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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:PCTP-STXBP4 (FusionGDB2 ID:63141) |
Fusion Gene Summary for PCTP-STXBP4 |
Fusion gene summary |
Fusion gene information | Fusion gene name: PCTP-STXBP4 | Fusion gene ID: 63141 | Hgene | Tgene | Gene symbol | PCTP | STXBP4 | Gene ID | 58488 | 252983 |
Gene name | phosphatidylcholine transfer protein | syntaxin binding protein 4 | |
Synonyms | PC-TP|STARD2 | Synip | |
Cytomap | 17q22 | 17q22 | |
Type of gene | protein-coding | protein-coding | |
Description | phosphatidylcholine transfer proteinSTART domain-containing protein 2StAR-related lipid transfer (START) domain containing 2stAR-related lipid transfer protein 2 | syntaxin-binding protein 4STX4-interacting proteinsyntaxin 4 interacting protein | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000573500, ENST00000576221, ENST00000268896, ENST00000576183, ENST00000325214, | ENST00000299341, ENST00000376352, ENST00000405898, ENST00000434978, ENST00000398391, | |
Fusion gene scores | * DoF score | 6 X 3 X 5=90 | 15 X 12 X 9=1620 |
# samples | 7 | 16 | |
** MAII score | log2(7/90*10)=-0.362570079384708 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(16/1620*10)=-3.33985000288463 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: PCTP [Title/Abstract] AND STXBP4 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | PCTP(53828605)-STXBP4(53108528), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | PCTP | GO:0015914 | phospholipid transport | 12055623 |
Tgene | STXBP4 | GO:0006974 | cellular response to DNA damage stimulus | 19451233 |
Tgene | STXBP4 | GO:0061178 | regulation of insulin secretion involved in cellular response to glucose stimulus | 12855681 |
Fusion gene breakpoints across PCTP (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across STXBP4 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | Non-Cancer | TCGA-AH-6643-11A | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + |
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Fusion Gene ORF analysis for PCTP-STXBP4 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000573500 | ENST00000299341 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + |
In-frame | ENST00000573500 | ENST00000376352 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + |
In-frame | ENST00000573500 | ENST00000405898 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + |
In-frame | ENST00000573500 | ENST00000434978 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + |
In-frame | ENST00000573500 | ENST00000398391 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + |
intron-3CDS | ENST00000576221 | ENST00000299341 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + |
intron-3CDS | ENST00000576221 | ENST00000376352 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + |
intron-3CDS | ENST00000576221 | ENST00000405898 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + |
intron-3CDS | ENST00000576221 | ENST00000434978 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + |
intron-3CDS | ENST00000576221 | ENST00000398391 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + |
In-frame | ENST00000268896 | ENST00000299341 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + |
In-frame | ENST00000268896 | ENST00000376352 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + |
In-frame | ENST00000268896 | ENST00000405898 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + |
In-frame | ENST00000268896 | ENST00000434978 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + |
In-frame | ENST00000268896 | ENST00000398391 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + |
In-frame | ENST00000576183 | ENST00000299341 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + |
In-frame | ENST00000576183 | ENST00000376352 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + |
In-frame | ENST00000576183 | ENST00000405898 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + |
In-frame | ENST00000576183 | ENST00000434978 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + |
In-frame | ENST00000576183 | ENST00000398391 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + |
intron-3CDS | ENST00000325214 | ENST00000299341 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + |
intron-3CDS | ENST00000325214 | ENST00000376352 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + |
intron-3CDS | ENST00000325214 | ENST00000405898 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + |
intron-3CDS | ENST00000325214 | ENST00000434978 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + |
intron-3CDS | ENST00000325214 | ENST00000398391 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000573500 | PCTP | chr17 | 53828605 | + | ENST00000299341 | STXBP4 | chr17 | 53108528 | + | 448 | 151 | 10 | 447 | 146 |
ENST00000573500 | PCTP | chr17 | 53828605 | + | ENST00000376352 | STXBP4 | chr17 | 53108528 | + | 5521 | 151 | 10 | 1146 | 378 |
ENST00000573500 | PCTP | chr17 | 53828605 | + | ENST00000405898 | STXBP4 | chr17 | 53108528 | + | 1595 | 151 | 10 | 447 | 145 |
ENST00000573500 | PCTP | chr17 | 53828605 | + | ENST00000434978 | STXBP4 | chr17 | 53108528 | + | 2096 | 151 | 10 | 1080 | 356 |
ENST00000573500 | PCTP | chr17 | 53828605 | + | ENST00000398391 | STXBP4 | chr17 | 53108528 | + | 1595 | 151 | 10 | 447 | 145 |
ENST00000268896 | PCTP | chr17 | 53828605 | + | ENST00000299341 | STXBP4 | chr17 | 53108528 | + | 563 | 266 | 89 | 562 | 158 |
ENST00000268896 | PCTP | chr17 | 53828605 | + | ENST00000376352 | STXBP4 | chr17 | 53108528 | + | 5636 | 266 | 89 | 1261 | 390 |
ENST00000268896 | PCTP | chr17 | 53828605 | + | ENST00000405898 | STXBP4 | chr17 | 53108528 | + | 1710 | 266 | 89 | 562 | 157 |
ENST00000268896 | PCTP | chr17 | 53828605 | + | ENST00000434978 | STXBP4 | chr17 | 53108528 | + | 2211 | 266 | 89 | 1195 | 368 |
ENST00000268896 | PCTP | chr17 | 53828605 | + | ENST00000398391 | STXBP4 | chr17 | 53108528 | + | 1710 | 266 | 89 | 562 | 157 |
ENST00000576183 | PCTP | chr17 | 53828605 | + | ENST00000299341 | STXBP4 | chr17 | 53108528 | + | 481 | 184 | 7 | 480 | 158 |
ENST00000576183 | PCTP | chr17 | 53828605 | + | ENST00000376352 | STXBP4 | chr17 | 53108528 | + | 5554 | 184 | 7 | 1179 | 390 |
ENST00000576183 | PCTP | chr17 | 53828605 | + | ENST00000405898 | STXBP4 | chr17 | 53108528 | + | 1628 | 184 | 7 | 480 | 157 |
ENST00000576183 | PCTP | chr17 | 53828605 | + | ENST00000434978 | STXBP4 | chr17 | 53108528 | + | 2129 | 184 | 7 | 1113 | 368 |
ENST00000576183 | PCTP | chr17 | 53828605 | + | ENST00000398391 | STXBP4 | chr17 | 53108528 | + | 1628 | 184 | 7 | 480 | 157 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000573500 | ENST00000299341 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + | 0.004057034 | 0.9959429 |
ENST00000573500 | ENST00000376352 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + | 0.000196891 | 0.9998031 |
ENST00000573500 | ENST00000405898 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + | 0.003085934 | 0.996914 |
ENST00000573500 | ENST00000434978 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + | 0.000760828 | 0.9992392 |
ENST00000573500 | ENST00000398391 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + | 0.003085934 | 0.996914 |
ENST00000268896 | ENST00000299341 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + | 0.003136978 | 0.996863 |
ENST00000268896 | ENST00000376352 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + | 0.000198157 | 0.9998018 |
ENST00000268896 | ENST00000405898 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + | 0.002605327 | 0.9973947 |
ENST00000268896 | ENST00000434978 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + | 0.000777033 | 0.999223 |
ENST00000268896 | ENST00000398391 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + | 0.002605327 | 0.9973947 |
ENST00000576183 | ENST00000299341 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + | 0.003670871 | 0.9963291 |
ENST00000576183 | ENST00000376352 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + | 0.000199143 | 0.99980086 |
ENST00000576183 | ENST00000405898 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + | 0.003493682 | 0.9965063 |
ENST00000576183 | ENST00000434978 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + | 0.000778557 | 0.99922144 |
ENST00000576183 | ENST00000398391 | PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + | 0.003493682 | 0.9965063 |
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Fusion Genomic Features for PCTP-STXBP4 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + | 0.000778575 | 0.99922144 |
PCTP | chr17 | 53828605 | + | STXBP4 | chr17 | 53108528 | + | 0.000778575 | 0.99922144 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for PCTP-STXBP4 |
Go to FGviewer for the breakpoints of chr17:53828605-chr17:53108528 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | STXBP4 | chr17:53828605 | chr17:53108528 | ENST00000299341 | 7 | 12 | 291_417 | 147.0 | 246.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | STXBP4 | chr17:53828605 | chr17:53108528 | ENST00000376352 | 7 | 18 | 291_417 | 222.0 | 554.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | STXBP4 | chr17:53828605 | chr17:53108528 | ENST00000398391 | 6 | 11 | 291_417 | 147.0 | 246.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | STXBP4 | chr17:53828605 | chr17:53108528 | ENST00000299341 | 7 | 12 | 496_529 | 147.0 | 246.0 | Domain | WW | |
Tgene | STXBP4 | chr17:53828605 | chr17:53108528 | ENST00000376352 | 7 | 18 | 496_529 | 222.0 | 554.0 | Domain | WW | |
Tgene | STXBP4 | chr17:53828605 | chr17:53108528 | ENST00000398391 | 6 | 11 | 496_529 | 147.0 | 246.0 | Domain | WW |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | PCTP | chr17:53828605 | chr17:53108528 | ENST00000268896 | + | 1 | 6 | 1_212 | 47.0 | 215.0 | Domain | START |
Hgene | PCTP | chr17:53828605 | chr17:53108528 | ENST00000325214 | + | 1 | 6 | 1_212 | 0 | 143.0 | Domain | START |
Tgene | STXBP4 | chr17:53828605 | chr17:53108528 | ENST00000299341 | 7 | 12 | 19_105 | 147.0 | 246.0 | Domain | PDZ | |
Tgene | STXBP4 | chr17:53828605 | chr17:53108528 | ENST00000376352 | 7 | 18 | 19_105 | 222.0 | 554.0 | Domain | PDZ | |
Tgene | STXBP4 | chr17:53828605 | chr17:53108528 | ENST00000398391 | 6 | 11 | 19_105 | 147.0 | 246.0 | Domain | PDZ |
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Fusion Gene Sequence for PCTP-STXBP4 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000573500_ENST00000299341_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(transcript)=448nt_BP=151nt CTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGG GGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGGCTCTAAATTATCTTGGTATTCAGCCCAC AAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAA CTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCTTGTGATTCTTC >In-frame_ENST00000573500_ENST00000299341_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(amino acids)=146AA_start in transcript=10_stop in transcript=447 MELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKALNYLGIQPTKEQHQALRQQVQADSKGTVSFGDFVQVARNLFC -------------------------------------------------------------- >In-frame_ENST00000573500_ENST00000376352_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(transcript)=5521nt_BP=151nt CTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGG GGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGGCTCTAAATTATCTTGGTATTCAGCCCAC AAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAA CTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCTTGTGATTCTTC AGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGGAAAAATTATTGGAATCAGA TAAGCAAAGGAAACAATTGACAGAAGAGCTCCAGAATGTGAAACAAGAAGCCAAAGCTGTAGTTGAAGAAACAAGAGCCCTGCGTAGTCG GATTCATCTTGCTGAAGCTGCTCAGAGACAGGCACATGGAATGGAAATGGACTATGAAGAAGTGATCCGTCTGTTAGAGGCCAAGATTAC AGAGCTAAAGGCTCAGCTTGCTGATTATTCTGACCAAAATAAAGAAAGTGTTCAGGATTTAAAAAAGAGAATCATGGTACTCGACTGCCA ATTACGAAAATCAGAAATGGCTCGAAAAACTTTTGAGGCATCCACTGAAAAGCTTCTTCATTTTGTAGAGGCTATTCAAGAAGTATTTTC TGATAATTCTACTCCTTTATCAAATTTAAGTGAAAGAAGAGCTGTGTTAGCTTCTCAGACTTCCCTCACACCACTGGGAAGGAATGGACG TAGCATCCCAGCAACGCTGGCGCTTGAATCTAAGGAACTTGTTAAATCTGTTCGTGCCTTACTTGATATGGATTGTTTACCTTATGGGTG GGAGGAAGCTTACACAGCAGATGGAATCAAGTACTTCATCAATCATGTAACACAGACTACATCCTGGATCCATCCCGTGATGAGTGTCCT GAATCTATCTCGCTCAGAGGAGAATGAAGAGGATTGCTCTAGAGAACTCCCCAACCAGAAAAGTTGATGGTTTTCCTTAGGAAGTGGAGC TACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACAGTCTAAAATAGGAGTAAAGCATGCACTACTTGTTGAAG TGTGAAATGGAGACTCTGGACTTTGGGTATTTTTGTAAAACTTTTGATATTTCTGTATACATTTAAAAAATCAATTGCCACTACAGTAGT TCCTTAAGAATAATCTAGTTATATTTTTTGAAATCACATATAATTAGACTTTATAATATATATACTTTTTCATATATAATTAGATCTTTC TTTGTAATTTCATATGTAGTTCTTCATAGGGTCTCAGATACAATGGTTTTTATAATTGACATATTGAAAAAGTATATGAACATAATGAAA CACCTCATTTATTTGATAATTCACTAATGTTTTATATTCATATATTAGGAAAGTGAACTTAGCAAGCTTTTTGGAATTTAAGGATCACAT TTAGACATCTCATGGGCTGATGAATACAGCTGGTATCTTTGTGGAGCTTTCTAATTTACAAAATGCTTTGTAGACCCCATTGTCTTTAAA CCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTC TGTCCCAGCACCGAGACTCACTCCTAAGTCTTCTGATTCCATGAGCAGTCCCCCTTCCCCCATACCCTGCTGTCTCCACGGAGGGAGGTC ACAGCCCATCACGCAGGACACTGTGATTGTGTTGATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTTCGG TCAAACATGGCCCCTCTATAACCCCACTATTCTTCTCCTATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACT CTTTGTGATATTGTTTCAGCAGACTTCTTTCAGCAGCTCGTGTTTTTCTAAAGTGAAAGGCATGGTTTGTCCTGCTTAGGTTGCCCTTCC CAGAGGGATGGTTTGAGGGGAGCTGATGAGAAGAGAGGTATCTGTTAAAACATTACTGCTCTACTCGAAACAAGATGGAAGCCTAAAGCC CAAGTCGAGCAGCTCCCAGCACTGCTGTGCAGACCTAGAGGTCCTTAGAACATAGTCTAAGAACCATTCATTGTAGCCATTTTATAGTTG AGTAAACTGAGATCTTAAGTCTCCTAGTCTACTGAATTTCATATGGTGTATAATACAGATTTATATGGTAAAGATATACATATACATTGT GCTCAACTATACATTCCTGAATCCATTTAGGATTTGTGATTTATGTCTTGAGTAATAATATAAAGTCAACTCCAGACTGATAGGTAGTCA TTAGCCATGAGAAATGTTTCAGGATGGCTAGGGAAGACTTGTGTTTTGCCTGACAGCCATTTGAATGTTAGGAAGCTTCGGGGAGACAAG TTTTGAGAGAAGCCCCAGAGGGAGCTATTTCCTTGCACCCCCCAGAGGTGAATGAGGTATTCTATAAGTTAGTGTCTATAATTGTGAAAG TACAAACTTCTTGTTTTTGTCAAATTAATGGTATGAAATTTCTCTCCCCCTGCTTGAAGAGTTTTCTAATTCGTTTCTAGTGAGCAAAAC AAAGAAGGTGCTTGAGTCACTGAAATCAAAGTACTCAGGCACACAGCCCACTGACAAGAGACACCTCATCCATTAACTGCTGTTTTGTAC CACTTGCCGCCCTGTTTCTGTCAAATACCTAGTGAAAAAGGCCTAAACAATTGTAATGATATTATTTATTGGGCATTTTGTGCCATACAT GGTGATGAGCAGTTTGCATATATTTATTTATGATCTTCTTAAAACCATTCCATGAAATAGGAACTGTAATTATCCCCAATTCTAAAAGAA AAAACTTAGTTTTAGAGAGTTAGTAATCTTTGCCTAAGGGTCACAAAGCACCTATGTGTAGAAGCTAGGGTTCAAGGCAGATCTGTGATT CCAGAAGCTGTTCTCTAAACCACTATGGAGAACTGCTTAGATTCATTGTCTATGGGTACATTTTATAAAAAGGCAGATTCTAGTTCAGTG TCATAAGGAACTTTCTAGTAATTAGAGCTGATAAGAAAAGAATTCCCCAGGAGAAAATGGAAACACTATCCCAGCAATCTGAATTCCTTA CTTGGGGAATGTTGCTGAGGAGGTTCAGTGTGTGAATGGACTGAACCAGTTGGCCACTCTCTCAGATTCCCTCTTCATAAAGCTTCCGTG ACTTCTAAACCATCAGGTCGGTGCCATAAGAGATGCTCAAAAAAGCATGGTCAGGGCTTAGCAAGAATCCTTTTCCAGTGCAAATACGAC CCTCATATTATGTTTTGGCGAGTAGCCAGTCTTTCTTTAACATCAATCAACCGTAGCAATGTGGTCATCACGAAGTCTTCATTGACTCAC TGGCTTGGATTTTAGGGTTAGAAAATCTGAATGTTCTTATGTCCTTCCGTCTCACTTTACTAGAGTGCCCAAGTTGACTCATCCTTACTC ACTCATTCCCTCAAAATATTTATTGAGCACCAACAATGTCACAAGCACTGTGCTAAACACTGTGGTGAAGTAGAACAATTGCTAATCATT TCCTGGGTTCCACTTACTCTTGATTTAAAAAAAAAAAAACAACAAAAGAGTTTGTGTGTGGCCAGGACTAAACAGCTGCTTCTTAATTTT TGAATTTTAAAACTAATCTATTTTATTTAAAAAAAATCAAGTACTTTGGAAGTGAATAAAGTAAGAGATAGCCTGTCTCACTTTCCAGAG GTAGCAGTCACTAATACTGTGGTGAGTGATTTTACTCAAAGGAAATCACACTATTAAGCAGCTTGGTTTTGACATGTTATGTTGTGGTCA TCTTTTCATGTCAATACATAGATTAATCTTTTATTTCAAATGTCTACATAAAATATCACTACCCACATAACCTATAATTTGTGTGGCCAG CAATTTATTGAACACTAAAATGTTTTAAGTTTTCTTATTGCTAACAATGTCACAGTGAACATTTATATATTCATTAAATCCTTTTCCTCA TGTATCTTTGCACTCTTGTGCTAGTATGTCTATAGTGTGAATACATTCATAAATTTCTTGATCAAAGCTAGGTCAAAGTTACATTCATTT TAATTTTGGTACATATCCATAAATTCTCCATAAAAGTAGGACCAACTTACATTACCACCAATAGTGTATGTGAGCCTTATTTTTATGTAT GATAGGACTTTTTTTAGTCCAAATGTTCCTATAGATTTTCTGGGTTTTTTTTTTTTTTTTGTCCTTGGAAGAATAACCTTCCTTCCACCA AGTCCAAGAACCTGAGATTTTTAATCATTAGGTTTTAGATTTCCTTTAGCAGCAGAGACTGACTTGCTGTATAGAGGGAAGTCAAGTAGT GACTAACTCACTATATGTCAAACACATCATTACTCTTCTCTTTTCCTACTTTACATGTAATGGTTGCGAGGACCAACTTTCAAATGAGCT AACTTGGGTGAGACGTTCACTAAAGTACCAAGCACAATACAAATGCATCTTCGAGTTCTTTGGGCCTCACTTTCCCTATCTGAATAATAA GGATAGTAATCCCTTGCCTTTTCTCAAACCAGTTCAACTCAGCAAACACTTCCTGAGCACCTGCTACATGCCAGGCAAAATGTGAAATTT GCATGCTATGAGGCTAAATGGTACTGATTCTCAAAACAAGGAGCTCATAGTCTAAAACCATTTTTCTTTCTTTTTTTTCCCCCTAAACAA CCTCTTAAAGGGGTAAGAAGTTAGGGGGTTGTTTATTAAGAACCCCTGAAGAGCAACCCTTTACCACTCTCTTAAATTTGAAAAATTCCA AAATAATATTAACACCTCTTGACTAGAAAAGGAAAAAAAAGGAACATGCCGTATGAAGAGCCTCTCCAATAATAAATGCAAAGCAGCTGT CAAAATATAGAGTCAAGTGATACTTTCATAAAGTGTTTGCACAATTAGAAAATGTTATCCTTTTTCTCGGGAGAAATGGGACATTTTTAT TTTCTCTGCTAAGTGAAATGCAACTTTTTGAAGAATCAACACGCTTGACATTTTTACAATGTACATAAAGAACTGAACTATTATTAAAAC AACTTACACACTCCATTGCTTATAACTTTTGAGAGAATGAAAAGAACCTTAAACAGAATGTGCCTGTGGAGCTTCGCTTTAGAAATGAAA TACCCAAGGTGTTTTAACTACAACTGTCTACATGTAATAGTGTGTCTGCATAATGACTTTGTAAATATTAACTGCAATTCTGTATTTGCT >In-frame_ENST00000573500_ENST00000376352_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(amino acids)=378AA_start in transcript=10_stop in transcript=1146 MELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKALNYLGIQPTKEQHQALRQQVQADSKGTVSFGDFVQVARNLFC LQLDEVNVGAHEISNILDSQLLPCDSSEADEMERLKCERDDALKEVNTLKEKLLESDKQRKQLTEELQNVKQEAKAVVEETRALRSRIHL AEAAQRQAHGMEMDYEEVIRLLEAKITELKAQLADYSDQNKESVQDLKKRIMVLDCQLRKSEMARKTFEASTEKLLHFVEAIQEVFSDNS TPLSNLSERRAVLASQTSLTPLGRNGRSIPATLALESKELVKSVRALLDMDCLPYGWEEAYTADGIKYFINHVTQTTSWIHPVMSVLNLS -------------------------------------------------------------- >In-frame_ENST00000573500_ENST00000405898_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(transcript)=1595nt_BP=151nt CTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGG GGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGGCTCTAAATTATCTTGGTATTCAGCCCAC AAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAA CTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCTTGTGATTCTTC AGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGTGGCCAGGGCAGAATTAGAT GAAGAGCCAATAAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTTTTTCATGTGCAGGGCTATTCTTAAG GGACATCATGTTTTGCTAACGTAATTTGGAATTAATATTATTTTAGAGAGGAAAAAAACACACATATCCCAAATATACTGTAACATTTTT CTTCTCTTTTTTTGTTTGTTTGGTTTTTTGATTCTTGTTTTTGTTTTGTGTTTTTGAGACAGGGTCGCACTCTGTCGCCCAGGCTGGAGT GCAATACTGCAATCACGTCTCACTGCAGCCTCAACCTCCTGGGTTCAAGTGATTCTCCCACCTCAACCTCCCAAGTAACTGGGACAACAT GTCCATGCCACCATGCTCAACTAATTTTTTTTTAAATTTTTATTTTGTAGAGATGGTGTCTCACTATTTTGTTCAGACTGGTCTCAAACA CCTGGGCTCAAATGACCCACCTACCTCAGCCTCTCAAAGTGCTGGGATTACAGGTGTGAGCCACCATGTCTGGCCTTGATTCTCTTTATG TGGTTTCATTCTGTTTTTAGAAGAATATTACATTTAAATTATATCCTAATTTTTATAGAAAGCTATATTTTCCAAATCTTTAGGAAAAGC AACATAACTACTTGATTTACCACTAATTCGTCATAGGCACATATTTTTAAAATTATTTTATTAAATAAGGTATAGTATATTGATAATTAT TTAATTTTTATTAAATAGAAAATATTTACACCAAAAGGAAAGAAAATTTGTTTTGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGA AGCCATTGTTGCAAATATATTATTTATCTTTTCATAGATTTTTCTCTACACAGAAAATTATATTTTTTAAAAATAGGCAGGGCATGATGG CTGACACCTTTAATCGCAGTACTTTGGGAGGCTGAGGCAAGAGGATTACTTGAGCTCAGGAGTTTAACATCAGCCTGGGCAACATAGCAG GACCCCATCTCTACTATTTAAAACATAAAAACAAAAATAAATAAATATATGTATATGTGGGGACAGGGAGTATGTGAGAAATTTCTGTAC >In-frame_ENST00000573500_ENST00000405898_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(amino acids)=145AA_start in transcript=10_stop in transcript=447 MELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKALNYLGIQPTKEQHQALRQQVQADSKGTVSFGDFVQVARNLFC -------------------------------------------------------------- >In-frame_ENST00000573500_ENST00000434978_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(transcript)=2096nt_BP=151nt CTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGG GGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGGCTCTAAATTATCTTGGTATTCAGCCCAC AAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAA CTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCTTGTGATTCTTC AGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGGAAGCCAAAGCTGTAGTTGA AGAAACAAGAGCCCTGCGTAGTCGGATTCATCTTGCTGAAGCTGCTCAGAGACAGGCACATGGAATGGAAATGGACTATGAAGAAGTGAT CCGTCTGTTAGAGGCCAAGATTACAGAGCTAAAGGCTCAGCTTGCTGATTATTCTGACCAAAATAAAGAAAGTGTTCAGGATTTAAAAAA GAGAATCATGGTACTCGACTGCCAATTACGAAAATCAGAAATGGCTCGAAAAACTTTTGAGGCATCCACTGAAAAGCTTCTTCATTTTGT AGAGGCTATTCAAGAAGTATTTTCTGATAATTCTACTCCTTTATCAAATTTAAGTGAAAGAAGAGCTGTGTTAGCTTCTCAGACTTCCCT CACACCACTGGGAAGGAATGGACGTAGCATCCCAGCAACGCTGGCGCTTGAATCTAAGGAACTTGTTAAATCTGTTCGTGCCTTACTTGA TATGGATTGTTTACCTTATGGGTGGGAGGAAGCTTACACAGCAGATGGAATCAAGTACTTCATCAATCATGTAACACAGACTACATCCTG GATCCATCCCGTGATGAGTGTCCTGAATCTATCTCGCTCAGAGGAGAATGAAGAGGATTGCTCTAGAGAACTCCCCAACCAGAAAAGTTG ATGGTTTTCCTTAGGAAGTGGAGCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACAGTCTAAAATAGGAG TAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGTATTTTTGTAAAACTTTTGATATTTCTGTATACATTTAA AAAATCAATTGCCACTACAGTAGTTCCTTAAGAATAATCTAGTTATATTTTTTGAAATCACATATAATTAGACTTTATAATATATATACT TTTTCATATATAATTAGATCTTTCTTTGTAATTTCATATGTAGTTCTTCATAGGGTCTCAGATACAATGGTTTTTATAATTGACATATTG AAAAAGTATATGAACATAATGAAACACCTCATTTATTTGATAATTCACTAATGTTTTATATTCATATATTAGGAAAGTGAACTTAGCAAG CTTTTTGGAATTTAAGGATCACATTTAGACATCTCATGGGCTGATGAATACAGCTGGTATCTTTGTGGAGCTTTCTAATTTACAAAATGC TTTGTAGACCCCATTGTCTTTAAACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAGTAGGGAAATA GCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAGACTCACTCCTAAGTCTTCTGATTCCATGAGCAGTCCCCCTTCCCCCATACC CTGCTGTCTCCACGGAGGGAGGTCACAGCCCATCACGCAGGACACTGTGATTGTGTTGATGCAGCTGGCTCCACAGCTGTGCATTCCACA GAGATTCAGAAGGCACCTCTTCGGTCAAACATGGCCCCTCTATAACCCCACTATTCTTCTCCTATAAACCCTTCCCCCTTCTCTGCACCC AAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTTCTTTCAGCAGCTCGTGTTTTTCTAAAGTGAAAGGCATGGT >In-frame_ENST00000573500_ENST00000434978_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(amino acids)=356AA_start in transcript=10_stop in transcript=1080 MELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKALNYLGIQPTKEQHQALRQQVQADSKGTVSFGDFVQVARNLFC LQLDEVNVGAHEISNILDSQLLPCDSSEADEMERLKCERDDALKEVNTLKEAKAVVEETRALRSRIHLAEAAQRQAHGMEMDYEEVIRLL EAKITELKAQLADYSDQNKESVQDLKKRIMVLDCQLRKSEMARKTFEASTEKLLHFVEAIQEVFSDNSTPLSNLSERRAVLASQTSLTPL -------------------------------------------------------------- >In-frame_ENST00000573500_ENST00000398391_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(transcript)=1595nt_BP=151nt CTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGG GGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGGCTCTAAATTATCTTGGTATTCAGCCCAC AAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAA CTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCTTGTGATTCTTC AGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGTGGCCAGGGCAGAATTAGAT GAAGAGCCAATAAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTTTTTCATGTGCAGGGCTATTCTTAAG GGACATCATGTTTTGCTAACGTAATTTGGAATTAATATTATTTTAGAGAGGAAAAAAACACACATATCCCAAATATACTGTAACATTTTT CTTCTCTTTTTTTGTTTGTTTGGTTTTTTGATTCTTGTTTTTGTTTTGTGTTTTTGAGACAGGGTCGCACTCTGTCGCCCAGGCTGGAGT GCAATACTGCAATCACGTCTCACTGCAGCCTCAACCTCCTGGGTTCAAGTGATTCTCCCACCTCAACCTCCCAAGTAACTGGGACAACAT GTCCATGCCACCATGCTCAACTAATTTTTTTTTAAATTTTTATTTTGTAGAGATGGTGTCTCACTATTTTGTTCAGACTGGTCTCAAACA CCTGGGCTCAAATGACCCACCTACCTCAGCCTCTCAAAGTGCTGGGATTACAGGTGTGAGCCACCATGTCTGGCCTTGATTCTCTTTATG TGGTTTCATTCTGTTTTTAGAAGAATATTACATTTAAATTATATCCTAATTTTTATAGAAAGCTATATTTTCCAAATCTTTAGGAAAAGC AACATAACTACTTGATTTACCACTAATTCGTCATAGGCACATATTTTTAAAATTATTTTATTAAATAAGGTATAGTATATTGATAATTAT TTAATTTTTATTAAATAGAAAATATTTACACCAAAAGGAAAGAAAATTTGTTTTGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGA AGCCATTGTTGCAAATATATTATTTATCTTTTCATAGATTTTTCTCTACACAGAAAATTATATTTTTTAAAAATAGGCAGGGCATGATGG CTGACACCTTTAATCGCAGTACTTTGGGAGGCTGAGGCAAGAGGATTACTTGAGCTCAGGAGTTTAACATCAGCCTGGGCAACATAGCAG GACCCCATCTCTACTATTTAAAACATAAAAACAAAAATAAATAAATATATGTATATGTGGGGACAGGGAGTATGTGAGAAATTTCTGTAC >In-frame_ENST00000573500_ENST00000398391_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(amino acids)=145AA_start in transcript=10_stop in transcript=447 MELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKALNYLGIQPTKEQHQALRQQVQADSKGTVSFGDFVQVARNLFC -------------------------------------------------------------- >In-frame_ENST00000268896_ENST00000299341_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(transcript)=563nt_BP=266nt AGTTTCCTGCCAATGACGCTGGGGCAGCCGGGGCAGCCGGGGCAGCCCGGTCACCCCGCCCCCAGGCCCACACTAAGGGTGTCCGCGGCC TGCCCTCCAGGCGGAGGAGCCCGGACTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCG AGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGGCTC TAAATTATCTTGGTATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTG GAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATT CACAGCTTCTTCCTTGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACAC >In-frame_ENST00000268896_ENST00000299341_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(amino acids)=158AA_start in transcript=89_stop in transcript=562 MPSRRRSPDCGRMELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKALNYLGIQPTKEQHQALRQQVQADSKGTVSF -------------------------------------------------------------- >In-frame_ENST00000268896_ENST00000376352_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(transcript)=5636nt_BP=266nt AGTTTCCTGCCAATGACGCTGGGGCAGCCGGGGCAGCCGGGGCAGCCCGGTCACCCCGCCCCCAGGCCCACACTAAGGGTGTCCGCGGCC TGCCCTCCAGGCGGAGGAGCCCGGACTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCG AGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGGCTC TAAATTATCTTGGTATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTG GAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATT CACAGCTTCTTCCTTGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACAC TTAAGGAAAAATTATTGGAATCAGATAAGCAAAGGAAACAATTGACAGAAGAGCTCCAGAATGTGAAACAAGAAGCCAAAGCTGTAGTTG AAGAAACAAGAGCCCTGCGTAGTCGGATTCATCTTGCTGAAGCTGCTCAGAGACAGGCACATGGAATGGAAATGGACTATGAAGAAGTGA TCCGTCTGTTAGAGGCCAAGATTACAGAGCTAAAGGCTCAGCTTGCTGATTATTCTGACCAAAATAAAGAAAGTGTTCAGGATTTAAAAA AGAGAATCATGGTACTCGACTGCCAATTACGAAAATCAGAAATGGCTCGAAAAACTTTTGAGGCATCCACTGAAAAGCTTCTTCATTTTG TAGAGGCTATTCAAGAAGTATTTTCTGATAATTCTACTCCTTTATCAAATTTAAGTGAAAGAAGAGCTGTGTTAGCTTCTCAGACTTCCC TCACACCACTGGGAAGGAATGGACGTAGCATCCCAGCAACGCTGGCGCTTGAATCTAAGGAACTTGTTAAATCTGTTCGTGCCTTACTTG ATATGGATTGTTTACCTTATGGGTGGGAGGAAGCTTACACAGCAGATGGAATCAAGTACTTCATCAATCATGTAACACAGACTACATCCT GGATCCATCCCGTGATGAGTGTCCTGAATCTATCTCGCTCAGAGGAGAATGAAGAGGATTGCTCTAGAGAACTCCCCAACCAGAAAAGTT GATGGTTTTCCTTAGGAAGTGGAGCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACAGTCTAAAATAGGA GTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGTATTTTTGTAAAACTTTTGATATTTCTGTATACATTTA AAAAATCAATTGCCACTACAGTAGTTCCTTAAGAATAATCTAGTTATATTTTTTGAAATCACATATAATTAGACTTTATAATATATATAC TTTTTCATATATAATTAGATCTTTCTTTGTAATTTCATATGTAGTTCTTCATAGGGTCTCAGATACAATGGTTTTTATAATTGACATATT GAAAAAGTATATGAACATAATGAAACACCTCATTTATTTGATAATTCACTAATGTTTTATATTCATATATTAGGAAAGTGAACTTAGCAA GCTTTTTGGAATTTAAGGATCACATTTAGACATCTCATGGGCTGATGAATACAGCTGGTATCTTTGTGGAGCTTTCTAATTTACAAAATG CTTTGTAGACCCCATTGTCTTTAAACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAGTAGGGAAAT AGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAGACTCACTCCTAAGTCTTCTGATTCCATGAGCAGTCCCCCTTCCCCCATAC CCTGCTGTCTCCACGGAGGGAGGTCACAGCCCATCACGCAGGACACTGTGATTGTGTTGATGCAGCTGGCTCCACAGCTGTGCATTCCAC AGAGATTCAGAAGGCACCTCTTCGGTCAAACATGGCCCCTCTATAACCCCACTATTCTTCTCCTATAAACCCTTCCCCCTTCTCTGCACC CAAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTTCTTTCAGCAGCTCGTGTTTTTCTAAAGTGAAAGGCATGG TTTGTCCTGCTTAGGTTGCCCTTCCCAGAGGGATGGTTTGAGGGGAGCTGATGAGAAGAGAGGTATCTGTTAAAACATTACTGCTCTACT CGAAACAAGATGGAAGCCTAAAGCCCAAGTCGAGCAGCTCCCAGCACTGCTGTGCAGACCTAGAGGTCCTTAGAACATAGTCTAAGAACC ATTCATTGTAGCCATTTTATAGTTGAGTAAACTGAGATCTTAAGTCTCCTAGTCTACTGAATTTCATATGGTGTATAATACAGATTTATA TGGTAAAGATATACATATACATTGTGCTCAACTATACATTCCTGAATCCATTTAGGATTTGTGATTTATGTCTTGAGTAATAATATAAAG TCAACTCCAGACTGATAGGTAGTCATTAGCCATGAGAAATGTTTCAGGATGGCTAGGGAAGACTTGTGTTTTGCCTGACAGCCATTTGAA TGTTAGGAAGCTTCGGGGAGACAAGTTTTGAGAGAAGCCCCAGAGGGAGCTATTTCCTTGCACCCCCCAGAGGTGAATGAGGTATTCTAT AAGTTAGTGTCTATAATTGTGAAAGTACAAACTTCTTGTTTTTGTCAAATTAATGGTATGAAATTTCTCTCCCCCTGCTTGAAGAGTTTT CTAATTCGTTTCTAGTGAGCAAAACAAAGAAGGTGCTTGAGTCACTGAAATCAAAGTACTCAGGCACACAGCCCACTGACAAGAGACACC TCATCCATTAACTGCTGTTTTGTACCACTTGCCGCCCTGTTTCTGTCAAATACCTAGTGAAAAAGGCCTAAACAATTGTAATGATATTAT TTATTGGGCATTTTGTGCCATACATGGTGATGAGCAGTTTGCATATATTTATTTATGATCTTCTTAAAACCATTCCATGAAATAGGAACT GTAATTATCCCCAATTCTAAAAGAAAAAACTTAGTTTTAGAGAGTTAGTAATCTTTGCCTAAGGGTCACAAAGCACCTATGTGTAGAAGC TAGGGTTCAAGGCAGATCTGTGATTCCAGAAGCTGTTCTCTAAACCACTATGGAGAACTGCTTAGATTCATTGTCTATGGGTACATTTTA TAAAAAGGCAGATTCTAGTTCAGTGTCATAAGGAACTTTCTAGTAATTAGAGCTGATAAGAAAAGAATTCCCCAGGAGAAAATGGAAACA CTATCCCAGCAATCTGAATTCCTTACTTGGGGAATGTTGCTGAGGAGGTTCAGTGTGTGAATGGACTGAACCAGTTGGCCACTCTCTCAG ATTCCCTCTTCATAAAGCTTCCGTGACTTCTAAACCATCAGGTCGGTGCCATAAGAGATGCTCAAAAAAGCATGGTCAGGGCTTAGCAAG AATCCTTTTCCAGTGCAAATACGACCCTCATATTATGTTTTGGCGAGTAGCCAGTCTTTCTTTAACATCAATCAACCGTAGCAATGTGGT CATCACGAAGTCTTCATTGACTCACTGGCTTGGATTTTAGGGTTAGAAAATCTGAATGTTCTTATGTCCTTCCGTCTCACTTTACTAGAG TGCCCAAGTTGACTCATCCTTACTCACTCATTCCCTCAAAATATTTATTGAGCACCAACAATGTCACAAGCACTGTGCTAAACACTGTGG TGAAGTAGAACAATTGCTAATCATTTCCTGGGTTCCACTTACTCTTGATTTAAAAAAAAAAAAACAACAAAAGAGTTTGTGTGTGGCCAG GACTAAACAGCTGCTTCTTAATTTTTGAATTTTAAAACTAATCTATTTTATTTAAAAAAAATCAAGTACTTTGGAAGTGAATAAAGTAAG AGATAGCCTGTCTCACTTTCCAGAGGTAGCAGTCACTAATACTGTGGTGAGTGATTTTACTCAAAGGAAATCACACTATTAAGCAGCTTG GTTTTGACATGTTATGTTGTGGTCATCTTTTCATGTCAATACATAGATTAATCTTTTATTTCAAATGTCTACATAAAATATCACTACCCA CATAACCTATAATTTGTGTGGCCAGCAATTTATTGAACACTAAAATGTTTTAAGTTTTCTTATTGCTAACAATGTCACAGTGAACATTTA TATATTCATTAAATCCTTTTCCTCATGTATCTTTGCACTCTTGTGCTAGTATGTCTATAGTGTGAATACATTCATAAATTTCTTGATCAA AGCTAGGTCAAAGTTACATTCATTTTAATTTTGGTACATATCCATAAATTCTCCATAAAAGTAGGACCAACTTACATTACCACCAATAGT GTATGTGAGCCTTATTTTTATGTATGATAGGACTTTTTTTAGTCCAAATGTTCCTATAGATTTTCTGGGTTTTTTTTTTTTTTTTGTCCT TGGAAGAATAACCTTCCTTCCACCAAGTCCAAGAACCTGAGATTTTTAATCATTAGGTTTTAGATTTCCTTTAGCAGCAGAGACTGACTT GCTGTATAGAGGGAAGTCAAGTAGTGACTAACTCACTATATGTCAAACACATCATTACTCTTCTCTTTTCCTACTTTACATGTAATGGTT GCGAGGACCAACTTTCAAATGAGCTAACTTGGGTGAGACGTTCACTAAAGTACCAAGCACAATACAAATGCATCTTCGAGTTCTTTGGGC CTCACTTTCCCTATCTGAATAATAAGGATAGTAATCCCTTGCCTTTTCTCAAACCAGTTCAACTCAGCAAACACTTCCTGAGCACCTGCT ACATGCCAGGCAAAATGTGAAATTTGCATGCTATGAGGCTAAATGGTACTGATTCTCAAAACAAGGAGCTCATAGTCTAAAACCATTTTT CTTTCTTTTTTTTCCCCCTAAACAACCTCTTAAAGGGGTAAGAAGTTAGGGGGTTGTTTATTAAGAACCCCTGAAGAGCAACCCTTTACC ACTCTCTTAAATTTGAAAAATTCCAAAATAATATTAACACCTCTTGACTAGAAAAGGAAAAAAAAGGAACATGCCGTATGAAGAGCCTCT CCAATAATAAATGCAAAGCAGCTGTCAAAATATAGAGTCAAGTGATACTTTCATAAAGTGTTTGCACAATTAGAAAATGTTATCCTTTTT CTCGGGAGAAATGGGACATTTTTATTTTCTCTGCTAAGTGAAATGCAACTTTTTGAAGAATCAACACGCTTGACATTTTTACAATGTACA TAAAGAACTGAACTATTATTAAAACAACTTACACACTCCATTGCTTATAACTTTTGAGAGAATGAAAAGAACCTTAAACAGAATGTGCCT GTGGAGCTTCGCTTTAGAAATGAAATACCCAAGGTGTTTTAACTACAACTGTCTACATGTAATAGTGTGTCTGCATAATGACTTTGTAAA >In-frame_ENST00000268896_ENST00000376352_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(amino acids)=390AA_start in transcript=89_stop in transcript=1261 MPSRRRSPDCGRMELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKALNYLGIQPTKEQHQALRQQVQADSKGTVSF GDFVQVARNLFCLQLDEVNVGAHEISNILDSQLLPCDSSEADEMERLKCERDDALKEVNTLKEKLLESDKQRKQLTEELQNVKQEAKAVV EETRALRSRIHLAEAAQRQAHGMEMDYEEVIRLLEAKITELKAQLADYSDQNKESVQDLKKRIMVLDCQLRKSEMARKTFEASTEKLLHF VEAIQEVFSDNSTPLSNLSERRAVLASQTSLTPLGRNGRSIPATLALESKELVKSVRALLDMDCLPYGWEEAYTADGIKYFINHVTQTTS -------------------------------------------------------------- >In-frame_ENST00000268896_ENST00000405898_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(transcript)=1710nt_BP=266nt AGTTTCCTGCCAATGACGCTGGGGCAGCCGGGGCAGCCGGGGCAGCCCGGTCACCCCGCCCCCAGGCCCACACTAAGGGTGTCCGCGGCC TGCCCTCCAGGCGGAGGAGCCCGGACTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCG AGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGGCTC TAAATTATCTTGGTATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTG GAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATT CACAGCTTCTTCCTTGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACAC TTAAGTGGCCAGGGCAGAATTAGATGAAGAGCCAATAAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT TTTCATGTGCAGGGCTATTCTTAAGGGACATCATGTTTTGCTAACGTAATTTGGAATTAATATTATTTTAGAGAGGAAAAAAACACACAT ATCCCAAATATACTGTAACATTTTTCTTCTCTTTTTTTGTTTGTTTGGTTTTTTGATTCTTGTTTTTGTTTTGTGTTTTTGAGACAGGGT CGCACTCTGTCGCCCAGGCTGGAGTGCAATACTGCAATCACGTCTCACTGCAGCCTCAACCTCCTGGGTTCAAGTGATTCTCCCACCTCA ACCTCCCAAGTAACTGGGACAACATGTCCATGCCACCATGCTCAACTAATTTTTTTTTAAATTTTTATTTTGTAGAGATGGTGTCTCACT ATTTTGTTCAGACTGGTCTCAAACACCTGGGCTCAAATGACCCACCTACCTCAGCCTCTCAAAGTGCTGGGATTACAGGTGTGAGCCACC ATGTCTGGCCTTGATTCTCTTTATGTGGTTTCATTCTGTTTTTAGAAGAATATTACATTTAAATTATATCCTAATTTTTATAGAAAGCTA TATTTTCCAAATCTTTAGGAAAAGCAACATAACTACTTGATTTACCACTAATTCGTCATAGGCACATATTTTTAAAATTATTTTATTAAA TAAGGTATAGTATATTGATAATTATTTAATTTTTATTAAATAGAAAATATTTACACCAAAAGGAAAGAAAATTTGTTTTGCTACCTTAGT TTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATATATTATTTATCTTTTCATAGATTTTTCTCTACACAGAAAATTATATTT TTTAAAAATAGGCAGGGCATGATGGCTGACACCTTTAATCGCAGTACTTTGGGAGGCTGAGGCAAGAGGATTACTTGAGCTCAGGAGTTT AACATCAGCCTGGGCAACATAGCAGGACCCCATCTCTACTATTTAAAACATAAAAACAAAAATAAATAAATATATGTATATGTGGGGACA GGGAGTATGTGAGAAATTTCTGTACTTTCCCTTCAATTTTGCTATGAATCCAAAACTGCTTCAAAAAATAATAAAGCCTTAAAAAATTTT >In-frame_ENST00000268896_ENST00000405898_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(amino acids)=157AA_start in transcript=89_stop in transcript=562 MPSRRRSPDCGRMELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKALNYLGIQPTKEQHQALRQQVQADSKGTVSF -------------------------------------------------------------- >In-frame_ENST00000268896_ENST00000434978_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(transcript)=2211nt_BP=266nt AGTTTCCTGCCAATGACGCTGGGGCAGCCGGGGCAGCCGGGGCAGCCCGGTCACCCCGCCCCCAGGCCCACACTAAGGGTGTCCGCGGCC TGCCCTCCAGGCGGAGGAGCCCGGACTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCG AGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGGCTC TAAATTATCTTGGTATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTG GAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATT CACAGCTTCTTCCTTGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACAC TTAAGGAAGCCAAAGCTGTAGTTGAAGAAACAAGAGCCCTGCGTAGTCGGATTCATCTTGCTGAAGCTGCTCAGAGACAGGCACATGGAA TGGAAATGGACTATGAAGAAGTGATCCGTCTGTTAGAGGCCAAGATTACAGAGCTAAAGGCTCAGCTTGCTGATTATTCTGACCAAAATA AAGAAAGTGTTCAGGATTTAAAAAAGAGAATCATGGTACTCGACTGCCAATTACGAAAATCAGAAATGGCTCGAAAAACTTTTGAGGCAT CCACTGAAAAGCTTCTTCATTTTGTAGAGGCTATTCAAGAAGTATTTTCTGATAATTCTACTCCTTTATCAAATTTAAGTGAAAGAAGAG CTGTGTTAGCTTCTCAGACTTCCCTCACACCACTGGGAAGGAATGGACGTAGCATCCCAGCAACGCTGGCGCTTGAATCTAAGGAACTTG TTAAATCTGTTCGTGCCTTACTTGATATGGATTGTTTACCTTATGGGTGGGAGGAAGCTTACACAGCAGATGGAATCAAGTACTTCATCA ATCATGTAACACAGACTACATCCTGGATCCATCCCGTGATGAGTGTCCTGAATCTATCTCGCTCAGAGGAGAATGAAGAGGATTGCTCTA GAGAACTCCCCAACCAGAAAAGTTGATGGTTTTCCTTAGGAAGTGGAGCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCT GAGATGAAACAGTCTAAAATAGGAGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGTATTTTTGTAAAAC TTTTGATATTTCTGTATACATTTAAAAAATCAATTGCCACTACAGTAGTTCCTTAAGAATAATCTAGTTATATTTTTTGAAATCACATAT AATTAGACTTTATAATATATATACTTTTTCATATATAATTAGATCTTTCTTTGTAATTTCATATGTAGTTCTTCATAGGGTCTCAGATAC AATGGTTTTTATAATTGACATATTGAAAAAGTATATGAACATAATGAAACACCTCATTTATTTGATAATTCACTAATGTTTTATATTCAT ATATTAGGAAAGTGAACTTAGCAAGCTTTTTGGAATTTAAGGATCACATTTAGACATCTCATGGGCTGATGAATACAGCTGGTATCTTTG TGGAGCTTTCTAATTTACAAAATGCTTTGTAGACCCCATTGTCTTTAAACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTT ATTCTTGGTTTTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAGACTCACTCCTAAGTCTTCTGATTCCA TGAGCAGTCCCCCTTCCCCCATACCCTGCTGTCTCCACGGAGGGAGGTCACAGCCCATCACGCAGGACACTGTGATTGTGTTGATGCAGC TGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTTCGGTCAAACATGGCCCCTCTATAACCCCACTATTCTTCTCCTAT AAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTTCTTTCAGCAGCTCGT >In-frame_ENST00000268896_ENST00000434978_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(amino acids)=368AA_start in transcript=89_stop in transcript=1195 MPSRRRSPDCGRMELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKALNYLGIQPTKEQHQALRQQVQADSKGTVSF GDFVQVARNLFCLQLDEVNVGAHEISNILDSQLLPCDSSEADEMERLKCERDDALKEVNTLKEAKAVVEETRALRSRIHLAEAAQRQAHG MEMDYEEVIRLLEAKITELKAQLADYSDQNKESVQDLKKRIMVLDCQLRKSEMARKTFEASTEKLLHFVEAIQEVFSDNSTPLSNLSERR AVLASQTSLTPLGRNGRSIPATLALESKELVKSVRALLDMDCLPYGWEEAYTADGIKYFINHVTQTTSWIHPVMSVLNLSRSEENEEDCS -------------------------------------------------------------- >In-frame_ENST00000268896_ENST00000398391_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(transcript)=1710nt_BP=266nt AGTTTCCTGCCAATGACGCTGGGGCAGCCGGGGCAGCCGGGGCAGCCCGGTCACCCCGCCCCCAGGCCCACACTAAGGGTGTCCGCGGCC TGCCCTCCAGGCGGAGGAGCCCGGACTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCG AGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGGCTC TAAATTATCTTGGTATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTG GAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATT CACAGCTTCTTCCTTGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACAC TTAAGTGGCCAGGGCAGAATTAGATGAAGAGCCAATAAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT TTTCATGTGCAGGGCTATTCTTAAGGGACATCATGTTTTGCTAACGTAATTTGGAATTAATATTATTTTAGAGAGGAAAAAAACACACAT ATCCCAAATATACTGTAACATTTTTCTTCTCTTTTTTTGTTTGTTTGGTTTTTTGATTCTTGTTTTTGTTTTGTGTTTTTGAGACAGGGT CGCACTCTGTCGCCCAGGCTGGAGTGCAATACTGCAATCACGTCTCACTGCAGCCTCAACCTCCTGGGTTCAAGTGATTCTCCCACCTCA ACCTCCCAAGTAACTGGGACAACATGTCCATGCCACCATGCTCAACTAATTTTTTTTTAAATTTTTATTTTGTAGAGATGGTGTCTCACT ATTTTGTTCAGACTGGTCTCAAACACCTGGGCTCAAATGACCCACCTACCTCAGCCTCTCAAAGTGCTGGGATTACAGGTGTGAGCCACC ATGTCTGGCCTTGATTCTCTTTATGTGGTTTCATTCTGTTTTTAGAAGAATATTACATTTAAATTATATCCTAATTTTTATAGAAAGCTA TATTTTCCAAATCTTTAGGAAAAGCAACATAACTACTTGATTTACCACTAATTCGTCATAGGCACATATTTTTAAAATTATTTTATTAAA TAAGGTATAGTATATTGATAATTATTTAATTTTTATTAAATAGAAAATATTTACACCAAAAGGAAAGAAAATTTGTTTTGCTACCTTAGT TTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATATATTATTTATCTTTTCATAGATTTTTCTCTACACAGAAAATTATATTT TTTAAAAATAGGCAGGGCATGATGGCTGACACCTTTAATCGCAGTACTTTGGGAGGCTGAGGCAAGAGGATTACTTGAGCTCAGGAGTTT AACATCAGCCTGGGCAACATAGCAGGACCCCATCTCTACTATTTAAAACATAAAAACAAAAATAAATAAATATATGTATATGTGGGGACA GGGAGTATGTGAGAAATTTCTGTACTTTCCCTTCAATTTTGCTATGAATCCAAAACTGCTTCAAAAAATAATAAAGCCTTAAAAAATTTT >In-frame_ENST00000268896_ENST00000398391_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(amino acids)=157AA_start in transcript=89_stop in transcript=562 MPSRRRSPDCGRMELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKALNYLGIQPTKEQHQALRQQVQADSKGTVSF -------------------------------------------------------------- >In-frame_ENST00000576183_ENST00000299341_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(transcript)=481nt_BP=184nt CCGCGGCCTGCCCTCCAGGCGGAGGAGCCCGGACTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGC CTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGA CAAGGCTCTAAATTATCTTGGTATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGT GTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATAT ATTAGATTCACAGCTTCTTCCTTGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGT >In-frame_ENST00000576183_ENST00000299341_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(amino acids)=158AA_start in transcript=7_stop in transcript=480 MPSRRRSPDCGRMELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKALNYLGIQPTKEQHQALRQQVQADSKGTVSF -------------------------------------------------------------- >In-frame_ENST00000576183_ENST00000376352_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(transcript)=5554nt_BP=184nt CCGCGGCCTGCCCTCCAGGCGGAGGAGCCCGGACTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGC CTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGA CAAGGCTCTAAATTATCTTGGTATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGT GTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATAT ATTAGATTCACAGCTTCTTCCTTGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGT AAATACACTTAAGGAAAAATTATTGGAATCAGATAAGCAAAGGAAACAATTGACAGAAGAGCTCCAGAATGTGAAACAAGAAGCCAAAGC TGTAGTTGAAGAAACAAGAGCCCTGCGTAGTCGGATTCATCTTGCTGAAGCTGCTCAGAGACAGGCACATGGAATGGAAATGGACTATGA AGAAGTGATCCGTCTGTTAGAGGCCAAGATTACAGAGCTAAAGGCTCAGCTTGCTGATTATTCTGACCAAAATAAAGAAAGTGTTCAGGA TTTAAAAAAGAGAATCATGGTACTCGACTGCCAATTACGAAAATCAGAAATGGCTCGAAAAACTTTTGAGGCATCCACTGAAAAGCTTCT TCATTTTGTAGAGGCTATTCAAGAAGTATTTTCTGATAATTCTACTCCTTTATCAAATTTAAGTGAAAGAAGAGCTGTGTTAGCTTCTCA GACTTCCCTCACACCACTGGGAAGGAATGGACGTAGCATCCCAGCAACGCTGGCGCTTGAATCTAAGGAACTTGTTAAATCTGTTCGTGC CTTACTTGATATGGATTGTTTACCTTATGGGTGGGAGGAAGCTTACACAGCAGATGGAATCAAGTACTTCATCAATCATGTAACACAGAC TACATCCTGGATCCATCCCGTGATGAGTGTCCTGAATCTATCTCGCTCAGAGGAGAATGAAGAGGATTGCTCTAGAGAACTCCCCAACCA GAAAAGTTGATGGTTTTCCTTAGGAAGTGGAGCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACAGTCTA AAATAGGAGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGTATTTTTGTAAAACTTTTGATATTTCTGTA TACATTTAAAAAATCAATTGCCACTACAGTAGTTCCTTAAGAATAATCTAGTTATATTTTTTGAAATCACATATAATTAGACTTTATAAT ATATATACTTTTTCATATATAATTAGATCTTTCTTTGTAATTTCATATGTAGTTCTTCATAGGGTCTCAGATACAATGGTTTTTATAATT GACATATTGAAAAAGTATATGAACATAATGAAACACCTCATTTATTTGATAATTCACTAATGTTTTATATTCATATATTAGGAAAGTGAA CTTAGCAAGCTTTTTGGAATTTAAGGATCACATTTAGACATCTCATGGGCTGATGAATACAGCTGGTATCTTTGTGGAGCTTTCTAATTT ACAAAATGCTTTGTAGACCCCATTGTCTTTAAACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAGT AGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAGACTCACTCCTAAGTCTTCTGATTCCATGAGCAGTCCCCCTTC CCCCATACCCTGCTGTCTCCACGGAGGGAGGTCACAGCCCATCACGCAGGACACTGTGATTGTGTTGATGCAGCTGGCTCCACAGCTGTG CATTCCACAGAGATTCAGAAGGCACCTCTTCGGTCAAACATGGCCCCTCTATAACCCCACTATTCTTCTCCTATAAACCCTTCCCCCTTC TCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTTCTTTCAGCAGCTCGTGTTTTTCTAAAGTGAA AGGCATGGTTTGTCCTGCTTAGGTTGCCCTTCCCAGAGGGATGGTTTGAGGGGAGCTGATGAGAAGAGAGGTATCTGTTAAAACATTACT GCTCTACTCGAAACAAGATGGAAGCCTAAAGCCCAAGTCGAGCAGCTCCCAGCACTGCTGTGCAGACCTAGAGGTCCTTAGAACATAGTC TAAGAACCATTCATTGTAGCCATTTTATAGTTGAGTAAACTGAGATCTTAAGTCTCCTAGTCTACTGAATTTCATATGGTGTATAATACA GATTTATATGGTAAAGATATACATATACATTGTGCTCAACTATACATTCCTGAATCCATTTAGGATTTGTGATTTATGTCTTGAGTAATA ATATAAAGTCAACTCCAGACTGATAGGTAGTCATTAGCCATGAGAAATGTTTCAGGATGGCTAGGGAAGACTTGTGTTTTGCCTGACAGC CATTTGAATGTTAGGAAGCTTCGGGGAGACAAGTTTTGAGAGAAGCCCCAGAGGGAGCTATTTCCTTGCACCCCCCAGAGGTGAATGAGG TATTCTATAAGTTAGTGTCTATAATTGTGAAAGTACAAACTTCTTGTTTTTGTCAAATTAATGGTATGAAATTTCTCTCCCCCTGCTTGA AGAGTTTTCTAATTCGTTTCTAGTGAGCAAAACAAAGAAGGTGCTTGAGTCACTGAAATCAAAGTACTCAGGCACACAGCCCACTGACAA GAGACACCTCATCCATTAACTGCTGTTTTGTACCACTTGCCGCCCTGTTTCTGTCAAATACCTAGTGAAAAAGGCCTAAACAATTGTAAT GATATTATTTATTGGGCATTTTGTGCCATACATGGTGATGAGCAGTTTGCATATATTTATTTATGATCTTCTTAAAACCATTCCATGAAA TAGGAACTGTAATTATCCCCAATTCTAAAAGAAAAAACTTAGTTTTAGAGAGTTAGTAATCTTTGCCTAAGGGTCACAAAGCACCTATGT GTAGAAGCTAGGGTTCAAGGCAGATCTGTGATTCCAGAAGCTGTTCTCTAAACCACTATGGAGAACTGCTTAGATTCATTGTCTATGGGT ACATTTTATAAAAAGGCAGATTCTAGTTCAGTGTCATAAGGAACTTTCTAGTAATTAGAGCTGATAAGAAAAGAATTCCCCAGGAGAAAA TGGAAACACTATCCCAGCAATCTGAATTCCTTACTTGGGGAATGTTGCTGAGGAGGTTCAGTGTGTGAATGGACTGAACCAGTTGGCCAC TCTCTCAGATTCCCTCTTCATAAAGCTTCCGTGACTTCTAAACCATCAGGTCGGTGCCATAAGAGATGCTCAAAAAAGCATGGTCAGGGC TTAGCAAGAATCCTTTTCCAGTGCAAATACGACCCTCATATTATGTTTTGGCGAGTAGCCAGTCTTTCTTTAACATCAATCAACCGTAGC AATGTGGTCATCACGAAGTCTTCATTGACTCACTGGCTTGGATTTTAGGGTTAGAAAATCTGAATGTTCTTATGTCCTTCCGTCTCACTT TACTAGAGTGCCCAAGTTGACTCATCCTTACTCACTCATTCCCTCAAAATATTTATTGAGCACCAACAATGTCACAAGCACTGTGCTAAA CACTGTGGTGAAGTAGAACAATTGCTAATCATTTCCTGGGTTCCACTTACTCTTGATTTAAAAAAAAAAAAACAACAAAAGAGTTTGTGT GTGGCCAGGACTAAACAGCTGCTTCTTAATTTTTGAATTTTAAAACTAATCTATTTTATTTAAAAAAAATCAAGTACTTTGGAAGTGAAT AAAGTAAGAGATAGCCTGTCTCACTTTCCAGAGGTAGCAGTCACTAATACTGTGGTGAGTGATTTTACTCAAAGGAAATCACACTATTAA GCAGCTTGGTTTTGACATGTTATGTTGTGGTCATCTTTTCATGTCAATACATAGATTAATCTTTTATTTCAAATGTCTACATAAAATATC ACTACCCACATAACCTATAATTTGTGTGGCCAGCAATTTATTGAACACTAAAATGTTTTAAGTTTTCTTATTGCTAACAATGTCACAGTG AACATTTATATATTCATTAAATCCTTTTCCTCATGTATCTTTGCACTCTTGTGCTAGTATGTCTATAGTGTGAATACATTCATAAATTTC TTGATCAAAGCTAGGTCAAAGTTACATTCATTTTAATTTTGGTACATATCCATAAATTCTCCATAAAAGTAGGACCAACTTACATTACCA CCAATAGTGTATGTGAGCCTTATTTTTATGTATGATAGGACTTTTTTTAGTCCAAATGTTCCTATAGATTTTCTGGGTTTTTTTTTTTTT TTTGTCCTTGGAAGAATAACCTTCCTTCCACCAAGTCCAAGAACCTGAGATTTTTAATCATTAGGTTTTAGATTTCCTTTAGCAGCAGAG ACTGACTTGCTGTATAGAGGGAAGTCAAGTAGTGACTAACTCACTATATGTCAAACACATCATTACTCTTCTCTTTTCCTACTTTACATG TAATGGTTGCGAGGACCAACTTTCAAATGAGCTAACTTGGGTGAGACGTTCACTAAAGTACCAAGCACAATACAAATGCATCTTCGAGTT CTTTGGGCCTCACTTTCCCTATCTGAATAATAAGGATAGTAATCCCTTGCCTTTTCTCAAACCAGTTCAACTCAGCAAACACTTCCTGAG CACCTGCTACATGCCAGGCAAAATGTGAAATTTGCATGCTATGAGGCTAAATGGTACTGATTCTCAAAACAAGGAGCTCATAGTCTAAAA CCATTTTTCTTTCTTTTTTTTCCCCCTAAACAACCTCTTAAAGGGGTAAGAAGTTAGGGGGTTGTTTATTAAGAACCCCTGAAGAGCAAC CCTTTACCACTCTCTTAAATTTGAAAAATTCCAAAATAATATTAACACCTCTTGACTAGAAAAGGAAAAAAAAGGAACATGCCGTATGAA GAGCCTCTCCAATAATAAATGCAAAGCAGCTGTCAAAATATAGAGTCAAGTGATACTTTCATAAAGTGTTTGCACAATTAGAAAATGTTA TCCTTTTTCTCGGGAGAAATGGGACATTTTTATTTTCTCTGCTAAGTGAAATGCAACTTTTTGAAGAATCAACACGCTTGACATTTTTAC AATGTACATAAAGAACTGAACTATTATTAAAACAACTTACACACTCCATTGCTTATAACTTTTGAGAGAATGAAAAGAACCTTAAACAGA ATGTGCCTGTGGAGCTTCGCTTTAGAAATGAAATACCCAAGGTGTTTTAACTACAACTGTCTACATGTAATAGTGTGTCTGCATAATGAC >In-frame_ENST00000576183_ENST00000376352_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(amino acids)=390AA_start in transcript=7_stop in transcript=1179 MPSRRRSPDCGRMELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKALNYLGIQPTKEQHQALRQQVQADSKGTVSF GDFVQVARNLFCLQLDEVNVGAHEISNILDSQLLPCDSSEADEMERLKCERDDALKEVNTLKEKLLESDKQRKQLTEELQNVKQEAKAVV EETRALRSRIHLAEAAQRQAHGMEMDYEEVIRLLEAKITELKAQLADYSDQNKESVQDLKKRIMVLDCQLRKSEMARKTFEASTEKLLHF VEAIQEVFSDNSTPLSNLSERRAVLASQTSLTPLGRNGRSIPATLALESKELVKSVRALLDMDCLPYGWEEAYTADGIKYFINHVTQTTS -------------------------------------------------------------- >In-frame_ENST00000576183_ENST00000405898_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(transcript)=1628nt_BP=184nt CCGCGGCCTGCCCTCCAGGCGGAGGAGCCCGGACTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGC CTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGA CAAGGCTCTAAATTATCTTGGTATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGT GTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATAT ATTAGATTCACAGCTTCTTCCTTGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGT AAATACACTTAAGTGGCCAGGGCAGAATTAGATGAAGAGCCAATAAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAAT ACATTTTTTTTCATGTGCAGGGCTATTCTTAAGGGACATCATGTTTTGCTAACGTAATTTGGAATTAATATTATTTTAGAGAGGAAAAAA ACACACATATCCCAAATATACTGTAACATTTTTCTTCTCTTTTTTTGTTTGTTTGGTTTTTTGATTCTTGTTTTTGTTTTGTGTTTTTGA GACAGGGTCGCACTCTGTCGCCCAGGCTGGAGTGCAATACTGCAATCACGTCTCACTGCAGCCTCAACCTCCTGGGTTCAAGTGATTCTC CCACCTCAACCTCCCAAGTAACTGGGACAACATGTCCATGCCACCATGCTCAACTAATTTTTTTTTAAATTTTTATTTTGTAGAGATGGT GTCTCACTATTTTGTTCAGACTGGTCTCAAACACCTGGGCTCAAATGACCCACCTACCTCAGCCTCTCAAAGTGCTGGGATTACAGGTGT GAGCCACCATGTCTGGCCTTGATTCTCTTTATGTGGTTTCATTCTGTTTTTAGAAGAATATTACATTTAAATTATATCCTAATTTTTATA GAAAGCTATATTTTCCAAATCTTTAGGAAAAGCAACATAACTACTTGATTTACCACTAATTCGTCATAGGCACATATTTTTAAAATTATT TTATTAAATAAGGTATAGTATATTGATAATTATTTAATTTTTATTAAATAGAAAATATTTACACCAAAAGGAAAGAAAATTTGTTTTGCT ACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATATATTATTTATCTTTTCATAGATTTTTCTCTACACAGAAAA TTATATTTTTTAAAAATAGGCAGGGCATGATGGCTGACACCTTTAATCGCAGTACTTTGGGAGGCTGAGGCAAGAGGATTACTTGAGCTC AGGAGTTTAACATCAGCCTGGGCAACATAGCAGGACCCCATCTCTACTATTTAAAACATAAAAACAAAAATAAATAAATATATGTATATG TGGGGACAGGGAGTATGTGAGAAATTTCTGTACTTTCCCTTCAATTTTGCTATGAATCCAAAACTGCTTCAAAAAATAATAAAGCCTTAA >In-frame_ENST00000576183_ENST00000405898_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(amino acids)=157AA_start in transcript=7_stop in transcript=480 MPSRRRSPDCGRMELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKALNYLGIQPTKEQHQALRQQVQADSKGTVSF -------------------------------------------------------------- >In-frame_ENST00000576183_ENST00000434978_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(transcript)=2129nt_BP=184nt CCGCGGCCTGCCCTCCAGGCGGAGGAGCCCGGACTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGC CTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGA CAAGGCTCTAAATTATCTTGGTATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGT GTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATAT ATTAGATTCACAGCTTCTTCCTTGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGT AAATACACTTAAGGAAGCCAAAGCTGTAGTTGAAGAAACAAGAGCCCTGCGTAGTCGGATTCATCTTGCTGAAGCTGCTCAGAGACAGGC ACATGGAATGGAAATGGACTATGAAGAAGTGATCCGTCTGTTAGAGGCCAAGATTACAGAGCTAAAGGCTCAGCTTGCTGATTATTCTGA CCAAAATAAAGAAAGTGTTCAGGATTTAAAAAAGAGAATCATGGTACTCGACTGCCAATTACGAAAATCAGAAATGGCTCGAAAAACTTT TGAGGCATCCACTGAAAAGCTTCTTCATTTTGTAGAGGCTATTCAAGAAGTATTTTCTGATAATTCTACTCCTTTATCAAATTTAAGTGA AAGAAGAGCTGTGTTAGCTTCTCAGACTTCCCTCACACCACTGGGAAGGAATGGACGTAGCATCCCAGCAACGCTGGCGCTTGAATCTAA GGAACTTGTTAAATCTGTTCGTGCCTTACTTGATATGGATTGTTTACCTTATGGGTGGGAGGAAGCTTACACAGCAGATGGAATCAAGTA CTTCATCAATCATGTAACACAGACTACATCCTGGATCCATCCCGTGATGAGTGTCCTGAATCTATCTCGCTCAGAGGAGAATGAAGAGGA TTGCTCTAGAGAACTCCCCAACCAGAAAAGTTGATGGTTTTCCTTAGGAAGTGGAGCTACATGGATGATGTGAGCAGAGACGCATAACAT CCAATTCTGAGATGAAACAGTCTAAAATAGGAGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGTATTTT TGTAAAACTTTTGATATTTCTGTATACATTTAAAAAATCAATTGCCACTACAGTAGTTCCTTAAGAATAATCTAGTTATATTTTTTGAAA TCACATATAATTAGACTTTATAATATATATACTTTTTCATATATAATTAGATCTTTCTTTGTAATTTCATATGTAGTTCTTCATAGGGTC TCAGATACAATGGTTTTTATAATTGACATATTGAAAAAGTATATGAACATAATGAAACACCTCATTTATTTGATAATTCACTAATGTTTT ATATTCATATATTAGGAAAGTGAACTTAGCAAGCTTTTTGGAATTTAAGGATCACATTTAGACATCTCATGGGCTGATGAATACAGCTGG TATCTTTGTGGAGCTTTCTAATTTACAAAATGCTTTGTAGACCCCATTGTCTTTAAACCATACAACATGCCCGTGAAGCTGATCTGGTGG GTATGTTTATTCTTGGTTTTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAGACTCACTCCTAAGTCTTC TGATTCCATGAGCAGTCCCCCTTCCCCCATACCCTGCTGTCTCCACGGAGGGAGGTCACAGCCCATCACGCAGGACACTGTGATTGTGTT GATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTTCGGTCAAACATGGCCCCTCTATAACCCCACTATTCT TCTCCTATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTTCTTTCAG >In-frame_ENST00000576183_ENST00000434978_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(amino acids)=368AA_start in transcript=7_stop in transcript=1113 MPSRRRSPDCGRMELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKALNYLGIQPTKEQHQALRQQVQADSKGTVSF GDFVQVARNLFCLQLDEVNVGAHEISNILDSQLLPCDSSEADEMERLKCERDDALKEVNTLKEAKAVVEETRALRSRIHLAEAAQRQAHG MEMDYEEVIRLLEAKITELKAQLADYSDQNKESVQDLKKRIMVLDCQLRKSEMARKTFEASTEKLLHFVEAIQEVFSDNSTPLSNLSERR AVLASQTSLTPLGRNGRSIPATLALESKELVKSVRALLDMDCLPYGWEEAYTADGIKYFINHVTQTTSWIHPVMSVLNLSRSEENEEDCS -------------------------------------------------------------- >In-frame_ENST00000576183_ENST00000398391_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(transcript)=1628nt_BP=184nt CCGCGGCCTGCCCTCCAGGCGGAGGAGCCCGGACTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGC CTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGA CAAGGCTCTAAATTATCTTGGTATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGT GTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATAT ATTAGATTCACAGCTTCTTCCTTGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGT AAATACACTTAAGTGGCCAGGGCAGAATTAGATGAAGAGCCAATAAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAAT ACATTTTTTTTCATGTGCAGGGCTATTCTTAAGGGACATCATGTTTTGCTAACGTAATTTGGAATTAATATTATTTTAGAGAGGAAAAAA ACACACATATCCCAAATATACTGTAACATTTTTCTTCTCTTTTTTTGTTTGTTTGGTTTTTTGATTCTTGTTTTTGTTTTGTGTTTTTGA GACAGGGTCGCACTCTGTCGCCCAGGCTGGAGTGCAATACTGCAATCACGTCTCACTGCAGCCTCAACCTCCTGGGTTCAAGTGATTCTC CCACCTCAACCTCCCAAGTAACTGGGACAACATGTCCATGCCACCATGCTCAACTAATTTTTTTTTAAATTTTTATTTTGTAGAGATGGT GTCTCACTATTTTGTTCAGACTGGTCTCAAACACCTGGGCTCAAATGACCCACCTACCTCAGCCTCTCAAAGTGCTGGGATTACAGGTGT GAGCCACCATGTCTGGCCTTGATTCTCTTTATGTGGTTTCATTCTGTTTTTAGAAGAATATTACATTTAAATTATATCCTAATTTTTATA GAAAGCTATATTTTCCAAATCTTTAGGAAAAGCAACATAACTACTTGATTTACCACTAATTCGTCATAGGCACATATTTTTAAAATTATT TTATTAAATAAGGTATAGTATATTGATAATTATTTAATTTTTATTAAATAGAAAATATTTACACCAAAAGGAAAGAAAATTTGTTTTGCT ACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATATATTATTTATCTTTTCATAGATTTTTCTCTACACAGAAAA TTATATTTTTTAAAAATAGGCAGGGCATGATGGCTGACACCTTTAATCGCAGTACTTTGGGAGGCTGAGGCAAGAGGATTACTTGAGCTC AGGAGTTTAACATCAGCCTGGGCAACATAGCAGGACCCCATCTCTACTATTTAAAACATAAAAACAAAAATAAATAAATATATGTATATG TGGGGACAGGGAGTATGTGAGAAATTTCTGTACTTTCCCTTCAATTTTGCTATGAATCCAAAACTGCTTCAAAAAATAATAAAGCCTTAA >In-frame_ENST00000576183_ENST00000398391_TCGA-AH-6643-11A_PCTP_chr17_53828605_+_STXBP4_chr17_53108528_length(amino acids)=157AA_start in transcript=7_stop in transcript=480 MPSRRRSPDCGRMELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKALNYLGIQPTKEQHQALRQQVQADSKGTVSF -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for PCTP-STXBP4 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for PCTP-STXBP4 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for PCTP-STXBP4 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | STXBP4 | C0006142 | Malignant neoplasm of breast | 1 | CTD_human |
Tgene | STXBP4 | C0678222 | Breast Carcinoma | 1 | CTD_human |
Tgene | STXBP4 | C1257931 | Mammary Neoplasms, Human | 1 | CTD_human |
Tgene | STXBP4 | C1458155 | Mammary Neoplasms | 1 | CTD_human |
Tgene | STXBP4 | C4704874 | Mammary Carcinoma, Human | 1 | CTD_human |