCCCACTAGGAGACAATGGTATCTCCATGCAGTAGCTAATCCAG GGTTGATTTCTTTGACTGGTCCTTACTTAGATGTTGGAGGAGCTGGTTATGTTGTGACAATCAGTCACACAATTCATTCATCCAGTACAC AGCTGTCTTCTGGGCACACTGTGGCTGTGATGGGCATTGACTTCACACTCAGATACTTCTACAAAGTTCTGATGGACCTATTACCTGTCT GTAACCAAGATGGTGGCAACAAAATAAGGTGCTTCATAATGGAGGACAGGGGTTATCTGGTGGCGCACCCGACTCTCATCGACCCCAAAG GACATGCACCTGTGGAGCAGCAGCACATCACCCACAAGGAGCCCCTGGTAGCAAATGATATCCTCAACCACCCCAACTTTGTAAAGAAAA ACCTGTGCAACAGCTTCAGTGACAGAACGGTCCAGAGGTTTTATAAATTCAACACCAGCCTTGCGGGGGATTTGACGAACCTTGTGCATG GCAGCCACTGTTCCAAATACAGATTAGCAAGGATCCCAGGAACCAACGCGTTTGTTGGCATTGTCAACGAAACCTGCGACTCTCTTGCCT TCTGTGCCTGCAGCATGGTGGACCGACTCTGTCTCAACTGTCACCGAATGGAACAAAATGAATGTGAATGTCCTTGTGAGTGCCCTCTAG AGGTCAATGAGTGCACTGGCAACCTCACCAATGCAGAGAACCGAAACCCCAGCTGCGAGGTCCACCAGGAGCCGGTGACATACACAGCTA TTGACCCTGGCCTGCAAGATGCTCTTCACCAGTGTGTCAACAGCAGGTGCAGTCAGAGGCTGGAAAGTGGGGACTGTTTTGGGGTGCTGG ATTGTGAATGGTGCATGGTGGACAGTGATGGAAAGACTCACCTGGACAAACCCTACTGTGCCCCCCAGAAAGAATGCTTCGGGGGGATTG TGGGAGCCAAAAGTCCCTACGTTGATGACATGGGAGCAATAGGTGATGAGGTGATCACATTAAACATGATTAAAAGCGCCCCTGTGGGTC CTGTGGCTGGAGGGATCATGGGATGCATCATGGTCTTGGTCCTGGCGGTGTATGCCTACCGCCACCAGATTCATCGCCGGAGCCATCAGC ATATGTCTCCTCTTGCTGCCCAAGAAATGTCAGTGCGTATGTCCAACCTGGAGAATGACAGAGATGAAAGGGACGACGACAGCCACGAAG ACAGAGGCATCATCAGCAACACTCGGTTTATAGCTGCGGTCATCGAACGACATGCACACAGTCCAGAAAGAAGGCGCCGCTACTGGGGTC GATCAGGAACAGAAAGTGATCATGGTTACAGCACCATGAGCCCACAGGAGGACAGTGAAAATCCTCCATGCAACAATGACCCCTTGTCAG CCGGGGTCGATGTGGGAAACCATGATGAGGACTTAGACCTGGATACCCCCCCTCAGACTGCTGCCCTACTAAGTCACAAGTTCCACCACT ACCGGTCACACCACCCTACACTTCATCATAGCCACCACTTACAGGCGGCCGTCACGGTACACACTGTCGATGCAGAATGCTAACAATCTC CTCACCTCCACGCCAAGATGAGATCTGGGAGCTACAGAATGTTCTGGAAAGAAAAAGAACCGGCTTAAAACCCACAGCAAGAGACCTCCC TTGTGTTTGTGCTTTGTGCAGAGTTGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACATTT GTGAAGATGTGAGGCTGGTTCTGAAATGGAGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAGAAGGCGA ACCTCCAAACACAGAGACGGAACCTGCAAGTGAAGCTGAGCCAGAGGAATGTTCCAAAGAGCCAGAAGCATTCAGCTCTCCTTAACTGGA AGAGAGAAAAATCTGCTCACCCAGAGACTGGAATGTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGCGG TACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATGCATCTCAGAATTTCTAAGTAAAGGATTATTTTTCTACT ATTTATTGAACTTTCAAACATTCTCAAACTTTGGGGAAAAGGAAAGGAAACACAGGAGAAGTTTTCAGCAGTTGCCCCGAGCTGTTTTGT GTGTAATGAAGTGGTTCTTTGATTAAGGAGCTCTATTTCTTATTTAACTGATATCCCACTGCCCCACTCCACAAAATAGGAAAATGAAGA AATCTTTCTCTCTGACTTGTTTACATCATTTCACGGAAACACATCTTTGTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGG GGAGGGGCAGAGGAATTTAAGAGGTTTTAAAAGAAATGTTATGTTTCTTATGACTTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTT TCTACGAAACCTAATGTTAGAACCGCATCCTTTCAGCTAAGGGAGGGTTGGATTTATTTTCCTTGTTTTAGAGACTACAAATTTTTAAAT ATCCCATTTTGACTGAGAATATTGACATATAAGGGAAGAAGTTTTCTAAATTGTGAAAGTCTGGTTCTTAATTAAAGAATTTTTTTTTTA ATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAAATTGCTTTGTGATTTATACAGGGATTAATCAAATCTGGCTA CTATAACATGGGGCATTGTAACTTTAAAGTAGTGTTTTAATTACAGTGATGTATTTTAGACTCACATTTTGTGATTCAAATATGTTATAA AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAAAAAATTCACTGAATAATGTTTTAATGAT AGGGTATTATGATACAATGTAAAAAACAATTGGTTCTTCAGCAGTACAGAAAGTAAACTATATATGTGCTATCAGGAAACCCCTTCATAC >In-frame_ENST00000539279_ENST00000371073_TCGA-4W-AA9S-01A_PARN_chr16_14687158_-_CACHD1_chr1_65016277_length(amino acids)=1356AA_start in transcript=62_stop in transcript=4132 MRRARARVGPRFRPLCRMEIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVSALTNGFDTPEERYQKLKKKERYIVISKVDEEE RKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQFYCPLPARIFNSFVYTEKISNGESEVQQLAKKIREKFNR YLDVVNRNKQVVEASYTAHLTSPLTAIQDCCTIPPSMMEFDGNFNTNVSRTISCDRLSTTVNSRAFNPGRDLNSVLADNLKSNPGIKWQY FSSEEGIFTVFPAHKFRCKGSYEHRSRPIYVSTVRPQSKHIVVILDHGASVTDTQLQIAKDAAQVILSAIDEHDKISVLTVADTVRTCSL DQCYKTFLSPATSETKRKMSTFVSSVKSSDSPTQHAVGFQKAFQLIRSTNNNTKFQANTDMVIIYLSAGITSKDSSEEDKKATLQVINEE NSFLNNSVMILTYALMNDGVTGLKELAFLRDLAEQNSGKYGVPDRMALPVIKGSMMVLNQLSNLETTVGRFYTNLPNRMIDEAVFSLPFS DEMGDGLIMTVSKPCYFGNLLLGIVGVDVNLAYILEDVTYYQDSLASYTFLIDDKGYTLMHPSLTRPYLLSEPPLHTDIIHYENIPKFEL VRQNILSLPLGSQIIAVPVNSSLSWHINKLRETGKEAYNVSYAWKMVQDTSFILCIVVIQPEIPVKQLKNLNTVPSSKLLYHRLDLLGQP SACLHFKQLATLESPTIMLSAGSFSSPYEHLSQPETKRMVEHYTAYLSDNTRLIANPGLKFSVRNEVMATSHVTDEWMTQMEMSSLNTYI VRRYIATPNGVLRIYPGSLMDKAFDPTRRQWYLHAVANPGLISLTGPYLDVGGAGYVVTISHTIHSSSTQLSSGHTVAVMGIDFTLRYFY KVLMDLLPVCNQDGGNKIRCFIMEDRGYLVAHPTLIDPKGHAPVEQQHITHKEPLVANDILNHPNFVKKNLCNSFSDRTVQRFYKFNTSL AGDLTNLVHGSHCSKYRLARIPGTNAFVGIVNETCDSLAFCACSMVDRLCLNCHRMEQNECECPCECPLEVNECTGNLTNAENRNPSCEV HQEPVTYTAIDPGLQDALHQCVNSRCSQRLESGDCFGVLDCEWCMVDSDGKTHLDKPYCAPQKECFGGIVGAKSPYVDDMGAIGDEVITL NMIKSAPVGPVAGGIMGCIMVLVLAVYAYRHQIHRRSHQHMSPLAAQEMSVRMSNLENDRDERDDDSHEDRGIISNTRFIAAVIERHAHS PERRRRYWGRSGTESDHGYSTMSPQEDSENPPCNNDPLSAGVDVGNHDEDLDLDTPPQTAALLSHKFHHYRSHHPTLHHSHHLQAAVTVH -------------------------------------------------------------- >In-frame_ENST00000539279_ENST00000290039_TCGA-4W-AA9S-01A_PARN_chr16_14687158_-_CACHD1_chr1_65016277_length(transcript)=5630nt_BP=506nt GTCACCGCTGCGGCTGCCTCAGCTACTGCCGCAGTCGCCGCGGAATTCGGCGAGTAGAACCGCTGAGGCGGGCGCGGGCCCGGGTGGGGC CAAGGTTCCGGCCACTCTGCAGAATGGAGATAATCAGGAGCAATTTTAAGAGTAATCTTCACAAAGTGTACCAGGCCATAGAGGAGGCCG ACTTCTTCGCCATCGATGGGGAGTTTTCAGGAATCAGTGATGGACCTTCAGTCTCTGCATTAACAAATGGTTTTGACACTCCAGAAGAGA GGTATCAGAAGCTTAAAAAGAAGGAGCGATATATAGTTATCAGCAAAGTAGATGAAGAAGAACGCAAAAGAAGAGAGCAGCAGAAACATG CCAAAGAACAGGAGGAGCTGAATGATGCTGTGGGATTTTCTAGAGTCATTCACGCCATTGCTAATTCGGGAAAACTTGTTATTGGACACA ATATGCTCTTGGACGTCATGCACACAGTTCATCAGTTCTACTGCCCTCTGCCTGCGCGGATATTCAACTCCTTTGTTTACACTGAGAAAA TCTCAAATGGAGAAAGTGAAGTACAGCAGCTAGCCAAAAAAATCCGAGAGAAGTTCAACCGTTACTTGGATGTGGTCAATCGGAACAAGC AAGTTGTAGAAGCATCCTATACGGCTCACCTAACCTCTCCCCTAACTGCAATTCAAGACTGCTGTACTATCCCACCTTCCATGATGGAAT TCGATGGGAACTTTAATACCAATGTGTCTAGAACAATTAGTTGTGATCGACTTTCTACTACTGTTAATAGCCGGGCCTTCAATCCAGGAC GAGACTTAAATTCAGTTCTTGCAGACAACCTGAAATCCAACCCTGGAATTAAGTGGCAATATTTCAGTTCAGAAGAAGGAATTTTCACTG TTTTCCCAGCACACAAGTTCCGGTGTAAGGGCAGCTACGAACACCGCAGTAGACCCATCTACGTCTCTACAGTCCGGCCGCAGTCAAAGC ACATAGTAGTGATTCTGGACCACGGGGCTTCAGTCACAGACACTCAGCTTCAGATTGCCAAGGACGCTGCTCAGGTCATCCTCAGCGCCA TCGATGAACATGACAAGATTTCTGTGTTAACTGTGGCAGATACCGTCCGGACTTGCTCACTAGACCAGTGCTATAAGACCTTCTTGTCTC CAGCCACCAGTGAGACAAAAAGGAAAATGTCCACCTTTGTTAGCAGCGTGAAGTCTTCAGACAGTCCTACCCAGCACGCAGTGGGATTCC AAAAGGCATTTCAGCTGATTCGAAGTACAAACAATAACACAAAGTTCCAAGCAAATACAGACATGGTCATCATTTACCTGTCAGCTGGCA TTACATCAAAGGACTCTTCGGAAGAAGATAAAAAAGCGACTCTCCAAGTCATCAATGAAGAAAATAGCTTTCTAAACAACTCTGTAATGA TTCTCACCTATGCCCTCATGAACGATGGGGTGACTGGTTTGAAAGAGCTGGCTTTTCTGAGGGATCTAGCTGAACAGAATTCAGGGAAGT ACGGTGTGCCAGACCGGATGGCCTTGCCTGTGATTAAGGGCAGCATGATGGTGCTGAATCAGTTGAGCAACCTGGAGACCACAGTGGGCA GGTTCTACACAAACCTTCCCAACCGGATGATTGATGAAGCCGTCTTCAGCCTGCCCTTCTCTGATGAGATGGGAGATGGTTTGATAATGA CTGTGAGTAAACCCTGTTATTTTGGAAACCTACTTCTGGGAATTGTAGGTGTGGACGTGAATCTGGCTTACATTCTTGAAGACGTGACGT ATTACCAAGACTCTTTGGCTTCCTATACTTTTCTCATAGACGACAAAGGATATACACTTATGCACCCATCTCTTACCAGGCCATATTTAT TGTCAGAGCCCCCACTTCATACTGACATCATACATTATGAAAATATTCCAAAATTTGAATTAGTTCGGCAAAATATCCTAAGCCTCCCTC TGGGCAGCCAGATTATCGCAGTCCCTGTGAACTCATCCCTGTCTTGGCACATAAACAAGCTGAGAGAAACTGGAAAGGAAGCCTACAATG TTAGCTATGCCTGGAAGATGGTACAAGACACTTCCTTTATTCTGTGTATTGTGGTGATACAACCAGAAATACCTGTGAAACAACTGAAGA ACCTCAACACTGTTCCCAGCAGCAAGCTGCTGTACCACCGGCTGGATCTCCTTGGCCAGCCCAGTGCTTGCCTCCACTTCAAACAGCTGG CAACCCTAGAAAGTCCCACCATCATGCTGTCTGCTGGCAGCTTTTCCTCCCCCTATGAGCACCTCAGCCAGCCAGAGACAAAGCGCATGG TAGAGCACTACACCGCCTATCTCAGCGACAACACCCGCCTCATTGCTAACCCGGGCCTCAAATTCTCTGTCAGAAATGAAGTAATGGCTA CCAGCCACGTCACAGATGAATGGATGACACAAATGGAAATGAGTAGCCTGAACACTTACATTGTCCGCCGTTACATAGCAACACCCAATG GCGTCCTCAGAATTTATCCTGGTTCCCTCATGGACAAAGCATTTGATCCCACTAGGAGACAATGGTATCTCCATGCAGTAGCTAATCCAG GGTTGATTTCTTTGACTGGTCCTTACTTAGATGTTGGAGGAGCTGGTTATGTTGTGACAATCAGTCACACAATTCATTCATCCAGTACAC AGCTGTCTTCTGGGCACACTGTGGCTGTGATGGGCATTGACTTCACACTCAGATACTTCTACAAAGTTCTGATGGACCTATTACCTGTCT GTAACCAAGATGGTGGCAACAAAATAAGGTGCTTCATAATGGAGGACAGGGGTTATCTGGTGGCGCACCCGACTCTCATCGACCCCAAAG GACATGCACCTGTGGAGCAGCAGCACATCACCCACAAGGAGCCCCTGGTAGCAAATGATATCCTCAACCACCCCAACTTTGTAAAGAAAA ACCTGTGCAACAGCTTCAGTGACAGAACGGTCCAGAGGTTTTATAAATTCAACACCAGCCTTGCGGGGGATTTGACGAACCTTGTGCATG GCAGCCACTGTTCCAAATACAGATTAGCAAGGATCCCAGGAACCAACGCGTTTGTTGGCATTGTCAACGAAACCTGCGACTCTCTTGCCT TCTGTGCCTGCAGCATGGTGGACCGACTCTGTCTCAACTGTCACCGAATGGAACAAAATGAATGTGAATGTCCTTGTGAGTGCCCTCTAG AGGTCAATGAGTGCACTGGCAACCTCACCAATGCAGAGAACCGAAACCCCAGCTGCGAGGTCCACCAGGAGCCGGTGACATACACAGCTA TTGACCCTGGCCTGCAAGATGCTCTTCACCAGTGTGTCAACAGCAGGTGCAGTCAGAGGCTGGAAAGTGGGGACTGTTTTGGGGTGCTGG ATTGTGAATGGTGCATGGTGGACAGTGATGGAAAGACTCACCTGGACAAACCCTACTGTGCCCCCCAGAAAGAATGCTTCGGGGGGATTG TGGGAGCCAAAAGTCCCTACGTTGATGACATGGGAGCAATAGGTGATGAGGTGATCACATTAAACATGATTAAAAGCGCCCCTGTGGGTC CTGTGGCTGGAGGGATCATGGGATGCATCATGGTCTTGGTCCTGGCGGTGTATGCCTACCGCCACCAGATTCATCGCCGGAGCCATCAGC ATATGTCTCCTCTTGCTGCCCAAGAAATGTCAGTGCGTATGTCCAACCTGGAGAATGACAGAGATGAAAGGGACGACGACAGCCACGAAG ACAGAGGCATCATCAGCAACACTCGGTTTATAGCTGCGGTCATCGAACGACATGCACACAGTCCAGAAAGAAGGCGCCGCTACTGGGGTC GATCAGGAACAGAAAGTGATCATGGTTACAGCACCATGAGCCCACAGGAGGACAGTGAAAATCCTCCATGCAACAATGACCCCTTGTCAG CCGGGGTCGATGTGGGAAACCATGATGAGGACTTAGACCTGGATACCCCCCCTCAGACTGCTGCCCTACTAAGTCACAAGTTCCACCACT ACCGGTCACACCACCCTACACTTCATCATAGCCACCACTTACAGGCGGCCGTCACGGTACACACTGTCGATGCAGAATGCTAACAATCTC CTCACCTCCACGCCAAGATGAGATCTGGGAGCTACAGAATGTTCTGGAAAGAAAAAGAACCGGCTTAAAACCCACAGCAAGAGACCTCCC TTGTGTTTGTGCTTTGTGCAGAGTTGTTTGAGTCATTTCCTGCCTGTCGACATGGTTAAAAACGAGAGAAACAACAACACAGTCACATTT GTGAAGATGTGAGGCTGGTTCTGAAATGGAGGGGAAATAAGCCTGATGAACAGACCTGCCATAACACTAATGGAAGGTAACAGAAGGCGA ACCTCCAAACACAGAGACGGAACCTGCAAGTGAAGCTGAGCCAGAGGAATGTTCCAAAGAGCCAGAAGCATTCAGCTCTCCTTAACTGGA AGAGAGAAAAATCTGCTCACCCAGAGACTGGAATGTGGCACATGCAGATACAAATGTGTGCATTGAAGATTTCGCTTTGTTTCTTAGCGG TACCTGGATACCACAGTTGCTGTATGGAACTCATGTTATGCTCTAAACGATGCATCTCAGAATTTCTAAGTAAAGGATTATTTTTCTACT ATTTATTGAACTTTCAAACATTCTCAAACTTTGGGGAAAAGGAAAGGAAACACAGGAGAAGTTTTCAGCAGTTGCCCCGAGCTGTTTTGT GTGTAATGAAGTGGTTCTTTGATTAAGGAGCTCTATTTCTTATTTAACTGATATCCCACTGCCCCACTCCACAAAATAGGAAAATGAAGA AATCTTTCTCTCTGACTTGTTTACATCATTTCACGGAAACACATCTTTGTTTGTAATGCAGTATTCTTTCTCTGTGTTTGACAGAGATGG GGAGGGGCAGAGGAATTTAAGAGGTTTTAAAAGAAATGTTATGTTTCTTATGACTTGTTTCCACTCCTCGTACAATGCTATTCTTAGGTT TCTACGAAACCTAATGTTAGAACCGCATCCTTTCAGCTAAGGGAGGGTTGGATTTATTTTCCTTGTTTTAGAGACTACAAATTTTTAAAT ATCCCATTTTGACTGAGAATATTGACATATAAGGGAAGAAGTTTTCTAAATTGTGAAAGTCTGGTTCTTAATTAAAGAATTTTTTTTTTA ATATCACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAAATTGCTTTGTGATTTATACAGGGATTAATCAAATCTGGCTA CTATAACATGGGGCATTGTAACTTTAAAGTAGTGTTTTAATTACAGTGATGTATTTTAGACTCACATTTTGTGATTCAAATATGTTATAA AGGCATTCTTGCACCATGGTAAAGAATGTGTGTGGTAAATCTCCGTTTATATGTAGTTGGAAAAAATTCACTGAATAATGTTTTAATGAT AGGGTATTATGATACAATGTAAAAAACAATTGGTTCTTCAGCAGTACAGAAAGTAAACTATATATGTGCTATCAGGAAACCCCTTCATAC >In-frame_ENST00000539279_ENST00000290039_TCGA-4W-AA9S-01A_PARN_chr16_14687158_-_CACHD1_chr1_65016277_length(amino acids)=1356AA_start in transcript=62_stop in transcript=4132 MRRARARVGPRFRPLCRMEIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVSALTNGFDTPEERYQKLKKKERYIVISKVDEEE RKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQFYCPLPARIFNSFVYTEKISNGESEVQQLAKKIREKFNR YLDVVNRNKQVVEASYTAHLTSPLTAIQDCCTIPPSMMEFDGNFNTNVSRTISCDRLSTTVNSRAFNPGRDLNSVLADNLKSNPGIKWQY FSSEEGIFTVFPAHKFRCKGSYEHRSRPIYVSTVRPQSKHIVVILDHGASVTDTQLQIAKDAAQVILSAIDEHDKISVLTVADTVRTCSL DQCYKTFLSPATSETKRKMSTFVSSVKSSDSPTQHAVGFQKAFQLIRSTNNNTKFQANTDMVIIYLSAGITSKDSSEEDKKATLQVINEE NSFLNNSVMILTYALMNDGVTGLKELAFLRDLAEQNSGKYGVPDRMALPVIKGSMMVLNQLSNLETTVGRFYTNLPNRMIDEAVFSLPFS DEMGDGLIMTVSKPCYFGNLLLGIVGVDVNLAYILEDVTYYQDSLASYTFLIDDKGYTLMHPSLTRPYLLSEPPLHTDIIHYENIPKFEL VRQNILSLPLGSQIIAVPVNSSLSWHINKLRETGKEAYNVSYAWKMVQDTSFILCIVVIQPEIPVKQLKNLNTVPSSKLLYHRLDLLGQP SACLHFKQLATLESPTIMLSAGSFSSPYEHLSQPETKRMVEHYTAYLSDNTRLIANPGLKFSVRNEVMATSHVTDEWMTQMEMSSLNTYI VRRYIATPNGVLRIYPGSLMDKAFDPTRRQWYLHAVANPGLISLTGPYLDVGGAGYVVTISHTIHSSSTQLSSGHTVAVMGIDFTLRYFY KVLMDLLPVCNQDGGNKIRCFIMEDRGYLVAHPTLIDPKGHAPVEQQHITHKEPLVANDILNHPNFVKKNLCNSFSDRTVQRFYKFNTSL AGDLTNLVHGSHCSKYRLARIPGTNAFVGIVNETCDSLAFCACSMVDRLCLNCHRMEQNECECPCECPLEVNECTGNLTNAENRNPSCEV HQEPVTYTAIDPGLQDALHQCVNSRCSQRLESGDCFGVLDCEWCMVDSDGKTHLDKPYCAPQKECFGGIVGAKSPYVDDMGAIGDEVITL NMIKSAPVGPVAGGIMGCIMVLVLAVYAYRHQIHRRSHQHMSPLAAQEMSVRMSNLENDRDERDDDSHEDRGIISNTRFIAAVIERHAHS PERRRRYWGRSGTESDHGYSTMSPQEDSENPPCNNDPLSAGVDVGNHDEDLDLDTPPQTAALLSHKFHHYRSHHPTLHHSHHLQAAVTVH -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for PARN-CACHD1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for PARN-CACHD1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for PARN-CACHD1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | PARN | C4225347 | PULMONARY FIBROSIS AND/OR BONE MARROW FAILURE, TELOMERE-RELATED, 4 | 4 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
Hgene | PARN | C4225356 | DYSKERATOSIS CONGENITA, AUTOSOMAL RECESSIVE 6 | 3 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
Hgene | PARN | C0265965 | Dyskeratosis Congenita | 2 | GENOMICS_ENGLAND;ORPHANET |
Hgene | PARN | C0085786 | Hamman-Rich syndrome | 1 | ORPHANET |
Hgene | PARN | C1800706 | Idiopathic Pulmonary Fibrosis | 1 | CTD_human;ORPHANET |
Hgene | PARN | C1846142 | HOYERAAL-HREIDARSSON SYNDROME | 1 | ORPHANET |
Hgene | PARN | C4721508 | Hamman-Rich Disease | 1 | CTD_human |
Hgene | PARN | C4721509 | Usual Interstitial Pneumonia | 1 | CTD_human |
Hgene | PARN | C4721952 | Familial Idiopathic Pulmonary Fibrosis | 1 | CTD_human |